Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174670 | XP_013444467.1 | 98.614 | 505 | 7 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174670 | sp|Q28EW0|TM87A_XENTR | 35.125 | 279 | 168 | 5 | 191 | 461 | 197 | 470 | 1.04e-46 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0606100 | Msa1174670 | 0.802806 | 4.710287e-49 | -8.615850e-47 |
| Msa0607800 | Msa1174670 | 0.805787 | 1.127853e-49 | -8.615850e-47 |
| Msa0614550 | Msa1174670 | 0.806814 | 6.850540e-50 | -8.615850e-47 |
| Msa0615630 | Msa1174670 | 0.805456 | 1.323500e-49 | -8.615850e-47 |
| Msa0648040 | Msa1174670 | 0.805493 | 1.300199e-49 | -8.615850e-47 |
| Msa0654740 | Msa1174670 | 0.811575 | 6.537674e-51 | -8.615850e-47 |
| Msa0687090 | Msa1174670 | 0.804738 | 1.870184e-49 | -8.615850e-47 |
| Msa0690740 | Msa1174670 | 0.808299 | 3.315494e-50 | -8.615850e-47 |
| Msa0159590 | Msa1174670 | 0.806956 | 6.394082e-50 | -8.615850e-47 |
| Msa0166170 | Msa1174670 | 0.800335 | 1.512564e-48 | -8.615850e-47 |
| Msa0213610 | Msa1174670 | 0.818418 | 1.981195e-52 | -8.615850e-47 |
| Msa1003740 | Msa1174670 | 0.803668 | 3.122965e-49 | -8.615850e-47 |
| Msa1003930 | Msa1174670 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa1078880 | Msa1174670 | 0.816947 | 4.253082e-52 | -8.615850e-47 |
| Msa1078970 | Msa1174670 | 0.806836 | 6.779517e-50 | -8.615850e-47 |
| Msa0293040 | Msa1174670 | 0.820029 | 8.511711e-53 | -8.615850e-47 |
| Msa0324830 | Msa1174670 | 0.801148 | 1.032193e-48 | -8.615850e-47 |
| Msa1123200 | Msa1174670 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa1127280 | Msa1174670 | 0.821636 | 3.634507e-53 | -8.615850e-47 |
| Msa1165480 | Msa1174670 | 0.819719 | 1.002186e-52 | -8.615850e-47 |
| Msa1169190 | Msa1174670 | 0.822027 | 2.951166e-53 | -8.615850e-47 |
| Msa1174670 | Msa1186520 | 0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa1174670 | Msa1234870 | 0.956054 | 7.267638e-114 | -8.615850e-47 |
| Msa1174670 | Msa1263740 | 0.806907 | 6.549181e-50 | -8.615850e-47 |
| Msa1174670 | Msa1263780 | 0.801297 | 9.623099e-49 | -8.615850e-47 |
| Msa1174670 | Msa1279150 | 0.840763 | 7.149283e-58 | -8.615850e-47 |
| Msa1174670 | Msa1294790 | 0.800113 | 1.678633e-48 | -8.615850e-47 |
| Msa1174670 | Msa1314980 | 0.897282 | 1.634665e-76 | -8.615850e-47 |
| Msa1174670 | Msa1339170 | 0.800474 | 1.417266e-48 | -8.615850e-47 |
| Msa1174670 | Msa1393560 | 0.804349 | 2.254539e-49 | -8.615850e-47 |
| Msa1174670 | Msa1393850 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa1174670 | Msa1400010 | 0.800198 | 1.612436e-48 | -8.615850e-47 |
| Msa0484570 | Msa1174670 | 0.810460 | 1.140172e-50 | -8.615850e-47 |
| Msa0561560 | Msa1174670 | 0.812679 | 3.754579e-51 | -8.615850e-47 |
| Msa0863620 | Msa1174670 | 0.800657 | 1.300201e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174670 | MtrunA17_Chr8g0344451 | 98.614 | 505 | 7 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1031 |
| Msa1174670 | MtrunA17_Chr2g0278311 | 57.675 | 456 | 188 | 4 | 20 | 472 | 23 | 476 | 0.0 | 550 |
| Msa1174670 | MtrunA17_Chr5g0428321 | 49.237 | 524 | 238 | 8 | 7 | 505 | 21 | 541 | 1.01e-175 | 505 |
| Msa1174670 | MtrunA17_Chr8g0334581 | 43.849 | 504 | 231 | 8 | 17 | 505 | 25 | 491 | 6.94e-137 | 404 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174670 | AT1G72480.1 | 70.122 | 492 | 142 | 2 | 19 | 505 | 18 | 509 | 0.0 | 723 |
