AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0524330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524330 MtrunA17_Chr3g0145681 89.673 397 20 6 6 395 3 385 0.0 645
Msa0524330 MtrunA17_Chr1g0211071 47.887 426 165 16 9 394 12 420 4.24e-106 319
Msa0524330 MtrunA17_Chr8g0381111 27.442 215 133 8 111 315 204 405 5.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524330 AT4G35110.1 31.450 407 228 16 9 395 11 386 7.11e-38 141
Msa0524330 AT4G35110.2 31.450 407 228 16 9 395 11 386 7.11e-38 141
Msa0524330 AT4G35110.6 31.450 407 228 16 9 395 11 386 7.11e-38 141
Msa0524330 AT4G35110.5 31.450 407 228 16 9 395 11 386 7.11e-38 141
Msa0524330 AT4G35110.3 31.450 407 228 16 9 395 26 401 8.40e-38 141
Msa0524330 AT4G35110.4 31.450 407 228 16 9 395 23 398 1.15e-37 140
Msa0524330 AT2G16900.5 39.521 167 94 2 206 371 196 356 1.06e-33 129
Msa0524330 AT2G16900.6 39.521 167 94 2 206 371 196 356 1.06e-33 129
Msa0524330 AT2G16900.1 39.521 167 94 2 206 371 196 356 1.06e-33 129
Msa0524330 AT2G16900.3 39.521 167 94 2 206 371 107 267 1.73e-33 127
Msa0524330 AT2G16900.4 39.521 167 94 2 206 371 107 267 1.73e-33 127
Msa0524330 AT2G16900.2 39.521 167 94 2 206 371 107 267 1.73e-33 127
Msa0524330 AT2G16900.7 39.521 167 94 2 206 371 107 267 1.73e-33 127
Msa0524330 AT2G20960.1 31.892 185 122 3 211 394 557 738 2.93e-27 114
Msa0524330 AT2G20960.4 31.892 185 122 3 211 394 557 738 2.93e-27 114
Msa0524330 AT4G38550.3 32.738 168 112 1 205 371 416 583 3.58e-27 114
Msa0524330 AT4G38550.1 32.738 168 112 1 205 371 416 583 3.58e-27 114
Msa0524330 AT4G38550.2 32.738 168 112 1 205 371 453 620 3.63e-27 114
Msa0524330 AT4G38550.5 32.738 168 112 1 205 371 315 482 4.20e-27 113
Msa0524330 AT2G20960.2 31.892 185 122 3 211 394 522 703 4.20e-27 114
Msa0524330 AT4G38550.4 32.738 168 112 1 205 371 357 524 4.34e-27 113
Msa0524330 AT2G20960.3 31.892 185 122 3 211 394 487 668 4.46e-27 114
Msa0524330 AT4G38560.2 38.272 162 99 1 211 371 332 493 4.51e-26 110
Msa0524330 AT4G38560.1 38.272 162 99 1 211 371 330 491 5.00e-26 110
Msa0524330 AT5G11140.1 34.270 178 113 3 218 394 57 231 1.46e-25 104
Msa0524330 AT2G20950.1 33.540 161 106 1 212 371 332 492 2.85e-21 95.9
Msa0524330 AT2G20950.4 33.540 161 106 1 212 371 334 494 3.03e-21 95.9
Msa0524330 AT2G20950.2 33.540 161 106 1 212 371 315 475 3.37e-21 95.9
Msa0524330 AT2G20950.3 33.540 161 106 1 212 371 317 477 3.73e-21 95.5
Msa0524330 AT2G20950.6 33.540 161 106 1 212 371 286 446 4.51e-21 95.1
Msa0524330 AT2G20950.8 33.540 161 106 1 212 371 359 519 4.52e-21 95.5
Msa0524330 AT2G20950.14 33.540 161 106 1 212 371 288 448 4.59e-21 95.1
Msa0524330 AT2G20950.5 33.540 161 106 1 212 371 196 356 4.71e-21 94.4
Msa0524330 AT2G20950.9 33.540 161 106 1 212 371 196 356 4.71e-21 94.4
Msa0524330 AT2G20950.7 32.941 170 113 1 203 371 350 519 5.59e-21 95.1
Msa0524330 AT2G20950.13 32.941 170 113 1 203 371 306 475 1.08e-20 94.4
Msa0524330 AT2G20950.10 32.941 170 113 1 203 371 306 475 1.08e-20 94.4
Msa0524330 AT2G20950.12 32.941 170 113 1 203 371 272 441 1.23e-20 94.0
Msa0524330 AT2G20950.11 32.941 170 113 1 203 371 216 385 1.49e-20 93.2

Find 168 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCCCAATCGGAGATTT+TGG 0.127715 3_4:-77813024 Msa0524330:three_prime_UTR
AAGATCAATATGTCATTAAT+TGG 0.195712 3_4:-77816893 Msa0524330:three_prime_UTR
CTCAAACGATCTCTGATTTC+AGG 0.204618 3_4:+77817312 None:intergenic
TGATAAGGATTGGATGATTT+AGG 0.249464 3_4:+77818754 None:intergenic
GTTTGGTTCCCTTTGTCTTT+TGG 0.250491 3_4:+77818866 None:intergenic
CTTGACAAGTATGGTGATAT+TGG 0.252220 3_4:-77817684 Msa0524330:CDS
GCCAGAGAAACTAAAATCTT+TGG 0.259330 3_4:+77817848 None:intergenic
TCAGGAATGGATTTGGCTAT+TGG 0.267801 3_4:+77816820 None:intergenic
CGGAAGAAGATTGTAATTCT+TGG 0.286432 3_4:+77817595 None:intergenic
CCATCCTTAACTTGATCTTT+AGG 0.299650 3_4:+77817981 None:intergenic
CTTGAGCAGCTCATGTCTTC+AGG 0.305135 3_4:-77817285 Msa0524330:CDS
GCCTTCTCTGTGTACTTTGT+AGG 0.306411 3_4:-77812720 Msa0524330:three_prime_UTR
ATTGATTATTGTAGGCTTCA+TGG 0.307859 3_4:+77813091 None:intergenic
AGAATAAGATTGATTATTGT+AGG 0.309019 3_4:+77813083 None:intergenic
CACTTGATATTCTTGATGCT+TGG 0.311559 3_4:+77813213 None:intergenic
TCATCTCTAATCTTCCCTTT+AGG 0.311796 3_4:-77813253 Msa0524330:three_prime_UTR
AATACATTACTCAATAAAAT+TGG 0.312289 3_4:-77817081 Msa0524330:three_prime_UTR
AATTGGATTGGTTTGAATAC+TGG 0.313900 3_4:+77813161 None:intergenic
GATGCCAATTGCAACAATTC+AGG 0.316155 3_4:-77818724 Msa0524330:intron
TACAATGTCAAAGAAAGTTT+TGG 0.326292 3_4:-77817726 Msa0524330:CDS
AGGGGTTGGGTGTGGGAGCT+TGG 0.329501 3_4:-77812749 Msa0524330:three_prime_UTR
AAGTAGGATACGCGGGTAAT+TGG 0.334242 3_4:+77816781 None:intergenic
GTTTCATCAGAATTGGTTAC+TGG 0.334578 3_4:+77817885 None:intergenic
GAAGAAAAGAAATGCAAGTT+TGG 0.336047 3_4:+77817201 None:intergenic
TTGACAAGTATGGTGATATT+GGG 0.341155 3_4:-77817683 Msa0524330:CDS
ACCATGGAGGAGTCAATAAA+TGG 0.345511 3_4:-77819197 None:intergenic
AATAATAGAAAGGTTATTAA+TGG 0.347675 3_4:-77818808 Msa0524330:CDS
TTCACCAGTTTCATCAGAAT+TGG 0.348026 3_4:+77817878 None:intergenic
TGATTTATGATGAGAAGAAT+TGG 0.356868 3_4:+77813144 None:intergenic
GATGAGATCATTCCTTCTTC+TGG 0.358336 3_4:-77818138 Msa0524330:CDS
CTTCTTCCTATGATCAATCT+TGG 0.363222 3_4:+77818236 None:intergenic
ACAGATCGACCAAATACTTT+TGG 0.365016 3_4:+77817022 None:intergenic
ATCTGAAATCGAAAACGAAT+TGG 0.366745 3_4:+77812775 None:intergenic
ACTTGTCAAGTATTGTTTGT+AGG 0.367480 3_4:+77817697 None:intergenic
GATTTATGAGAAGATTTATT+CGG 0.368193 3_4:+77813308 None:intergenic
ATGTGTAATTGAGCAGAAAT+TGG 0.373749 3_4:+77818114 None:intergenic
ACAATCGGCGCCGGAAAATT+CGG 0.376572 3_4:+77812963 None:intergenic
CAAACAATACTTGACAAGTA+TGG 0.386291 3_4:-77817693 Msa0524330:CDS
ACTTGATATTCTTGATGCTT+GGG 0.388106 3_4:+77813214 None:intergenic
TCTGAATCCCGTGTTTCAAT+TGG 0.388960 3_4:-77817753 Msa0524330:CDS
GTCGTCCTCCGTGGCACAAT+CGG 0.392241 3_4:+77812948 None:intergenic
GATCTCTGATTTCAGGAATT+CGG 0.392697 3_4:+77817319 None:intergenic
TATTGGGGCAAGCTGTGATT+TGG 0.400285 3_4:-77817667 Msa0524330:CDS
GACCAAAGTGAGTGAATTGT+TGG 0.402832 3_4:-77817559 Msa0524330:CDS
GATTAGTCACCATCAGGATA+TGG 0.405327 3_4:-77817451 Msa0524330:CDS
TGATCTATCTTTGACTTGAT+AGG 0.411943 3_4:+77817237 None:intergenic
GGAACCTGAATTGTTGCAAT+TGG 0.412011 3_4:+77818720 None:intergenic
GGCTAACTATGATCTTGAAA+TGG 0.413633 3_4:-77817418 Msa0524330:CDS
GTAACCAATTCTGATGAAAC+TGG 0.417672 3_4:-77817882 Msa0524330:CDS
ATCTTCCCTTTAGGTCCCAT+TGG 0.420949 3_4:-77813244 Msa0524330:three_prime_UTR
ATGGAAGAAGAAGGTCTTGA+TGG 0.423516 3_4:+77813337 None:intergenic
ACAACTCATGACGTTGGTTC+TGG 0.424708 3_4:+77816861 None:intergenic
TGAATTGTTGGATATTGTTA+AGG 0.426225 3_4:-77817547 Msa0524330:CDS
GGGAAGATTAGAGATGAAGT+TGG 0.431054 3_4:+77813259 None:intergenic
TACCTCCTTCCCATATCATT+CGG 0.432343 3_4:+77812627 None:intergenic
ATTACACATCCCAGATGTTA+TGG 0.434766 3_4:-77818100 Msa0524330:intron
GGTGGAACACTTTGAAGAAC+AGG 0.435930 3_4:+77818192 None:intergenic
