Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377840 | XP_013461490.1 | 94.834 | 871 | 44 | 1 | 17 | 886 | 1 | 871 | 0.0 | 1687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377840 | sp|Q9FHK4|EDR4_ARATH | 49.398 | 83 | 42 | 0 | 655 | 737 | 470 | 552 | 3.64e-20 | 99.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377840 | A0A072VBG6 | 94.834 | 871 | 44 | 1 | 17 | 886 | 1 | 871 | 0.0 | 1687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0377840 | 0.860686 | 1.737726e-63 | -8.615850e-47 |
| Msa0011050 | Msa0377840 | 0.808608 | 2.848369e-50 | -8.615850e-47 |
| Msa0013280 | Msa0377840 | 0.857109 | 2.041875e-62 | -8.615850e-47 |
| Msa0048390 | Msa0377840 | 0.804844 | 1.777072e-49 | -8.615850e-47 |
| Msa0062180 | Msa0377840 | 0.830886 | 2.280492e-55 | -8.615850e-47 |
| Msa0064140 | Msa0377840 | 0.828516 | 8.607609e-55 | -8.615850e-47 |
| Msa0086560 | Msa0377840 | 0.803018 | 4.259410e-49 | -8.615850e-47 |
| Msa0106530 | Msa0377840 | 0.878176 | 3.471440e-69 | -8.615850e-47 |
| Msa0119440 | Msa0377840 | 0.805706 | 1.172677e-49 | -8.615850e-47 |
| Msa0136630 | Msa0377840 | 0.810302 | 1.233311e-50 | -8.615850e-47 |
| Msa0151220 | Msa0377840 | 0.818887 | 1.550208e-52 | -8.615850e-47 |
| Msa0155210 | Msa0377840 | 0.811892 | 5.577110e-51 | -8.615850e-47 |
| Msa0162690 | Msa0377840 | 0.825859 | 3.725097e-54 | -8.615850e-47 |
| Msa0187310 | Msa0377840 | 0.821497 | 3.912739e-53 | -8.615850e-47 |
| Msa0201570 | Msa0377840 | 0.830338 | 3.107230e-55 | -8.615850e-47 |
| Msa0224130 | Msa0377840 | 0.806114 | 9.627724e-50 | -8.615850e-47 |
| Msa0364790 | Msa0377840 | 0.824275 | 8.814447e-54 | -8.615850e-47 |
| Msa0372460 | Msa0377840 | 0.801010 | 1.101784e-48 | -8.615850e-47 |
| Msa0377840 | Msa0380600 | 0.815336 | 9.740733e-52 | -8.615850e-47 |
| Msa0377840 | Msa0408340 | 0.837698 | 4.456852e-57 | -8.615850e-47 |
| Msa0377840 | Msa0426560 | 0.975754 | 1.545990e-140 | -8.615850e-47 |
| Msa0377840 | Msa0430240 | 0.810261 | 1.258383e-50 | -8.615850e-47 |
| Msa0377840 | Msa0473140 | 0.976601 | 3.876559e-142 | -8.615850e-47 |
| Msa0377840 | Msa0501410 | 0.831677 | 1.457485e-55 | -8.615850e-47 |
| Msa0377840 | Msa0517610 | 0.976172 | 2.552360e-141 | -8.615850e-47 |
| Msa0377840 | Msa0524330 | 0.845184 | 4.756671e-59 | -8.615850e-47 |
| Msa0377840 | Msa0524440 | 0.867874 | 9.916709e-66 | -8.615850e-47 |
| Msa0377840 | Msa0542530 | 0.801077 | 1.067556e-48 | -8.615850e-47 |
| Msa0377840 | Msa0558390 | 0.817230 | 3.672791e-52 | -8.615850e-47 |
| Msa0377840 | Msa0572560 | 0.825629 | 4.222838e-54 | -8.615850e-47 |
| Msa0377840 | Msa0574600 | 0.812956 | 3.265241e-51 | -8.615850e-47 |
| Msa0377840 | Msa0580920 | 0.814991 | 1.161999e-51 | -8.615850e-47 |
| Msa0377840 | Msa0588710 | 0.808202 | 3.477325e-50 | -8.615850e-47 |
| Msa0377840 | Msa0662580 | 0.805601 | 1.233973e-49 | -8.615850e-47 |
| Msa0377840 | Msa0696100 | 0.800491 | 1.405807e-48 | -8.615850e-47 |
| Msa0377840 | Msa0697570 | 0.822162 | 2.744722e-53 | -8.615850e-47 |
| Msa0377840 | Msa0697590 | 0.802307 | 5.970134e-49 | -8.615850e-47 |
| Msa0377840 | Msa0708310 | 0.812499 | 4.111529e-51 | -8.615850e-47 |
| Msa0377840 | Msa0860250 | 0.821619 | 3.667080e-53 | -8.615850e-47 |
| Msa0377840 | Msa0968050 | 0.836365 | 9.764596e-57 | -8.615850e-47 |
| Msa0377840 | Msa0982780 | 0.804618 | 1.981312e-49 | -8.615850e-47 |
| Msa0377840 | Msa1043120 | 0.852895 | 3.418573e-61 | -8.615850e-47 |
| Msa0377840 | Msa1089190 | 0.808662 | 2.773942e-50 | -8.615850e-47 |
| Msa0377840 | Msa1109670 | 0.809399 | 1.928997e-50 | -8.615850e-47 |
| Msa0377840 | Msa1214170 | 0.823941 | 1.056216e-53 | -8.615850e-47 |
| Msa0377840 | Msa1238690 | 0.811859 | 5.671667e-51 | -8.615850e-47 |
| Msa0377840 | Msa1259860 | 0.800645 | 1.307958e-48 | -8.615850e-47 |
| Msa0377840 | Msa1260680 | 0.832173 | 1.099237e-55 | -8.615850e-47 |
| Msa0377840 | Msa1280150 | 0.820203 | 7.765761e-53 | -8.615850e-47 |
| Msa0377840 | Msa1285200 | 0.810129 | 1.344121e-50 | -8.615850e-47 |
| Msa0377840 | Msa1353890 | 0.820234 | 7.639738e-53 | -8.615850e-47 |
| Msa0377840 | Msa1360020 | 0.822830 | 1.920287e-53 | -8.615850e-47 |
| Msa0377840 | Msa1363810 | 0.809270 | 2.055794e-50 | -8.615850e-47 |
| Msa0377840 | Msa1364080 | 0.810022 | 1.417290e-50 | -8.615850e-47 |
| Msa0377840 | Msa1367530 | 0.869054 | 4.125822e-66 | -8.615850e-47 |
| Msa0377840 | Msa1379580 | 0.819970 | 8.781240e-53 | -8.615850e-47 |
| Msa0377840 | Msa1398900 | 0.806151 | 9.455718e-50 | -8.615850e-47 |
| Msa0377840 | Msa1405820 | 0.855565 | 5.793258e-62 | -8.615850e-47 |
| Msa0377840 | Msa1408180 | 0.825596 | 4.299599e-54 | -8.615850e-47 |
| Msa0377840 | Msa1420930 | 0.806893 | 6.592642e-50 | -8.615850e-47 |
| Msa0377840 | Msa1424580 | 0.839326 | 1.693784e-57 | -8.615850e-47 |
| Msa0377840 | Msa1424630 | 0.829387 | 5.295461e-55 | -8.615850e-47 |
| Msa0377840 | Msa1430550 | 0.812016 | 5.240581e-51 | -8.615850e-47 |
| Msa0377840 | Msa1448980 | 0.825434 | 4.697357e-54 | -8.615850e-47 |
| Msa0259440 | Msa0377840 | 0.807504 | 4.893743e-50 | -8.615850e-47 |
| Msa0260530 | Msa0377840 | 0.811408 | 7.107505e-51 | -8.615850e-47 |
| Msa0265270 | Msa0377840 | 0.803756 | 2.994951e-49 | -8.615850e-47 |
| Msa0277410 | Msa0377840 | 0.836088 | 1.148667e-56 | -8.615850e-47 |
| Msa0282720 | Msa0377840 | 0.815097 | 1.100730e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377840 | MtrunA17_Chr3g0128631 | 94.834 | 871 | 44 | 1 | 17 | 886 | 1 | 871 | 0.0 | 1687 |
| Msa0377840 | MtrunA17_Chr7g0268371 | 58.333 | 144 | 51 | 4 | 474 | 609 | 4 | 146 | 3.85e-40 | 145 |
| Msa0377840 | MtrunA17_Chr5g0428461 | 52.128 | 94 | 43 | 2 | 17 | 108 | 1 | 94 | 3.14e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0377840 | AT5G05190.1 | 49.398 | 83 | 42 | 0 | 655 | 737 | 470 | 552 | 3.70e-21 | 99.4 |