| Msa1174670 | AT2G01070.1 | 52.621 | 496 | 214 | 5 | 14 | 505 | 18 | 496 | 0.0 | 531 |
| Msa1174670 | AT2G01070.2 | 55.430 | 442 | 182 | 3 | 14 | 451 | 18 | 448 | 4.33e-179 | 511 |
| Msa1174670 | AT1G61670.1 | 47.843 | 510 | 243 | 5 | 9 | 505 | 14 | 513 | 9.26e-162 | 469 |
| Msa1174670 | AT1G61670.2 | 47.843 | 510 | 243 | 5 | 9 | 505 | 14 | 513 | 9.26e-162 | 469 |
| Msa1174670 | AT1G10980.1 | 38.925 | 465 | 264 | 9 | 6 | 456 | 10 | 468 | 1.13e-104 | 323 |
Find 133 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCAATATGTTAGATTT+TGG | 0.195422 | 8_1:+5815496 | Msa1174670:CDS |
| CTTAAGGATTTGGTTGTAGA+AGG | 0.250919 | 8_1:+5815363 | Msa1174670:CDS |
| ATAAAATAAAATAAACTAAA+AGG | 0.262053 | 8_1:-5817288 | None:intergenic |
| TAGACGTGTTCTTCATTCTT+TGG | 0.274888 | 8_1:+5815883 | Msa1174670:CDS |
| TGATCCAAGGCTTAAGGATT+TGG | 0.284489 | 8_1:+5815353 | Msa1174670:CDS |
| CTTGGATCATCCCAGCCTTT+TGG | 0.296514 | 8_1:+5816529 | Msa1174670:CDS |
| ATGTGTTGCTTGGGATCTTT+TGG | 0.297305 | 8_1:+5815472 | Msa1174670:CDS |
| ACATCCTTTGGTAAAATAGA+TGG | 0.305214 | 8_1:-5817096 | None:intergenic |
| TAGAAGGATGATGATAAAAT+TGG | 0.315716 | 8_1:+5816161 | Msa1174670:CDS |
| CGGTGCAATAAGTGATCTTT+CGG | 0.324651 | 8_1:+5815821 | Msa1174670:CDS |
| TGTGTGTCATCTGTGTTGTC+TGG | 0.328516 | 8_1:+5816574 | Msa1174670:CDS |
| TTTCCATTGTTTCCTTGTAC+TGG | 0.329963 | 8_1:-5817138 | None:intergenic |
| CCTGCAGTTACTTGTAAGAT+TGG | 0.333455 | 8_1:+5817360 | Msa1174670:three_prime_UTR |
| TGTCTGTTGCACTGGTGATC+TGG | 0.344568 | 8_1:+5815155 | Msa1174670:CDS |
| CCGTCCTTCTACAGTGAATT+CGG | 0.349432 | 8_1:+5815215 | Msa1174670:CDS |
| ACAACAAAAGCGTTGCCTTT+GGG | 0.350791 | 8_1:-5814148 | None:intergenic |
| TGCAACTTTGAATAAGCTTC+AGG | 0.353143 | 8_1:+5815923 | Msa1174670:CDS |
| GACAACAAAAGCGTTGCCTT+TGG | 0.359766 | 8_1:-5814149 | None:intergenic |
| GATTCCTGTTTCGCTAAATT+CGG | 0.371232 | 8_1:-5815604 | None:intergenic |
| AGAGAAAGAGGTTTCATTGA+GGG | 0.381199 | 8_1:-5814203 | None:intergenic |
| AGGAATTGAAGGAGAGAAAG+AGG | 0.392808 | 8_1:-5814215 | None:intergenic |
| ACTGTATGGGCAGTTACCTT+TGG | 0.396776 | 8_1:+5815642 | Msa1174670:CDS |
| TCCTTTGCATATGTGTTGCT+TGG | 0.397047 | 8_1:+5815462 | Msa1174670:CDS |
| TCACTGTGATCCAAGGCTTA+AGG | 0.398022 | 8_1:+5815347 | Msa1174670:CDS |
| GGTGCAATAAGTGATCTTTC+GGG | 0.400446 | 8_1:+5815822 | Msa1174670:CDS |
| TTATAGAGCTAATGATATAA+TGG | 0.406119 | 8_1:-5817226 | None:intergenic |
| GAAACAGGAATCAGGCCAAC+TGG | 0.406851 | 8_1:+5815615 | Msa1174670:CDS |
| CAATTCCTGACTCTTTCATA+AGG | 0.416600 | 8_1:+5814230 | Msa1174670:CDS |
| GAGAGAGAAGGAGTGGGGTG+TGG | 0.419555 | 8_1:-5814028 | None:intergenic |
| GGCCAACTGGGACAACTGTA+TGG | 0.419983 | 8_1:+5815628 | Msa1174670:CDS |
| CCTTTGCATATGTGTTGCTT+GGG | 0.421476 | 8_1:+5815463 | Msa1174670:CDS |
| ACAATTGGTGGTTCGGCCTA+TGG | 0.426657 | 8_1:+5815120 | Msa1174670:CDS |
| GACAGAACTTGCCAAAAGGC+TGG | 0.431101 | 8_1:-5816540 | None:intergenic |
| TTGATAATTCCTTGTTTCTA+CGG | 0.431625 | 8_1:-5815044 | None:intergenic |
| ATGCAATGTAACAGGCTAGA+AGG | 0.432134 | 8_1:+5816145 | Msa1174670:intron |
| CATATGCAAAGGACATGAAC+TGG | 0.433132 | 8_1:-5815452 | None:intergenic |