AGGGACAGTACCATAACATC+TGG 0.436687 3_4:+77818090 None:intergenic
ATGCTTGGGCAGGGCACCAA+TGG 0.438660 3_4:+77813228 None:intergenic
AGCAGCAACATGATGTGGTT+TGG 0.440038 3_4:+77818849 None:intergenic
ATGTTCAATTGCAGCTATGA+AGG 0.441304 3_4:-77812485 Msa0524330:three_prime_UTR
TCACCATCAGGATATGGAAA+TGG 0.446433 3_4:-77817445 Msa0524330:CDS
ATGTTGATGATGAAGATTGT+TGG 0.449401 3_4:-77812458 Msa0524330:three_prime_UTR
CATGGAGTGTGTATGCTTTG+TGG 0.449719 3_4:-77817619 Msa0524330:CDS
TTGGCATCACACTTATGATA+AGG 0.450367 3_4:+77818739 None:intergenic
GCAGAGAATCGAAGATGAAA+AGG 0.459920 3_4:-77812811 Msa0524330:three_prime_UTR
GATATTCTTGATGCTTGGGC+AGG 0.464022 3_4:+77813218 None:intergenic
TAGTATCTATTTCTTTGTTG+TGG 0.469830 3_4:+77817811 None:intergenic
TGAATTGATTAGTCACCATC+AGG 0.473279 3_4:-77817457 Msa0524330:CDS
GGAAGATTAGAGATGAAGTT+GGG 0.473382 3_4:+77813260 None:intergenic
ATCCAACAATTCACTCACTT+TGG 0.473716 3_4:+77817557 None:intergenic
AATGAATTGAGAAAGATTGA+AGG 0.474070 3_4:+77819163 None:intergenic
TATAGAAAGACTTTCTATAC+AGG 0.482578 3_4:+77816925 None:intergenic
TCTTTGTTGTGGAGAGGAAG+GGG 0.483390 3_4:+77817822 None:intergenic
TGCTTGGGCAGGGCACCAAT+GGG 0.484157 3_4:+77813229 None:intergenic
TTTGGTCTTACTTATTGAAT+CGG 0.484588 3_4:+77817575 None:intergenic
TATGATGAGAAGAATTGGAT+TGG 0.485063 3_4:+77813149 None:intergenic
GCAGCCTAAAGATCAAGTTA+AGG 0.486423 3_4:-77817985 Msa0524330:CDS
CTTACAACAATTAATTAGCT+AGG 0.492403 3_4:+77819070 None:intergenic
GTCAAGTATTGTTTGTAGGA+TGG 0.493819 3_4:+77817701 None:intergenic
GCTTGAGTGCATTGATGGTA+AGG 0.495066 3_4:+77818895 None:intergenic
AGGGCACCAATGGGACCTAA+AGG 0.495079 3_4:+77813238 None:intergenic
TTCTTTGTTGTGGAGAGGAA+GGG 0.496215 3_4:+77817821 None:intergenic
TGTGTAATTGAGCAGAAATT+GGG 0.497868 3_4:+77818115 None:intergenic
TGGTCCCAAAATCTCCGATT+GGG 0.498795 3_4:+77813019 None:intergenic
CTTTGAAGAACAGGAGGTTG+TGG 0.499804 3_4:+77818201 None:intergenic
TCAGGATATGGAAATGGAAA+AGG 0.500818 3_4:-77817439 Msa0524330:CDS
TTTCTTTGTTGTGGAGAGGA+AGG 0.502763 3_4:+77817820 None:intergenic
CTCCGTGGCACAATCGGCGC+CGG 0.503510 3_4:+77812954 None:intergenic
GAAATAGATACTAGTAGCGA+AGG 0.504275 3_4:-77817801 Msa0524330:CDS
AGAACAGCTAGAATCAGAGT+TGG 0.506724 3_4:-77817385 Msa0524330:CDS
TTTCCATTTCCATATCCTGA+TGG 0.507099 3_4:+77817442 None:intergenic
TCTAAGAAGAAGTATGATGA+GGG 0.507225 3_4:-77812416 Msa0524330:three_prime_UTR
TAAAACTGAAACAAAGAAAG+AGG 0.508090 3_4:-77817937 Msa0524330:CDS
GCAGAAATTGGGCCAGAAGA+AGG 0.508734 3_4:+77818126 None:intergenic
ATATTCTTGATGCTTGGGCA+GGG 0.508973 3_4:+77813219 None:intergenic
CTCATTCCAAGATTGATCAT+AGG 0.510237 3_4:-77818242 Msa0524330:CDS
AGCAAGCTTGAGTGCATTGA+TGG 0.510384 3_4:+77818890 None:intergenic
CAGCAGTTGTTCATCCCAAT+CGG 0.511774 3_4:-77813033 Msa0524330:three_prime_UTR
CGATTGGGATGAACAACTGC+TGG 0.514311 3_4:+77813034 None:intergenic
AAATTGGATGCAAGCAACAT+AGG 0.517141 3_4:-77817065 Msa0524330:three_prime_UTR
GAAGAAAGAACGATGGAAAG+TGG 0.519653 3_4:+77819125 None:intergenic
ATCACACTTATGATAAGGAT+TGG 0.522199 3_4:+77818744 None:intergenic
AAACCACATCATGTTGCTGC+TGG 0.525538 3_4:-77818847 Msa0524330:CDS
ATGAATTGAGAAAGATTGAA+GGG 0.528679 3_4:+77819164 None:intergenic
AAGATTTATTCGGTTTCGAA+TGG 0.528741 3_4:+77813318 None:intergenic
GGGCACCAATGGGACCTAAA+GGG 0.528983 3_4:+77813239 None:intergenic
GGTGATTCTTACTATACACT+TGG 0.531558 3_4:+77812999 None:intergenic
TTCCGGCGCCGATTGTGCCA+CGG 0.532236 3_4:-77812956 Msa0524330:three_prime_UTR
TTGGTCCCAAAATCTCCGAT+TGG 0.536870 3_4:+77813018 None:intergenic
CGGTTTCGAATGGAAGAAGA+AGG 0.539205 3_4:+77813328 None:intergenic
CGGACCTCACACAACAATGC+TGG 0.541730 3_4:+77812836 None:intergenic
TAGGATACGCGGGTAATTGG+AGG 0.541746 3_4:+77816784 None:intergenic
AAAGTATTTGGTCGATCTGT+AGG 0.544091 3_4:-77817019 Msa0524330:three_prime_UTR
ACAATGCTGGAGCGGTGTCT+CGG 0.548963 3_4:+77812849 None:intergenic
CAAGATTGATCATAGGAAGA+AGG 0.551150 3_4:-77818235 Msa0524330:CDS
CTGCTCATCTTCGTGTAGCA+TGG 0.552976 3_4:-77817515 Msa0524330:CDS
ATCTAAGAAGAAGTATGATG+AGG 0.555424 3_4:-77812417 Msa0524330:three_prime_UTR
AAGTAATAGCAATAATAGAA+AGG 0.561570 3_4:-77818818 Msa0524330:CDS
AGAATCAGAGTTGGAAACAT+TGG 0.561728 3_4:-77817376 Msa0524330:CDS
AATAGAAAGGTTATTAATGG+AGG 0.564289 3_4:-77818805 Msa0524330:CDS
TCATCTTCGATTCTCTGCGT+CGG 0.568711 3_4:+77812816 None:intergenic
TGTAATGAGGTCATATTACA+TGG 0.570115 3_4:-77817637 Msa0524330:CDS
GCTTGCTCCCAAAAGACAAA+GGG 0.570196 3_4:-77818874 Msa0524330:CDS
GGAATGTGCGCTGCATCTGA+CGG 0.573801 3_4:-77812884 Msa0524330:three_prime_UTR
ATCATTCGGAAAATCAAATG+AGG 0.576166 3_4:+77812641 None:intergenic
AGCTTGCTCCCAAAAGACAA+AGG 0.578029 3_4:-77818875 Msa0524330:CDS
CAGAGAATCGAAGATGAAAA+GGG 0.579603 3_4:-77812810 Msa0524330:three_prime_UTR
CTATGATCAATCTTGGAATG+AGG 0.584964 3_4:+77818243 None:intergenic
TGCGCTGCATCTGACGGAGA+CGG 0.586733 3_4:-77812878 Msa0524330:three_prime_UTR
AAGGAAACTGCTTATCACAT+TGG 0.588505 3_4:-77817147 Msa0524330:three_prime_UTR
TGATGAAGATTGTTGGATTG+TGG 0.588746 3_4:-77812451 Msa0524330:three_prime_UTR
TCTATTTCTTTGTTGTGGAG+AGG 0.590301 3_4:+77817816 None:intergenic
AAATTCGGATGAACAACTGT+TGG 0.590371 3_4:+77812978 None:intergenic
TCCTACAAAGTACACAGAGA+AGG 0.590899 3_4:+77812719 None:intergenic
CTTTGACTTGATAGGTAGCG+TGG 0.591078 3_4:+77817245 None:intergenic
CGCTCCAGCATTGTTGTGTG+AGG 0.593322 3_4:-77812840 Msa0524330:three_prime_UTR
ACAATTAATTAGCTAGGACT+AGG 0.595508 3_4:+77819076 None:intergenic
GATTGATCATAGGAAGAAGG+TGG 0.597603 3_4:-77818232 Msa0524330:CDS
CCTAAAGATCAAGTTAAGGA+TGG 0.613275 3_4:-77817981 Msa0524330:CDS
TGACAAGTATGGTGATATTG+GGG 0.617782 3_4:-77817682 Msa0524330:CDS
ATTTGGAATCAGTTGTAATG+AGG 0.618166 3_4:-77817650 Msa0524330:CDS
ATCAATCTTGGAATGAGGAG+TGG 0.623309 3_4:+77818248 None:intergenic
ATTGGCTCAGAAAGAACAAG+AGG 0.625513 3_4:-77817358 Msa0524330:CDS
CGACGGTGAGGAAGAGACAG+AGG 0.628557 3_4:-77812926 Msa0524330:three_prime_UTR
TAGATGATGTCTAGTAGCAA+CGG 0.628729 3_4:-77818940 Msa0524330:CDS
CTCACACAACAATGCTGGAG+CGG 0.630309 3_4:+77812841 None:intergenic
AGTTAAGGATGGTGCTACTG+AGG 0.634421 3_4:-77817970 Msa0524330:CDS
TCTGATGAAACTGGTGAAGG+TGG 0.634531 3_4:-77817873 Msa0524330:CDS
GTACCAGCAGCAACATGATG+TGG 0.635041 3_4:+77818844 None:intergenic
CACGGAGGACGACGACGGTG+AGG 0.638089 3_4:-77812938 Msa0524330:three_prime_UTR
AAAGTCACAACTCATGACGT+TGG 0.643038 3_4:+77816855 None:intergenic
AGAGGAAGGTGAGAGTGCCG+CGG 0.644711 3_4:-77812908 Msa0524330:three_prime_UTR
GGGACAGTACCATAACATCT+GGG 0.646171 3_4:+77818091 None:intergenic
GGTGAGGAAGAGACAGAGGA+AGG 0.646523 3_4:-77812922 Msa0524330:three_prime_UTR
ATTGATCATAGGAAGAAGGT+GGG 0.646766 3_4:-77818231 Msa0524330:CDS
GGAACACTTTGAAGAACAGG+AGG 0.650409 3_4:+77818195 None:intergenic
TGAATTGAGAAAGATTGAAG+GGG 0.655447 3_4:+77819165 None:intergenic
TTCCGAATGATATGGGAAGG+AGG 0.657733 3_4:-77812629 Msa0524330:three_prime_UTR
CTCACCGTCGTCGTCCTCCG+TGG 0.657770 3_4:+77812939 None:intergenic
ATGCAGCGCACATTCCGCCG+CGG 0.663326 3_4:+77812891 None:intergenic