| Msa0377840 | AT3G56410.3 | 45.714 | 70 | 38 | 0 | 661 | 730 | 223 | 292 | 8.84e-13 | 73.2 |
| Msa0377840 | AT3G56410.1 | 45.714 | 70 | 38 | 0 | 661 | 730 | 312 | 381 | 9.06e-13 | 73.2 |
| Msa0377840 | AT3G56410.2 | 45.714 | 70 | 38 | 0 | 661 | 730 | 359 | 428 | 1.01e-12 | 73.2 |
Find 209 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCATATTATGATGATTA+TGG | 0.138733 | 3_1:-78499009 | Msa0377840:CDS |
| GCAGATGCGGTGTTGATTTC+TGG | 0.149630 | 3_1:-78500656 | Msa0377840:CDS |
| GAAATCACTGAAACTAATTT+TGG | 0.164374 | 3_1:-78500698 | Msa0377840:CDS |
| TGTAACTGGCTTCTCTTTAT+TGG | 0.169718 | 3_1:+78500616 | None:intergenic |
| ACATTTAACTATCCGAATTT+TGG | 0.174552 | 3_1:+78501712 | None:intergenic |
| TCACAGTGAGTGATGTTATT+TGG | 0.210386 | 3_1:+78500845 | None:intergenic |
| TCAAAGTTTAATGGTGTTCT+TGG | 0.238441 | 3_1:-78500218 | Msa0377840:CDS |
| GTTTCAGTGATTTCCATTTC+AGG | 0.261394 | 3_1:+78500707 | None:intergenic |
| GATCATAGTTCAAAGTTTAA+TGG | 0.262570 | 3_1:-78500227 | Msa0377840:CDS |
| GGAAGAAGTTGCCGGCATTT+AGG | 0.282712 | 3_1:+78501689 | None:intergenic |
| AATCCTGAAGTGGAAATTAT+TGG | 0.286338 | 3_1:-78500584 | Msa0377840:CDS |
| TCAAGAGAGTGTTATTTAGA+TGG | 0.287618 | 3_1:-78500992 | Msa0377840:CDS |
| GGATTTGCACCTTCTGTAAC+TGG | 0.294631 | 3_1:+78500602 | None:intergenic |
| GAACAAATTAAGTCCTCTTT+TGG | 0.307285 | 3_1:+78500779 | None:intergenic |
| TTCCAGTAATTTCCCCTTCA+AGG | 0.315354 | 3_1:+78500447 | None:intergenic |
| TTTCCAATAATTTCCACTTC+AGG | 0.322328 | 3_1:+78500581 | None:intergenic |
| TGCCTTCTGAGTGACAATTT+AGG | 0.324245 | 3_1:+78500890 | None:intergenic |
| TTTCATATTATGATGATTAT+GGG | 0.327417 | 3_1:-78499008 | Msa0377840:CDS |
| TGGAGCTGATTTATCACTAT+TGG | 0.334684 | 3_1:+78500481 | None:intergenic |
| TACAGCTAAGAAACAAAGTT+TGG | 0.337502 | 3_1:-78501161 | Msa0377840:intron |
| ATTATTGGAAATGATTTAGA+AGG | 0.342099 | 3_1:-78500569 | Msa0377840:CDS |
| ATTGAGGAGATAAGTAATAA+TGG | 0.344048 | 3_1:-78500821 | Msa0377840:CDS |
| ATAGCTGATTGGTCATTGTT+AGG | 0.346593 | 3_1:+78500347 | None:intergenic |
| TGCATTGATTTCTTGCATAC+TGG | 0.352905 | 3_1:+78501123 | None:intergenic |
| TGTTGTGTCCACTTCAGATT+TGG | 0.354447 | 3_1:+78500316 | None:intergenic |
| CTTGTTGCTTCAGCTGAATA+AGG | 0.358091 | 3_1:+78499558 | None:intergenic |
| AAAGGGTCTTAGAACTTAGA+AGG | 0.359678 | 3_1:+78502352 | None:intergenic |
| AGCTCCTCGTATGGGGATCT+TGG | 0.360440 | 3_1:-78500080 | Msa0377840:CDS |
| GTTGAGCTAGGAGAGACATT+TGG | 0.361833 | 3_1:+78498895 | None:intergenic |
| TCATCATGCACTCCATTTGA+TGG | 0.364226 | 3_1:+78499879 | None:intergenic |
| GGGAGAGAAAATAGAGGAAA+TGG | 0.365714 | 3_1:+78502397 | None:intergenic |
| AACCTTGAAGGGGAAATTAC+TGG | 0.369393 | 3_1:-78500449 | Msa0377840:CDS |
| TTGAGCTAGGAGAGACATTT+GGG | 0.377528 | 3_1:+78498896 | None:intergenic |
| TTCATTACAAAGACCAAAAG+AGG | 0.384209 | 3_1:-78500792 | Msa0377840:CDS |
| ATAATCATCATAATATGAAA+TGG | 0.389072 | 3_1:+78499011 | None:intergenic |
| CAGGAAATTGTCAGCAGAAA+AGG | 0.389892 | 3_1:-78498773 | Msa0377840:CDS |
| GGAAAGAATAAAGAATGAAA+AGG | 0.393679 | 3_1:+78502334 | None:intergenic |
| CCTTCAAGGTTCGTACCAAC+TGG | 0.397424 | 3_1:+78500461 | None:intergenic |
| TTTCCTGGTTTCAGACATAC+TGG | 0.398983 | 3_1:+78498789 | None:intergenic |
| CTGTGGTGAGGAAATACTTA+AGG | 0.400170 | 3_1:-78499353 | Msa0377840:CDS |
| GATAGGGGACAGACCTGAAA+TGG | 0.402925 | 3_1:-78500720 | Msa0377840:CDS |
| TATGACAAATCAGCTCTGAT+AGG | 0.403629 | 3_1:-78500737 | Msa0377840:CDS |
| CTCTCCTAGCTCAACATTCA+AGG | 0.405053 | 3_1:-78498887 | Msa0377840:CDS |
| GCCCCTCTTATCACTTTACT+TGG | 0.409919 | 3_1:+78498697 | None:intergenic |
| CTGTGCTGTCTTTCATGACA+TGG | 0.414712 | 3_1:+78500021 | None:intergenic |
| TCCAACATGAAGATTTATAC+AGG | 0.415572 | 3_1:-78499458 | Msa0377840:CDS |
| AACATATTTACCACCATTCA+AGG | 0.420023 | 3_1:+78498921 | None:intergenic |
| GAATTTATTTATACCTTGGT+TGG | 0.421350 | 3_1:+78502237 | None:intergenic |
| GTTCACAGACGAAGAAGAAC+TGG | 0.424525 | 3_1:-78500930 | Msa0377840:CDS |
| TTAATTGAAGATCATAAAAG+TGG | 0.425574 | 3_1:+78502308 | None:intergenic |
| ACAGAATATCCTTGAGGCTC+TGG | 0.425857 | 3_1:+78501668 | None:intergenic |
| ATTTGTTCATCTGATGAAGA+TGG | 0.427120 | 3_1:-78500764 | Msa0377840:CDS |
| GTAAGGTGGTTACCAAAATT+CGG | 0.427969 | 3_1:-78501724 | Msa0377840:CDS |
| TCTTCGTCTGTGAACTTGAA+TGG | 0.431704 | 3_1:+78500938 | None:intergenic |
| CAAGAAATCAATGCAGCTCC+TGG | 0.432286 | 3_1:-78501115 | Msa0377840:CDS |
| CCTTTCTCATCGAATACTAT+AGG | 0.433792 | 3_1:-78499135 | Msa0377840:CDS |
| GAGTGTTATTTAGATGGAAA+TGG | 0.434349 | 3_1:-78500986 | Msa0377840:CDS |
| TCGAGAATGCCTTACAGATC+AGG | 0.435054 | 3_1:-78499918 | Msa0377840:CDS |
| TCCGCGAGTACTTATGCCTT+TGG | 0.441596 | 3_1:+78499583 | None:intergenic |
| GGAGTAGAAGACTTGAATAA+TGG | 0.442556 | 3_1:-78500548 | Msa0377840:CDS |
| GAAAGAATAAAGAATGAAAA+GGG | 0.445133 | 3_1:+78502335 | None:intergenic |
| CCAGTTGGTACGAACCTTGA+AGG | 0.447258 | 3_1:-78500461 | Msa0377840:CDS |
| CTTAAGGGACAAACATAACT+TGG | 0.447454 | 3_1:-78499337 | Msa0377840:CDS |
| TCCTCGGAAAGATAGTTTGA+AGG | 0.454231 | 3_1:-78501032 | Msa0377840:CDS |
| GAAGGTCATGGCTATGGTAT+TGG | 0.459591 | 3_1:+78499679 | None:intergenic |
| CACTAACCACCTCGCTTCTA+CGG | 0.460505 | 3_1:+78499091 | None:intergenic |
| CGTAGAAGCGAGGTGGTTAG+TGG | 0.462545 | 3_1:-78499090 | Msa0377840:CDS |
| CAATGACCAATCAGCTATAG+AGG | 0.463430 | 3_1:-78500342 | Msa0377840:CDS |
| TATATTTGAAGGAATATGTC+TGG | 0.464306 | 3_1:-78501746 | Msa0377840:intron |
| GAGGTAAAGCCTCCACAAAA+AGG | 0.465708 | 3_1:-78498751 | Msa0377840:CDS |
| ACGGATACAGATGAATCAAC+TGG | 0.473634 | 3_1:-78498820 | Msa0377840:CDS |
| CAACAAATTCATCCCTTGAA+TGG | 0.475924 | 3_1:-78498934 | Msa0377840:CDS |