| TAGGAAGTTCACCAATGCTT+TGG | 0.435399 | 8_1:+5816191 | Msa1174670:CDS |
| GTGGAAGATAGAGAGACAAT+TGG | 0.436551 | 8_1:+5815105 | Msa1174670:CDS |
| CAGTCCGAATTCACTGTAGA+AGG | 0.442631 | 8_1:-5815219 | None:intergenic |
| TATTACCTTATGAAAGAGTC+AGG | 0.444051 | 8_1:-5814235 | None:intergenic |
| GTGTGTCATCTGTGTTGTCT+GGG | 0.457926 | 8_1:+5816575 | Msa1174670:CDS |
| ACAACCAAATCCTTAAGCCT+TGG | 0.460415 | 8_1:-5815357 | None:intergenic |
| TCCATGATAAAAGTATAGTT+CGG | 0.465015 | 8_1:+5817385 | Msa1174670:three_prime_UTR |
| GAAATACAAATTATACATTC+CGG | 0.466974 | 8_1:-5815322 | None:intergenic |
| ATGAGCAATGGCAAAATGCT+TGG | 0.468783 | 8_1:+5816511 | Msa1174670:CDS |
| TCCGGCACACTAACATCCTT+TGG | 0.469420 | 8_1:-5817108 | None:intergenic |
| TTTCATAGGTGCCATTCTAC+CGG | 0.470578 | 8_1:-5815421 | None:intergenic |
| TAGAGAGACAATTGGTGGTT+CGG | 0.471497 | 8_1:+5815113 | Msa1174670:CDS |
| TGATAAAATTGGATATGTAT+AGG | 0.472188 | 8_1:+5816172 | Msa1174670:CDS |
| AATTTAGCGAAACAGGAATC+AGG | 0.482089 | 8_1:+5815607 | Msa1174670:CDS |
| CAAAGGGCTGTCTGTTGCAC+TGG | 0.484472 | 8_1:+5815147 | Msa1174670:CDS |
| GCATAATCACCTTTGATGTA+AGG | 0.485506 | 8_1:-5815746 | None:intergenic |
| AATGAAGAACACGTCTAATA+CGG | 0.487209 | 8_1:-5815877 | None:intergenic |
| CCTTGTACTGGTCTAGCATC+CGG | 0.487817 | 8_1:-5817126 | None:intergenic |
| GAGAGAAAGAGGTTTCATTG+AGG | 0.491311 | 8_1:-5814204 | None:intergenic |
| TTTGGTTGTAGAAGGGAAAA+CGG | 0.491750 | 8_1:+5815371 | Msa1174670:CDS |
| TTAAGGATTTGGTTGTAGAA+GGG | 0.493677 | 8_1:+5815364 | Msa1174670:CDS |
| ACATCAAAGGTGATTATGCT+TGG | 0.495017 | 8_1:+5815750 | Msa1174670:CDS |
| ACCAAAGGATGTTAGTGTGC+CGG | 0.505081 | 8_1:+5817107 | Msa1174670:CDS |
| CAACAAAAGCGTTGCCTTTG+GGG | 0.506916 | 8_1:-5814147 | None:intergenic |
| AGGAGTGGGGTGTGGATCTG+TGG | 0.509103 | 8_1:-5814020 | None:intergenic |
| AAACTTGGTGTGTGCAATGA+AGG | 0.512261 | 8_1:+5815180 | Msa1174670:CDS |
| AACACGTCTAATACGGCAGC+AGG | 0.523540 | 8_1:-5815870 | None:intergenic |
| ACTGGTGATCTGGCAAAACT+TGG | 0.524523 | 8_1:+5815165 | Msa1174670:CDS |
| TCAAATACAACAGCTTGAAT+CGG | 0.526663 | 8_1:-5815081 | None:intergenic |
| AAATTCCTTCACTTCCTCCA+TGG | 0.529822 | 8_1:-5814171 | None:intergenic |
| TCAAGCTGTTGTATTTGAAG+TGG | 0.531264 | 8_1:+5815086 | Msa1174670:CDS |
| ATGAAAGAGTCAGGAATTGA+AGG | 0.531275 | 8_1:-5814226 | None:intergenic |
| TTAATCGTTTCAATGGGCTA+TGG | 0.532401 | 8_1:+5815699 | Msa1174670:CDS |
| GGTGTTGTGAGACCTACTCT+TGG | 0.533241 | 8_1:+5815720 | Msa1174670:CDS |
| TGGCTATCTACCCGGTAGAA+TGG | 0.533484 | 8_1:+5815410 | Msa1174670:CDS |
| GTTGTCCATGGAGGAAGTGA+AGG | 0.536293 | 8_1:+5814166 | Msa1174670:CDS |
| ACAGAACTTGCCAAAAGGCT+GGG | 0.536502 | 8_1:-5816539 | None:intergenic |
| CACAGCTACTGCCAAAGCAT+TGG | 0.539058 | 8_1:-5816202 | None:intergenic |
| AGTAGCTGTGGTTGTATCTG+TGG | 0.546402 | 8_1:+5816215 | Msa1174670:CDS |
| ATGGGAGCGAAGAGTTCGAT+AGG | 0.546538 | 8_1:+5817046 | Msa1174670:CDS |
| GTAAGACAGAACTTGCCAAA+AGG | 0.547149 | 8_1:-5816544 | None:intergenic |
| ATTTCATTCACTGTGATCCA+AGG | 0.552944 | 8_1:+5815340 | Msa1174670:CDS |
| CGTTCTCTTGATAGTTCCAA+AGG | 0.554745 | 8_1:-5815658 | None:intergenic |
| TCTTGGAGGCCTTACATCAA+AGG | 0.555675 | 8_1:+5815737 | Msa1174670:CDS |
| CAATGCTTTGGCAGTAGCTG+TGG | 0.556217 | 8_1:+5816203 | Msa1174670:CDS |