TGGAGGAGTCAATAAATGGA+CGG 0.667212 3_4:-77819193 None:intergenic
GGATTATGATAGTTATCAAG+CGG 0.670551 3_4:+77819097 None:intergenic
GGAAGGTGAGAGTGCCGCGG+CGG 0.678059 3_4:-77812905 Msa0524330:three_prime_UTR
TGTGCCACGGAGGACGACGA+CGG 0.679917 3_4:-77812943 Msa0524330:three_prime_UTR
AATTCTGATGAAACTGGTGA+AGG 0.697682 3_4:-77817876 Msa0524330:CDS
CGGCGCCGATTGTGCCACGG+AGG 0.718739 3_4:-77812953 Msa0524330:three_prime_UTR
GGTACAAGAAGAAAGAACGA+TGG 0.756411 3_4:+77819118 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTAAATTT+GGG + chr3_4:77818197-77818216 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTAAATT+TGG + chr3_4:77818198-77818217 None:intergenic 0.0%
!!! TTTTTTACAAAAATAAATAG+AGG - chr3_4:77812935-77812954 Msa0524330:three_prime_UTR 10.0%
!!! TTTTTACAAAAATAAATAGA+GGG - chr3_4:77812936-77812955 Msa0524330:three_prime_UTR 10.0%
!! TTAATTTAAATTATAAGTGT+TGG + chr3_4:77813043-77813062 None:intergenic 10.0%
!! AGTGTTTAAATATATATATA+TGG + chr3_4:77813562-77813581 None:intergenic 10.0%
!! ATATAATCTAAAAATAATGT+AGG - chr3_4:77814892-77814911 Msa0524330:intron 10.0%
!! CATATTATTTCAAAATATAA+TGG - chr3_4:77816959-77816978 Msa0524330:three_prime_UTR 10.0%
!!! TTTATGTTTGATTTTATTTT+GGG + chr3_4:77817032-77817051 None:intergenic 10.0%
!!! ATTTATGTTTGATTTTATTT+TGG + chr3_4:77817033-77817052 None:intergenic 10.0%
!!! TCTTTAAAAAAAAAAATTAG+TGG - chr3_4:77819041-77819060 Msa0524330:intron 10.0%
!! AATAATAGAAAGGTTATTAA+TGG - chr3_4:77812777-77812796 Msa0524330:three_prime_UTR 15.0%
!!! TTTGGTTTTATATTAACAAA+AGG + chr3_4:77813529-77813548 None:intergenic 15.0%
!!! ATATATGGTTTATTATCTTT+TGG + chr3_4:77813547-77813566 None:intergenic 15.0%
!! AATACATTACTCAATAAAAT+TGG - chr3_4:77814504-77814523 Msa0524330:intron 15.0%
!!! ACTTATATGCTTTTTATAAT+TGG - chr3_4:77814618-77814637 Msa0524330:intron 15.0%
!!! TTACAATGGTTAAATTTTTA+AGG + chr3_4:77815008-77815027 None:intergenic 15.0%
!!! TTGTATAGTTTAATTTACAA+TGG + chr3_4:77815022-77815041 None:intergenic 15.0%
!! TTTATGGTCATTAATTAATT+TGG + chr3_4:77815452-77815471 None:intergenic 15.0%
!! AATTAATGACCATAAATTAA+AGG - chr3_4:77815456-77815475 Msa0524330:intron 15.0%
!!! CTTTTCATACATATTTTTAT+AGG + chr3_4:77815637-77815656 None:intergenic 15.0%
!! ATTAAAAAAATTATTCGATG+CGG + chr3_4:77815846-77815865 None:intergenic 15.0%
!!! ATAAAATATTTTTCTGCATT+CGG - chr3_4:77816034-77816053 Msa0524330:intron 15.0%
!! TTAAATAAATTAAAGGTCAA+TGG - chr3_4:77816419-77816438 Msa0524330:intron 15.0%
!!! ATAATATTTTCTTTCTTGTT+AGG + chr3_4:77816452-77816471 None:intergenic 15.0%
!!! TTATGTTGTTTTTGATAATT+TGG + chr3_4:77816879-77816898 None:intergenic 15.0%
!!! TTTTGAAATAATATGTAAGT+TGG + chr3_4:77816954-77816973 None:intergenic 15.0%
!!! ATAATGGATAGAAAATTATA+AGG - chr3_4:77816975-77816994 Msa0524330:three_prime_UTR 15.0%
!!! TAATGGATAGAAAATTATAA+GGG - chr3_4:77816976-77816995 Msa0524330:three_prime_UTR 15.0%
!! TGAGTTCATAATTATATAAA+AGG - chr3_4:77817298-77817317 Msa0524330:CDS 15.0%
!! GAGTTCATAATTATATAAAA+GGG - chr3_4:77817299-77817318 Msa0524330:CDS 15.0%
!! AGTTCATAATTATATAAAAG+GGG - chr3_4:77817300-77817319 Msa0524330:CDS 15.0%
!! AAATTAGTGGAAAAAAAATT+TGG - chr3_4:77819054-77819073 Msa0524330:intron 15.0%
!! AAGTAATAGCAATAATAGAA+AGG - chr3_4:77812767-77812786 Msa0524330:three_prime_UTR 20.0%
!!! TTTAAATTATAAGTGTTGGT+TGG + chr3_4:77813039-77813058 None:intergenic 20.0%
!! ATAAAATAAGATCAAATTGC+AGG - chr3_4:77813312-77813331 Msa0524330:three_prime_UTR 20.0%
!!! TTTTTGTTATGAGAATAATG+TGG + chr3_4:77813426-77813445 None:intergenic 20.0%
!!! TTCTTTGTTTCAGTTTTATT+GGG + chr3_4:77813646-77813665 None:intergenic 20.0%
!!! TTTCTTTGTTTCAGTTTTAT+TGG + chr3_4:77813647-77813666 None:intergenic 20.0%
!! AAGATCAATATGTCATTAAT+TGG - chr3_4:77814692-77814711 Msa0524330:intron 20.0%
!! AATCTAAAAATAATGTAGGA+TGG - chr3_4:77814896-77814915 Msa0524330:intron 20.0%
!! ATCTAAAAATAATGTAGGAT+GGG - chr3_4:77814897-77814916 Msa0524330:intron 20.0%
!! CAATTGAAATGTAATGTTAA+AGG + chr3_4:77815341-77815360 None:intergenic 20.0%
!! CTTTAACATTACATTTCAAT+TGG - chr3_4:77815339-77815358 Msa0524330:intron 20.0%
!! TTAAAAAAATTATTCGATGC+GGG + chr3_4:77815845-77815864 None:intergenic 20.0%
!! AAACTACCATTGATATTTAA+TGG + chr3_4:77815970-77815989 None:intergenic 20.0%
!!! TAAAATATTTTTCTGCATTC+GGG - chr3_4:77816035-77816054 Msa0524330:intron 20.0%
!! GAATGATATTTATTCTTCTT+TGG - chr3_4:77816353-77816372 Msa0524330:intron 20.0%
!! AACATTTGCCATTAAAAAAA+TGG - chr3_4:77816480-77816499 Msa0524330:intron 20.0%
!! AACAAAACATATACTAATCA+CGG + chr3_4:77816513-77816532 None:intergenic 20.0%
!!! ATGTTTTGTTCTATTTTACT+CGG - chr3_4:77816523-77816542 Msa0524330:intron 20.0%
!! TTTATTCTACTTACATTAGA+CGG - chr3_4:77816570-77816589 Msa0524330:intron 20.0%
!! GTTAAAAAAATGATTCAATG+CGG + chr3_4:77816651-77816670 None:intergenic 20.0%
!!! GTAATTTTCTATATTTGAGA+CGG - chr3_4:77817330-77817349 Msa0524330:CDS 20.0%
!!! TTTTCTTTTCTTTTGTTCTT+AGG + chr3_4:77817530-77817549 None:intergenic 20.0%
!! GATTTATGAGAAGATTTATT+CGG + chr3_4:77818280-77818299 None:intergenic 20.0%
!!! TTTTGAGATTTTCTATAACA+TGG + chr3_4:77818474-77818493 None:intergenic 20.0%
!! AGAATAAGATTGATTATTGT+AGG + chr3_4:77818505-77818524 None:intergenic 20.0%
! ATGAATTGAGAAAGATTGAA+GGG + chr3_4:77812424-77812443 None:intergenic 25.0%
! AATGAATTGAGAAAGATTGA+AGG + chr3_4:77812425-77812444 None:intergenic 25.0%
! CTTACAACAATTAATTAGCT+AGG + chr3_4:77812518-77812537 None:intergenic 25.0%
! AAATCCAACTAGAAAGAAAT+TGG - chr3_4:77812577-77812596 Msa0524330:three_prime_UTR 25.0%
! AATCCAACTAGAAAGAAATT+GGG - chr3_4:77812578-77812597 Msa0524330:three_prime_UTR 25.0%
! AATAGAAAGGTTATTAATGG+AGG - chr3_4:77812780-77812799 Msa0524330:three_prime_UTR 25.0%
! AATAGAGGGTTTATGAAAAA+TGG - chr3_4:77812950-77812969 Msa0524330:three_prime_UTR 25.0%
! TATTAGATTGAATACGATAG+TGG + chr3_4:77812990-77813009 None:intergenic 25.0%
! AATGAAATGGTCAAACAAAA+TGG + chr3_4:77813163-77813182 None:intergenic 25.0%
! TTAACAAAAGGTTGTGTAAA+GGG + chr3_4:77813517-77813536 None:intergenic 25.0%
! ATTAACAAAAGGTTGTGTAA+AGG + chr3_4:77813518-77813537 None:intergenic 25.0%
!!! TCTTTGTTTCAGTTTTATTG+GGG + chr3_4:77813645-77813664 None:intergenic 25.0%
! TAAAACTGAAACAAAGAAAG+AGG - chr3_4:77813648-77813667 Msa0524330:intron 25.0%
!! TAGTATCTATTTCTTTGTTG+TGG + chr3_4:77813777-77813796 None:intergenic 25.0%
!! TGTATTTTCCAATTGAAACA+CGG + chr3_4:77813843-77813862 None:intergenic 25.0%
!! TACAATGTCAAAGAAAGTTT+TGG - chr3_4:77813859-77813878 Msa0524330:intron 25.0%
!!! TTTGGTCTTACTTATTGAAT+CGG + chr3_4:77814013-77814032 None:intergenic 25.0%
! TGAATTGTTGGATATTGTTA+AGG - chr3_4:77814038-77814057 Msa0524330:intron 25.0%
!!! TTTTTTCCTGTTTTTGTTTG+AGG - chr3_4:77814412-77814431 Msa0524330:intron 25.0%
!!! TTTTTCCTGTTTTTGTTTGA+GGG - chr3_4:77814413-77814432 Msa0524330:intron 25.0%
!!! TCTTTTATGCCAAAAGTATT+TGG - chr3_4:77814554-77814573 Msa0524330:intron 25.0%
