AlfalfaGEDB | Msa1367530

M. sativa cultivar zhongmu-4 / Msa1367530

KEGG: -
GO: -
PFAM: PF05278.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1367530	XP_024635319.1	90.176	397	19	5	6	395	3	386	0.0	656

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1367530	G7J8J7	89.924	397	19	6	6	395	3	385	0.0	649

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001380	Msa1367530	0.968160	2.775380e-128	-8.615850e-47
Msa0013280	Msa1367530	0.867343	1.467916e-65	-8.615850e-47
Msa0059900	Msa1367530	0.812675	3.762991e-51	-8.615850e-47
Msa0059910	Msa1367530	0.804405	2.195014e-49	-8.615850e-47
Msa0062180	Msa1367530	0.830660	2.591403e-55	-8.615850e-47
Msa0064140	Msa1367530	0.837936	3.871623e-57	-8.615850e-47
Msa0071480	Msa1367530	0.802858	4.594933e-49	-8.615850e-47
Msa0086560	Msa1367530	0.838288	3.143824e-57	-8.615850e-47
Msa0092410	Msa1367530	0.822736	2.019183e-53	-8.615850e-47
Msa0106530	Msa1367530	0.880633	4.672371e-70	-8.615850e-47
Msa0119430	Msa1367530	0.815716	8.015583e-52	-8.615850e-47
Msa0119440	Msa1367530	0.838395	2.949908e-57	-8.615850e-47
Msa1353890	Msa1367530	0.850120	2.085345e-60	-8.615850e-47
Msa1355510	Msa1367530	0.805145	1.537864e-49	-8.615850e-47
Msa1360020	Msa1367530	0.826109	3.248691e-54	-8.615850e-47
Msa1363810	Msa1367530	0.817006	4.124464e-52	-8.615850e-47
Msa1364080	Msa1367530	0.839512	1.515709e-57	-8.615850e-47
Msa1367530	Msa1376450	0.819644	1.042371e-52	-8.615850e-47
Msa1367530	Msa1378040	0.815545	8.750941e-52	-8.615850e-47
Msa1367530	Msa1379580	0.819110	1.379211e-52	-8.615850e-47
Msa1367530	Msa1389760	0.813528	2.445729e-51	-8.615850e-47
Msa1367530	Msa1398900	0.823982	1.032957e-53	-8.615850e-47
Msa1367530	Msa1405220	0.804295	2.313593e-49	-8.615850e-47
Msa1367530	Msa1405820	0.839360	1.659955e-57	-8.615850e-47
Msa1367530	Msa1408180	0.803967	2.707844e-49	-8.615850e-47
Msa1367530	Msa1408340	0.811264	7.636782e-51	-8.615850e-47
Msa1367530	Msa1420920	0.803891	2.807558e-49	-8.615850e-47
Msa1367530	Msa1424580	0.934074	7.087650e-96	-8.615850e-47
Msa1367530	Msa1424630	0.832724	8.029633e-56	-8.615850e-47
Msa1367530	Msa1430550	0.819439	1.160795e-52	-8.615850e-47
Msa1367530	Msa1433410	0.802188	6.315260e-49	-8.615850e-47
Msa1367530	Msa1448980	0.801522	8.655877e-49	-8.615850e-47
Msa0613150	Msa1367530	0.807134	5.863354e-50	-8.615850e-47
Msa0614920	Msa1367530	0.802856	4.599888e-49	-8.615850e-47
Msa0653880	Msa1367530	0.802615	5.157643e-49	-8.615850e-47
Msa0661720	Msa1367530	0.805336	1.402015e-49	-8.615850e-47
Msa0662580	Msa1367530	0.821202	4.576783e-53	-8.615850e-47
Msa0696100	Msa1367530	0.837867	4.034518e-57	-8.615850e-47
Msa0708310	Msa1367530	0.836330	9.969134e-57	-8.615850e-47
Msa0734940	Msa1367530	0.822454	2.348448e-53	-8.615850e-47
Msa0769720	Msa1367530	0.818386	2.014482e-52	-8.615850e-47
Msa0772740	Msa1367530	0.814727	1.329413e-51	-8.615850e-47
Msa0805910	Msa1367530	0.814160	1.775107e-51	-8.615850e-47
Msa0807670	Msa1367530	0.843071	1.755115e-58	-8.615850e-47
Msa0807680	Msa1367530	0.837460	5.131995e-57	-8.615850e-47
Msa0812950	Msa1367530	0.809414	1.914932e-50	-8.615850e-47
Msa0136630	Msa1367530	0.813226	2.848910e-51	-8.615850e-47
Msa0137860	Msa1367530	0.805862	1.087632e-49	-8.615850e-47
Msa0151220	Msa1367530	0.808823	2.562657e-50	-8.615850e-47
Msa0152560	Msa1367530	0.814960	1.180546e-51	-8.615850e-47
Msa0155210	Msa1367530	0.804991	1.656020e-49	-8.615850e-47
Msa0162690	Msa1367530	0.820549	6.469728e-53	-8.615850e-47
Msa0186320	Msa1367530	0.816685	4.868103e-52	-8.615850e-47
Msa0187310	Msa1367530	0.871232	7.996811e-67	-8.615850e-47
Msa0189610	Msa1367530	0.833872	4.154038e-56	-8.615850e-47
Msa0201530	Msa1367530	0.800249	1.574463e-48	-8.615850e-47
Msa0201570	Msa1367530	0.831889	1.292056e-55	-8.615850e-47
Msa0224130	Msa1367530	0.840177	1.017220e-57	-8.615850e-47
Msa0234590	Msa1367530	0.808116	3.627677e-50	-8.615850e-47
Msa1225100	Msa1367530	0.808824	2.561422e-50	-8.615850e-47
Msa1225580	Msa1367530	0.816731	4.754028e-52	-8.615850e-47
Msa1238690	Msa1367530	0.825443	4.674638e-54	-8.615850e-47
Msa1246700	Msa1367530	0.812423	4.271688e-51	-8.615850e-47
Msa1246780	Msa1367530	0.800479	1.413620e-48	-8.615850e-47
Msa1246790	Msa1367530	0.814848	1.249765e-51	-8.615850e-47
Msa1259860	Msa1367530	0.818947	1.502418e-52	-8.615850e-47
Msa1260680	Msa1367530	0.804862	1.761962e-49	-8.615850e-47
Msa1280150	Msa1367530	0.803409	3.534171e-49	-8.615850e-47
Msa1280170	Msa1367530	0.805984	1.025333e-49	-8.615850e-47
Msa1285200	Msa1367530	0.839715	1.342662e-57	-8.615850e-47
Msa1286220	Msa1367530	0.827194	1.789721e-54	-8.615850e-47
Msa1329870	Msa1367530	0.807837	4.158717e-50	-8.615850e-47
Msa0364790	Msa1367530	0.865096	7.563386e-65	-8.615850e-47
Msa0377840	Msa1367530	0.869054	4.125822e-66	-8.615850e-47
Msa0380600	Msa1367530	0.809717	1.648086e-50	-8.615850e-47
Msa0386010	Msa1367530	0.847822	9.069692e-60	-8.615850e-47
Msa0387660	Msa1367530	0.824152	9.423450e-54	-8.615850e-47
Msa0387690	Msa1367530	0.829418	5.206427e-55	-8.615850e-47
Msa0408340	Msa1367530	0.809034	2.310141e-50	-8.615850e-47
Msa0412260	Msa1367530	0.810530	1.101122e-50	-8.615850e-47
Msa0426560	Msa1367530	0.865868	4.321511e-65	-8.615850e-47
Msa0430240	Msa1367530	0.805529	1.277234e-49	-8.615850e-47
Msa0456770	Msa1367530	0.829821	4.153165e-55	-8.615850e-47
Msa0473140	Msa1367530	0.865724	4.799096e-65	-8.615850e-47
Msa0982780	Msa1367530	0.811203	7.871809e-51	-8.615850e-47
Msa1043120	Msa1367530	0.833429	5.359812e-56	-8.615850e-47