| AACACTCGGCATGTTTGAGA+TGG | 0.559304 | 8_1:+5815560 | Msa1174670:CDS |
| GTTCGGCCTATGGAGGTCAA+AGG | 0.561879 | 8_1:+5815130 | Msa1174670:CDS |
| TTCGGCCTATGGAGGTCAAA+GGG | 0.562746 | 8_1:+5815131 | Msa1174670:CDS |
| AGTGTTATGCAGTTCTGCAA+TGG | 0.563040 | 8_1:-5815531 | None:intergenic |
| CTGTGGTTGTATCTGTGGGA+TGG | 0.563356 | 8_1:+5816220 | Msa1174670:CDS |
| TCAAAGGTGATTATGCTTGG+TGG | 0.563894 | 8_1:+5815753 | Msa1174670:CDS |
| TTGTAGAAGGGAAAACGGTA+TGG | 0.564102 | 8_1:+5815376 | Msa1174670:CDS |
| GTAGCTGTGGTTGTATCTGT+GGG | 0.568371 | 8_1:+5816216 | Msa1174670:CDS |
| GCGATCTGAATAGATTTGAT+CGG | 0.570521 | 8_1:-5815294 | None:intergenic |
| TTCATAGGTGCCATTCTACC+GGG | 0.571888 | 8_1:-5815420 | None:intergenic |
| TGCATCTGAAGTGCTTGAGT+TGG | 0.574697 | 8_1:+5815788 | Msa1174670:CDS |
| CTTTGGAACTATCAAGAGAA+CGG | 0.576048 | 8_1:+5815659 | Msa1174670:CDS |
| GATGTAAGGCCTCCAAGAGT+AGG | 0.579380 | 8_1:-5815732 | None:intergenic |
| GCCCATACAGTTGTCCCAGT+TGG | 0.582069 | 8_1:-5815630 | None:intergenic |
| ATGATATATACAATGAGCAA+TGG | 0.584957 | 8_1:+5816499 | Msa1174670:CDS |
| CCAATCTTACAAGTAACTGC+AGG | 0.585387 | 8_1:-5817360 | None:intergenic |
| ACGGTATGGAAGAATCCCTC+TGG | 0.586507 | 8_1:+5815390 | Msa1174670:CDS |
| CATGTATGCATGCATGCACA+TGG | 0.590273 | 8_1:-5817467 | None:intergenic |
| GCCAACTGGGACAACTGTAT+GGG | 0.590383 | 8_1:+5815629 | Msa1174670:CDS |
| TGGTGTGTGCAATGAAGGAC+AGG | 0.592622 | 8_1:+5815185 | Msa1174670:CDS |
| GTTGTGAGACCTACTCTTGG+AGG | 0.595017 | 8_1:+5815723 | Msa1174670:CDS |
| CCGGATGCTAGACCAGTACA+AGG | 0.595061 | 8_1:+5817126 | Msa1174670:CDS |
| AGATATGCTTACCGTGACGA+TGG | 0.595374 | 8_1:+5817027 | Msa1174670:intron |
| CTTCTACAGTGAATTCGGAC+TGG | 0.597379 | 8_1:+5815220 | Msa1174670:CDS |
| GATATGCTTACCGTGACGAT+GGG | 0.597669 | 8_1:+5817028 | Msa1174670:intron |
| AATAAGCTAGAATATAGCTA+TGG | 0.599904 | 8_1:+5817193 | Msa1174670:exon |
| AAACAGGAATCAGGCCAACT+GGG | 0.601977 | 8_1:+5815616 | Msa1174670:CDS |
| AGTCACATTCCGTAGAAACA+AGG | 0.604075 | 8_1:+5815035 | Msa1174670:CDS |
| AGAATTGTAAGAACTGTGAG+AGG | 0.606225 | 8_1:-5814061 | None:intergenic |
| ATTGGTGGTTCGGCCTATGG+AGG | 0.610044 | 8_1:+5815123 | Msa1174670:CDS |
| TGGGAGCGAAGAGTTCGATA+GGG | 0.610656 | 8_1:+5817047 | Msa1174670:CDS |
| GAAGATAGAGAGACAATTGG+TGG | 0.619803 | 8_1:+5815108 | Msa1174670:CDS |
| AATTATCAAACTTTAGCTCG+TGG | 0.622921 | 8_1:+5815058 | Msa1174670:CDS |
| AGACCAGTACAAGGAAACAA+TGG | 0.626146 | 8_1:+5817135 | Msa1174670:CDS |
| AACGCGACGCCGAAAACTTG+AGG | 0.627067 | 8_1:-5815243 | None:intergenic |
| CCCAAGCAACACATATGCAA+AGG | 0.627872 | 8_1:-5815463 | None:intergenic |
| AATCCCTCTGGCTATCTACC+CGG | 0.632875 | 8_1:+5815402 | Msa1174670:CDS |
| AACAAAAGCGTTGCCTTTGG+GGG | 0.633130 | 8_1:-5814146 | None:intergenic |
| GAATTGTAAGAACTGTGAGA+GGG | 0.646971 | 8_1:-5814060 | None:intergenic |
| ACTCTTCGCTCCCATCGTCA+CGG | 0.648119 | 8_1:-5817038 | None:intergenic |
| AATTGTAAGAACTGTGAGAG+GGG | 0.650924 | 8_1:-5814059 | None:intergenic |
| CACCATCTCAAAATTCAACA+CGG | 0.653546 | 8_1:+5816598 | Msa1174670:CDS |
| CTATCAAGAGAACGGTTGCG+AGG | 0.659792 | 8_1:+5815667 | Msa1174670:CDS |
| CCGAATTCACTGTAGAAGGA+CGG | 0.663014 | 8_1:-5815215 | None:intergenic |
| GACAGCCCTTTGACCTCCAT+AGG | 0.665364 | 8_1:-5815136 | None:intergenic |