| ATATGAGCTTCTTGTGGTTG+AGG | 0.478521 | 3_1:+78500175 | None:intergenic |
| TGGTATCCTCTATAGCTGAT+TGG | 0.481238 | 3_1:+78500336 | None:intergenic |
| ACACCAAGTAAAGTGATAAG+AGG | 0.482329 | 3_1:-78498700 | Msa0377840:CDS |
| TTGCTAATAGCTCCTCGTAT+GGG | 0.484351 | 3_1:-78500088 | Msa0377840:CDS |
| ATGACAAATCAGCTCTGATA+GGG | 0.484835 | 3_1:-78500736 | Msa0377840:CDS |
| CTTTCATAGCCTGATCTGTA+AGG | 0.485476 | 3_1:+78499909 | None:intergenic |
| TAATCATCATAATATGAAAT+GGG | 0.485762 | 3_1:+78499012 | None:intergenic |
| TGTGGTGAGGAAATACTTAA+GGG | 0.486354 | 3_1:-78499352 | Msa0377840:CDS |
| GTTATTTGGACCACCTTTGT+TGG | 0.486422 | 3_1:+78500859 | None:intergenic |
| GTGTGCAAAATCTCATGAAA+TGG | 0.488875 | 3_1:+78502279 | None:intergenic |
| CATCACTCACTGTGAGATTG+AGG | 0.490880 | 3_1:-78500837 | Msa0377840:CDS |
| TTCTGCTGGTGTATCTTACA+AGG | 0.491674 | 3_1:-78499721 | Msa0377840:CDS |
| GCTGAAGGAATGACCAGAAA+AGG | 0.496200 | 3_1:-78500119 | Msa0377840:CDS |
| AGAAGAACTGGAAAGTGAGT+TGG | 0.497447 | 3_1:-78500918 | Msa0377840:CDS |
| AGGTACTCTTCATAAACTCA+TGG | 0.498632 | 3_1:-78498731 | Msa0377840:CDS |
| TTTGTTGTGTAAGAGAAAGA+AGG | 0.499054 | 3_1:+78498950 | None:intergenic |
| TAAGAGGGGCATCTTGTTGA+AGG | 0.499268 | 3_1:-78498684 | None:intergenic |
| GAAAGTGGCAGGCCATCAAA+TGG | 0.507500 | 3_1:-78499891 | Msa0377840:CDS |
| TATTTATACCTTGGTTGGAT+CGG | 0.507670 | 3_1:+78502242 | None:intergenic |
| GTGTACAAGTGTGGTGGATG+TGG | 0.512363 | 3_1:-78501647 | Msa0377840:CDS |
| GCATATTGATAGAAAACGTC+AGG | 0.513186 | 3_1:-78501059 | Msa0377840:CDS |
| AAGGAATATGTCTGGTAAGG+TGG | 0.515393 | 3_1:-78501738 | Msa0377840:CDS |
| CGACATCACAAGCCAGTGGC+AGG | 0.515436 | 3_1:-78499309 | Msa0377840:CDS |
| CTTGATCACTCTAGATGTAT+CGG | 0.516311 | 3_1:-78499633 | Msa0377840:CDS |
| GCCATGACCTTCATGAGGGA+AGG | 0.519968 | 3_1:-78499668 | Msa0377840:CDS |
| TCCTCTCCTTCTCCCTCTTG+TGG | 0.520199 | 3_1:+78500386 | None:intergenic |
| AATCTGCAGGTAGCTGAAGC+AGG | 0.520263 | 3_1:+78499250 | None:intergenic |
| CGAGTACTTATGCCTTTGGC+GGG | 0.521127 | 3_1:+78499587 | None:intergenic |
| AAGAGAGGGAGAGAAAATAG+AGG | 0.521921 | 3_1:+78502391 | None:intergenic |
| GAGGCTCTGGAAGAAGTTGC+CGG | 0.525192 | 3_1:+78501681 | None:intergenic |
| ACCTGTATAAATCTTCATGT+TGG | 0.526192 | 3_1:+78499457 | None:intergenic |
| GTTGATTCATCTGTATCCGT+TGG | 0.526902 | 3_1:+78498823 | None:intergenic |
| TGTTATGTTATAATGAAGAG+AGG | 0.529132 | 3_1:+78502376 | None:intergenic |
| TCTGGTCATTCCTTCAGCAA+CGG | 0.529453 | 3_1:+78500124 | None:intergenic |
| ATTACTGGAAACAATATAGC+AGG | 0.531297 | 3_1:-78500434 | Msa0377840:CDS |
| GGATGTGGCACTGACCTTCA+AGG | 0.532393 | 3_1:-78501632 | Msa0377840:intron |
| TTTGGAAACTTGTCGCTAGA+GGG | 0.532723 | 3_1:-78500680 | Msa0377840:CDS |
| AAAGGAGCTCCACCTGCCAC+TGG | 0.533821 | 3_1:+78499297 | None:intergenic |
| CCTCATGAAGGTCATGGCTA+TGG | 0.534051 | 3_1:+78499673 | None:intergenic |
| TTTGCCTTGAATGTTGAGCT+AGG | 0.534758 | 3_1:+78498883 | None:intergenic |
| TAGTTAAATGTCCTAAATGC+CGG | 0.534878 | 3_1:-78501700 | Msa0377840:CDS |
| TAATGCAATCGCGGCTCCAA+CGG | 0.535239 | 3_1:-78498839 | Msa0377840:CDS |
| CCTATAGTATTCGATGAGAA+AGG | 0.535878 | 3_1:+78499135 | None:intergenic |
| TTGAAGGAATATGTCTGGTA+AGG | 0.536667 | 3_1:-78501741 | Msa0377840:intron |
| CATTTATGACAAGTGACAAA+AGG | 0.537261 | 3_1:+78499279 | None:intergenic |
| CCTCCAGTATGTCTGAAACC+AGG | 0.539270 | 3_1:-78498792 | Msa0377840:CDS |
| CAGTTGGTACGAACCTTGAA+GGG | 0.541921 | 3_1:-78500460 | Msa0377840:CDS |
| CACCAAGTAAAGTGATAAGA+GGG | 0.542812 | 3_1:-78498699 | Msa0377840:CDS |
| ATACCTTGGTTGGATCGGAT+TGG | 0.544025 | 3_1:+78502247 | None:intergenic |
| AAATGCAAGCAATGAGATTG+TGG | 0.546365 | 3_1:-78500276 | Msa0377840:CDS |
| GATCAGGCTATGAAAGTGGC+AGG | 0.549263 | 3_1:-78499902 | Msa0377840:CDS |
| CTCGCGTGAGGACACTGACC+AGG | 0.551465 | 3_1:-78499832 | Msa0377840:CDS |
| GCGAGTACTTATGCCTTTGG+CGG | 0.552548 | 3_1:+78499586 | None:intergenic |
| TGCTAATAGCTCCTCGTATG+GGG | 0.553250 | 3_1:-78500087 | Msa0377840:CDS |
| CTTGCTAATAGCTCCTCGTA+TGG | 0.554567 | 3_1:-78500089 | Msa0377840:CDS |
| TGTATCGGAAGATGTAATCA+TGG | 0.555125 | 3_1:-78499618 | Msa0377840:CDS |
| TGGATCGGATTGGTAGTTGA+AGG | 0.556537 | 3_1:+78502257 | None:intergenic |
| GAGAAAACCTTCCCTCATGA+AGG | 0.564438 | 3_1:+78499661 | None:intergenic |
| ATCAAATGGAGTGCATGATG+AGG | 0.568884 | 3_1:-78499877 | Msa0377840:CDS |
| GAGAAAATAGAGGAAATGGT+AGG | 0.569899 | 3_1:+78502401 | None:intergenic |
| ATGGAATTGCGTCCCGCCAA+AGG | 0.570672 | 3_1:-78499599 | Msa0377840:CDS |
| TAATGGCAATTTGCCACTAG+AGG | 0.571741 | 3_1:-78500531 | Msa0377840:CDS |
| CTGCTGGTGTATCTTACAAG+GGG | 0.572567 | 3_1:-78499719 | Msa0377840:CDS |
| TACAGATCAGGCTATGAAAG+TGG | 0.576466 | 3_1:-78499906 | Msa0377840:CDS |
| TGCAGCTCCTGGAAAAGCAT+CGG | 0.577154 | 3_1:-78501104 | Msa0377840:CDS |
| AAAGAGAAGCCAGTTACAGA+AGG | 0.579951 | 3_1:-78500611 | Msa0377840:CDS |
| GCCACAAGAGGGAGAAGGAG+AGG | 0.582814 | 3_1:-78500387 | Msa0377840:CDS |
| ACAAATGGAAGAGTTTCTGC+TGG | 0.583470 | 3_1:-78499735 | Msa0377840:CDS |
| AGAGGATACCAAATCTGAAG+TGG | 0.584314 | 3_1:-78500324 | Msa0377840:CDS |
| CATCACAAGCCAGTGGCAGG+TGG | 0.586203 | 3_1:-78499306 | Msa0377840:CDS |
| GTTATGTTATAATGAAGAGA+GGG | 0.586218 | 3_1:+78502377 | None:intergenic |
| ACATATTTACCACCATTCAA+GGG | 0.586967 | 3_1:+78498922 | None:intergenic |
| ACCTTCCCTCATGAAGGTCA+TGG | 0.587046 | 3_1:+78499667 | None:intergenic |
| GGTATTGGTATGCAGAACTA+CGG | 0.587389 | 3_1:+78499694 | None:intergenic |
| ACTATGATCTCTTAATTCTG+TGG | 0.588099 | 3_1:+78500241 | None:intergenic |
| GGTACTCTTCATAAACTCAT+GGG | 0.590389 | 3_1:-78498730 | Msa0377840:CDS |
| TTATAAAGGAGAAAATCTGC+AGG | 0.591353 | 3_1:+78499237 | None:intergenic |