Msa1089190	Msa1367530	0.837364	5.431012e-57	-8.615850e-47
Msa1100930	Msa1367530	0.811495	6.803421e-51	-8.615850e-47
Msa0244190	Msa1367530	0.805913	1.060957e-49	-8.615850e-47
Msa0259440	Msa1367530	0.836342	9.896057e-57	-8.615850e-47
Msa0259580	Msa1367530	0.828058	1.109998e-54	-8.615850e-47
Msa0264680	Msa1367530	0.804575	2.023024e-49	-8.615850e-47
Msa0265270	Msa1367530	0.838058	3.603732e-57	-8.615850e-47
Msa0269560	Msa1367530	0.804035	2.621099e-49	-8.615850e-47
Msa0271550	Msa1367530	0.827903	1.209997e-54	-8.615850e-47
Msa0276430	Msa1367530	0.820852	5.509773e-53	-8.615850e-47
Msa0277410	Msa1367530	0.846156	2.592551e-59	-8.615850e-47
Msa0282720	Msa1367530	0.840820	6.907152e-58	-8.615850e-47
Msa0302730	Msa1367530	0.829510	4.943789e-55	-8.615850e-47
Msa0305620	Msa1367530	0.836580	8.610583e-57	-8.615850e-47
Msa0319290	Msa1367530	0.832615	8.542283e-56	-8.615850e-47
Msa0362160	Msa1367530	0.808833	2.550096e-50	-8.615850e-47
Msa1108720	Msa1367530	0.801992	6.931233e-49	-8.615850e-47
Msa1131790	Msa1367530	0.822408	2.406600e-53	-8.615850e-47
Msa1152410	Msa1367530	0.807052	6.101105e-50	-8.615850e-47
Msa1173490	Msa1367530	0.813721	2.217960e-51	-8.615850e-47
Msa1184790	Msa1367530	0.800124	1.669656e-48	-8.615850e-47
Msa1214170	Msa1367530	0.821250	4.461429e-53	-8.615850e-47
Msa1220880	Msa1367530	0.801657	8.120828e-49	-8.615850e-47
Msa0484800	Msa1367530	0.838924	2.153194e-57	-8.615850e-47
Msa0502780	Msa1367530	0.810296	1.237082e-50	-8.615850e-47
Msa0517610	Msa1367530	0.861919	7.310812e-64	-8.615850e-47
Msa0524330	Msa1367530	0.971328	5.431609e-133	-8.615850e-47
Msa0524440	Msa1367530	0.977155	3.222765e-143	-8.615850e-47
Msa0558390	Msa1367530	0.827323	1.666531e-54	-8.615850e-47
Msa0572560	Msa1367530	0.828815	7.290137e-55	-8.615850e-47
Msa0574570	Msa1367530	0.813881	2.044789e-51	-8.615850e-47
Msa0574600	Msa1367530	0.834589	2.747227e-56	-8.615850e-47
Msa0588710	Msa1367530	0.803774	2.968583e-49	-8.615850e-47
Msa0600590	Msa1367530	0.805846	1.096133e-49	-8.615850e-47
Msa0860250	Msa1367530	0.806595	7.621687e-50	-8.615850e-47
Msa0863720	Msa1367530	0.802036	6.788479e-49	-8.615850e-47
Msa0898320	Msa1367530	0.815907	7.269351e-52	-8.615850e-47
Msa0945130	Msa1367530	0.819805	9.576653e-53	-8.615850e-47
Msa0968050	Msa1367530	0.853692	2.020524e-61	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1367530	MtrunA17_Chr3g0145681	89.924	397	19	6	6	395	3	385	0.0	649
Msa1367530	MtrunA17_Chr1g0211071	47.887	426	165	16	9	394	12	420	1.84e-106	320
Msa1367530	MtrunA17_Chr8g0381111	27.155	232	145	9	111	332	204	421	3.76e-11	64.7
Msa1367530	MtrunA17_Chr8g0381141	27.155	232	145	9	111	332	145	362	7.43e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1367530	AT4G35110.1	31.450	407	228	16	9	395	11	386	7.04e-38	141
Msa1367530	AT4G35110.2	31.450	407	228	16	9	395	11	386	7.04e-38	141
Msa1367530	AT4G35110.6	31.450	407	228	16	9	395	11	386	7.04e-38	141
Msa1367530	AT4G35110.5	31.450	407	228	16	9	395	11	386	7.04e-38	141
Msa1367530	AT4G35110.3	31.450	407	228	16	9	395	26	401	7.27e-38	141
Msa1367530	AT4G35110.4	31.450	407	228	16	9	395	23	398	7.95e-38	141
Msa1367530	AT2G16900.5	39.521	167	94	2	206	371	196	356	7.72e-34	130
Msa1367530	AT2G16900.6	39.521	167	94	2	206	371	196	356	7.72e-34	130
Msa1367530	AT2G16900.1	39.521	167	94	2	206	371	196	356	7.72e-34	130
Msa1367530	AT2G16900.3	39.521	167	94	2	206	371	107	267	1.15e-33	127
Msa1367530	AT2G16900.4	39.521	167	94	2	206	371	107	267	1.15e-33	127
Msa1367530	AT2G16900.2	39.521	167	94	2	206	371	107	267	1.15e-33	127
Msa1367530	AT2G16900.7	39.521	167	94	2	206	371	107	267	1.15e-33	127
Msa1367530	AT2G20960.1	32.432	185	121	3	211	394	557	738	3.51e-28	117
Msa1367530	AT2G20960.4	32.432	185	121	3	211	394	557	738	3.51e-28	117
Msa1367530	AT4G38550.3	33.333	168	111	1	205	371	416	583	3.81e-28	116
Msa1367530	AT4G38550.1	33.333	168	111	1	205	371	416	583	3.81e-28	116
Msa1367530	AT4G38550.5	33.333	168	111	1	205	371	315	482	4.10e-28	115
Msa1367530	AT4G38550.2	33.333	168	111	1	205	371	453	620	4.20e-28	116
Msa1367530	AT2G20960.2	32.432	185	121	3	211	394	522	703	4.45e-28	116
Msa1367530	AT2G20960.3	32.432	185	121	3	211	394	487	668	4.65e-28	116
Msa1367530	AT4G38550.4	33.333	168	111	1	205	371	357	524	4.91e-28	116
Msa1367530	AT4G38560.2	38.889	162	98	1	211	371	332	493	3.97e-27	113
Msa1367530	AT4G38560.1	38.889	162	98	1	211	371	330	491	4.61e-27	113
Msa1367530	AT5G11140.1	34.270	178	113	3	218	394	57	231	6.16e-26	105
Msa1367530	AT2G20950.1	34.161	161	105	1	212	371	332	492	3.18e-22	99.0
Msa1367530	AT2G20950.4	34.161	161	105	1	212	371	334	494	3.72e-22	98.6
Msa1367530	AT2G20950.2	34.161	161	105	1	212	371	315	475	3.99e-22	98.6
Msa1367530	AT2G20950.3	34.161	161	105	1	212	371	317	477	4.34e-22	98.2
Msa1367530	AT2G20950.8	33.529	170	112	1	203	371	350	519	4.40e-22	98.6
Msa1367530	AT2G20950.5	34.161	161	105	1	212	371	196	356	5.00e-22	97.1
Msa1367530	AT2G20950.9	34.161	161	105	1	212	371	196	356	5.00e-22	97.1
Msa1367530	AT2G20950.6	34.161	161	105	1	212	371	286	446	5.28e-22	97.8
Msa1367530	AT2G20950.14	34.161	161	105	1	212	371	288	448	5.59e-22	97.8
Msa1367530	AT2G20950.7	33.529	170	112	1	203	371	350	519	6.20e-22	98.2
Msa1367530	AT2G20950.13	33.529	170	112	1	203	371	306	475	1.19e-21	97.1
Msa1367530	AT2G20950.10	33.529	170	112	1	203	371	306	475	1.19e-21	97.1
Msa1367530	AT2G20950.12	33.529	170	112	1	203	371	272	441	1.28e-21	96.7
Msa1367530	AT2G20950.11	33.529	170	112	1	203	371	216	385	1.34e-21	96.3