| TGTGGGATGGATATGCTATG+AGG | 0.666058 | 8_1:+5816233 | Msa1174670:CDS |
| CTTGAGTTGGTAGAACATGT+CGG | 0.689634 | 8_1:+5815801 | Msa1174670:CDS |
| ATAACACTAGTGATAACACT+CGG | 0.692289 | 8_1:+5815546 | Msa1174670:CDS |
| TGCATGCATGCATACATGTG+AGG | 0.694351 | 8_1:+5817472 | Msa1174670:three_prime_UTR |
| GCATGCATGCATACATGTGA+GGG | 0.696579 | 8_1:+5817473 | Msa1174670:three_prime_UTR |
| CTACCGGGTAGATAGCCAGA+GGG | 0.707493 | 8_1:-5815405 | None:intergenic |
| TCTACCGGGTAGATAGCCAG+AGG | 0.717930 | 8_1:-5815406 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACTATGAACAAATTAAA+AGG | + | chr8_1:5816363-5816382 | Msa1174670:intron | 15.0% |
| !!! | TAAGCTATTTCTATAACAAA+AGG | + | chr8_1:5814747-5814766 | Msa1174670:intron | 20.0% |
| !!! | AAATTATGTTGATTGGATTT+TGG | + | chr8_1:5814983-5815002 | Msa1174670:intron | 20.0% |
| !! | GAAATACAAATTATACATTC+CGG | - | chr8_1:5815325-5815344 | None:intergenic | 20.0% |
| !!! | TCTTTCAATATGTTAGATTT+TGG | + | chr8_1:5815496-5815515 | Msa1174670:CDS | 20.0% |
| !!! | ATCATTTTAATCGTTTCAAT+GGG | + | chr8_1:5815693-5815712 | Msa1174670:CDS | 20.0% |
| !! | TGATAAAATTGGATATGTAT+AGG | + | chr8_1:5816172-5816191 | Msa1174670:CDS | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | - | chr8_1:5816758-5816777 | None:intergenic | 20.0% |
| !! | ATTAAGTGTCTATCATATAT+GGG | - | chr8_1:5816885-5816904 | None:intergenic | 20.0% |
| !! | AATTAAGTGTCTATCATATA+TGG | - | chr8_1:5816886-5816905 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTCTATCAAAAT+AGG | + | chr8_1:5816903-5816922 | Msa1174670:intron | 20.0% |
| !!! | TTAAGTTGTCTATCAAAATA+GGG | + | chr8_1:5816904-5816923 | Msa1174670:intron | 20.0% |
| !! | TTATAGAGCTAATGATATAA+TGG | - | chr8_1:5817229-5817248 | None:intergenic | 20.0% |
| !! | TTTTAACAGTGAGGTTATAT+GGG | - | chr8_1:5813941-5813960 | None:intergenic | 25.0% |
| ! | TAATAATTCACATTCCTTTC+TGG | + | chr8_1:5814253-5814272 | Msa1174670:intron | 25.0% |
| ! | AATAATTCACATTCCTTTCT+GGG | + | chr8_1:5814254-5814273 | Msa1174670:intron | 25.0% |
| ! | CTGAATACTAAAATGTGAAA+AGG | - | chr8_1:5814307-5814326 | None:intergenic | 25.0% |
| !!! | AAATGATTTTTTGAACCTGT+CGG | + | chr8_1:5814399-5814418 | Msa1174670:intron | 25.0% |
| ! | TAAGCTGTTAAAATCAAACA+AGG | - | chr8_1:5814461-5814480 | None:intergenic | 25.0% |
| ! | GTTATGGAAATTATGTTGAT+TGG | + | chr8_1:5814976-5814995 | Msa1174670:intron | 25.0% |
| !!! | TTGATAATTCCTTGTTTCTA+CGG | - | chr8_1:5815047-5815066 | None:intergenic | 25.0% |
| !! | AACTGGAAGAAAATTTTCAT+AGG | - | chr8_1:5815438-5815457 | None:intergenic | 25.0% |
| !! | TCAATATGTTAGATTTTGGA+AGG | + | chr8_1:5815500-5815519 | Msa1174670:CDS | 25.0% |
| !!! | GATCATTTTAATCGTTTCAA+TGG | + | chr8_1:5815692-5815711 | Msa1174670:CDS | 25.0% |
| !! | TTGTACATAAAAGCATATCA+TGG | - | chr8_1:5815998-5816017 | None:intergenic | 25.0% |
| ! | TAGAAGGATGATGATAAAAT+TGG | + | chr8_1:5816161-5816180 | Msa1174670:CDS | 25.0% |
| ! | ATGATATATACAATGAGCAA+TGG | + | chr8_1:5816499-5816518 | Msa1174670:CDS | 25.0% |
| ! | ATAACAAAAGGACTTAAAGA+TGG | - | chr8_1:5816638-5816657 | None:intergenic | 25.0% |
| !!! | TTTAAGTCCTTTTGTTATCT+AGG | + | chr8_1:5816640-5816659 | Msa1174670:intron | 25.0% |