! TATAGAAAGACTTTCTATAC+AGG + chr3_4:77814663-77814682 None:intergenic 25.0%
!! AAAAAATTCAGGAATGGATT+TGG + chr3_4:77814775-77814794 None:intergenic 25.0%
! TATTTCAGAATCCAAAAAGT+AGG + chr3_4:77814823-77814842 None:intergenic 25.0%
! TCTAAAAATAATGTAGGATG+GGG - chr3_4:77814898-77814917 Msa0524330:intron 25.0%
! AGTTATTACCAGTTCATTAA+TGG - chr3_4:77814929-77814948 Msa0524330:intron 25.0%
!!! GCTTGATGATTTTCTATTTT+AGG - chr3_4:77815250-77815269 Msa0524330:intron 25.0%
!! TTTGCTGATCCTTTAATTTA+TGG + chr3_4:77815468-77815487 None:intergenic 25.0%
! GTTTCATACATTTCTTTGAT+AGG + chr3_4:77815491-77815510 None:intergenic 25.0%
! TTCATGGTCATCAATTAATT+TGG + chr3_4:77815598-77815617 None:intergenic 25.0%
! TGATGCAATTTAATGAGAAT+AGG - chr3_4:77815660-77815679 Msa0524330:intron 25.0%
! TAAAAAAATTATTCGATGCG+GGG + chr3_4:77815844-77815863 None:intergenic 25.0%
! TGCATTACAATATTTCTCTA+GGG + chr3_4:77815893-77815912 None:intergenic 25.0%
! ATGCATTACAATATTTCTCT+AGG + chr3_4:77815894-77815913 None:intergenic 25.0%
! TGTTAAAGTGAACATATTGT+TGG + chr3_4:77815920-77815939 None:intergenic 25.0%
!! CAATGGTAGTTTTTATAACA+AGG - chr3_4:77815978-77815997 Msa0524330:intron 25.0%
!!! TCTTCACATTATTTGTTGTA+AGG - chr3_4:77816312-77816331 Msa0524330:intron 25.0%
! AATAAAGCAACCAAATCATT+CGG + chr3_4:77816755-77816774 None:intergenic 25.0%
! AATTATCAAACCGAATAACA+TGG - chr3_4:77816805-77816824 Msa0524330:three_prime_UTR 25.0%
!!! AGTTAATTTAGTTTGTGATG+TGG + chr3_4:77816913-77816932 None:intergenic 25.0%
! AGTCATCGTATATTCTTAAT+CGG + chr3_4:77817150-77817169 None:intergenic 25.0%
! TTAAGAATATACGATGACTA+TGG - chr3_4:77817151-77817170 Msa0524330:three_prime_UTR 25.0%
! TCTAAATTATTTCACTCACA+CGG + chr3_4:77817275-77817294 None:intergenic 25.0%
! TTTCTCTGATTTCAAAATGT+AGG + chr3_4:77817408-77817427 None:intergenic 25.0%
!! AATTCCCACAACATTTTAAA+TGG - chr3_4:77817913-77817932 Msa0524330:CDS 25.0%
!! ATTCCCACAACATTTTAAAT+GGG - chr3_4:77817914-77817933 Msa0524330:CDS 25.0%
!! AAACCCATTTAAAATGTTGT+GGG + chr3_4:77817920-77817939 None:intergenic 25.0%
!! AAAACCCATTTAAAATGTTG+TGG + chr3_4:77817921-77817940 None:intergenic 25.0%
! TTAAATGACACCTAATTGTA+GGG + chr3_4:77817958-77817977 None:intergenic 25.0%
! TTTAAATGACACCTAATTGT+AGG + chr3_4:77817959-77817978 None:intergenic 25.0%
! TGATTTATGATGAGAAGAAT+TGG + chr3_4:77818444-77818463 None:intergenic 25.0%
!! GTTTTCGATTTCAGATTTTA+GGG - chr3_4:77818817-77818836 Msa0524330:CDS 25.0%
!! TTTTCGATTTCAGATTTTAG+GGG - chr3_4:77818818-77818837 Msa0524330:CDS 25.0%
!!! ATTTGATTTTCCGAATGATA+TGG - chr3_4:77818948-77818967 Msa0524330:intron 25.0%
!!! TTTGATTTTCCGAATGATAT+GGG - chr3_4:77818949-77818968 Msa0524330:intron 25.0%
!!! TGAAGAATTTTTTTATACGC+TGG - chr3_4:77818988-77819007 Msa0524330:intron 25.0%
TGAATTGAGAAAGATTGAAG+GGG + chr3_4:77812423-77812442 None:intergenic 30.0%
GGATTATGATAGTTATCAAG+CGG + chr3_4:77812491-77812510 None:intergenic 30.0%
ACAATTAATTAGCTAGGACT+AGG + chr3_4:77812512-77812531 None:intergenic 30.0%
! ATACCCAATTTCTTTCTAGT+TGG + chr3_4:77812584-77812603 None:intergenic 30.0%
TGATAAGGATTGGATGATTT+AGG + chr3_4:77812834-77812853 None:intergenic 30.0%
ATCACACTTATGATAAGGAT+TGG + chr3_4:77812844-77812863 None:intergenic 30.0%
GTTTGACCATTTCATTAGAA+TGG - chr3_4:77813167-77813186 Msa0524330:three_prime_UTR 30.0%
ACCATTTCATTAGAATGGAT+TGG - chr3_4:77813172-77813191 Msa0524330:three_prime_UTR 30.0%
ACCAATCCATTCTAATGAAA+TGG + chr3_4:77813176-77813195 None:intergenic 30.0%
!!! TGAGAATAATGTGGTTTTGT+TGG + chr3_4:77813417-77813436 None:intergenic 30.0%
TGTGTAATTGAGCAGAAATT+GGG + chr3_4:77813473-77813492 None:intergenic 30.0%
ATGTGTAATTGAGCAGAAAT+TGG + chr3_4:77813474-77813493 None:intergenic 30.0%
!!! TCCAAAGATTTTAGTTTCTC+TGG - chr3_4:77813736-77813755 Msa0524330:intron 30.0%
! GTATTTTCCAATTGAAACAC+GGG + chr3_4:77813842-77813861 None:intergenic 30.0%
! ACTTGTCAAGTATTGTTTGT+AGG + chr3_4:77813891-77813910 None:intergenic 30.0%
CAAACAATACTTGACAAGTA+TGG - chr3_4:77813892-77813911 Msa0524330:intron 30.0%
TTGACAAGTATGGTGATATT+GGG - chr3_4:77813902-77813921 Msa0524330:intron 30.0%
! ATTTGGAATCAGTTGTAATG+AGG - chr3_4:77813935-77813954 Msa0524330:intron 30.0%
TGTAATGAGGTCATATTACA+TGG - chr3_4:77813948-77813967 Msa0524330:intron 30.0%
!! TGATCTATCTTTGACTTGAT+AGG + chr3_4:77814351-77814370 None:intergenic 30.0%
GAAGAAAAGAAATGCAAGTT+TGG + chr3_4:77814387-77814406 None:intergenic 30.0%
CCTGAAAAAAAATTCAGGAA+TGG + chr3_4:77814781-77814800 None:intergenic 30.0%
!!! CCATTCCTGAATTTTTTTTC+AGG - chr3_4:77814778-77814797 Msa0524330:intron 30.0%
!!! CTTTCTTTTTTAGCATGCTT+TGG + chr3_4:77814957-77814976 None:intergenic 30.0%
AGTTACAACTTTGAACGTAT+TGG - chr3_4:77815142-77815161 Msa0524330:intron 30.0%
CCTAAATCAGTTTAACTAAC+GGG + chr3_4:77815168-77815187 None:intergenic 30.0%
CCCTAAATCAGTTTAACTAA+CGG + chr3_4:77815169-77815188 None:intergenic 30.0%
! CCGTTAGTTAAACTGATTTA+GGG - chr3_4:77815166-77815185 Msa0524330:intron 30.0%
!! ATGAAAATTTGTTGTGTGTG+AGG - chr3_4:77815208-77815227 Msa0524330:intron 30.0%
!! TGAAAATTTGTTGTGTGTGA+GGG - chr3_4:77815209-77815228 Msa0524330:intron 30.0%
AGAAATAAGTTCAAGCAAGT+TGG - chr3_4:77815275-77815294 Msa0524330:intron 30.0%
ATTTCAATTGGTGAAACGTT+TGG - chr3_4:77815351-77815370 Msa0524330:intron 30.0%
! AATTGATGACCATGAATTCA+AGG - chr3_4:77815602-77815621 Msa0524330:intron 30.0%
TTTGTTGATCCTTGAATTCA+TGG + chr3_4:77815614-77815633 None:intergenic 30.0%
CAATTTAATGAGAATAGGCA+CGG - chr3_4:77815665-77815684 Msa0524330:intron 30.0%
ACGAGTAAGTATATGAGAAT+CGG + chr3_4:77815737-77815756 None:intergenic 30.0%
GTTGCTCCATTAAATATCAA+TGG - chr3_4:77815961-77815980 Msa0524330:intron 30.0%
TAAGCGTACAACATTCTATT+AGG + chr3_4:77816259-77816278 None:intergenic 30.0%
!! TTCTTCTTTGGTTCTTTGTA+AGG - chr3_4:77816365-77816384 Msa0524330:intron 30.0%
!! TCTTCTTTGGTTCTTTGTAA+GGG - chr3_4:77816366-77816385 Msa0524330:intron 30.0%
!!! GCGAATCACCATTTTTTTAA+TGG + chr3_4:77816491-77816510 None:intergenic 30.0%
ATTTAATCTTTCAGCTTCGA+CGG - chr3_4:77816607-77816626 Msa0524330:intron 30.0%
ATTTCTTTGACCGAATGATT+TGG - chr3_4:77816742-77816761 Msa0524330:intron 30.0%
TGTTGATATGCCATGTTATT+CGG + chr3_4:77816818-77816837 None:intergenic 30.0%
TGGATAGAAAATTATAAGGG+TGG - chr3_4:77816979-77816998 Msa0524330:three_prime_UTR 30.0%
AAAGAAACATGTGAAGATGA+TGG - chr3_4:77817057-77817076 Msa0524330:three_prime_UTR 30.0%
!! TTTTGAGTATGAGTTTGGTA+CGG - chr3_4:77817353-77817372 Msa0524330:CDS 30.0%
TTGGGTTTGAATATGAGTTT+GGG + chr3_4:77817431-77817450 None:intergenic 30.0%
ATTGGGTTTGAATATGAGTT+TGG + chr3_4:77817432-77817451 None:intergenic 30.0%
TATTCAAACCCAATCAAATG+CGG - chr3_4:77817438-77817457 Msa0524330:CDS 30.0%
AAAACTCGTTAAATCGGATT+CGG - chr3_4:77817464-77817483 Msa0524330:CDS 30.0%
AAAACTGACATTTCATGTGT+TGG + chr3_4:77818113-77818132 None:intergenic 30.0%
AAGATTTATTCGGTTTCGAA+TGG + chr3_4:77818270-77818289 None:intergenic 30.0%
ACTTGATATTCTTGATGCTT+GGG + chr3_4:77818374-77818393 None:intergenic 30.0%