Find 102 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGATCAATATGTCATTAAT+TGG	0.195712	tig0018513:-181609	Msa1367530:three_prime_UTR
CTCAAACGATCTCTGATTTC+AGG	0.204618	tig0018513:+182041	None:intergenic
TGATAAGGATTGGATGATTT+AGG	0.249464	tig0018513:+183485	None:intergenic
GTTTGGTTCCCTTTGTCTTT+TGG	0.250491	tig0018513:+183597	None:intergenic
GCCAGAGAAACTAAAATCTT+TGG	0.259330	tig0018513:+182577	None:intergenic
TCAGGAATGGATTTGGCTAT+TGG	0.267801	tig0018513:+181536	None:intergenic
CGGAAGAAGATTGTAATTCT+TGG	0.286432	tig0018513:+182324	None:intergenic
CCATCCTTAACTTGATCTTT+AGG	0.299650	tig0018513:+182710	None:intergenic
CTTGAGCAGCTCATGTCTTC+AGG	0.305135	tig0018513:-182014	Msa1367530:CDS
AATACATTACTCAATAAAAT+TGG	0.312289	tig0018513:-181810	Msa1367530:three_prime_UTR
CTTGACAAGTATGGTGATAT+AGG	0.315358	tig0018513:-182413	Msa1367530:CDS
GATGCCAATTGCAACAATTC+AGG	0.316155	tig0018513:-183455	Msa1367530:intron
TACAATGTCAAAGAAAGTTT+TGG	0.326292	tig0018513:-182455	Msa1367530:CDS
GTTTCATCAGAATTGGTTAC+TGG	0.334578	tig0018513:+182614	None:intergenic
GAAGAAAAGAAATGCAAGTT+TGG	0.336047	tig0018513:+181930	None:intergenic
AATAATAGAAAGGTTATTAA+TGG	0.347675	tig0018513:-183539	Msa1367530:CDS
TTCACCAGTTTCATCAGAAT+TGG	0.348026	tig0018513:+182607	None:intergenic
GATGAGATCATTCCTTCTTC+TGG	0.358336	tig0018513:-182869	Msa1367530:CDS
TTGACAAGTATGGTGATATA+GGG	0.359918	tig0018513:-182412	Msa1367530:CDS
CTTCTTCCTATGATCAATCT+TGG	0.363222	tig0018513:+182967	None:intergenic
ACAGATCGACCAAATACTTT+TGG	0.365016	tig0018513:+181751	None:intergenic
ACTTGTCAAGTATTGTTTGT+AGG	0.367480	tig0018513:+182426	None:intergenic
ATGTGTAATTGAGCAGAAAT+TGG	0.373749	tig0018513:+182845	None:intergenic
CAAACAATACTTGACAAGTA+TGG	0.386291	tig0018513:-182422	Msa1367530:CDS
TCTGAATCCCGTGTTTCAAT+TGG	0.388960	tig0018513:-182482	Msa1367530:CDS
GATCTCTGATTTCAGGAATT+CGG	0.392697	tig0018513:+182048	None:intergenic
TATAGGGGCAAGCTGTGATT+TGG	0.401703	tig0018513:-182396	Msa1367530:CDS
GACCAAAGTGAGTGAATTGT+TGG	0.402832	tig0018513:-182288	Msa1367530:CDS
GATTAGTCACCATCAGGATA+TGG	0.405327	tig0018513:-182180	Msa1367530:CDS
TGATCTATCTTTGACTTGAT+AGG	0.411943	tig0018513:+181966	None:intergenic
GGAACCTGAATTGTTGCAAT+TGG	0.412011	tig0018513:+183451	None:intergenic
GTAACCAATTCTGATGAAAC+TGG	0.417672	tig0018513:-182611	Msa1367530:CDS
ACAACTCATGACGTTGGTTC+TGG	0.424708	tig0018513:+181577	None:intergenic
TGAATTGTTGGATATTGTTA+AGG	0.426225	tig0018513:-182276	Msa1367530:CDS
ATTACACATCCCAGATGTTA+TGG	0.434766	tig0018513:-182831	Msa1367530:intron
GGTGGAACACTTTGAAGAAC+AGG	0.435930	tig0018513:+182923	None:intergenic
AGGGACAGTACCATAACATC+TGG	0.436687	tig0018513:+182821	None:intergenic
AGCAGCAACATGATGTGGTT+TGG	0.440038	tig0018513:+183580	None:intergenic
GGCTAACTATGATCGTGAAA+TGG	0.440278	tig0018513:-182147	Msa1367530:CDS
TCACCATCAGGATATGGAAA+TGG	0.446433	tig0018513:-182174	Msa1367530:CDS
CATGGAGTGTGTATGCTTTG+TGG	0.449719	tig0018513:-182348	Msa1367530:CDS
TTGGCATCACACTTATGATA+AGG	0.450367	tig0018513:+183470	None:intergenic
TAGTATCTATTTCTTTGTTG+TGG	0.469830	tig0018513:+182540	None:intergenic
TGAATTGATTAGTCACCATC+AGG	0.473279	tig0018513:-182186	Msa1367530:CDS
ATCCAACAATTCACTCACTT+TGG	0.473716	tig0018513:+182286	None:intergenic
AATGAATTGAGAAAGATTGA+AGG	0.474070	tig0018513:+183910	None:intergenic
TATAGAAAGACTTTCTATAC+AGG	0.482578	tig0018513:+181641	None:intergenic
TCTTTGTTGTGGAGAGGAAG+GGG	0.483390	tig0018513:+182551	None:intergenic
TTTGGTCTTACTTATTGAAT+CGG	0.484588	tig0018513:+182304	None:intergenic
GCAGCCTAAAGATCAAGTTA+AGG	0.486423	tig0018513:-182714	Msa1367530:CDS
CTTACAACAATTAATTAGCT+AGG	0.492403	tig0018513:+183801	None:intergenic
GTCAAGTATTGTTTGTAGGA+TGG	0.493819	tig0018513:+182430	None:intergenic
GCTTGAGTGCATTGATGGTA+AGG	0.495066	tig0018513:+183626	None:intergenic
TTCTTTGTTGTGGAGAGGAA+GGG	0.496215	tig0018513:+182550	None:intergenic
TGTGTAATTGAGCAGAAATT+GGG	0.497868	tig0018513:+182846	None:intergenic
CTTTGAAGAACAGGAGGTTG+TGG	0.499804	tig0018513:+182932	None:intergenic
TCAGGATATGGAAATGGAAA+AGG	0.500818	tig0018513:-182168	Msa1367530:CDS
TTTCTTTGTTGTGGAGAGGA+AGG	0.502763	tig0018513:+182549	None:intergenic
GAAATAGATACTAGTAGCGA+AGG	0.504275	tig0018513:-182530	Msa1367530:CDS
AGAACAGCTAGAATCAGAGT+TGG	0.506724	tig0018513:-182114	Msa1367530:CDS
TTTCCATTTCCATATCCTGA+TGG	0.507099	tig0018513:+182171	None:intergenic
TAAAACTGAAACAAAGAAAG+AGG	0.508090	tig0018513:-182666	Msa1367530:CDS
GCAGAAATTGGGCCAGAAGA+AGG	0.508734	tig0018513:+182857	None:intergenic
CTCATTCCAAGATTGATCAT+AGG	0.510237	tig0018513:-182973	Msa1367530:CDS
AGCAAGCTTGAGTGCATTGA+TGG	0.510384	tig0018513:+183621	None:intergenic
AAATTGGATGCAAGCAACAT+AGG	0.517141	tig0018513:-181794	Msa1367530:three_prime_UTR
GAAGAAAGAACGATGGAAAG+TGG	0.519653	tig0018513:+183856	None:intergenic
ATCACACTTATGATAAGGAT+TGG	0.522199	tig0018513:+183475	None:intergenic
AAACCACATCATGTTGCTGC+TGG	0.525538	tig0018513:-183578	Msa1367530:CDS
ATGAATTGAGAAAGATTGAA+GGG	0.528679	tig0018513:+183911	None:intergenic
AAAGTATTTGGTCGATCTGT+AGG	0.544091	tig0018513:-181748	Msa1367530:three_prime_UTR
CAAGATTGATCATAGGAAGA+AGG	0.551150	tig0018513:-182966	Msa1367530:CDS
CTGCTCATCTTCGTGTAGCA+TGG	0.552976	tig0018513:-182244	Msa1367530:CDS
AAGTAATAGCAATAATAGAA+AGG	0.561570	tig0018513:-183549	Msa1367530:CDS
AGAATCAGAGTTGGAAACAT+TGG	0.561728	tig0018513:-182105	Msa1367530:CDS
AATAGAAAGGTTATTAATGG+AGG	0.564289	tig0018513:-183536	Msa1367530:CDS
TGTAATGAGGTCATATTACA+TGG	0.570115	tig0018513:-182366	Msa1367530:CDS