| !!! | TTAAGTCCTTTTGTTATCTA+GGG | + | chr8_1:5816641-5816660 | Msa1174670:intron | 25.0% |
| ! | AAGCTATTCTTAAGTGTTTA+TGG | - | chr8_1:5816782-5816801 | None:intergenic | 25.0% |
| !! | TTAATGCTGTTCTTTATTTC+TGG | + | chr8_1:5816997-5817016 | Msa1174670:intron | 25.0% |
| !! | AAAACCATCTATTTTACCAA+AGG | + | chr8_1:5817092-5817111 | Msa1174670:CDS | 25.0% |
| ! | AATAAGCTAGAATATAGCTA+TGG | + | chr8_1:5817193-5817212 | Msa1174670:exon | 25.0% |
| !! | TCCATGATAAAAGTATAGTT+CGG | + | chr8_1:5817385-5817404 | Msa1174670:three_prime_UTR | 25.0% |
| !! | GTTTTAACAGTGAGGTTATA+TGG | - | chr8_1:5813942-5813961 | None:intergenic | 30.0% |
| !!! | TGTTTAGTGTTTTAACAGTG+AGG | - | chr8_1:5813950-5813969 | None:intergenic | 30.0% |
| TATTACCTTATGAAAGAGTC+AGG | - | chr8_1:5814238-5814257 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCATAAGCTAACA+TGG | + | chr8_1:5814554-5814573 | Msa1174670:intron | 30.0% |
| AGCTCAAATAAGCCTATTTA+AGG | + | chr8_1:5814655-5814674 | Msa1174670:intron | 30.0% | |
| TAAGTAATTCTCATGCTAAG+TGG | + | chr8_1:5814717-5814736 | Msa1174670:intron | 30.0% | |
| TCAGTAGTTAAGCTCAAATA+TGG | + | chr8_1:5814920-5814939 | Msa1174670:intron | 30.0% | |
| TCAAATATGGCAATACAAAC+AGG | + | chr8_1:5814933-5814952 | Msa1174670:intron | 30.0% | |
| AACAAAGTAAGCGCTATTTA+GGG | - | chr8_1:5814959-5814978 | None:intergenic | 30.0% | |
| TAACAAAGTAAGCGCTATTT+AGG | - | chr8_1:5814960-5814979 | None:intergenic | 30.0% | |
| AAATAGCGCTTACTTTGTTA+TGG | + | chr8_1:5814960-5814979 | Msa1174670:intron | 30.0% | |
| ! | AATTATCAAACTTTAGCTCG+TGG | + | chr8_1:5815058-5815077 | Msa1174670:CDS | 30.0% |
| TCAAATACAACAGCTTGAAT+CGG | - | chr8_1:5815084-5815103 | None:intergenic | 30.0% | |
| ! | TTAAGGATTTGGTTGTAGAA+GGG | + | chr8_1:5815364-5815383 | Msa1174670:CDS | 30.0% |
| ATAACACTAGTGATAACACT+CGG | + | chr8_1:5815546-5815565 | Msa1174670:CDS | 30.0% | |
| AATGAAGAACACGTCTAATA+CGG | - | chr8_1:5815880-5815899 | None:intergenic | 30.0% | |
| AATTACGTTCTATGCTAACT+AGG | + | chr8_1:5816287-5816306 | Msa1174670:intron | 30.0% | |
| AACATTTCTTGATCTAGTCT+AGG | - | chr8_1:5816397-5816416 | None:intergenic | 30.0% | |
| AAACAACTTATGGACATGTT+AGG | - | chr8_1:5816748-5816767 | None:intergenic | 30.0% | |
| ATATGAACATAGAGCATAGA+TGG | - | chr8_1:5816957-5816976 | None:intergenic | 30.0% | |
| ACATCCTTTGGTAAAATAGA+TGG | - | chr8_1:5817099-5817118 | None:intergenic | 30.0% | |
| ! | ACCGAACTATACTTTTATCA+TGG | - | chr8_1:5817389-5817408 | None:intergenic | 30.0% |
| !! | ATTTTAGAGAGAGAAGGAGT+GGG | - | chr8_1:5814037-5814056 | None:intergenic | 35.0% |
| AATTGTAAGAACTGTGAGAG+GGG | - | chr8_1:5814062-5814081 | None:intergenic | 35.0% | |
| GAATTGTAAGAACTGTGAGA+GGG | - | chr8_1:5814063-5814082 | None:intergenic | 35.0% | |
| AGAATTGTAAGAACTGTGAG+AGG | - | chr8_1:5814064-5814083 | None:intergenic | 35.0% | |
| !! | AAGTTTCGCTTTTGTAGTCA+TGG | - | chr8_1:5814123-5814142 | None:intergenic | 35.0% |
| AGAGAAAGAGGTTTCATTGA+GGG | - | chr8_1:5814206-5814225 | None:intergenic | 35.0% | |
| ATGAAAGAGTCAGGAATTGA+AGG | - | chr8_1:5814229-5814248 | None:intergenic | 35.0% | |
| CAATTCCTGACTCTTTCATA+AGG | + | chr8_1:5814230-5814249 | Msa1174670:CDS | 35.0% | |
| AAAAGAGAAGAAACCCAGAA+AGG | - | chr8_1:5814270-5814289 | None:intergenic | 35.0% | |