!!! GAAGTTTTTTGTTGAGGAAA+TGG + chr3_4:77818405-77818424 None:intergenic 30.0%
!!! ATACTGGAAGTTTTTTGTTG+AGG + chr3_4:77818411-77818430 None:intergenic 30.0%
!! AATTGGATTGGTTTGAATAC+TGG + chr3_4:77818427-77818446 None:intergenic 30.0%
TATGATGAGAAGAATTGGAT+TGG + chr3_4:77818439-77818458 None:intergenic 30.0%
ATTGATTATTGTAGGCTTCA+TGG + chr3_4:77818497-77818516 None:intergenic 30.0%
! ATCTGAAATCGAAAACGAAT+TGG + chr3_4:77818813-77818832 None:intergenic 30.0%
! CGTTTTCGATTTCAGATTTT+AGG - chr3_4:77818816-77818835 Msa0524330:CDS 30.0%
ATCATTCGGAAAATCAAATG+AGG + chr3_4:77818947-77818966 None:intergenic 30.0%
!! ATGTTGATGATGAAGATTGT+TGG - chr3_4:77819127-77819146 Msa0524330:five_prime_UTR 30.0%
! ATCTAAGAAGAAGTATGATG+AGG - chr3_4:77819168-77819187 Msa0524330:five_prime_UTR 30.0%
! TCTAAGAAGAAGTATGATGA+GGG - chr3_4:77819169-77819188 Msa0524330:five_prime_UTR 30.0%
TAGATGATGTCTAGTAGCAA+CGG - chr3_4:77812645-77812664 Msa0524330:three_prime_UTR 35.0%
!! TTTGGTTCCCTTTGTCTTTT+GGG + chr3_4:77812721-77812740 None:intergenic 35.0%
TTGGCATCACACTTATGATA+AGG + chr3_4:77812849-77812868 None:intergenic 35.0%
CGTTTACATGTGTAGTAAGT+AGG - chr3_4:77813124-77813143 Msa0524330:three_prime_UTR 35.0%
TGCAGGAGATAAAAATGTGT+TGG + chr3_4:77813212-77813231 None:intergenic 35.0%
CTATGATCAATCTTGGAATG+AGG + chr3_4:77813345-77813364 None:intergenic 35.0%
CTCATTCCAAGATTGATCAT+AGG - chr3_4:77813343-77813362 Msa0524330:three_prime_UTR 35.0%
CTTCTTCCTATGATCAATCT+TGG + chr3_4:77813352-77813371 None:intergenic 35.0%
CAAGATTGATCATAGGAAGA+AGG - chr3_4:77813350-77813369 Msa0524330:intron 35.0%
ATTGATCATAGGAAGAAGGT+GGG - chr3_4:77813354-77813373 Msa0524330:intron 35.0%
!!! GAATAATGTGGTTTTGTTGG+TGG + chr3_4:77813414-77813433 None:intergenic 35.0%
ATTACACATCCCAGATGTTA+TGG - chr3_4:77813485-77813504 Msa0524330:intron 35.0%
! CCATCCTTAACTTGATCTTT+AGG + chr3_4:77813607-77813626 None:intergenic 35.0%
CCTAAAGATCAAGTTAAGGA+TGG - chr3_4:77813604-77813623 Msa0524330:intron 35.0%
!!! TTGTTTCAGTTTTATTGGGG+AGG + chr3_4:77813642-77813661 None:intergenic 35.0%
GTTTCATCAGAATTGGTTAC+TGG + chr3_4:77813703-77813722 None:intergenic 35.0%
GTAACCAATTCTGATGAAAC+TGG - chr3_4:77813703-77813722 Msa0524330:intron 35.0%
TTCACCAGTTTCATCAGAAT+TGG + chr3_4:77813710-77813729 None:intergenic 35.0%
AATTCTGATGAAACTGGTGA+AGG - chr3_4:77813709-77813728 Msa0524330:intron 35.0%
GCCAGAGAAACTAAAATCTT+TGG + chr3_4:77813740-77813759 None:intergenic 35.0%
! TCTATTTCTTTGTTGTGGAG+AGG + chr3_4:77813772-77813791 None:intergenic 35.0%
GAAATAGATACTAGTAGCGA+AGG - chr3_4:77813784-77813803 Msa0524330:intron 35.0%
! GTCAAGTATTGTTTGTAGGA+TGG + chr3_4:77813887-77813906 None:intergenic 35.0%
CTTGACAAGTATGGTGATAT+TGG - chr3_4:77813901-77813920 Msa0524330:intron 35.0%
TGACAAGTATGGTGATATTG+GGG - chr3_4:77813903-77813922 Msa0524330:intron 35.0%
CGGAAGAAGATTGTAATTCT+TGG + chr3_4:77813993-77814012 None:intergenic 35.0%
ATCCAACAATTCACTCACTT+TGG + chr3_4:77814031-77814050 None:intergenic 35.0%
! TGAATTGATTAGTCACCATC+AGG - chr3_4:77814128-77814147 Msa0524330:intron 35.0%
TTTCCATTTCCATATCCTGA+TGG + chr3_4:77814146-77814165 None:intergenic 35.0%
TCAGGATATGGAAATGGAAA+AGG - chr3_4:77814146-77814165 Msa0524330:intron 35.0%
GGCTAACTATGATCTTGAAA+TGG - chr3_4:77814167-77814186 Msa0524330:intron 35.0%
AGAATCAGAGTTGGAAACAT+TGG - chr3_4:77814209-77814228 Msa0524330:intron 35.0%
GATCTCTGATTTCAGGAATT+CGG + chr3_4:77814269-77814288 None:intergenic 35.0%
CTTAACCCTCAAACAAAAAC+AGG + chr3_4:77814421-77814440 None:intergenic 35.0%
!!! CTGTTTTTGTTTGAGGGTTA+AGG - chr3_4:77814419-77814438 Msa0524330:intron 35.0%
AAGGAAACTGCTTATCACAT+TGG - chr3_4:77814438-77814457 Msa0524330:intron 35.0%
AAATTGGATGCAAGCAACAT+AGG - chr3_4:77814520-77814539 Msa0524330:intron 35.0%
! ACAGATCGACCAAATACTTT+TGG + chr3_4:77814566-77814585 None:intergenic 35.0%
! AAAGTATTTGGTCGATCTGT+AGG - chr3_4:77814566-77814585 Msa0524330:intron 35.0%
AATCCAAAAAGTAGGATACG+CGG + chr3_4:77814815-77814834 None:intergenic 35.0%
!! CTTTGGAACCATTAATGAAC+TGG + chr3_4:77814940-77814959 None:intergenic 35.0%
! ACAGTAAAAACATTTGCTGC+TGG - chr3_4:77815100-77815119 Msa0524330:intron 35.0%
! CCCGTTAGTTAAACTGATTT+AGG - chr3_4:77815165-77815184 Msa0524330:intron 35.0%
!! GAAAATTTGTTGTGTGTGAG+GGG - chr3_4:77815210-77815229 Msa0524330:intron 35.0%
!! AAAATTTGTTGTGTGTGAGG+GGG - chr3_4:77815211-77815230 Msa0524330:intron 35.0%
TATCATTTGCCACGTATACA+TGG + chr3_4:77815302-77815321 None:intergenic 35.0%
TACGTGGCAAATGATATAGA+TGG - chr3_4:77815306-77815325 Msa0524330:intron 35.0%
ACGTGGCAAATGATATAGAT+GGG - chr3_4:77815307-77815326 Msa0524330:intron 35.0%
AACAGACTTGATGCAATTGA+CGG - chr3_4:77815508-77815527 Msa0524330:intron 35.0%
AGTATATGAGAATCGGGTAT+GGG + chr3_4:77815730-77815749 None:intergenic 35.0%
AAGTATATGAGAATCGGGTA+TGG + chr3_4:77815731-77815750 None:intergenic 35.0%
CGAGTAAGTATATGAGAATC+GGG + chr3_4:77815736-77815755 None:intergenic 35.0%
AATGGAGCAACTAAATGAGT+CGG + chr3_4:77815952-77815971 None:intergenic 35.0%
! ATATTTTTCTGCATTCGGGA+CGG - chr3_4:77816039-77816058 Msa0524330:intron 35.0%
! TTTTCCCCGATTTCAAAACA+CGG + chr3_4:77816118-77816137 None:intergenic 35.0%
GCATTACAACATTGCACTTT+AGG + chr3_4:77816695-77816714 None:intergenic 35.0%
! TTTGTGATGTGGTTTGTACT+TGG + chr3_4:77816902-77816921 None:intergenic 35.0%
!!! GTGGTGAACGTTTTTAACTT+AGG - chr3_4:77816998-77817017 Msa0524330:three_prime_UTR 35.0%
GACAAAGAGAGTGGAAATAA+TGG - chr3_4:77817081-77817100 Msa0524330:three_prime_UTR 35.0%
ATATACGATGACTATGGTGA+TGG - chr3_4:77817157-77817176 Msa0524330:three_prime_UTR 35.0%
ATGGAGAAGAGAGATACTAA+GGG - chr3_4:77817176-77817195 Msa0524330:three_prime_UTR 35.0%
TTTGAGTATGAGTTTGGTAC+GGG - chr3_4:77817354-77817373 Msa0524330:CDS 35.0%
TCAAAATGTAGGTATGAGAC+AGG + chr3_4:77817397-77817416 None:intergenic 35.0%
ATTCAAACCCAATCAAATGC+GGG - chr3_4:77817439-77817458 Msa0524330:CDS 35.0%
TCAAGTTATAACACAGTCGT+AGG - chr3_4:77817569-77817588 Msa0524330:CDS 35.0%
CAAGTTATAACACAGTCGTA+GGG - chr3_4:77817570-77817589 Msa0524330:CDS 35.0%
AAGTTATAACACAGTCGTAG+GGG - chr3_4:77817571-77817590 Msa0524330:CDS 35.0%
CTTTAAGTGTAGTAGTGAAG+TGG + chr3_4:77817605-77817624 None:intergenic 35.0%
!! CTTTGCAAAGTTAATTTGCC+AGG + chr3_4:77818005-77818024 None:intergenic 35.0%
!! ACGTCATTAATTTGATGACG+TGG - chr3_4:77818070-77818089 Msa0524330:intron 35.0%
ATGAGAAGAAGATGAAGACA+GGG + chr3_4:77818138-77818157 None:intergenic 35.0%
AATGAGAAGAAGATGAAGAC+AGG + chr3_4:77818139-77818158 None:intergenic 35.0%
TTCTCTCTTCTTCTTCTTAC+TGG - chr3_4:77818157-77818176 Msa0524330:CDS 35.0%
GGAAGATTAGAGATGAAGTT+GGG + chr3_4:77818328-77818347 None:intergenic 35.0%
TCATCTCTAATCTTCCCTTT+AGG - chr3_4:77818332-77818351 Msa0524330:intron 35.0%
CACTTGATATTCTTGATGCT+TGG + chr3_4:77818375-77818394 None:intergenic 35.0%
GGTGATTCTTACTATACACT+TGG + chr3_4:77818589-77818608 None:intergenic 35.0%
AAATTCGGATGAACAACTGT+TGG + chr3_4:77818610-77818629 None:intergenic 35.0%