GCTTGCTCCCAAAAGACAAA+GGG	0.570196	tig0018513:-183605	Msa1367530:CDS
AGCTTGCTCCCAAAAGACAA+AGG	0.578029	tig0018513:-183606	Msa1367530:CDS
CTATGATCAATCTTGGAATG+AGG	0.584964	tig0018513:+182974	None:intergenic
AAGGAAACTGCTTATCACAT+TGG	0.588505	tig0018513:-181876	Msa1367530:three_prime_UTR
TCTATTTCTTTGTTGTGGAG+AGG	0.590301	tig0018513:+182545	None:intergenic
CTTTGACTTGATAGGTAGCG+TGG	0.591078	tig0018513:+181974	None:intergenic
ACAATTAATTAGCTAGGACT+AGG	0.595508	tig0018513:+183807	None:intergenic
GATTGATCATAGGAAGAAGG+TGG	0.597603	tig0018513:-182963	Msa1367530:CDS
CCTAAAGATCAAGTTAAGGA+TGG	0.613275	tig0018513:-182710	Msa1367530:CDS
ATTTGGAATCAGTTGTAATG+AGG	0.618166	tig0018513:-182379	Msa1367530:CDS
ATCAATCTTGGAATGAGGAG+TGG	0.623309	tig0018513:+182979	None:intergenic
TGACAAGTATGGTGATATAG+GGG	0.624821	tig0018513:-182411	Msa1367530:CDS
ATTGGCTCAGAAAGAACAAG+AGG	0.625513	tig0018513:-182087	Msa1367530:CDS
TAGATGATGTCTAGTAGCAA+CGG	0.628729	tig0018513:-183671	Msa1367530:CDS
AGTTAAGGATGGTGCTACTG+AGG	0.634421	tig0018513:-182699	Msa1367530:CDS
TCTGATGAAACTGGTGAAGG+TGG	0.634531	tig0018513:-182602	Msa1367530:CDS
GTACCAGCAGCAACATGATG+TGG	0.635041	tig0018513:+183575	None:intergenic
AAAGTCACAACTCATGACGT+TGG	0.643038	tig0018513:+181571	None:intergenic
GGGACAGTACCATAACATCT+GGG	0.646171	tig0018513:+182822	None:intergenic
ATTGATCATAGGAAGAAGGT+GGG	0.646766	tig0018513:-182962	Msa1367530:CDS
GGAACACTTTGAAGAACAGG+AGG	0.650409	tig0018513:+182926	None:intergenic
TGAATTGAGAAAGATTGAAG+GGG	0.655447	tig0018513:+183912	None:intergenic
GGATTATGATAGTTATCAAG+CGG	0.670551	tig0018513:+183828	None:intergenic
AATTCTGATGAAACTGGTGA+AGG	0.697682	tig0018513:-182605	Msa1367530:CDS
GGTACAAGAAGAAAGAACGA+TGG	0.756411	tig0018513:+183849	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTACAAAAATAAATAG+AGG	-	tig0018513:182076-182095	Msa1367530:CDS	10.0%
!!!	TTTTTACAAAAATAAATAGA+GGG	-	tig0018513:182077-182096	Msa1367530:CDS	10.0%
!!	TTAATTTAAATTATAAGTGT+TGG	+	tig0018513:182184-182203	None:intergenic	10.0%
!!!	TTATATATGCTTTTTATAAT+TGG	-	tig0018513:183772-183791	Msa1367530:intron	10.0%
!!!	TTTTTTACAAAAATAAATAG+AGG	-	tig0018513:182076-182095	Msa1367530:CDS	10.0%
!!!	TTTTTACAAAAATAAATAGA+GGG	-	tig0018513:182077-182096	Msa1367530:CDS	10.0%
!!	TTAATTTAAATTATAAGTGT+TGG	+	tig0018513:182184-182203	None:intergenic	10.0%
!!!	TTATATATGCTTTTTATAAT+TGG	-	tig0018513:183772-183791	Msa1367530:intron	10.0%
!!	AATAATAGAAAGGTTATTAA+TGG	-	tig0018513:181916-181935	Msa1367530:three_prime_UTR	15.0%
!!!	TTTGGTTTTATATTAACAAA+AGG	+	tig0018513:182668-182687	None:intergenic	15.0%
!!!	ATATATGGTTTATTATCTTT+TGG	+	tig0018513:182686-182705	None:intergenic	15.0%
!!	AATACATTACTCAATAAAAT+TGG	-	tig0018513:183645-183664	Msa1367530:CDS	15.0%
!!	AATAATAGAAAGGTTATTAA+TGG	-	tig0018513:181916-181935	Msa1367530:three_prime_UTR	15.0%
!!!	TTTGGTTTTATATTAACAAA+AGG	+	tig0018513:182668-182687	None:intergenic	15.0%
!!!	ATATATGGTTTATTATCTTT+TGG	+	tig0018513:182686-182705	None:intergenic	15.0%
!!	AATACATTACTCAATAAAAT+TGG	-	tig0018513:183645-183664	Msa1367530:CDS	15.0%
!!	AAGTAATAGCAATAATAGAA+AGG	-	tig0018513:181906-181925	Msa1367530:three_prime_UTR	20.0%
!!!	TTTAAATTATAAGTGTTGGT+TGG	+	tig0018513:182180-182199	None:intergenic	20.0%
!!	ATAAAATAAGATCAAATTGC+AGG	-	tig0018513:182451-182470	Msa1367530:CDS	20.0%
!!!	TTTTTGTTATGAGAATAATG+TGG	+	tig0018513:182565-182584	None:intergenic	20.0%
!!!	TTCTTTGTTTCAGTTTTATT+GGG	+	tig0018513:182787-182806	None:intergenic	20.0%
!!!	TTTCTTTGTTTCAGTTTTAT+TGG	+	tig0018513:182788-182807	None:intergenic	20.0%
!!	AAGATCAATATGTCATTAAT+TGG	-	tig0018513:183846-183865	Msa1367530:five_prime_UTR	20.0%
!!	AAGTAATAGCAATAATAGAA+AGG	-	tig0018513:181906-181925	Msa1367530:three_prime_UTR	20.0%
!!!	TTTAAATTATAAGTGTTGGT+TGG	+	tig0018513:182180-182199	None:intergenic	20.0%
!!	ATAAAATAAGATCAAATTGC+AGG	-	tig0018513:182451-182470	Msa1367530:CDS	20.0%
!!!	TTTTTGTTATGAGAATAATG+TGG	+	tig0018513:182565-182584	None:intergenic	20.0%
!!!	TTCTTTGTTTCAGTTTTATT+GGG	+	tig0018513:182787-182806	None:intergenic	20.0%
!!!	TTTCTTTGTTTCAGTTTTAT+TGG	+	tig0018513:182788-182807	None:intergenic	20.0%
!!	AAGATCAATATGTCATTAAT+TGG	-	tig0018513:183846-183865	Msa1367530:five_prime_UTR	20.0%
!	ATGAATTGAGAAAGATTGAA+GGG	+	tig0018513:181547-181566	None:intergenic	25.0%
!	AATGAATTGAGAAAGATTGA+AGG	+	tig0018513:181548-181567	None:intergenic	25.0%
!	CTTACAACAATTAATTAGCT+AGG	+	tig0018513:181657-181676	None:intergenic	25.0%
!	AAATCCAACTAGAAAGAAAT+TGG	-	tig0018513:181716-181735	Msa1367530:three_prime_UTR	25.0%
!	AATCCAACTAGAAAGAAATT+GGG	-	tig0018513:181717-181736	Msa1367530:three_prime_UTR	25.0%
!	AATAGAAAGGTTATTAATGG+AGG	-	tig0018513:181919-181938	Msa1367530:three_prime_UTR	25.0%
!	AATAGAGGGTTTATGAAAAA+TGG	-	tig0018513:182091-182110	Msa1367530:CDS	25.0%
!	TATTAGATTGAATACGTTAG+TGG	+	tig0018513:182131-182150	None:intergenic	25.0%
!	AATGAAATGGTCAAACAAAA+TGG	+	tig0018513:182304-182323	None:intergenic	25.0%
!	TTAACAAAAGGTTGTGTAAA+GGG	+	tig0018513:182656-182675	None:intergenic	25.0%
!	ATTAACAAAAGGTTGTGTAA+AGG	+	tig0018513:182657-182676	None:intergenic	25.0%
!!!	TCTTTGTTTCAGTTTTATTG+GGG	+	tig0018513:182786-182805	None:intergenic	25.0%
!	TAAAACTGAAACAAAGAAAG+AGG	-	tig0018513:182789-182808	Msa1367530:intron	25.0%
!!	TAGTATCTATTTCTTTGTTG+TGG	+	tig0018513:182918-182937	None:intergenic	25.0%
!!	TGTATTTTCCAATTGAAACA+CGG	+	tig0018513:182984-183003	None:intergenic	25.0%
!!	TACAATGTCAAAGAAAGTTT+TGG	-	tig0018513:183000-183019	Msa1367530:intron	25.0%