| TGGTACAAAAAATGATAGCC+TGG | + | chr8_1:5814422-5814441 | Msa1174670:intron | 35.0% | |
| TAATCTCTTCCAAACAGTCT+TGG | + | chr8_1:5814611-5814630 | Msa1174670:intron | 35.0% | |
| ATCCAAACAGAGCCTTAAAT+AGG | - | chr8_1:5814670-5814689 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTCTCA+TGG | - | chr8_1:5814828-5814847 | None:intergenic | 35.0% | |
| AAGCATTTGTGACACTGTTT+GGG | - | chr8_1:5814897-5814916 | None:intergenic | 35.0% | |
| TAAGCATTTGTGACACTGTT+TGG | - | chr8_1:5814898-5814917 | None:intergenic | 35.0% | |
| GAATGTGACTTTATCAAACC+TGG | - | chr8_1:5815025-5815044 | None:intergenic | 35.0% | |
| TCAAGCTGTTGTATTTGAAG+TGG | + | chr8_1:5815086-5815105 | Msa1174670:CDS | 35.0% | |
| GCGATCTGAATAGATTTGAT+CGG | - | chr8_1:5815297-5815316 | None:intergenic | 35.0% | |
| TCTATTCAGATCGCAAAAAC+CGG | + | chr8_1:5815303-5815322 | Msa1174670:CDS | 35.0% | |
| ATTTCATTCACTGTGATCCA+AGG | + | chr8_1:5815340-5815359 | Msa1174670:CDS | 35.0% | |
| ! | CTTAAGGATTTGGTTGTAGA+AGG | + | chr8_1:5815363-5815382 | Msa1174670:CDS | 35.0% |
| TTTGGTTGTAGAAGGGAAAA+CGG | + | chr8_1:5815371-5815390 | Msa1174670:CDS | 35.0% | |
| GATTCCTGTTTCGCTAAATT+CGG | - | chr8_1:5815607-5815626 | None:intergenic | 35.0% | |
| AATTTAGCGAAACAGGAATC+AGG | + | chr8_1:5815607-5815626 | Msa1174670:CDS | 35.0% | |
| !! | CTTTGGAACTATCAAGAGAA+CGG | + | chr8_1:5815659-5815678 | Msa1174670:CDS | 35.0% |
| !! | TTAATCGTTTCAATGGGCTA+TGG | + | chr8_1:5815699-5815718 | Msa1174670:CDS | 35.0% |
| GCATAATCACCTTTGATGTA+AGG | - | chr8_1:5815749-5815768 | None:intergenic | 35.0% | |
| ACATCAAAGGTGATTATGCT+TGG | + | chr8_1:5815750-5815769 | Msa1174670:CDS | 35.0% | |
| CACTTCAGATGCAACAAAAA+AGG | - | chr8_1:5815781-5815800 | None:intergenic | 35.0% | |
| ! | GGGAAAAGCAAAACTTTTCT+TGG | + | chr8_1:5815842-5815861 | Msa1174670:CDS | 35.0% |
| TAGACGTGTTCTTCATTCTT+TGG | + | chr8_1:5815883-5815902 | Msa1174670:CDS | 35.0% | |
| TGCAACTTTGAATAAGCTTC+AGG | + | chr8_1:5815923-5815942 | Msa1174670:CDS | 35.0% | |
| GAATGACTCAATTCACTTTG+TGG | + | chr8_1:5816074-5816093 | Msa1174670:intron | 35.0% | |
| GATAGTTGAATCAAGCTCAT+TGG | + | chr8_1:5816319-5816338 | Msa1174670:intron | 35.0% | |
| AACTTATCGAAAGTCTACTG+CGG | - | chr8_1:5816423-5816442 | None:intergenic | 35.0% | |
| CAGCTGAAAGAAAATCAGAA+AGG | - | chr8_1:5816466-5816485 | None:intergenic | 35.0% | |
| CACCATCTCAAAATTCAACA+CGG | + | chr8_1:5816598-5816617 | Msa1174670:CDS | 35.0% | |
| !! | TACCGTGTTGAATTTTGAGA+TGG | - | chr8_1:5816603-5816622 | None:intergenic | 35.0% |
| TCAAATAAGTCGATCCAAAC+CGG | - | chr8_1:5816667-5816686 | None:intergenic | 35.0% | |
| AGACTGTTTGATAGAGCTTA+TGG | + | chr8_1:5816714-5816733 | Msa1174670:intron | 35.0% | |
| TTAACAGTGAGATACAAGTG+AGG | - | chr8_1:5816981-5817000 | None:intergenic | 35.0% | |
| TTTCCATTGTTTCCTTGTAC+TGG | - | chr8_1:5817141-5817160 | None:intergenic | 35.0% | |
| !! | TTTTAGAGAGAGAAGGAGTG+GGG | - | chr8_1:5814036-5814055 | None:intergenic | 40.0% |
| !! | CATTTTAGAGAGAGAAGGAG+TGG | - | chr8_1:5814038-5814057 | None:intergenic | 40.0% |
| !! | TTCGCTTTTGTAGTCATGGA+CGG | - | chr8_1:5814119-5814138 | None:intergenic | 40.0% |
| !! | ACAACAAAAGCGTTGCCTTT+GGG | - | chr8_1:5814151-5814170 | None:intergenic | 40.0% |
| AAATTCCTTCACTTCCTCCA+TGG | - | chr8_1:5814174-5814193 | None:intergenic | 40.0% | |