| GCCTTCAAACTATCTTTCCG+AGG | 0.593288 | 3_1:+78501031 | None:intergenic |
| GTCGCTAGAGGGAGCAGATG+CGG | 0.597570 | 3_1:-78500669 | Msa0377840:CDS |
| AATGCTTACACCGTTGCTGA+AGG | 0.598914 | 3_1:-78500134 | Msa0377840:CDS |
| TAATGGAAAATGGCCACAAG+AGG | 0.599730 | 3_1:-78500399 | Msa0377840:CDS |
| AAGGGTCTTAGAACTTAGAA+GGG | 0.601574 | 3_1:+78502353 | None:intergenic |
| TACCTAAATTGTCACTCAGA+AGG | 0.601587 | 3_1:-78500892 | Msa0377840:CDS |
| GGAATGACCAGAAAAGGTAA+AGG | 0.602415 | 3_1:-78500113 | Msa0377840:CDS |
| AGAAGGTGCAAATCCTGAAG+TGG | 0.603285 | 3_1:-78500594 | Msa0377840:CDS |
| TCTGCTGGTGTATCTTACAA+GGG | 0.604895 | 3_1:-78499720 | Msa0377840:CDS |
| CTACGGTGAAGCTCACGAGA+TGG | 0.605302 | 3_1:+78499108 | None:intergenic |
| TCAAATGGAGTGCATGATGA+GGG | 0.605561 | 3_1:-78499876 | Msa0377840:CDS |
| TATATGAGTGAGGAAACAAA+TGG | 0.606561 | 3_1:-78499750 | Msa0377840:CDS |
| CAAATTCATCCCTTGAATGG+TGG | 0.607888 | 3_1:-78498931 | Msa0377840:CDS |
| GATCTGTAAGGCATTCTCGA+TGG | 0.608638 | 3_1:+78499921 | None:intergenic |
| GAAAACGTCAGGTTCTTCCT+CGG | 0.608765 | 3_1:-78501048 | Msa0377840:CDS |
| CTAAGACACGGGAACAACAA+TGG | 0.613621 | 3_1:+78499505 | None:intergenic |
| CACAACATGGTAATTCACGT+TGG | 0.615905 | 3_1:-78499971 | Msa0377840:CDS |
| ACAAGAAGCTCATATATCAC+AGG | 0.619189 | 3_1:-78500167 | Msa0377840:CDS |
| TCTTTCACACGACTCGCGTG+AGG | 0.622099 | 3_1:-78499844 | Msa0377840:CDS |
| GAAATTGTCAGCAGAAAAGG+AGG | 0.624190 | 3_1:-78498770 | Msa0377840:CDS |
| TGTGATATATGAGCTTCTTG+TGG | 0.626127 | 3_1:+78500169 | None:intergenic |
| AAATGGCCACAAGAGGGAGA+AGG | 0.626477 | 3_1:-78500392 | Msa0377840:CDS |
| CCAGAATTAAAATCCTCTAG+TGG | 0.627898 | 3_1:+78500518 | None:intergenic |
| GGCATAGGGCTACTGTGGTG+AGG | 0.627962 | 3_1:-78499365 | Msa0377840:CDS |
| AGAAGAATCTGCTAAGACAC+GGG | 0.628845 | 3_1:+78499494 | None:intergenic |
| AATGGAAAATGGCCACAAGA+GGG | 0.631353 | 3_1:-78500398 | Msa0377840:CDS |
| GTATGTCACAAGCTGAAATG+TGG | 0.632938 | 3_1:-78499210 | Msa0377840:CDS |
| CATAGAGTGTCCAACAAAGG+TGG | 0.635172 | 3_1:-78500869 | Msa0377840:CDS |
| TCTGTTTCACTGAAGCATTG+TGG | 0.635814 | 3_1:+78499402 | None:intergenic |
| GAGAAGAATCTGCTAAGACA+CGG | 0.636353 | 3_1:+78499493 | None:intergenic |
| TCAGAGGCATAGGGCTACTG+TGG | 0.638205 | 3_1:-78499370 | Msa0377840:CDS |
| TGAAGATCATAAAAGTGGAG+AGG | 0.638333 | 3_1:+78502313 | None:intergenic |
| TGACAAATCAGCTCTGATAG+GGG | 0.640991 | 3_1:-78500735 | Msa0377840:CDS |
| GAAATGTGGTAAATGTTCAG+AGG | 0.642119 | 3_1:-78499196 | Msa0377840:CDS |
| TCTGAAGTGGACACAACAGA+AGG | 0.642126 | 3_1:-78500311 | Msa0377840:CDS |
| GATGGAAATGGTGAGTACAA+TGG | 0.642186 | 3_1:-78500974 | Msa0377840:CDS |
| CAACTTCTTCCAGAGCCTCA+AGG | 0.642945 | 3_1:-78501677 | Msa0377840:CDS |
| CCTGGTTTCAGACATACTGG+AGG | 0.645462 | 3_1:+78498792 | None:intergenic |
| CCATAGCCATGACCTTCATG+AGG | 0.648193 | 3_1:-78499673 | Msa0377840:CDS |
| AGTGATAAATCAGCTCCAGT+TGG | 0.651091 | 3_1:-78500476 | Msa0377840:CDS |
| AGGCATAGAGTGTCCAACAA+AGG | 0.653537 | 3_1:-78500872 | Msa0377840:CDS |
| CAAGACTCGCTATATGAGTG+AGG | 0.657867 | 3_1:-78499760 | Msa0377840:CDS |
| CATAGCCATGACCTTCATGA+GGG | 0.658552 | 3_1:-78499672 | Msa0377840:CDS |
| TATTCTGTGTACAAGTGTGG+TGG | 0.659670 | 3_1:-78501653 | Msa0377840:CDS |
| GGTAACAAGAATGATCTACA+TGG | 0.670834 | 3_1:+78499526 | None:intergenic |
| TGAGCTTCACCGTAGAAGCG+AGG | 0.674280 | 3_1:-78499100 | Msa0377840:CDS |
| AGTTGGTACGAACCTTGAAG+GGG | 0.674859 | 3_1:-78500459 | Msa0377840:CDS |
| GCCAAAGGCATAAGTACTCG+CGG | 0.688085 | 3_1:-78499584 | Msa0377840:CDS |
| TGTTCCAAGATCCCCATACG+AGG | 0.688484 | 3_1:+78500076 | None:intergenic |
| CATACGAGGAGCTATTAGCA+AGG | 0.689093 | 3_1:+78500090 | None:intergenic |
| ACCAAGTAAAGTGATAAGAG+GGG | 0.689921 | 3_1:-78498698 | Msa0377840:CDS |
| GGATATTCTGTGTACAAGTG+TGG | 0.693148 | 3_1:-78501656 | Msa0377840:CDS |
| TAGTTGACATGAGATACTGA+TGG | 0.696878 | 3_1:+78499057 | None:intergenic |
| CTACCAATCCGATCCAACCA+AGG | 0.699740 | 3_1:-78502250 | Msa0377840:intron |
| GGAAATGGTGAGTACAATGG+CGG | 0.699790 | 3_1:-78500971 | Msa0377840:CDS |
| GTGTTGGACAATACACAACA+TGG | 0.710351 | 3_1:-78499984 | Msa0377840:CDS |
| TAAGCGACATCACAAGCCAG+TGG | 0.712041 | 3_1:-78499313 | Msa0377840:CDS |
| TTGTACACAGAATATCCTTG+AGG | 0.719345 | 3_1:+78501662 | None:intergenic |
| TCATGTTGGAAATGAACACG+TGG | 0.723896 | 3_1:+78499471 | None:intergenic |
| GCTTCACCGTAGAAGCGAGG+TGG | 0.726929 | 3_1:-78499097 | Msa0377840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTAAATATATATTTGA+AGG | - | chr3_1:78499334-78499353 | Msa0377840:CDS | 10.0% |
| !!! | AAAAATTAAATAATGGAAAA+TGG | - | chr3_1:78500682-78500701 | Msa0377840:CDS | 10.0% |
| !! | AAATGACAAACAAAATTAAA+AGG | + | chr3_1:78498994-78499013 | None:intergenic | 15.0% |
| !! | GAAATTTATATCAATCAAAT+AGG | + | chr3_1:78499710-78499729 | None:intergenic | 15.0% |
| !!! | TTAATATCATTATTTGAAAC+CGG | + | chr3_1:78499844-78499863 | None:intergenic | 15.0% |
| !! | TAATCATCATAATATGAAAT+GGG | + | chr3_1:78502082-78502101 | None:intergenic | 15.0% |
| !! | ATAATCATCATAATATGAAA+TGG | + | chr3_1:78502083-78502102 | None:intergenic | 15.0% |
| !! | ATTTCATATTATGATGATTA+TGG | - | chr3_1:78502082-78502101 | Msa0377840:intron | 15.0% |
| !! | TTTCATATTATGATGATTAT+GGG | - | chr3_1:78502083-78502102 | Msa0377840:intron | 15.0% |
| !! | GAAAGAATAAAGAATGAAAA+GGG | + | chr3_1:78498759-78498778 | None:intergenic | 20.0% |
| !! | TTAATTGAAGATCATAAAAG+TGG | + | chr3_1:78498786-78498805 | None:intergenic | 20.0% |
| !! | AACCAAGGTATAAATAAATT+CGG | - | chr3_1:78498856-78498875 | Msa0377840:CDS | 20.0% |
| !! | TCTTATCATGTTCAAATAAA+AGG | + | chr3_1:78499052-78499071 | None:intergenic | 20.0% |
| !!! | ATCTATAACTTGCAAAATTT+GGG | - | chr3_1:78499285-78499304 | Msa0377840:CDS | 20.0% |