!!!	TTTGGTCTTACTTATTGAAT+CGG	+	tig0018513:183154-183173	None:intergenic	25.0%
!	TGAATTGTTGGATATTGTTA+AGG	-	tig0018513:183179-183198	Msa1367530:intron	25.0%
!!!	TTTTTTCCTGTTTTTGTTTG+AGG	-	tig0018513:183553-183572	Msa1367530:CDS	25.0%
!!!	TTTTTCCTGTTTTTGTTTGA+GGG	-	tig0018513:183554-183573	Msa1367530:CDS	25.0%
!!!	TCTTTTATGCCAAAAGTATT+TGG	-	tig0018513:183695-183714	Msa1367530:intron	25.0%
!	TATAGAAAGACTTTCTATAC+AGG	+	tig0018513:183817-183836	None:intergenic	25.0%
!	ATGAATTGAGAAAGATTGAA+GGG	+	tig0018513:181547-181566	None:intergenic	25.0%
!	AATGAATTGAGAAAGATTGA+AGG	+	tig0018513:181548-181567	None:intergenic	25.0%
!	CTTACAACAATTAATTAGCT+AGG	+	tig0018513:181657-181676	None:intergenic	25.0%
!	AAATCCAACTAGAAAGAAAT+TGG	-	tig0018513:181716-181735	Msa1367530:three_prime_UTR	25.0%
!	AATCCAACTAGAAAGAAATT+GGG	-	tig0018513:181717-181736	Msa1367530:three_prime_UTR	25.0%
!	AATAGAAAGGTTATTAATGG+AGG	-	tig0018513:181919-181938	Msa1367530:three_prime_UTR	25.0%
!	AATAGAGGGTTTATGAAAAA+TGG	-	tig0018513:182091-182110	Msa1367530:CDS	25.0%
!	TATTAGATTGAATACGTTAG+TGG	+	tig0018513:182131-182150	None:intergenic	25.0%
!	AATGAAATGGTCAAACAAAA+TGG	+	tig0018513:182304-182323	None:intergenic	25.0%
!	TTAACAAAAGGTTGTGTAAA+GGG	+	tig0018513:182656-182675	None:intergenic	25.0%
!	ATTAACAAAAGGTTGTGTAA+AGG	+	tig0018513:182657-182676	None:intergenic	25.0%
!!!	TCTTTGTTTCAGTTTTATTG+GGG	+	tig0018513:182786-182805	None:intergenic	25.0%
!	TAAAACTGAAACAAAGAAAG+AGG	-	tig0018513:182789-182808	Msa1367530:intron	25.0%
!!	TAGTATCTATTTCTTTGTTG+TGG	+	tig0018513:182918-182937	None:intergenic	25.0%
!!	TGTATTTTCCAATTGAAACA+CGG	+	tig0018513:182984-183003	None:intergenic	25.0%
!!	TACAATGTCAAAGAAAGTTT+TGG	-	tig0018513:183000-183019	Msa1367530:intron	25.0%
!!!	TTTGGTCTTACTTATTGAAT+CGG	+	tig0018513:183154-183173	None:intergenic	25.0%
!	TGAATTGTTGGATATTGTTA+AGG	-	tig0018513:183179-183198	Msa1367530:intron	25.0%
!!!	TTTTTTCCTGTTTTTGTTTG+AGG	-	tig0018513:183553-183572	Msa1367530:CDS	25.0%
!!!	TTTTTCCTGTTTTTGTTTGA+GGG	-	tig0018513:183554-183573	Msa1367530:CDS	25.0%
!!!	TCTTTTATGCCAAAAGTATT+TGG	-	tig0018513:183695-183714	Msa1367530:intron	25.0%
!	TATAGAAAGACTTTCTATAC+AGG	+	tig0018513:183817-183836	None:intergenic	25.0%
	TGAATTGAGAAAGATTGAAG+GGG	+	tig0018513:181546-181565	None:intergenic	30.0%
	GGATTATGATAGTTATCAAG+CGG	+	tig0018513:181630-181649	None:intergenic	30.0%
	ACAATTAATTAGCTAGGACT+AGG	+	tig0018513:181651-181670	None:intergenic	30.0%
!	ATACCCAATTTCTTTCTAGT+TGG	+	tig0018513:181723-181742	None:intergenic	30.0%
	TGATAAGGATTGGATGATTT+AGG	+	tig0018513:181973-181992	None:intergenic	30.0%
	ATCACACTTATGATAAGGAT+TGG	+	tig0018513:181983-182002	None:intergenic	30.0%
	GTTTGACCATTTCATTAGAA+TGG	-	tig0018513:182308-182327	Msa1367530:CDS	30.0%
	ACCATTTCATTAGAATGGAT+TGG	-	tig0018513:182313-182332	Msa1367530:CDS	30.0%
	ACCAATCCATTCTAATGAAA+TGG	+	tig0018513:182317-182336	None:intergenic	30.0%
!!!	TGAGAATAATGTGGTTTTGT+TGG	+	tig0018513:182556-182575	None:intergenic	30.0%
	TGTGTAATTGAGCAGAAATT+GGG	+	tig0018513:182612-182631	None:intergenic	30.0%
	ATGTGTAATTGAGCAGAAAT+TGG	+	tig0018513:182613-182632	None:intergenic	30.0%
!!!	TCCAAAGATTTTAGTTTCTC+TGG	-	tig0018513:182877-182896	Msa1367530:CDS	30.0%
!	GTATTTTCCAATTGAAACAC+GGG	+	tig0018513:182983-183002	None:intergenic	30.0%
!	ACTTGTCAAGTATTGTTTGT+AGG	+	tig0018513:183032-183051	None:intergenic	30.0%
	CAAACAATACTTGACAAGTA+TGG	-	tig0018513:183033-183052	Msa1367530:intron	30.0%
	TTGACAAGTATGGTGATATA+GGG	-	tig0018513:183043-183062	Msa1367530:intron	30.0%
!	ATTTGGAATCAGTTGTAATG+AGG	-	tig0018513:183076-183095	Msa1367530:intron	30.0%
	TGTAATGAGGTCATATTACA+TGG	-	tig0018513:183089-183108	Msa1367530:intron	30.0%
!!	TGATCTATCTTTGACTTGAT+AGG	+	tig0018513:183492-183511	None:intergenic	30.0%
	GAAGAAAAGAAATGCAAGTT+TGG	+	tig0018513:183528-183547	None:intergenic	30.0%
	TGAATTGAGAAAGATTGAAG+GGG	+	tig0018513:181546-181565	None:intergenic	30.0%
	GGATTATGATAGTTATCAAG+CGG	+	tig0018513:181630-181649	None:intergenic	30.0%
	ACAATTAATTAGCTAGGACT+AGG	+	tig0018513:181651-181670	None:intergenic	30.0%
!	ATACCCAATTTCTTTCTAGT+TGG	+	tig0018513:181723-181742	None:intergenic	30.0%
	TGATAAGGATTGGATGATTT+AGG	+	tig0018513:181973-181992	None:intergenic	30.0%
	ATCACACTTATGATAAGGAT+TGG	+	tig0018513:181983-182002	None:intergenic	30.0%
	GTTTGACCATTTCATTAGAA+TGG	-	tig0018513:182308-182327	Msa1367530:CDS	30.0%
	ACCATTTCATTAGAATGGAT+TGG	-	tig0018513:182313-182332	Msa1367530:CDS	30.0%
	ACCAATCCATTCTAATGAAA+TGG	+	tig0018513:182317-182336	None:intergenic	30.0%
!!!	TGAGAATAATGTGGTTTTGT+TGG	+	tig0018513:182556-182575	None:intergenic	30.0%
	TGTGTAATTGAGCAGAAATT+GGG	+	tig0018513:182612-182631	None:intergenic	30.0%
	ATGTGTAATTGAGCAGAAAT+TGG	+	tig0018513:182613-182632	None:intergenic	30.0%
!!!	TCCAAAGATTTTAGTTTCTC+TGG	-	tig0018513:182877-182896	Msa1367530:CDS	30.0%
!	GTATTTTCCAATTGAAACAC+GGG	+	tig0018513:182983-183002	None:intergenic	30.0%
!	ACTTGTCAAGTATTGTTTGT+AGG	+	tig0018513:183032-183051	None:intergenic	30.0%
	CAAACAATACTTGACAAGTA+TGG	-	tig0018513:183033-183052	Msa1367530:intron	30.0%
	TTGACAAGTATGGTGATATA+GGG	-	tig0018513:183043-183062	Msa1367530:intron	30.0%
!	ATTTGGAATCAGTTGTAATG+AGG	-	tig0018513:183076-183095	Msa1367530:intron	30.0%
	TGTAATGAGGTCATATTACA+TGG	-	tig0018513:183089-183108	Msa1367530:intron	30.0%
!!	TGATCTATCTTTGACTTGAT+AGG	+	tig0018513:183492-183511	None:intergenic	30.0%
	GAAGAAAAGAAATGCAAGTT+TGG	+	tig0018513:183528-183547	None:intergenic	30.0%