! AGTTGTTCATCCGAATTTTC+CGG - chr3_4:77818612-77818631 Msa0524330:intron 35.0%
CAGAGAATCGAAGATGAAAA+GGG - chr3_4:77818775-77818794 Msa0524330:CDS 35.0%
!! GATTTCAGATTTTAGGGGTT+GGG - chr3_4:77818823-77818842 Msa0524330:CDS 35.0%
! ATTTTCCGAATGATATGGGA+AGG - chr3_4:77818953-77818972 Msa0524330:intron 35.0%
ATGTTCAATTGCAGCTATGA+AGG - chr3_4:77819100-77819119 Msa0524330:five_prime_UTR 35.0%
TGATGAAGATTGTTGGATTG+TGG - chr3_4:77819134-77819153 Msa0524330:five_prime_UTR 35.0%
GAAGAAAGAACGATGGAAAG+TGG + chr3_4:77812463-77812482 None:intergenic 40.0%
GGTACAAGAAGAAAGAACGA+TGG + chr3_4:77812470-77812489 None:intergenic 40.0%
!! GTTTGGTTCCCTTTGTCTTT+TGG + chr3_4:77812722-77812741 None:intergenic 40.0%
GATGCCAATTGCAACAATTC+AGG - chr3_4:77812861-77812880 Msa0524330:three_prime_UTR 40.0%
GGAACCTGAATTGTTGCAAT+TGG + chr3_4:77812868-77812887 None:intergenic 40.0%
TGTAATGACACAATGAGTGC+AGG + chr3_4:77813229-77813248 None:intergenic 40.0%
ATCAATCTTGGAATGAGGAG+TGG + chr3_4:77813340-77813359 None:intergenic 40.0%
GATTGATCATAGGAAGAAGG+TGG - chr3_4:77813353-77813372 Msa0524330:intron 40.0%
GATGAGATCATTCCTTCTTC+TGG - chr3_4:77813447-77813466 Msa0524330:intron 40.0%
GCAGCCTAAAGATCAAGTTA+AGG - chr3_4:77813600-77813619 Msa0524330:intron 40.0%
! TTCTTTGTTGTGGAGAGGAA+GGG + chr3_4:77813767-77813786 None:intergenic 40.0%
! TTTCTTTGTTGTGGAGAGGA+AGG + chr3_4:77813768-77813787 None:intergenic 40.0%
TCTGAATCCCGTGTTTCAAT+TGG - chr3_4:77813832-77813851 Msa0524330:intron 40.0%
GACCAAAGTGAGTGAATTGT+TGG - chr3_4:77814026-77814045 Msa0524330:intron 40.0%
! GATTAGTCACCATCAGGATA+TGG - chr3_4:77814134-77814153 Msa0524330:intron 40.0%
TCACCATCAGGATATGGAAA+TGG - chr3_4:77814140-77814159 Msa0524330:intron 40.0%
AGAACAGCTAGAATCAGAGT+TGG - chr3_4:77814200-77814219 Msa0524330:intron 40.0%
! ATTGGCTCAGAAAGAACAAG+AGG - chr3_4:77814227-77814246 Msa0524330:intron 40.0%
CTCAAACGATCTCTGATTTC+AGG + chr3_4:77814276-77814295 None:intergenic 40.0%
AAAGTCACAACTCATGACGT+TGG + chr3_4:77814733-77814752 None:intergenic 40.0%
! TCAGGAATGGATTTGGCTAT+TGG + chr3_4:77814768-77814787 None:intergenic 40.0%
GGAGGCCTGAAAAAAAATTC+AGG + chr3_4:77814786-77814805 None:intergenic 40.0%
ATCCAAAAAGTAGGATACGC+GGG + chr3_4:77814814-77814833 None:intergenic 40.0%
! CTGATTTAGGGTGAATACGA+TGG - chr3_4:77815178-77815197 Msa0524330:intron 40.0%
GTATATGAGAATCGGGTATG+GGG + chr3_4:77815729-77815748 None:intergenic 40.0%
TTCAATTTCTCATCCCCGTT+GGG + chr3_4:77815773-77815792 None:intergenic 40.0%
AAATTATTCGATGCGGGGAT+GGG + chr3_4:77815839-77815858 None:intergenic 40.0%
AAAATTATTCGATGCGGGGA+TGG + chr3_4:77815840-77815859 None:intergenic 40.0%
! TATTTTTCTGCATTCGGGAC+GGG - chr3_4:77816040-77816059 Msa0524330:intron 40.0%
CGATTTCAAAACACGGGTAT+GGG + chr3_4:77816111-77816130 None:intergenic 40.0%
!!! CCATACCCGTGTTTTGAAAT+CGG - chr3_4:77816109-77816128 Msa0524330:intron 40.0%
!!! CATACCCGTGTTTTGAAATC+GGG - chr3_4:77816110-77816129 Msa0524330:intron 40.0%
!!! ATACCCGTGTTTTGAAATCG+GGG - chr3_4:77816111-77816130 Msa0524330:intron 40.0%
TTTCCCCGATTTCAAAACAC+GGG + chr3_4:77816117-77816136 None:intergenic 40.0%
ATACCCAAACCCAGTCAAAA+CGG - chr3_4:77816147-77816166 Msa0524330:intron 40.0%
AAAACCCGTCAAATTGGGTT+TGG - chr3_4:77816172-77816191 Msa0524330:intron 40.0%
CAAACCAAACCCAATTTGAC+GGG + chr3_4:77816179-77816198 None:intergenic 40.0%
CCAAACCAAACCCAATTTGA+CGG + chr3_4:77816180-77816199 None:intergenic 40.0%
! CGTCAAATTGGGTTTGGTTT+GGG - chr3_4:77816178-77816197 Msa0524330:intron 40.0%
!! TTGGTTTGGGTGTGTAACTA+CGG - chr3_4:77816191-77816210 Msa0524330:intron 40.0%
CATGTGTTCTCATTTAGGCA+TGG + chr3_4:77816232-77816251 None:intergenic 40.0%
CATGCCTAAATGAGAACACA+TGG - chr3_4:77816230-77816249 Msa0524330:intron 40.0%
GTCTCCATGTGTTCTCATTT+AGG + chr3_4:77816237-77816256 None:intergenic 40.0%
TGTAAGGCGTGATAGCATTA+AGG - chr3_4:77816328-77816347 Msa0524330:intron 40.0%
TTTACAACGTGATTCGCTCT+TGG + chr3_4:77817112-77817131 None:intergenic 40.0%
GATGGAGAAGAGAGATACTA+AGG - chr3_4:77817175-77817194 Msa0524330:three_prime_UTR 40.0%
AGAAGAGAGATACTAAGGGT+GGG - chr3_4:77817180-77817199 Msa0524330:three_prime_UTR 40.0%
ACAGAGAGAACTCATAGAAG+TGG - chr3_4:77817218-77817237 Msa0524330:exon 40.0%
CAGAGAGAACTCATAGAAGT+GGG - chr3_4:77817219-77817238 Msa0524330:exon 40.0%
!!! GACGGTTTTGAGTATGAGTT+TGG - chr3_4:77817348-77817367 Msa0524330:CDS 40.0%
TTCAAACCCAATCAAATGCG+GGG - chr3_4:77817440-77817459 Msa0524330:CDS 40.0%
! TCGTTAAATCGGATTCGGTT+TGG - chr3_4:77817469-77817488 Msa0524330:CDS 40.0%
ATAGCAAAACTATGTACCCG+TGG + chr3_4:77817503-77817522 None:intergenic 40.0%
TAGCGCTGCATTTATTTACG+TGG + chr3_4:77817866-77817885 None:intergenic 40.0%
TGTGTTTCGTCCCTACAATT+AGG - chr3_4:77817945-77817964 Msa0524330:CDS 40.0%
GTCACTGTAATCGTTAATCC+TGG - chr3_4:77817984-77818003 Msa0524330:CDS 40.0%
ACAGTCATTAAGTGGGTCAA+GGG + chr3_4:77818049-77818068 None:intergenic 40.0%
TGACGTGACAGTCATTAAGT+GGG + chr3_4:77818056-77818075 None:intergenic 40.0%
ATGACGTGACAGTCATTAAG+TGG + chr3_4:77818057-77818076 None:intergenic 40.0%
TGAGAAGAAGATGAAGACAG+GGG + chr3_4:77818137-77818156 None:intergenic 40.0%
ATGGAAGAAGAAGGTCTTGA+TGG + chr3_4:77818251-77818270 None:intergenic 40.0%
GGGAAGATTAGAGATGAAGT+TGG + chr3_4:77818329-77818348 None:intergenic 40.0%
ATATTCTTGATGCTTGGGCA+GGG + chr3_4:77818369-77818388 None:intergenic 40.0%
! TTTTGTTGAGGAAATGGCAG+TGG + chr3_4:77818399-77818418 None:intergenic 40.0%
! TTCATCCCAATCGGAGATTT+TGG - chr3_4:77818561-77818580 Msa0524330:intron 40.0%
! TCATCCCAATCGGAGATTTT+GGG - chr3_4:77818562-77818581 Msa0524330:intron 40.0%
GCAGAGAATCGAAGATGAAA+AGG - chr3_4:77818774-77818793 Msa0524330:CDS 40.0%
!! CGATTTCAGATTTTAGGGGT+TGG - chr3_4:77818822-77818841 Msa0524330:CDS 40.0%
TCCTACAAAGTACACAGAGA+AGG + chr3_4:77818869-77818888 None:intergenic 40.0%
TACCTCCTTCCCATATCATT+CGG + chr3_4:77818961-77818980 None:intergenic 40.0%
! GCTTGAGTGCATTGATGGTA+AGG + chr3_4:77812693-77812712 None:intergenic 45.0%
AGCAAGCTTGAGTGCATTGA+TGG + chr3_4:77812698-77812717 None:intergenic 45.0%
! AGCTTGCTCCCAAAAGACAA+AGG - chr3_4:77812710-77812729 Msa0524330:three_prime_UTR 45.0%
GCTTGCTCCCAAAAGACAAA+GGG - chr3_4:77812711-77812730 Msa0524330:three_prime_UTR 45.0%
AGCAGCAACATGATGTGGTT+TGG + chr3_4:77812739-77812758 None:intergenic 45.0%
AAACCACATCATGTTGCTGC+TGG - chr3_4:77812738-77812757 Msa0524330:three_prime_UTR 45.0%
CATGTGTAGTAAGTAGGTGC+AGG - chr3_4:77813130-77813149 Msa0524330:three_prime_UTR 45.0%
! CTTTGAAGAACAGGAGGTTG+TGG + chr3_4:77813387-77813406 None:intergenic 45.0%
! GGAACACTTTGAAGAACAGG+AGG + chr3_4:77813393-77813412 None:intergenic 45.0%
! GGTGGAACACTTTGAAGAAC+AGG + chr3_4:77813396-77813415 None:intergenic 45.0%
GGGACAGTACCATAACATCT+GGG + chr3_4:77813497-77813516 None:intergenic 45.0%
AGGGACAGTACCATAACATC+TGG + chr3_4:77813498-77813517 None:intergenic 45.0%
!! AGTTAAGGATGGTGCTACTG+AGG - chr3_4:77813615-77813634 Msa0524330:intron 45.0%