| !! | ATTATTGGAAATGATTTAGA+AGG | - | chr3_1:78500522-78500541 | Msa0377840:CDS | 20.0% |
| ! | GTTATGTTATAATGAAGAGA+GGG | + | chr3_1:78498717-78498736 | None:intergenic | 25.0% |
| ! | TGTTATGTTATAATGAAGAG+AGG | + | chr3_1:78498718-78498737 | None:intergenic | 25.0% |
| ! | GGAAAGAATAAAGAATGAAA+AGG | + | chr3_1:78498760-78498779 | None:intergenic | 25.0% |
| ! | GAATTTATTTATACCTTGGT+TGG | + | chr3_1:78498857-78498876 | None:intergenic | 25.0% |
| ! | ACTAAGTTAATTATGCAAAG+AGG | + | chr3_1:78499162-78499181 | None:intergenic | 25.0% |
| !! | AGTGAAACTGAAAGTATATT+TGG | - | chr3_1:78499225-78499244 | Msa0377840:CDS | 25.0% |
| !! | CATCTATAACTTGCAAAATT+TGG | - | chr3_1:78499284-78499303 | Msa0377840:CDS | 25.0% |
| !! | TCTATAACTTGCAAAATTTG+GGG | - | chr3_1:78499286-78499305 | Msa0377840:CDS | 25.0% |
| ! | TATATTTGAAGGAATATGTC+TGG | - | chr3_1:78499345-78499364 | Msa0377840:CDS | 25.0% |
| !! | ACATTTAACTATCCGAATTT+TGG | + | chr3_1:78499382-78499401 | None:intergenic | 25.0% |
| !! | AATTAGATTTTTCACCTTGA+AGG | + | chr3_1:78499476-78499495 | None:intergenic | 25.0% |
| !! | AGTAAAATTGAAGAGTACAA+TGG | + | chr3_1:78499512-78499531 | None:intergenic | 25.0% |
| ! | TATAACAGAATACATGACAT+TGG | + | chr3_1:78499672-78499691 | None:intergenic | 25.0% |
| ! | AATTCTCATGTAAATGTTGT+TGG | + | chr3_1:78499782-78499801 | None:intergenic | 25.0% |
| ! | TGAGAATTTCTATGAATATC+CGG | - | chr3_1:78499822-78499841 | Msa0377840:CDS | 25.0% |
| ! | ATTGAGGAGATAAGTAATAA+TGG | - | chr3_1:78500270-78500289 | Msa0377840:CDS | 25.0% |
| !! | GAAATCACTGAAACTAATTT+TGG | - | chr3_1:78500393-78500412 | Msa0377840:CDS | 25.0% |
| ! | GCAGGAGAAAAATTAAATAA+TGG | - | chr3_1:78500675-78500694 | Msa0377840:CDS | 25.0% |
| ! | GATCATAGTTCAAAGTTTAA+TGG | - | chr3_1:78500864-78500883 | Msa0377840:CDS | 25.0% |
| ! | AGTGAATAAAAACAAAGTGT+TGG | - | chr3_1:78501091-78501110 | Msa0377840:CDS | 25.0% |
| ! | AAAAATGAAACTGATGAGAA+TGG | - | chr3_1:78501283-78501302 | Msa0377840:intron | 25.0% |
| !! | TGTGACATACTCTTTTATAA+AGG | + | chr3_1:78501871-78501890 | None:intergenic | 25.0% |
| !!! | AAGATATTTTAATGCAATCG+CGG | - | chr3_1:78502243-78502262 | Msa0377840:intron | 25.0% |
| TATTTATACCTTGGTTGGAT+CGG | + | chr3_1:78498852-78498871 | None:intergenic | 30.0% | |
| TGCCGAATTTATTTATACCT+TGG | + | chr3_1:78498861-78498880 | None:intergenic | 30.0% | |
| AAGGTAAACTAGCTATATAC+TGG | + | chr3_1:78499033-78499052 | None:intergenic | 30.0% | |
| TAGTTAAATGTCCTAAATGC+CGG | - | chr3_1:78499391-78499410 | Msa0377840:CDS | 30.0% | |
| CTCTTGTAATAGTTTGACAT+TGG | - | chr3_1:78499605-78499624 | Msa0377840:CDS | 30.0% | |
| TACAGCTAAGAAACAAAGTT+TGG | - | chr3_1:78499930-78499949 | Msa0377840:CDS | 30.0% | |
| !! | TCAAGAGAGTGTTATTTAGA+TGG | - | chr3_1:78500099-78500118 | Msa0377840:CDS | 30.0% |
| !! | GAGTGTTATTTAGATGGAAA+TGG | - | chr3_1:78500105-78500124 | Msa0377840:CDS | 30.0% |
| TTCATTACAAAGACCAAAAG+AGG | - | chr3_1:78500299-78500318 | Msa0377840:CDS | 30.0% | |
| ! | GAACAAATTAAGTCCTCTTT+TGG | + | chr3_1:78500315-78500334 | None:intergenic | 30.0% |
| ATTTGTTCATCTGATGAAGA+TGG | - | chr3_1:78500327-78500346 | Msa0377840:CDS | 30.0% | |
| AATCCTGAAGTGGAAATTAT+TGG | - | chr3_1:78500507-78500526 | Msa0377840:CDS | 30.0% | |
| TTTCCAATAATTTCCACTTC+AGG | + | chr3_1:78500513-78500532 | None:intergenic | 30.0% | |
| ATTACTGGAAACAATATAGC+AGG | - | chr3_1:78500657-78500676 | Msa0377840:CDS | 30.0% | |
| ACTATGATCTCTTAATTCTG+TGG | + | chr3_1:78500853-78500872 | None:intergenic | 30.0% | |
| TCAAAGTTTAATGGTGTTCT+TGG | - | chr3_1:78500873-78500892 | Msa0377840:CDS | 30.0% | |
| !!! | ATGACATGGTTTTTTTCATG+TGG | + | chr3_1:78501059-78501078 | None:intergenic | 30.0% |
| !!! | TCATCAGTTTCATTTTTTCC+TGG | + | chr3_1:78501280-78501299 | None:intergenic | 30.0% |
| TATATGAGTGAGGAAACAAA+TGG | - | chr3_1:78501341-78501360 | Msa0377840:intron | 30.0% | |
| TCCAACATGAAGATTTATAC+AGG | - | chr3_1:78501633-78501652 | Msa0377840:CDS | 30.0% | |
| ACCTGTATAAATCTTCATGT+TGG | + | chr3_1:78501637-78501656 | None:intergenic | 30.0% | |
| ! | AAACAGATTCTGATTTTCAG+AGG | - | chr3_1:78501705-78501724 | Msa0377840:CDS | 30.0% |
| CATTTATGACAAGTGACAAA+AGG | + | chr3_1:78501815-78501834 | None:intergenic | 30.0% | |
| TTATAAAGGAGAAAATCTGC+AGG | + | chr3_1:78501857-78501876 | None:intergenic | 30.0% | |
| ! | CTCAAGTTTTCATTGAAGAA+TGG | - | chr3_1:78501920-78501939 | Msa0377840:intron | 30.0% |
| !! | TAATATGAAATGGGTTTTGC+AGG | + | chr3_1:78502073-78502092 | None:intergenic | 30.0% |
| ! | TTTGTTGTGTAAGAGAAAGA+AGG | + | chr3_1:78502144-78502163 | None:intergenic | 30.0% |
| ACATATTTACCACCATTCAA+GGG | + | chr3_1:78502172-78502191 | None:intergenic | 30.0% | |
| AACATATTTACCACCATTCA+AGG | + | chr3_1:78502173-78502192 | None:intergenic | 30.0% | |
| !!! | TTATGAAGAGTACCTTTTTG+TGG | + | chr3_1:78502355-78502374 | None:intergenic | 30.0% |
| GAGAAAATAGAGGAAATGGT+AGG | + | chr3_1:78498693-78498712 | None:intergenic | 35.0% | |
| AAGGGTCTTAGAACTTAGAA+GGG | + | chr3_1:78498741-78498760 | None:intergenic | 35.0% | |
| AAAGGGTCTTAGAACTTAGA+AGG | + | chr3_1:78498742-78498761 | None:intergenic | 35.0% | |
| TGAAGATCATAAAAGTGGAG+AGG | + | chr3_1:78498781-78498800 | None:intergenic | 35.0% | |
| GTGTGCAAAATCTCATGAAA+TGG | + | chr3_1:78498815-78498834 | None:intergenic | 35.0% | |
| ATAGTCCAAATGTAGAGTCT+TGG | + | chr3_1:78499312-78499331 | None:intergenic | 35.0% | |
| TTGAAGGAATATGTCTGGTA+AGG | - | chr3_1:78499350-78499369 | Msa0377840:CDS | 35.0% | |
| GTAAGGTGGTTACCAAAATT+CGG | - | chr3_1:78499367-78499386 | Msa0377840:CDS | 35.0% | |
| TTGTACACAGAATATCCTTG+AGG | + | chr3_1:78499432-78499451 | None:intergenic | 35.0% | |
| ACAGAATACATGACATTGGT+TGG | + | chr3_1:78499668-78499687 | None:intergenic | 35.0% | |