	TAGATGATGTCTAGTAGCAA+CGG	-	tig0018513:181784-181803	Msa1367530:three_prime_UTR	35.0%
!!	TTTGGTTCCCTTTGTCTTTT+GGG	+	tig0018513:181860-181879	None:intergenic	35.0%
	TTGGCATCACACTTATGATA+AGG	+	tig0018513:181988-182007	None:intergenic	35.0%
	CGTTTACATGTGTAGTAAGT+AGG	-	tig0018513:182265-182284	Msa1367530:CDS	35.0%
	TGCAGGAGATAAAAATGTGT+TGG	+	tig0018513:182353-182372	None:intergenic	35.0%
	CTATGATCAATCTTGGAATG+AGG	+	tig0018513:182484-182503	None:intergenic	35.0%
	CTCATTCCAAGATTGATCAT+AGG	-	tig0018513:182482-182501	Msa1367530:CDS	35.0%
	CTTCTTCCTATGATCAATCT+TGG	+	tig0018513:182491-182510	None:intergenic	35.0%
	CAAGATTGATCATAGGAAGA+AGG	-	tig0018513:182489-182508	Msa1367530:CDS	35.0%
	ATTGATCATAGGAAGAAGGT+GGG	-	tig0018513:182493-182512	Msa1367530:CDS	35.0%
!!!	GAATAATGTGGTTTTGTTGG+TGG	+	tig0018513:182553-182572	None:intergenic	35.0%
	ATTACACATCCCAGATGTTA+TGG	-	tig0018513:182624-182643	Msa1367530:CDS	35.0%
!	CCATCCTTAACTTGATCTTT+AGG	+	tig0018513:182748-182767	None:intergenic	35.0%
	CCTAAAGATCAAGTTAAGGA+TGG	-	tig0018513:182745-182764	Msa1367530:intron	35.0%
!!!	TTGTTTCAGTTTTATTGGGG+AGG	+	tig0018513:182783-182802	None:intergenic	35.0%
	GTTTCATCAGAATTGGTTAC+TGG	+	tig0018513:182844-182863	None:intergenic	35.0%
	GTAACCAATTCTGATGAAAC+TGG	-	tig0018513:182844-182863	Msa1367530:CDS	35.0%
	TTCACCAGTTTCATCAGAAT+TGG	+	tig0018513:182851-182870	None:intergenic	35.0%
	AATTCTGATGAAACTGGTGA+AGG	-	tig0018513:182850-182869	Msa1367530:CDS	35.0%
	GCCAGAGAAACTAAAATCTT+TGG	+	tig0018513:182881-182900	None:intergenic	35.0%
!	TCTATTTCTTTGTTGTGGAG+AGG	+	tig0018513:182913-182932	None:intergenic	35.0%
	GAAATAGATACTAGTAGCGA+AGG	-	tig0018513:182925-182944	Msa1367530:CDS	35.0%
!	GTCAAGTATTGTTTGTAGGA+TGG	+	tig0018513:183028-183047	None:intergenic	35.0%
	CTTGACAAGTATGGTGATAT+AGG	-	tig0018513:183042-183061	Msa1367530:intron	35.0%
	TGACAAGTATGGTGATATAG+GGG	-	tig0018513:183044-183063	Msa1367530:intron	35.0%
	CGGAAGAAGATTGTAATTCT+TGG	+	tig0018513:183134-183153	None:intergenic	35.0%
	ATCCAACAATTCACTCACTT+TGG	+	tig0018513:183172-183191	None:intergenic	35.0%
!	TGAATTGATTAGTCACCATC+AGG	-	tig0018513:183269-183288	Msa1367530:intron	35.0%
	TTTCCATTTCCATATCCTGA+TGG	+	tig0018513:183287-183306	None:intergenic	35.0%
	TCAGGATATGGAAATGGAAA+AGG	-	tig0018513:183287-183306	Msa1367530:intron	35.0%
	AGAATCAGAGTTGGAAACAT+TGG	-	tig0018513:183350-183369	Msa1367530:intron	35.0%
	GATCTCTGATTTCAGGAATT+CGG	+	tig0018513:183410-183429	None:intergenic	35.0%
	CTTAACCCTCAAACAAAAAC+AGG	+	tig0018513:183562-183581	None:intergenic	35.0%
!!!	CTGTTTTTGTTTGAGGGTTA+AGG	-	tig0018513:183560-183579	Msa1367530:CDS	35.0%
	AAGGAAACTGCTTATCACAT+TGG	-	tig0018513:183579-183598	Msa1367530:CDS	35.0%
	AAATTGGATGCAAGCAACAT+AGG	-	tig0018513:183661-183680	Msa1367530:CDS	35.0%
!	ACAGATCGACCAAATACTTT+TGG	+	tig0018513:183707-183726	None:intergenic	35.0%
!	AAAGTATTTGGTCGATCTGT+AGG	-	tig0018513:183707-183726	Msa1367530:intron	35.0%
	TAGATGATGTCTAGTAGCAA+CGG	-	tig0018513:181784-181803	Msa1367530:three_prime_UTR	35.0%
!!	TTTGGTTCCCTTTGTCTTTT+GGG	+	tig0018513:181860-181879	None:intergenic	35.0%
	TTGGCATCACACTTATGATA+AGG	+	tig0018513:181988-182007	None:intergenic	35.0%
	CGTTTACATGTGTAGTAAGT+AGG	-	tig0018513:182265-182284	Msa1367530:CDS	35.0%
	TGCAGGAGATAAAAATGTGT+TGG	+	tig0018513:182353-182372	None:intergenic	35.0%
	CTATGATCAATCTTGGAATG+AGG	+	tig0018513:182484-182503	None:intergenic	35.0%
	CTCATTCCAAGATTGATCAT+AGG	-	tig0018513:182482-182501	Msa1367530:CDS	35.0%
	CTTCTTCCTATGATCAATCT+TGG	+	tig0018513:182491-182510	None:intergenic	35.0%
	CAAGATTGATCATAGGAAGA+AGG	-	tig0018513:182489-182508	Msa1367530:CDS	35.0%
	ATTGATCATAGGAAGAAGGT+GGG	-	tig0018513:182493-182512	Msa1367530:CDS	35.0%
!!!	GAATAATGTGGTTTTGTTGG+TGG	+	tig0018513:182553-182572	None:intergenic	35.0%
	ATTACACATCCCAGATGTTA+TGG	-	tig0018513:182624-182643	Msa1367530:CDS	35.0%
!	CCATCCTTAACTTGATCTTT+AGG	+	tig0018513:182748-182767	None:intergenic	35.0%
	CCTAAAGATCAAGTTAAGGA+TGG	-	tig0018513:182745-182764	Msa1367530:intron	35.0%
!!!	TTGTTTCAGTTTTATTGGGG+AGG	+	tig0018513:182783-182802	None:intergenic	35.0%
	GTTTCATCAGAATTGGTTAC+TGG	+	tig0018513:182844-182863	None:intergenic	35.0%
	GTAACCAATTCTGATGAAAC+TGG	-	tig0018513:182844-182863	Msa1367530:CDS	35.0%
	TTCACCAGTTTCATCAGAAT+TGG	+	tig0018513:182851-182870	None:intergenic	35.0%
	AATTCTGATGAAACTGGTGA+AGG	-	tig0018513:182850-182869	Msa1367530:CDS	35.0%
	GCCAGAGAAACTAAAATCTT+TGG	+	tig0018513:182881-182900	None:intergenic	35.0%
!	TCTATTTCTTTGTTGTGGAG+AGG	+	tig0018513:182913-182932	None:intergenic	35.0%
	GAAATAGATACTAGTAGCGA+AGG	-	tig0018513:182925-182944	Msa1367530:CDS	35.0%
!	GTCAAGTATTGTTTGTAGGA+TGG	+	tig0018513:183028-183047	None:intergenic	35.0%
	CTTGACAAGTATGGTGATAT+AGG	-	tig0018513:183042-183061	Msa1367530:intron	35.0%
	TGACAAGTATGGTGATATAG+GGG	-	tig0018513:183044-183063	Msa1367530:intron	35.0%
	CGGAAGAAGATTGTAATTCT+TGG	+	tig0018513:183134-183153	None:intergenic	35.0%
	ATCCAACAATTCACTCACTT+TGG	+	tig0018513:183172-183191	None:intergenic	35.0%
!	TGAATTGATTAGTCACCATC+AGG	-	tig0018513:183269-183288	Msa1367530:intron	35.0%
	TTTCCATTTCCATATCCTGA+TGG	+	tig0018513:183287-183306	None:intergenic	35.0%
	TCAGGATATGGAAATGGAAA+AGG	-	tig0018513:183287-183306	Msa1367530:intron	35.0%
	AGAATCAGAGTTGGAAACAT+TGG	-	tig0018513:183350-183369	Msa1367530:intron	35.0%
	GATCTCTGATTTCAGGAATT+CGG	+	tig0018513:183410-183429	None:intergenic	35.0%
	CTTAACCCTCAAACAAAAAC+AGG	+	tig0018513:183562-183581	None:intergenic	35.0%