TCTGATGAAACTGGTGAAGG+TGG - chr3_4:77813712-77813731 Msa0524330:intron 45.0%
! TCTTTGTTGTGGAGAGGAAG+GGG + chr3_4:77813766-77813785 None:intergenic 45.0%
TATTGGGGCAAGCTGTGATT+TGG - chr3_4:77813918-77813937 Msa0524330:intron 45.0%
CATGGAGTGTGTATGCTTTG+TGG - chr3_4:77813966-77813985 Msa0524330:intron 45.0%
!! CTTTGACTTGATAGGTAGCG+TGG + chr3_4:77814343-77814362 None:intergenic 45.0%
!! ACAACTCATGACGTTGGTTC+TGG + chr3_4:77814727-77814746 None:intergenic 45.0%
AAGTAGGATACGCGGGTAAT+TGG + chr3_4:77814807-77814826 None:intergenic 45.0%
!! TACCCGCGTATCCTACTTTT+TGG - chr3_4:77814809-77814828 Msa0524330:intron 45.0%
TAGGGTGAATACGATGGAGA+AGG - chr3_4:77815184-77815203 Msa0524330:intron 45.0%
AGGGTGAATACGATGGAGAA+GGG - chr3_4:77815185-77815204 Msa0524330:intron 45.0%
!! CAAGTTGGTCCATGTATACG+TGG - chr3_4:77815290-77815309 Msa0524330:intron 45.0%
! GGTGAAACGTTTGGAGTTGA+CGG - chr3_4:77815360-77815379 Msa0524330:intron 45.0%
! AAACGTTTGGAGTTGACGGA+AGG - chr3_4:77815364-77815383 Msa0524330:intron 45.0%
GACTTGATGCAATTGACGGA+AGG - chr3_4:77815512-77815531 Msa0524330:intron 45.0%
AATGAGAATAGGCACGGCAA+TGG - chr3_4:77815671-77815690 Msa0524330:intron 45.0%
ATGAGAATAGGCACGGCAAT+GGG - chr3_4:77815672-77815691 Msa0524330:intron 45.0%
GTTCAATTTCTCATCCCCGT+TGG + chr3_4:77815774-77815793 None:intergenic 45.0%
GGGATGGGTAACGAGTATAT+AGG + chr3_4:77816091-77816110 None:intergenic 45.0%
TCAAAACACGGGTATGGGAT+GGG + chr3_4:77816106-77816125 None:intergenic 45.0%
TTCAAAACACGGGTATGGGA+TGG + chr3_4:77816107-77816126 None:intergenic 45.0%
CCGATTTCAAAACACGGGTA+TGG + chr3_4:77816112-77816131 None:intergenic 45.0%
CTGGGTTTGGGTATGAGTTT+GGG + chr3_4:77816141-77816160 None:intergenic 45.0%
ACTGGGTTTGGGTATGAGTT+TGG + chr3_4:77816142-77816161 None:intergenic 45.0%
TACCCAAACCCAGTCAAAAC+GGG - chr3_4:77816148-77816167 Msa0524330:intron 45.0%
! CCGTCAAATTGGGTTTGGTT+TGG - chr3_4:77816177-77816196 Msa0524330:intron 45.0%
! TGGTTTGGGTGTGTAACTAC+GGG - chr3_4:77816192-77816211 Msa0524330:intron 45.0%
! TCTTTCAGCTTCGACGGTTT+TGG - chr3_4:77816613-77816632 Msa0524330:intron 45.0%
! CTTTCAGCTTCGACGGTTTT+GGG - chr3_4:77816614-77816633 Msa0524330:intron 45.0%
! GATGATGGTGACAAAGAGAG+TGG - chr3_4:77817072-77817091 Msa0524330:three_prime_UTR 45.0%
GAGAAGAGAGATACTAAGGG+TGG - chr3_4:77817179-77817198 Msa0524330:three_prime_UTR 45.0%
TCAAACCCAATCAAATGCGG+GGG - chr3_4:77817441-77817460 Msa0524330:CDS 45.0%
! GTTTTCCCCCGCATTTGATT+GGG + chr3_4:77817449-77817468 None:intergenic 45.0%
! AGTTTTCCCCCGCATTTGAT+TGG + chr3_4:77817450-77817469 None:intergenic 45.0%
CGGGGGAAAACTCGTTAAAT+CGG - chr3_4:77817458-77817477 Msa0524330:CDS 45.0%
!! TCGGTTTGGACGAATATCCA+CGG - chr3_4:77817483-77817502 Msa0524330:CDS 45.0%
GAGTTCAGCCAAGTTTGACT+CGG + chr3_4:77817644-77817663 None:intergenic 45.0%
GACAGTCATTAAGTGGGTCA+AGG + chr3_4:77818050-77818069 None:intergenic 45.0%
! GAAGGTCTTGATGGATGTTC+AGG + chr3_4:77818242-77818261 None:intergenic 45.0%
CGGTTTCGAATGGAAGAAGA+AGG + chr3_4:77818260-77818279 None:intergenic 45.0%
ATCTTCCCTTTAGGTCCCAT+TGG - chr3_4:77818341-77818360 Msa0524330:intron 45.0%
GATATTCTTGATGCTTGGGC+AGG + chr3_4:77818370-77818389 None:intergenic 45.0%
CAGCAGTTGTTCATCCCAAT+CGG - chr3_4:77818552-77818571 Msa0524330:intron 45.0%
TGGTCCCAAAATCTCCGATT+GGG + chr3_4:77818569-77818588 None:intergenic 45.0%
TTGGTCCCAAAATCTCCGAT+TGG + chr3_4:77818570-77818589 None:intergenic 45.0%
TCATCTTCGATTCTCTGCGT+CGG + chr3_4:77818772-77818791 None:intergenic 45.0%
!! AGATTTTAGGGGTTGGGTGT+GGG - chr3_4:77818829-77818848 Msa0524330:CDS 45.0%
GCCTTCTCTGTGTACTTTGT+AGG - chr3_4:77818865-77818884 Msa0524330:CDS 45.0%
TTCCGAATGATATGGGAAGG+AGG - chr3_4:77818956-77818975 Msa0524330:intron 45.0%
!! TAAGAAATTAAATAAATTAA+AGG - chr3_4:77816412-77816431 Msa0524330:intron 5.0%
GTACCAGCAGCAACATGATG+TGG + chr3_4:77812744-77812763 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr3_4:77812890-77812909 None:intergenic 50.0%
AGTAAGTAGGTGCAGGTGCA+TGG - chr3_4:77813137-77813156 Msa0524330:three_prime_UTR 50.0%
GCAGAAATTGGGCCAGAAGA+AGG + chr3_4:77813462-77813481 None:intergenic 50.0%
CTGCTCATCTTCGTGTAGCA+TGG - chr3_4:77814070-77814089 Msa0524330:intron 50.0%
CTTGAGCAGCTCATGTCTTC+AGG - chr3_4:77814300-77814319 Msa0524330:intron 50.0%
TAGGATACGCGGGTAATTGG+AGG + chr3_4:77814804-77814823 None:intergenic 50.0%
TGAGAATAGGCACGGCAATG+GGG - chr3_4:77815673-77815692 Msa0524330:intron 50.0%
TGAGAATCGGGTATGGGGAT+GGG + chr3_4:77815724-77815743 None:intergenic 50.0%
ATGAGAATCGGGTATGGGGA+TGG + chr3_4:77815725-77815744 None:intergenic 50.0%
TTCTCATCCCCGTTGGGTAT+GGG + chr3_4:77815767-77815786 None:intergenic 50.0%
TTTCTCATCCCCGTTGGGTA+TGG + chr3_4:77815768-77815787 None:intergenic 50.0%
! GACGGGTTTGGGTATGAGTT+CGG - chr3_4:77816057-77816076 Msa0524330:intron 50.0%
ACGGGTTTGGGTATGAGTTC+GGG - chr3_4:77816058-77816077 Msa0524330:intron 50.0%
TTTGGGTATGAGTTCGGGGT+GGG - chr3_4:77816063-77816082 Msa0524330:intron 50.0%
ACCCAAACCCAGTCAAAACG+GGG - chr3_4:77816149-77816168 Msa0524330:intron 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG + chr3_4:77816153-77816172 None:intergenic 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG + chr3_4:77816154-77816173 None:intergenic 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG + chr3_4:77816159-77816178 None:intergenic 50.0%
ACGGGGAAAACCCGTCAAAT+TGG - chr3_4:77816166-77816185 Msa0524330:intron 50.0%
CGGGGAAAACCCGTCAAATT+GGG - chr3_4:77816167-77816186 Msa0524330:intron 50.0%
TGGGTGTGTAACTACGGGTA+TGG - chr3_4:77816197-77816216 Msa0524330:intron 50.0%
GGGTGTGTAACTACGGGTAT+GGG - chr3_4:77816198-77816217 Msa0524330:intron 50.0%
GATACTAAGGGTGGGAGATG+TGG - chr3_4:77817188-77817207 Msa0524330:three_prime_UTR 50.0%
! CGGTTTGGACGAATATCCAC+GGG - chr3_4:77817484-77817503 Msa0524330:CDS 50.0%
GAGTCGAACCGAGTCAAACT+TGG - chr3_4:77817633-77817652 Msa0524330:CDS 50.0%
CGATTGGGATGAACAACTGC+TGG + chr3_4:77818554-77818573 None:intergenic 50.0%
! ACAATCGGCGCCGGAAAATT+CGG + chr3_4:77818625-77818644 None:intergenic 50.0%
CTCACACAACAATGCTGGAG+CGG + chr3_4:77818747-77818766 None:intergenic 50.0%
!! CAGATTTTAGGGGTTGGGTG+TGG - chr3_4:77818828-77818847 Msa0524330:CDS 50.0%
GAGAGAGAGAGAGAGAGAGG+AGG + chr3_4:77812889-77812908 None:intergenic 55.0%
GAGAATCGGGTATGGGGATG+GGG + chr3_4:77815723-77815742 None:intergenic 55.0%
GTTACCCCACCCATACCCAA+CGG - chr3_4:77815755-77815774 Msa0524330:intron 55.0%
TTACCCCACCCATACCCAAC+GGG - chr3_4:77815756-77815775 Msa0524330:intron 55.0%
TTCGATGCGGGGATGGGTAT+GGG + chr3_4:77815833-77815852 None:intergenic 55.0%
ATTCGATGCGGGGATGGGTA+TGG + chr3_4:77815834-77815853 None:intergenic 55.0%
! TTCTGCATTCGGGACGGGTT+TGG - chr3_4:77816045-77816064 Msa0524330:intron 55.0%
! TCTGCATTCGGGACGGGTTT+GGG - chr3_4:77816046-77816065 Msa0524330:intron 55.0%
CGGGTTTGGGTATGAGTTCG+GGG - chr3_4:77816059-77816078 Msa0524330:intron 55.0%
GTTTGGGTATGAGTTCGGGG+TGG - chr3_4:77816062-77816081 Msa0524330:intron 55.0%