| GTAAATGTTGTTGGACAACA+TGG | + | chr3_1:78499773-78499792 | None:intergenic | 35.0% | |
| !! | TGCATTGATTTCTTGCATAC+TGG | + | chr3_1:78499971-78499990 | None:intergenic | 35.0% |
| GCATATTGATAGAAAACGTC+AGG | - | chr3_1:78500032-78500051 | Msa0377840:CDS | 35.0% | |
| TACCTAAATTGTCACTCAGA+AGG | - | chr3_1:78500199-78500218 | Msa0377840:CDS | 35.0% | |
| TCACAGTGAGTGATGTTATT+TGG | + | chr3_1:78500249-78500268 | None:intergenic | 35.0% | |
| ! | TATGACAAATCAGCTCTGAT+AGG | - | chr3_1:78500354-78500373 | Msa0377840:CDS | 35.0% |
| ! | ATGACAAATCAGCTCTGATA+GGG | - | chr3_1:78500355-78500374 | Msa0377840:CDS | 35.0% |
| GTTTCAGTGATTTCCATTTC+AGG | + | chr3_1:78500387-78500406 | None:intergenic | 35.0% | |
| ! | TGTAACTGGCTTCTCTTTAT+TGG | + | chr3_1:78500478-78500497 | None:intergenic | 35.0% |
| GGAGTAGAAGACTTGAATAA+TGG | - | chr3_1:78500543-78500562 | Msa0377840:CDS | 35.0% | |
| CCAGAATTAAAATCCTCTAG+TGG | + | chr3_1:78500576-78500595 | None:intergenic | 35.0% | |
| !!! | CCACTAGAGGATTTTAATTC+TGG | - | chr3_1:78500573-78500592 | Msa0377840:CDS | 35.0% |
| ! | TGGAGCTGATTTATCACTAT+TGG | + | chr3_1:78500613-78500632 | None:intergenic | 35.0% |
| ! | ATAGCTGATTGGTCATTGTT+AGG | + | chr3_1:78500747-78500766 | None:intergenic | 35.0% |
| AAATGCAAGCAATGAGATTG+TGG | - | chr3_1:78500815-78500834 | Msa0377840:CDS | 35.0% | |
| TGTGATATATGAGCTTCTTG+TGG | + | chr3_1:78500925-78500944 | None:intergenic | 35.0% | |
| ACAAGAAGCTCATATATCAC+AGG | - | chr3_1:78500924-78500943 | Msa0377840:CDS | 35.0% | |
| CTTGATCACTCTAGATGTAT+CGG | - | chr3_1:78501458-78501477 | Msa0377840:intron | 35.0% | |
| TGTATCGGAAGATGTAATCA+TGG | - | chr3_1:78501473-78501492 | Msa0377840:intron | 35.0% | |
| GGTAACAAGAATGATCTACA+TGG | + | chr3_1:78501568-78501587 | None:intergenic | 35.0% | |
| !! | ATTCTGATTTTCAGAGGCAT+AGG | - | chr3_1:78501711-78501730 | Msa0377840:CDS | 35.0% |
| !! | TTCTGATTTTCAGAGGCATA+GGG | - | chr3_1:78501712-78501731 | Msa0377840:CDS | 35.0% |
| TGTGGTGAGGAAATACTTAA+GGG | - | chr3_1:78501739-78501758 | Msa0377840:intron | 35.0% | |
| CTTAAGGGACAAACATAACT+TGG | - | chr3_1:78501754-78501773 | Msa0377840:intron | 35.0% | |
| GAAATGTGGTAAATGTTCAG+AGG | - | chr3_1:78501895-78501914 | Msa0377840:intron | 35.0% | |
| CCTATAGTATTCGATGAGAA+AGG | + | chr3_1:78501959-78501978 | None:intergenic | 35.0% | |
| CCTTTCTCATCGAATACTAT+AGG | - | chr3_1:78501956-78501975 | Msa0377840:intron | 35.0% | |
| TAGTTGACATGAGATACTGA+TGG | + | chr3_1:78502037-78502056 | None:intergenic | 35.0% | |
| CAACAAATTCATCCCTTGAA+TGG | - | chr3_1:78502157-78502176 | Msa0377840:intron | 35.0% | |
| AGGTACTCTTCATAAACTCA+TGG | - | chr3_1:78502360-78502379 | Msa0377840:five_prime_UTR | 35.0% | |
| GGTACTCTTCATAAACTCAT+GGG | - | chr3_1:78502361-78502380 | Msa0377840:five_prime_UTR | 35.0% | |
| ACACCAAGTAAAGTGATAAG+AGG | - | chr3_1:78502391-78502410 | Msa0377840:five_prime_UTR | 35.0% | |
| CACCAAGTAAAGTGATAAGA+GGG | - | chr3_1:78502392-78502411 | Msa0377840:five_prime_UTR | 35.0% | |
| ACCAAGTAAAGTGATAAGAG+GGG | - | chr3_1:78502393-78502412 | Msa0377840:five_prime_UTR | 35.0% | |
| GGGAGAGAAAATAGAGGAAA+TGG | + | chr3_1:78498697-78498716 | None:intergenic | 40.0% | |
| AAGAGAGGGAGAGAAAATAG+AGG | + | chr3_1:78498703-78498722 | None:intergenic | 40.0% | |
| AAGGAATATGTCTGGTAAGG+TGG | - | chr3_1:78499353-78499372 | Msa0377840:CDS | 40.0% | |
| GGATATTCTGTGTACAAGTG+TGG | - | chr3_1:78499435-78499454 | Msa0377840:CDS | 40.0% | |
| TATTCTGTGTACAAGTGTGG+TGG | - | chr3_1:78499438-78499457 | Msa0377840:CDS | 40.0% | |
| CAGTGATTCAGAACAGAAAG+AGG | + | chr3_1:78499885-78499904 | None:intergenic | 40.0% | |
| TCCTCGGAAAGATAGTTTGA+AGG | - | chr3_1:78500059-78500078 | Msa0377840:CDS | 40.0% | |
| GATGGAAATGGTGAGTACAA+TGG | - | chr3_1:78500117-78500136 | Msa0377840:CDS | 40.0% | |
| TCTTCGTCTGTGAACTTGAA+TGG | + | chr3_1:78500156-78500175 | None:intergenic | 40.0% | |
| AGAAGAACTGGAAAGTGAGT+TGG | - | chr3_1:78500173-78500192 | Msa0377840:CDS | 40.0% | |
| TGCCTTCTGAGTGACAATTT+AGG | + | chr3_1:78500204-78500223 | None:intergenic | 40.0% | |
| GTTATTTGGACCACCTTTGT+TGG | + | chr3_1:78500235-78500254 | None:intergenic | 40.0% | |
| ! | TGACAAATCAGCTCTGATAG+GGG | - | chr3_1:78500356-78500375 | Msa0377840:CDS | 40.0% |
| !! | TTTTGGAAACTTGTCGCTAG+AGG | - | chr3_1:78500410-78500429 | Msa0377840:CDS | 40.0% |
| TTTGGAAACTTGTCGCTAGA+GGG | - | chr3_1:78500411-78500430 | Msa0377840:CDS | 40.0% | |
| AAAGAGAAGCCAGTTACAGA+AGG | - | chr3_1:78500480-78500499 | Msa0377840:CDS | 40.0% | |
| TAATGGCAATTTGCCACTAG+AGG | - | chr3_1:78500560-78500579 | Msa0377840:CDS | 40.0% | |
| AGTGATAAATCAGCTCCAGT+TGG | - | chr3_1:78500615-78500634 | Msa0377840:CDS | 40.0% | |
| AACCTTGAAGGGGAAATTAC+TGG | - | chr3_1:78500642-78500661 | Msa0377840:CDS | 40.0% | |
| TTCCAGTAATTTCCCCTTCA+AGG | + | chr3_1:78500647-78500666 | None:intergenic | 40.0% | |
| TAATGGAAAATGGCCACAAG+AGG | - | chr3_1:78500692-78500711 | Msa0377840:CDS | 40.0% | |
| AATGGAAAATGGCCACAAGA+GGG | - | chr3_1:78500693-78500712 | Msa0377840:CDS | 40.0% | |
| CAATGACCAATCAGCTATAG+AGG | - | chr3_1:78500749-78500768 | Msa0377840:CDS | 40.0% | |
| TGGTATCCTCTATAGCTGAT+TGG | + | chr3_1:78500758-78500777 | None:intergenic | 40.0% | |
| AGAGGATACCAAATCTGAAG+TGG | - | chr3_1:78500767-78500786 | Msa0377840:CDS | 40.0% | |
| TGTTGTGTCCACTTCAGATT+TGG | + | chr3_1:78500778-78500797 | None:intergenic | 40.0% | |
| ATATGAGCTTCTTGTGGTTG+AGG | + | chr3_1:78500919-78500938 | None:intergenic | 40.0% | |
| GGAATGACCAGAAAAGGTAA+AGG | - | chr3_1:78500978-78500997 | Msa0377840:CDS | 40.0% | |
| TTGCTAATAGCTCCTCGTAT+GGG | - | chr3_1:78501003-78501022 | Msa0377840:CDS | 40.0% | |
| GTGTTGGACAATACACAACA+TGG | - | chr3_1:78501107-78501126 | Msa0377840:CDS | 40.0% | |