!!!	CTGTTTTTGTTTGAGGGTTA+AGG	-	tig0018513:183560-183579	Msa1367530:CDS	35.0%
	AAGGAAACTGCTTATCACAT+TGG	-	tig0018513:183579-183598	Msa1367530:CDS	35.0%
	AAATTGGATGCAAGCAACAT+AGG	-	tig0018513:183661-183680	Msa1367530:CDS	35.0%
!	ACAGATCGACCAAATACTTT+TGG	+	tig0018513:183707-183726	None:intergenic	35.0%
!	AAAGTATTTGGTCGATCTGT+AGG	-	tig0018513:183707-183726	Msa1367530:intron	35.0%
	GAAGAAAGAACGATGGAAAG+TGG	+	tig0018513:181602-181621	None:intergenic	40.0%
	GGTACAAGAAGAAAGAACGA+TGG	+	tig0018513:181609-181628	None:intergenic	40.0%
!!	GTTTGGTTCCCTTTGTCTTT+TGG	+	tig0018513:181861-181880	None:intergenic	40.0%
	GATGCCAATTGCAACAATTC+AGG	-	tig0018513:182000-182019	Msa1367530:CDS	40.0%
	GGAACCTGAATTGTTGCAAT+TGG	+	tig0018513:182007-182026	None:intergenic	40.0%
	TGTAATGACACAATGAGTGC+AGG	+	tig0018513:182370-182389	None:intergenic	40.0%
	ATCAATCTTGGAATGAGGAG+TGG	+	tig0018513:182479-182498	None:intergenic	40.0%
	GATTGATCATAGGAAGAAGG+TGG	-	tig0018513:182492-182511	Msa1367530:CDS	40.0%
	GATGAGATCATTCCTTCTTC+TGG	-	tig0018513:182586-182605	Msa1367530:CDS	40.0%
	GCAGCCTAAAGATCAAGTTA+AGG	-	tig0018513:182741-182760	Msa1367530:intron	40.0%
!	TTCTTTGTTGTGGAGAGGAA+GGG	+	tig0018513:182908-182927	None:intergenic	40.0%
!	TTTCTTTGTTGTGGAGAGGA+AGG	+	tig0018513:182909-182928	None:intergenic	40.0%
	TCTGAATCCCGTGTTTCAAT+TGG	-	tig0018513:182973-182992	Msa1367530:CDS	40.0%
	GACCAAAGTGAGTGAATTGT+TGG	-	tig0018513:183167-183186	Msa1367530:intron	40.0%
!	GATTAGTCACCATCAGGATA+TGG	-	tig0018513:183275-183294	Msa1367530:intron	40.0%
	TCACCATCAGGATATGGAAA+TGG	-	tig0018513:183281-183300	Msa1367530:intron	40.0%
	GGCTAACTATGATCGTGAAA+TGG	-	tig0018513:183308-183327	Msa1367530:intron	40.0%
	AGAACAGCTAGAATCAGAGT+TGG	-	tig0018513:183341-183360	Msa1367530:intron	40.0%
!	ATTGGCTCAGAAAGAACAAG+AGG	-	tig0018513:183368-183387	Msa1367530:intron	40.0%
	CTCAAACGATCTCTGATTTC+AGG	+	tig0018513:183417-183436	None:intergenic	40.0%
	AAAGTCACAACTCATGACGT+TGG	+	tig0018513:183887-183906	None:intergenic	40.0%
!	TCAGGAATGGATTTGGCTAT+TGG	+	tig0018513:183922-183941	None:intergenic	40.0%
	GCCAAATCCATTCCTGAATT+TGG	-	tig0018513:183925-183944	Msa1367530:five_prime_UTR	40.0%
	GAAGAAAGAACGATGGAAAG+TGG	+	tig0018513:181602-181621	None:intergenic	40.0%
	GGTACAAGAAGAAAGAACGA+TGG	+	tig0018513:181609-181628	None:intergenic	40.0%
!!	GTTTGGTTCCCTTTGTCTTT+TGG	+	tig0018513:181861-181880	None:intergenic	40.0%
	GATGCCAATTGCAACAATTC+AGG	-	tig0018513:182000-182019	Msa1367530:CDS	40.0%
	GGAACCTGAATTGTTGCAAT+TGG	+	tig0018513:182007-182026	None:intergenic	40.0%
	TGTAATGACACAATGAGTGC+AGG	+	tig0018513:182370-182389	None:intergenic	40.0%
	ATCAATCTTGGAATGAGGAG+TGG	+	tig0018513:182479-182498	None:intergenic	40.0%
	GATTGATCATAGGAAGAAGG+TGG	-	tig0018513:182492-182511	Msa1367530:CDS	40.0%
	GATGAGATCATTCCTTCTTC+TGG	-	tig0018513:182586-182605	Msa1367530:CDS	40.0%
	GCAGCCTAAAGATCAAGTTA+AGG	-	tig0018513:182741-182760	Msa1367530:intron	40.0%
!	TTCTTTGTTGTGGAGAGGAA+GGG	+	tig0018513:182908-182927	None:intergenic	40.0%
!	TTTCTTTGTTGTGGAGAGGA+AGG	+	tig0018513:182909-182928	None:intergenic	40.0%
	TCTGAATCCCGTGTTTCAAT+TGG	-	tig0018513:182973-182992	Msa1367530:CDS	40.0%
	GACCAAAGTGAGTGAATTGT+TGG	-	tig0018513:183167-183186	Msa1367530:intron	40.0%
!	GATTAGTCACCATCAGGATA+TGG	-	tig0018513:183275-183294	Msa1367530:intron	40.0%
	TCACCATCAGGATATGGAAA+TGG	-	tig0018513:183281-183300	Msa1367530:intron	40.0%
	GGCTAACTATGATCGTGAAA+TGG	-	tig0018513:183308-183327	Msa1367530:intron	40.0%
	AGAACAGCTAGAATCAGAGT+TGG	-	tig0018513:183341-183360	Msa1367530:intron	40.0%
!	ATTGGCTCAGAAAGAACAAG+AGG	-	tig0018513:183368-183387	Msa1367530:intron	40.0%
	CTCAAACGATCTCTGATTTC+AGG	+	tig0018513:183417-183436	None:intergenic	40.0%
	AAAGTCACAACTCATGACGT+TGG	+	tig0018513:183887-183906	None:intergenic	40.0%
!	TCAGGAATGGATTTGGCTAT+TGG	+	tig0018513:183922-183941	None:intergenic	40.0%
!	GCTTGAGTGCATTGATGGTA+AGG	+	tig0018513:181832-181851	None:intergenic	45.0%
	AGCAAGCTTGAGTGCATTGA+TGG	+	tig0018513:181837-181856	None:intergenic	45.0%
!	AGCTTGCTCCCAAAAGACAA+AGG	-	tig0018513:181849-181868	Msa1367530:three_prime_UTR	45.0%
	GCTTGCTCCCAAAAGACAAA+GGG	-	tig0018513:181850-181869	Msa1367530:three_prime_UTR	45.0%
	AGCAGCAACATGATGTGGTT+TGG	+	tig0018513:181878-181897	None:intergenic	45.0%
	AAACCACATCATGTTGCTGC+TGG	-	tig0018513:181877-181896	Msa1367530:three_prime_UTR	45.0%
	CATGTGTAGTAAGTAGGTGC+AGG	-	tig0018513:182271-182290	Msa1367530:CDS	45.0%
!	CTTTGAAGAACAGGAGGTTG+TGG	+	tig0018513:182526-182545	None:intergenic	45.0%
!	GGAACACTTTGAAGAACAGG+AGG	+	tig0018513:182532-182551	None:intergenic	45.0%
!	GGTGGAACACTTTGAAGAAC+AGG	+	tig0018513:182535-182554	None:intergenic	45.0%
	GGGACAGTACCATAACATCT+GGG	+	tig0018513:182636-182655	None:intergenic	45.0%
	AGGGACAGTACCATAACATC+TGG	+	tig0018513:182637-182656	None:intergenic	45.0%
!!	AGTTAAGGATGGTGCTACTG+AGG	-	tig0018513:182756-182775	Msa1367530:intron	45.0%
	TCTGATGAAACTGGTGAAGG+TGG	-	tig0018513:182853-182872	Msa1367530:CDS	45.0%
!	TCTTTGTTGTGGAGAGGAAG+GGG	+	tig0018513:182907-182926	None:intergenic	45.0%
	TATAGGGGCAAGCTGTGATT+TGG	-	tig0018513:183059-183078	Msa1367530:intron	45.0%
	CATGGAGTGTGTATGCTTTG+TGG	-	tig0018513:183107-183126	Msa1367530:intron	45.0%
!!	CTTTGACTTGATAGGTAGCG+TGG	+	tig0018513:183484-183503	None:intergenic	45.0%
!!	ACAACTCATGACGTTGGTTC+TGG	+	tig0018513:183881-183900	None:intergenic	45.0%
!	GCTTGAGTGCATTGATGGTA+AGG	+	tig0018513:181832-181851	None:intergenic	45.0%