!! CGGGTTTTCCCCGTTTTGAC+TGG + chr3_4:77816160-77816179 None:intergenic 55.0%
CTAAGGGTGGGAGATGTGGA+AGG - chr3_4:77817192-77817211 Msa0524330:three_prime_UTR 55.0%
GGGCACCAATGGGACCTAAA+GGG + chr3_4:77818349-77818368 None:intergenic 55.0%
! AGGGCACCAATGGGACCTAA+AGG + chr3_4:77818350-77818369 None:intergenic 55.0%
GGTGAGGAAGAGACAGAGGA+AGG - chr3_4:77818663-77818682 Msa0524330:intron 55.0%
GGAATGTGCGCTGCATCTGA+CGG - chr3_4:77818701-77818720 Msa0524330:intron 55.0%
ACAATGCTGGAGCGGTGTCT+CGG + chr3_4:77818739-77818758 None:intergenic 55.0%
CGCTCCAGCATTGTTGTGTG+AGG - chr3_4:77818745-77818764 Msa0524330:CDS 55.0%
CGGACCTCACACAACAATGC+TGG + chr3_4:77818752-77818771 None:intergenic 55.0%
GAATAGGCACGGCAATGGGG+CGG - chr3_4:77815676-77815695 Msa0524330:intron 60.0%
AATAGGCACGGCAATGGGGC+GGG - chr3_4:77815677-77815696 Msa0524330:intron 60.0%
TACCCCACCCATACCCAACG+GGG - chr3_4:77815757-77815776 Msa0524330:intron 60.0%
ATCCCCGTTGGGTATGGGTG+GGG + chr3_4:77815762-77815781 None:intergenic 60.0%
CATCCCCGTTGGGTATGGGT+GGG + chr3_4:77815763-77815782 None:intergenic 60.0%
TCATCCCCGTTGGGTATGGG+TGG + chr3_4:77815764-77815783 None:intergenic 60.0%
ATACCCGAACCCGTCGGTGA+CGG + chr3_4:77815804-77815823 None:intergenic 60.0%
TCGATGCGGGGATGGGTATG+GGG + chr3_4:77815832-77815851 None:intergenic 60.0%
! TGCTTGGGCAGGGCACCAAT+GGG + chr3_4:77818359-77818378 None:intergenic 60.0%
! ATGCTTGGGCAGGGCACCAA+TGG + chr3_4:77818360-77818379 None:intergenic 60.0%
GTCGTCCTCCGTGGCACAAT+CGG + chr3_4:77818640-77818659 None:intergenic 60.0%
CGACGGTGAGGAAGAGACAG+AGG - chr3_4:77818659-77818678 Msa0524330:intron 60.0%
!! AGAGGAAGGTGAGAGTGCCG+CGG - chr3_4:77818677-77818696 Msa0524330:intron 60.0%
TGCGCTGCATCTGACGGAGA+CGG - chr3_4:77818707-77818726 Msa0524330:intron 60.0%
ATAGGCACGGCAATGGGGCG+GGG - chr3_4:77815678-77815697 Msa0524330:intron 65.0%
AACCCCATCCCCGTCACCGA+CGG - chr3_4:77815791-77815810 Msa0524330:intron 65.0%
!! AACCCGTCGGTGACGGGGAT+GGG + chr3_4:77815797-77815816 None:intergenic 65.0%
! ATCCCCGTCACCGACGGGTT+CGG - chr3_4:77815797-77815816 Msa0524330:intron 65.0%
TACCCGAACCCGTCGGTGAC+GGG + chr3_4:77815803-77815822 None:intergenic 65.0%
ATGCGGGGATGGGTATGGGG+CGG + chr3_4:77815829-77815848 None:intergenic 65.0%
!! TTCCGGCGCCGATTGTGCCA+CGG - chr3_4:77818629-77818648 Msa0524330:intron 65.0%
TGTGCCACGGAGGACGACGA+CGG - chr3_4:77818642-77818661 Msa0524330:intron 65.0%
ATGCAGCGCACATTCCGCCG+CGG + chr3_4:77818697-77818716 None:intergenic 65.0%
AGGGGTTGGGTGTGGGAGCT+TGG - chr3_4:77818836-77818855 Msa0524330:CDS 65.0%
ACCCCATCCCCGTCACCGAC+GGG - chr3_4:77815792-77815811 Msa0524330:intron 70.0%
!! ACCCGTCGGTGACGGGGATG+GGG + chr3_4:77815796-77815815 None:intergenic 70.0%
!! GAACCCGTCGGTGACGGGGA+TGG + chr3_4:77815798-77815817 None:intergenic 70.0%
! TCCCCGTCACCGACGGGTTC+GGG - chr3_4:77815798-77815817 Msa0524330:intron 70.0%
ACCCGAACCCGTCGGTGACG+GGG + chr3_4:77815802-77815821 None:intergenic 70.0%
GCGGGGATACCCGAACCCGT+CGG + chr3_4:77815810-77815829 None:intergenic 70.0%
TGCGGGGATGGGTATGGGGC+GGG + chr3_4:77815828-77815847 None:intergenic 70.0%
CTCCGTGGCACAATCGGCGC+CGG + chr3_4:77818634-77818653 None:intergenic 70.0%
CTCACCGTCGTCGTCCTCCG+TGG + chr3_4:77818649-77818668 None:intergenic 70.0%
CACGGAGGACGACGACGGTG+AGG - chr3_4:77818647-77818666 Msa0524330:intron 70.0%
!! GGAAGGTGAGAGTGCCGCGG+CGG - chr3_4:77818680-77818699 Msa0524330:intron 70.0%
GCACGGCAATGGGGCGGGGT+GGG - chr3_4:77815682-77815701 Msa0524330:intron 75.0%
CACGGCAATGGGGCGGGGTG+GGG - chr3_4:77815683-77815702 Msa0524330:intron 75.0%
GCAATGGGGCGGGGTGGGGA+CGG - chr3_4:77815687-77815706 Msa0524330:intron 75.0%
CAATGGGGCGGGGTGGGGAC+GGG - chr3_4:77815688-77815707 Msa0524330:intron 75.0%
GCGGGGATGGGTATGGGGCG+GGG + chr3_4:77815827-77815846 None:intergenic 75.0%
!! CGGCGCCGATTGTGCCACGG+AGG - chr3_4:77818632-77818651 Msa0524330:intron 75.0%
! GGCACGGCAATGGGGCGGGG+TGG - chr3_4:77815681-77815700 Msa0524330:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 77812401 77819206 77812401 ID=Msa0524330;Name=Msa0524330
chr3_4 mRNA 77812401 77819206 77812401 ID=Msa0524330-mRNA-1;Parent=Msa0524330;Name=Msa0524330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=132|1|0.8|1|0.5|0.4|5|1421|395
chr3_4 exon 77812401 77813362 77812401 ID=Msa0524330-mRNA-1:exon:22898;Parent=Msa0524330-mRNA-1
chr3_4 exon 77816768 77818006 77816768 ID=Msa0524330-mRNA-1:exon:22897;Parent=Msa0524330-mRNA-1
chr3_4 exon 77818101 77818273 77818101 ID=Msa0524330-mRNA-1:exon:22896;Parent=Msa0524330-mRNA-1
chr3_4 exon 77818725 77818959 77818725 ID=Msa0524330-mRNA-1:exon:22895;Parent=Msa0524330-mRNA-1
chr3_4 exon 77819075 77819206 77819075 ID=Msa0524330-mRNA-1:exon:22894;Parent=Msa0524330-mRNA-1
chr3_4 five_prime_UTR 77819075 77819206 77819075 ID=Msa0524330-mRNA-1:five_prime_utr;Parent=Msa0524330-mRNA-1
chr3_4 CDS 77818725 77818959 77818725 ID=Msa0524330-mRNA-1:cds;Parent=Msa0524330-mRNA-1
chr3_4 CDS 77818101 77818273 77818101 ID=Msa0524330-mRNA-1:cds;Parent=Msa0524330-mRNA-1
chr3_4 CDS 77817227 77818006 77817227 ID=Msa0524330-mRNA-1:cds;Parent=Msa0524330-mRNA-1
chr3_4 three_prime_UTR 77816768 77817226 77816768 ID=Msa0524330-mRNA-1:three_prime_utr;Parent=Msa0524330-mRNA-1
chr3_4 three_prime_UTR 77812401 77813362 77812401 ID=Msa0524330-mRNA-1:three_prime_utr;Parent=Msa0524330-mRNA-1
Gene Sequence

>Msa0524330

ATGATGTCTAGTAGCAACGGTAGCTGTGCAAATGCTTCAAATCCTTACCATCAATGCACTCAAGCTTGCTCCCAAAAGACAAAGGGAACCAAACCACATCATGTTGCTGCTGGTACTGCAAGTAATAGCAATAATAGAAAGGTTATTAATGGAGGTGAAAGACGTACTTATGCTTCTTCTTGTCCTAAATCATCCAATCCTTATCATAAGTGTGATGCCAATTGCAACAATTCAGGTGCCACTCCTCATTCCAAGATTGATCATAGGAAGAAGGTGGGTTCTAAGCCACAACCTCCTGTTCTTCAAAGTGTTCCACCAACAAAACCACATTATTCTCATAACAAAAACGATGAGATCATTCCTTCTTCTGGCCCAATTTCTGCTCAATTACACATCCCAGATGTTATGCAGCCTAAAGATCAAGTTAAGGATGGTGCTACTGAGGTCCTCCCCAATAAAACTGAAACAAAGAAAGAGGACAAAGTCGCTGCTTCTCATGAAATCGTTCCAGTAACCAATTCTGATGAAACTGGTGAAGGTGGTTCCAAAGATTTTAGTTTCTCTGGCAATCCCCTTCCTCTCCACAACAAAGAAATAGATACTAGTAGCGAAGGAGAAGCAGATAGTGTCAGTGTTGTATCTGAATCCCGTGTTTCAATTGGAAAATACAATGTCAAAGAAAGTTTTGGTTCCATCCTACAAACAATACTTGACAAGTATGGTGATATTGGGGCAAGCTGTGATTTGGAATCAGTTGTAATGAGGTCATATTACATGGAGTGTGTATGCTTTGTGGTCCAAGAATTACAATCTTCTTCCGATTCAATAAGTAAGACCAAAGTGAGTGAATTGTTGGATATTGTTAAGGATGTTGAATCTGCTCATCTTCGTGTAGCATGGTTGCGTAACACACTTGATGAAATTGTTGAAAATATTGAATTGATTAGTCACCATCAGGATATGGAAATGGAAAAGGCTAACTATGATCTTGAAATGGAATCATTGAGAGAACAGCTAGAATCAGAGTTGGAAACATTGGCTCAGAAAGAACAAGAGGTTGCTGATATTAATATCCGAATTCCTGAAATCAGAGATCGTTTGAGCGAGCTTGAGCAGCTCATGTCTTCAGGATTAGTAGATGATCAAACCACGCTACCTATCAAGTCAAAGATAGATCAACTATTATAA
Protein sequence

>Msa0524330

MMSSSNGSCANASNPYHQCTQACSQKTKGTKPHHVAAGTASNSNNRKVINGGERRTYASSCPKSSNPYHKCDANCNNSGATPHSKIDHRKKVGSKPQPPVLQSVPPTKPHYSHNKNDEIIPSSGPISAQLHIPDVMQPKDQVKDGATEVLPNKTETKKEDKVAASHEIVPVTNSDETGEGGSKDFSFSGNPLPLHNKEIDTSSEGEADSVSVVSESRVSIGKYNVKESFGSILQTILDKYGDIGASCDLESVVMRSYYMECVCFVVQELQSSSDSISKTKVSELLDIVKDVESAHLRVAWLRNTLDEIVENIELISHHQDMEMEKANYDLEMESLREQLESELETLAQKEQEVADINIRIPEIRDRLSELEQLMSSGLVDDQTTLPIKSKIDQLL*