| CACAACATGGTAATTCACGT+TGG | - | chr3_1:78501120-78501139 | Msa0377840:CDS | 40.0% | |
| CTTTCATAGCCTGATCTGTA+AGG | + | chr3_1:78501185-78501204 | None:intergenic | 40.0% | |
| TACAGATCAGGCTATGAAAG+TGG | - | chr3_1:78501185-78501204 | Msa0377840:intron | 40.0% | |
| TCATCATGCACTCCATTTGA+TGG | + | chr3_1:78501215-78501234 | None:intergenic | 40.0% | |
| ATCAAATGGAGTGCATGATG+AGG | - | chr3_1:78501214-78501233 | Msa0377840:intron | 40.0% | |
| TCAAATGGAGTGCATGATGA+GGG | - | chr3_1:78501215-78501234 | Msa0377840:intron | 40.0% | |
| !!! | GAGAATGGTTTTGAAGTTGC+AGG | - | chr3_1:78501298-78501317 | Msa0377840:intron | 40.0% |
| ACAAATGGAAGAGTTTCTGC+TGG | - | chr3_1:78501356-78501375 | Msa0377840:intron | 40.0% | |
| TTCTGCTGGTGTATCTTACA+AGG | - | chr3_1:78501370-78501389 | Msa0377840:intron | 40.0% | |
| TCTGCTGGTGTATCTTACAA+GGG | - | chr3_1:78501371-78501390 | Msa0377840:intron | 40.0% | |
| !! | GGTATTGGTATGCAGAACTA+CGG | + | chr3_1:78501400-78501419 | None:intergenic | 40.0% |
| ! | CTTGTTGCTTCAGCTGAATA+AGG | + | chr3_1:78501536-78501555 | None:intergenic | 40.0% |
| AGAAGAATCTGCTAAGACAC+GGG | + | chr3_1:78501600-78501619 | None:intergenic | 40.0% | |
| GAGAAGAATCTGCTAAGACA+CGG | + | chr3_1:78501601-78501620 | None:intergenic | 40.0% | |
| TCATGTTGGAAATGAACACG+TGG | + | chr3_1:78501623-78501642 | None:intergenic | 40.0% | |
| ! | GCAACAATTTTGCACTGGAT+AGG | + | chr3_1:78501660-78501679 | None:intergenic | 40.0% |
| ! | GAAGAGCAACAATTTTGCAC+TGG | + | chr3_1:78501665-78501684 | None:intergenic | 40.0% |
| !! | TCTGTTTCACTGAAGCATTG+TGG | + | chr3_1:78501692-78501711 | None:intergenic | 40.0% |
| CTGTGGTGAGGAAATACTTA+AGG | - | chr3_1:78501738-78501757 | Msa0377840:CDS | 40.0% | |
| GTATGTCACAAGCTGAAATG+TGG | - | chr3_1:78501881-78501900 | Msa0377840:intron | 40.0% | |
| CAAATTCATCCCTTGAATGG+TGG | - | chr3_1:78502160-78502179 | Msa0377840:intron | 40.0% | |
| TTGAGCTAGGAGAGACATTT+GGG | + | chr3_1:78502198-78502217 | None:intergenic | 40.0% | |
| TTTGCCTTGAATGTTGAGCT+AGG | + | chr3_1:78502211-78502230 | None:intergenic | 40.0% | |
| ! | GTTGATTCATCTGTATCCGT+TGG | + | chr3_1:78502271-78502290 | None:intergenic | 40.0% |
| ACGGATACAGATGAATCAAC+TGG | - | chr3_1:78502271-78502290 | Msa0377840:CDS | 40.0% | |
| TTTCCTGGTTTCAGACATAC+TGG | + | chr3_1:78502305-78502324 | None:intergenic | 40.0% | |
| ! | CTTTTCTGCTGACAATTTCC+TGG | + | chr3_1:78502320-78502339 | None:intergenic | 40.0% |
| CAGGAAATTGTCAGCAGAAA+AGG | - | chr3_1:78502318-78502337 | Msa0377840:five_prime_UTR | 40.0% | |
| GAAATTGTCAGCAGAAAAGG+AGG | - | chr3_1:78502321-78502340 | Msa0377840:five_prime_UTR | 40.0% | |
| !!! | TGAAGAGTACCTTTTTGTGG+AGG | + | chr3_1:78502352-78502371 | None:intergenic | 40.0% |
| !! | TGGATCGGATTGGTAGTTGA+AGG | + | chr3_1:78498837-78498856 | None:intergenic | 45.0% |
| ATACCTTGGTTGGATCGGAT+TGG | + | chr3_1:78498847-78498866 | None:intergenic | 45.0% | |
| ACAGAATATCCTTGAGGCTC+TGG | + | chr3_1:78499426-78499445 | None:intergenic | 45.0% | |
| CAAGAAATCAATGCAGCTCC+TGG | - | chr3_1:78499976-78499995 | Msa0377840:CDS | 45.0% | |
| ! | ACAAGATCCGATGCTTTTCC+AGG | + | chr3_1:78499997-78500016 | None:intergenic | 45.0% |
| !!! | GCATCGGATCTTGTTTTTGC+AGG | - | chr3_1:78500003-78500022 | Msa0377840:CDS | 45.0% |
| GAAAACGTCAGGTTCTTCCT+CGG | - | chr3_1:78500043-78500062 | Msa0377840:CDS | 45.0% | |
| GCCTTCAAACTATCTTTCCG+AGG | + | chr3_1:78500063-78500082 | None:intergenic | 45.0% | |
| GGAAATGGTGAGTACAATGG+CGG | - | chr3_1:78500120-78500139 | Msa0377840:CDS | 45.0% | |
| GTTCACAGACGAAGAAGAAC+TGG | - | chr3_1:78500161-78500180 | Msa0377840:CDS | 45.0% | |
| ! | AGGCATAGAGTGTCCAACAA+AGG | - | chr3_1:78500219-78500238 | Msa0377840:CDS | 45.0% |
| ! | CATAGAGTGTCCAACAAAGG+TGG | - | chr3_1:78500222-78500241 | Msa0377840:CDS | 45.0% |
| CATCACTCACTGTGAGATTG+AGG | - | chr3_1:78500254-78500273 | Msa0377840:CDS | 45.0% | |
| GGATTTGCACCTTCTGTAAC+TGG | + | chr3_1:78500492-78500511 | None:intergenic | 45.0% | |
| ! | AGAAGGTGCAAATCCTGAAG+TGG | - | chr3_1:78500497-78500516 | Msa0377840:CDS | 45.0% |
| ! | CAGTTGGTACGAACCTTGAA+GGG | - | chr3_1:78500631-78500650 | Msa0377840:CDS | 45.0% |
| ! | AGTTGGTACGAACCTTGAAG+GGG | - | chr3_1:78500632-78500651 | Msa0377840:CDS | 45.0% |
| ! | TCTGAAGTGGACACAACAGA+AGG | - | chr3_1:78500780-78500799 | Msa0377840:CDS | 45.0% |
| AATGCTTACACCGTTGCTGA+AGG | - | chr3_1:78500957-78500976 | Msa0377840:CDS | 45.0% | |
| TCTGGTCATTCCTTCAGCAA+CGG | + | chr3_1:78500970-78500989 | None:intergenic | 45.0% | |
| GCTGAAGGAATGACCAGAAA+AGG | - | chr3_1:78500972-78500991 | Msa0377840:CDS | 45.0% | |
| ! | AGCAAGGCCTTTACCTTTTC+TGG | + | chr3_1:78500988-78501007 | None:intergenic | 45.0% |
| CATACGAGGAGCTATTAGCA+AGG | + | chr3_1:78501004-78501023 | None:intergenic | 45.0% | |
| CTTGCTAATAGCTCCTCGTA+TGG | - | chr3_1:78501002-78501021 | Msa0377840:CDS | 45.0% | |
| TGCTAATAGCTCCTCGTATG+GGG | - | chr3_1:78501004-78501023 | Msa0377840:CDS | 45.0% | |
| CTGTGCTGTCTTTCATGACA+TGG | + | chr3_1:78501073-78501092 | None:intergenic | 45.0% | |
| ! | GATCTGTAAGGCATTCTCGA+TGG | + | chr3_1:78501173-78501192 | None:intergenic | 45.0% |
| TCGAGAATGCCTTACAGATC+AGG | - | chr3_1:78501173-78501192 | Msa0377840:intron | 45.0% | |
| CAAGACTCGCTATATGAGTG+AGG | - | chr3_1:78501331-78501350 | Msa0377840:intron | 45.0% | |
| CTGCTGGTGTATCTTACAAG+GGG | - | chr3_1:78501372-78501391 | Msa0377840:intron | 45.0% | |
| GAAGGTCATGGCTATGGTAT+TGG | + | chr3_1:78501415-78501434 | None:intergenic | 45.0% | |
| CATAGCCATGACCTTCATGA+GGG | - | chr3_1:78501419-78501438 | Msa0377840:intron | 45.0% | |
| GAGAAAACCTTCCCTCATGA+AGG | + | chr3_1:78501433-78501452 | None:intergenic | 45.0% | |