	AGCAAGCTTGAGTGCATTGA+TGG	+	tig0018513:181837-181856	None:intergenic	45.0%
!	AGCTTGCTCCCAAAAGACAA+AGG	-	tig0018513:181849-181868	Msa1367530:three_prime_UTR	45.0%
	GCTTGCTCCCAAAAGACAAA+GGG	-	tig0018513:181850-181869	Msa1367530:three_prime_UTR	45.0%
	AGCAGCAACATGATGTGGTT+TGG	+	tig0018513:181878-181897	None:intergenic	45.0%
	AAACCACATCATGTTGCTGC+TGG	-	tig0018513:181877-181896	Msa1367530:three_prime_UTR	45.0%
	CATGTGTAGTAAGTAGGTGC+AGG	-	tig0018513:182271-182290	Msa1367530:CDS	45.0%
!	CTTTGAAGAACAGGAGGTTG+TGG	+	tig0018513:182526-182545	None:intergenic	45.0%
!	GGAACACTTTGAAGAACAGG+AGG	+	tig0018513:182532-182551	None:intergenic	45.0%
!	GGTGGAACACTTTGAAGAAC+AGG	+	tig0018513:182535-182554	None:intergenic	45.0%
	GGGACAGTACCATAACATCT+GGG	+	tig0018513:182636-182655	None:intergenic	45.0%
	AGGGACAGTACCATAACATC+TGG	+	tig0018513:182637-182656	None:intergenic	45.0%
!!	AGTTAAGGATGGTGCTACTG+AGG	-	tig0018513:182756-182775	Msa1367530:intron	45.0%
	TCTGATGAAACTGGTGAAGG+TGG	-	tig0018513:182853-182872	Msa1367530:CDS	45.0%
!	TCTTTGTTGTGGAGAGGAAG+GGG	+	tig0018513:182907-182926	None:intergenic	45.0%
	TATAGGGGCAAGCTGTGATT+TGG	-	tig0018513:183059-183078	Msa1367530:intron	45.0%
	CATGGAGTGTGTATGCTTTG+TGG	-	tig0018513:183107-183126	Msa1367530:intron	45.0%
!!	CTTTGACTTGATAGGTAGCG+TGG	+	tig0018513:183484-183503	None:intergenic	45.0%
!!	ACAACTCATGACGTTGGTTC+TGG	+	tig0018513:183881-183900	None:intergenic	45.0%
!!	TGTTTAAATATATATATATA+TGG	+	tig0018513:182701-182720	None:intergenic	5.0%
!!	TGTTTAAATATATATATATA+TGG	+	tig0018513:182701-182720	None:intergenic	5.0%
	GTACCAGCAGCAACATGATG+TGG	+	tig0018513:181883-181902	None:intergenic	50.0%
	AGAGAGAGAGAGAGAGAGAG+AGG	+	tig0018513:182029-182048	None:intergenic	50.0%
	AGTAAGTAGGTGCAGGTGCA+TGG	-	tig0018513:182278-182297	Msa1367530:CDS	50.0%
	GCAGAAATTGGGCCAGAAGA+AGG	+	tig0018513:182601-182620	None:intergenic	50.0%
	CTGCTCATCTTCGTGTAGCA+TGG	-	tig0018513:183211-183230	Msa1367530:intron	50.0%
	CTTGAGCAGCTCATGTCTTC+AGG	-	tig0018513:183441-183460	Msa1367530:intron	50.0%
	GTACCAGCAGCAACATGATG+TGG	+	tig0018513:181883-181902	None:intergenic	50.0%
	AGAGAGAGAGAGAGAGAGAG+AGG	+	tig0018513:182029-182048	None:intergenic	50.0%
	AGTAAGTAGGTGCAGGTGCA+TGG	-	tig0018513:182278-182297	Msa1367530:CDS	50.0%
	GCAGAAATTGGGCCAGAAGA+AGG	+	tig0018513:182601-182620	None:intergenic	50.0%
	CTGCTCATCTTCGTGTAGCA+TGG	-	tig0018513:183211-183230	Msa1367530:intron	50.0%
	CTTGAGCAGCTCATGTCTTC+AGG	-	tig0018513:183441-183460	Msa1367530:intron	50.0%
	GAGAGAGAGAGAGAGAGAGG+AGG	+	tig0018513:182028-182047	None:intergenic	55.0%
	GAGAGAGAGAGAGAGAGAGG+AGG	+	tig0018513:182028-182047	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
tig0018513	gene	181532	183945	181532	ID=Msa1367530;Name=Msa1367530
tig0018513	mRNA	181532	183945	181532	ID=Msa1367530-mRNA-1;Parent=Msa1367530;Name=Msa1367530-mRNA-1;_AED=0.07;_eAED=0.07;_QI=140\|1\|1\|1\|0.66\|0.75\|4\|424\|395
tig0018513	exon	181532	182735	181532	ID=Msa1367530-mRNA-1:exon:15630;Parent=Msa1367530-mRNA-1
tig0018513	exon	182832	183004	182832	ID=Msa1367530-mRNA-1:exon:15629;Parent=Msa1367530-mRNA-1
tig0018513	exon	183456	183690	183456	ID=Msa1367530-mRNA-1:exon:15628;Parent=Msa1367530-mRNA-1
tig0018513	exon	183806	183945	183806	ID=Msa1367530-mRNA-1:exon:15627;Parent=Msa1367530-mRNA-1
tig0018513	five_prime_UTR	183806	183945	183806	ID=Msa1367530-mRNA-1:five_prime_utr;Parent=Msa1367530-mRNA-1
tig0018513	CDS	183456	183690	183456	ID=Msa1367530-mRNA-1:cds;Parent=Msa1367530-mRNA-1
tig0018513	CDS	182832	183004	182832	ID=Msa1367530-mRNA-1:cds;Parent=Msa1367530-mRNA-1
tig0018513	CDS	181956	182735	181956	ID=Msa1367530-mRNA-1:cds;Parent=Msa1367530-mRNA-1
tig0018513	three_prime_UTR	181532	181955	181532	ID=Msa1367530-mRNA-1:three_prime_utr;Parent=Msa1367530-mRNA-1

Gene Sequence

>Msa1367530

ATGATGTCTAGTAGCAACGGTAGCTGTGCAAATGCTTCAAATCCTTACCATCAATGCACTCAAGCTTGCTCCCAAAAGACAAAGGGAACCAAACCACATCATGTTGCTGCTGGTACTGCAAGTAATAGCAATAATAGAAAGGTTATTAATGGAGGTGAAAGACGTACTTATGCTTCTTCTTGTCCTAAATCATCCAATCCTTATCATAAGTGTGATGCCAATTGCAACAATTCAGGTGCCACTCCTCATTCCAAGATTGATCATAGGAAGAAGGTGGGTTCTAAGCCACAACCTCCTGTTCTTCAAAGTGTTCCACCAACAAAACCACATTATTCTCATAACAAAAACGATGAGATCATTCCTTCTTCTGGCCCAATTTCTGCTCAATTACACATCCCAGATGTTATGCAGCCTAAAGATCAAGTTAAGGATGGTGCTACTGAGGTCCTCCCCAATAAAACTGAAACAAAGAAAGAGGACAAAGTCGCTGCTTCTCATGAAATCGTTCCAGTAACCAATTCTGATGAAACTGGTGAAGGTGGTTCCAAAGATTTTAGTTTCTCTGGCAATCCCCTTCCTCTCCACAACAAAGAAATAGATACTAGTAGCGAAGGAGAAGCAGATAGTGTCAGTGTTGTATCTGAATCCCGTGTTTCAATTGGAAAATACAATGTCAAAGAAAGTTTTGGTTCCATCCTACAAACAATACTTGACAAGTATGGTGATATAGGGGCAAGCTGTGATTTGGAATCAGTTGTAATGAGGTCATATTACATGGAGTGTGTATGCTTTGTGGTCCAAGAATTACAATCTTCTTCCGATTCAATAAGTAAGACCAAAGTGAGTGAATTGTTGGATATTGTTAAGGATGTTGAATCTGCTCATCTTCGTGTAGCATGGTTGCGTAACACACTCGATGAAATTGTTGAAAATATTGAATTGATTAGTCACCATCAGGATATGGAAATGGAAAAGGCTAACTATGATCGTGAAATGGAATCATTGAGAGAACAGCTAGAATCAGAGTTGGAAACATTGGCTCAGAAAGAACAAGAGGTTGCTGATATTAATATCCGAATTCCTGAAATCAGAGATCGTTTGAGCGAGCTTGAGCAGCTCATGTCTTCAGGATTAGTAGATGATCAAACCACGCTACCTATCAAGTCAAAGATAGATCAACTATTATAA

Protein sequence

>Msa1367530

MMSSSNGSCANASNPYHQCTQACSQKTKGTKPHHVAAGTASNSNNRKVINGGERRTYASSCPKSSNPYHKCDANCNNSGATPHSKIDHRKKVGSKPQPPVLQSVPPTKPHYSHNKNDEIIPSSGPISAQLHIPDVMQPKDQVKDGATEVLPNKTETKKEDKVAASHEIVPVTNSDETGEGGSKDFSFSGNPLPLHNKEIDTSSEGEADSVSVVSESRVSIGKYNVKESFGSILQTILDKYGDIGASCDLESVVMRSYYMECVCFVVQELQSSSDSISKTKVSELLDIVKDVESAHLRVAWLRNTLDEIVENIELISHHQDMEMEKANYDREMESLREQLESELETLAQKEQEVADINIRIPEIRDRLSELEQLMSSGLVDDQTTLPIKSKIDQLL*