| CTAAGACACGGGAACAACAA+TGG | + | chr3_1:78501589-78501608 | None:intergenic | 45.0% | |
| ! | TGGGTTTTGCAGGTGAATAC+TGG | + | chr3_1:78502063-78502082 | None:intergenic | 45.0% |
| GTTGAGCTAGGAGAGACATT+TGG | + | chr3_1:78502199-78502218 | None:intergenic | 45.0% | |
| CTCTCCTAGCTCAACATTCA+AGG | - | chr3_1:78502204-78502223 | Msa0377840:intron | 45.0% | |
| GAGGTAAAGCCTCCACAAAA+AGG | - | chr3_1:78502340-78502359 | Msa0377840:five_prime_UTR | 45.0% | |
| GCCCCTCTTATCACTTTACT+TGG | + | chr3_1:78502397-78502416 | None:intergenic | 45.0% | |
| CTACCAATCCGATCCAACCA+AGG | - | chr3_1:78498841-78498860 | Msa0377840:CDS | 50.0% | |
| TGGGGCCAAGACTCTACATT+TGG | - | chr3_1:78499304-78499323 | Msa0377840:CDS | 50.0% | |
| GGAAGAAGTTGCCGGCATTT+AGG | + | chr3_1:78499405-78499424 | None:intergenic | 50.0% | |
| CAACTTCTTCCAGAGCCTCA+AGG | - | chr3_1:78499414-78499433 | Msa0377840:CDS | 50.0% | |
| !! | GTGTACAAGTGTGGTGGATG+TGG | - | chr3_1:78499444-78499463 | Msa0377840:CDS | 50.0% |
| ! | TGCAGCTCCTGGAAAAGCAT+CGG | - | chr3_1:78499987-78500006 | Msa0377840:CDS | 50.0% |
| GATAGGGGACAGACCTGAAA+TGG | - | chr3_1:78500371-78500390 | Msa0377840:CDS | 50.0% | |
| !! | GCAGATGCGGTGTTGATTTC+TGG | - | chr3_1:78500435-78500454 | Msa0377840:CDS | 50.0% |
| CCTTCAAGGTTCGTACCAAC+TGG | + | chr3_1:78500633-78500652 | None:intergenic | 50.0% | |
| ! | CCAGTTGGTACGAACCTTGA+AGG | - | chr3_1:78500630-78500649 | Msa0377840:CDS | 50.0% |
| AAATGGCCACAAGAGGGAGA+AGG | - | chr3_1:78500699-78500718 | Msa0377840:CDS | 50.0% | |
| TGTTCCAAGATCCCCATACG+AGG | + | chr3_1:78501018-78501037 | None:intergenic | 50.0% | |
| GATCAGGCTATGAAAGTGGC+AGG | - | chr3_1:78501189-78501208 | Msa0377840:intron | 50.0% | |
| GAAAGTGGCAGGCCATCAAA+TGG | - | chr3_1:78501200-78501219 | Msa0377840:intron | 50.0% | |
| CCTCATGAAGGTCATGGCTA+TGG | + | chr3_1:78501421-78501440 | None:intergenic | 50.0% | |
| CCATAGCCATGACCTTCATG+AGG | - | chr3_1:78501418-78501437 | Msa0377840:intron | 50.0% | |
| ACCTTCCCTCATGAAGGTCA+TGG | + | chr3_1:78501427-78501446 | None:intergenic | 50.0% | |
| CGAGTACTTATGCCTTTGGC+GGG | + | chr3_1:78501507-78501526 | None:intergenic | 50.0% | |
| GCGAGTACTTATGCCTTTGG+CGG | + | chr3_1:78501508-78501527 | None:intergenic | 50.0% | |
| ! | GCCAAAGGCATAAGTACTCG+CGG | - | chr3_1:78501507-78501526 | Msa0377840:intron | 50.0% |
| TCCGCGAGTACTTATGCCTT+TGG | + | chr3_1:78501511-78501530 | None:intergenic | 50.0% | |
| TAAGCGACATCACAAGCCAG+TGG | - | chr3_1:78501778-78501797 | Msa0377840:intron | 50.0% | |
| AATCTGCAGGTAGCTGAAGC+AGG | + | chr3_1:78501844-78501863 | None:intergenic | 50.0% | |
| CACTAACCACCTCGCTTCTA+CGG | + | chr3_1:78502003-78502022 | None:intergenic | 50.0% | |
| TAATGCAATCGCGGCTCCAA+CGG | - | chr3_1:78502252-78502271 | Msa0377840:CDS | 50.0% | |
| CCTGGTTTCAGACATACTGG+AGG | + | chr3_1:78502302-78502321 | None:intergenic | 50.0% | |
| ! | CCTCCAGTATGTCTGAAACC+AGG | - | chr3_1:78502299-78502318 | Msa0377840:five_prime_UTR | 50.0% |
| !! | GAGGCTCTGGAAGAAGTTGC+CGG | + | chr3_1:78499413-78499432 | None:intergenic | 55.0% |
| !! | GGATGTGGCACTGACCTTCA+AGG | - | chr3_1:78499459-78499478 | Msa0377840:CDS | 55.0% |
| TCCTCTCCTTCTCCCTCTTG+TGG | + | chr3_1:78500708-78500727 | None:intergenic | 55.0% | |
| AGCTCCTCGTATGGGGATCT+TGG | - | chr3_1:78501011-78501030 | Msa0377840:CDS | 55.0% | |
| TCTTTCACACGACTCGCGTG+AGG | - | chr3_1:78501247-78501266 | Msa0377840:intron | 55.0% | |
| GCCATGACCTTCATGAGGGA+AGG | - | chr3_1:78501423-78501442 | Msa0377840:intron | 55.0% | |
| ATGGAATTGCGTCCCGCCAA+AGG | - | chr3_1:78501492-78501511 | Msa0377840:intron | 55.0% | |
| ! | TCAGAGGCATAGGGCTACTG+TGG | - | chr3_1:78501721-78501740 | Msa0377840:CDS | 55.0% |
| CTACGGTGAAGCTCACGAGA+TGG | + | chr3_1:78501986-78502005 | None:intergenic | 55.0% | |
| TGAGCTTCACCGTAGAAGCG+AGG | - | chr3_1:78501991-78502010 | Msa0377840:intron | 55.0% | |
| CGTAGAAGCGAGGTGGTTAG+TGG | - | chr3_1:78502001-78502020 | Msa0377840:intron | 55.0% | |
| GTCGCTAGAGGGAGCAGATG+CGG | - | chr3_1:78500422-78500441 | Msa0377840:CDS | 60.0% | |
| GCCACAAGAGGGAGAAGGAG+AGG | - | chr3_1:78500704-78500723 | Msa0377840:CDS | 60.0% | |
| GGCATAGGGCTACTGTGGTG+AGG | - | chr3_1:78501726-78501745 | Msa0377840:CDS | 60.0% | |
| CGACATCACAAGCCAGTGGC+AGG | - | chr3_1:78501782-78501801 | Msa0377840:intron | 60.0% | |
| CATCACAAGCCAGTGGCAGG+TGG | - | chr3_1:78501785-78501804 | Msa0377840:intron | 60.0% | |
| AAAGGAGCTCCACCTGCCAC+TGG | + | chr3_1:78501797-78501816 | None:intergenic | 60.0% | |
| GCTTCACCGTAGAAGCGAGG+TGG | - | chr3_1:78501994-78502013 | Msa0377840:intron | 60.0% | |
| CTCGCGTGAGGACACTGACC+AGG | - | chr3_1:78501259-78501278 | Msa0377840:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 78498687 | 78502426 | 78498687 | ID=Msa0377840;Name=Msa0377840 |
| chr3_1 | mRNA | 78498687 | 78502426 | 78498687 | ID=Msa0377840-mRNA-1;Parent=Msa0377840;Name=Msa0377840-mRNA-1;_AED=0.03;_eAED=0.03;_QI=132|0|0.33|1|0.5|0.33|3|0|886 |
| chr3_1 | exon | 78498687 | 78501178 | 78498687 | ID=Msa0377840-mRNA-1:exon:18946;Parent=Msa0377840-mRNA-1 |
| chr3_1 | exon | 78501633 | 78501757 | 78501633 | ID=Msa0377840-mRNA-1:exon:18945;Parent=Msa0377840-mRNA-1 |
| chr3_1 | exon | 78502251 | 78502426 | 78502251 | ID=Msa0377840-mRNA-1:exon:18944;Parent=Msa0377840-mRNA-1 |
| chr3_1 | five_prime_UTR | 78502295 | 78502426 | 78502295 | ID=Msa0377840-mRNA-1:five_prime_utr;Parent=Msa0377840-mRNA-1 |
| chr3_1 | CDS | 78502251 | 78502294 | 78502251 | ID=Msa0377840-mRNA-1:cds;Parent=Msa0377840-mRNA-1 |
| chr3_1 | CDS | 78501633 | 78501757 | 78501633 | ID=Msa0377840-mRNA-1:cds;Parent=Msa0377840-mRNA-1 |
| chr3_1 | CDS | 78498687 | 78501178 | 78498687 | ID=Msa0377840-mRNA-1:cds;Parent=Msa0377840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