| GAGAGAAAGAGGTTTCATTG+AGG | - | chr8_1:5814207-5814226 | None:intergenic | 40.0% | |
| AGGAATTGAAGGAGAGAAAG+AGG | - | chr8_1:5814218-5814237 | None:intergenic | 40.0% | |
| !!! | TGATTTTTTGAACCTGTCGG+TGG | + | chr8_1:5814402-5814421 | Msa1174670:intron | 40.0% |
| !!! | TCATTTTTTGTACCACCGAC+AGG | - | chr8_1:5814417-5814436 | None:intergenic | 40.0% |
| CAAGGTCTAGAAACTAAACC+AGG | - | chr8_1:5814443-5814462 | None:intergenic | 40.0% | |
| TACACACTTCCAAGACTGTT+TGG | - | chr8_1:5814623-5814642 | None:intergenic | 40.0% | |
| ! | AGCCTATTTAAGGCTCTGTT+TGG | + | chr8_1:5814665-5814684 | Msa1174670:intron | 40.0% |
| ! | GGTGTTGTAATGTGAAAACC+AGG | + | chr8_1:5815004-5815023 | Msa1174670:intron | 40.0% |
| AGTCACATTCCGTAGAAACA+AGG | + | chr8_1:5815035-5815054 | Msa1174670:CDS | 40.0% | |
| GTGGAAGATAGAGAGACAAT+TGG | + | chr8_1:5815105-5815124 | Msa1174670:CDS | 40.0% | |
| GAAGATAGAGAGACAATTGG+TGG | + | chr8_1:5815108-5815127 | Msa1174670:CDS | 40.0% | |
| ! | TAGAGAGACAATTGGTGGTT+CGG | + | chr8_1:5815113-5815132 | Msa1174670:CDS | 40.0% |
| !! | AAACTTGGTGTGTGCAATGA+AGG | + | chr8_1:5815180-5815199 | Msa1174670:CDS | 40.0% |
| TGATCCAAGGCTTAAGGATT+TGG | + | chr8_1:5815353-5815372 | Msa1174670:CDS | 40.0% | |
| ACAACCAAATCCTTAAGCCT+TGG | - | chr8_1:5815360-5815379 | None:intergenic | 40.0% | |
| TTGTAGAAGGGAAAACGGTA+TGG | + | chr8_1:5815376-5815395 | Msa1174670:CDS | 40.0% | |
| !! | TTTCATAGGTGCCATTCTAC+CGG | - | chr8_1:5815424-5815443 | None:intergenic | 40.0% |
| CATATGCAAAGGACATGAAC+TGG | - | chr8_1:5815455-5815474 | None:intergenic | 40.0% | |
| ! | TCCTTTGCATATGTGTTGCT+TGG | + | chr8_1:5815462-5815481 | Msa1174670:CDS | 40.0% |
| !! | CCTTTGCATATGTGTTGCTT+GGG | + | chr8_1:5815463-5815482 | Msa1174670:CDS | 40.0% |
| !!! | ATGTGTTGCTTGGGATCTTT+TGG | + | chr8_1:5815472-5815491 | Msa1174670:CDS | 40.0% |
| AGTGTTATGCAGTTCTGCAA+TGG | - | chr8_1:5815534-5815553 | None:intergenic | 40.0% | |
| !! | GCATGTTTGAGATGGCTTTT+TGG | + | chr8_1:5815568-5815587 | Msa1174670:CDS | 40.0% |
| TATGCCGAATTTAGCGAAAC+AGG | + | chr8_1:5815600-5815619 | Msa1174670:CDS | 40.0% | |
| ! | CGTTCTCTTGATAGTTCCAA+AGG | - | chr8_1:5815661-5815680 | None:intergenic | 40.0% |
| TCAAAGGTGATTATGCTTGG+TGG | + | chr8_1:5815753-5815772 | Msa1174670:CDS | 40.0% | |
| !! | CTTGAGTTGGTAGAACATGT+CGG | + | chr8_1:5815801-5815820 | Msa1174670:CDS | 40.0% |
| CGGTGCAATAAGTGATCTTT+CGG | + | chr8_1:5815821-5815840 | Msa1174670:CDS | 40.0% | |
| GGTGCAATAAGTGATCTTTC+GGG | + | chr8_1:5815822-5815841 | Msa1174670:CDS | 40.0% | |
| ! | GAGTCATTCATCGTTTTACG+TGG | - | chr8_1:5816063-5816082 | None:intergenic | 40.0% |
| CTCTGCTTATGCAATGTAAC+AGG | + | chr8_1:5816137-5816156 | Msa1174670:intron | 40.0% | |
| ATGCAATGTAACAGGCTAGA+AGG | + | chr8_1:5816145-5816164 | Msa1174670:intron | 40.0% | |
| TAGGAAGTTCACCAATGCTT+TGG | + | chr8_1:5816191-5816210 | Msa1174670:CDS | 40.0% | |
| ATGAGCAATGGCAAAATGCT+TGG | + | chr8_1:5816511-5816530 | Msa1174670:CDS | 40.0% | |
| GTAAGACAGAACTTGCCAAA+AGG | - | chr8_1:5816547-5816566 | None:intergenic | 40.0% | |
| ACTTATTTGAGCTTATCCGC+TGG | + | chr8_1:5816677-5816696 | Msa1174670:intron | 40.0% | |
| CTCACAAATGTTTATGCCAG+CGG | - | chr8_1:5816696-5816715 | None:intergenic | 40.0% | |
| AGACCAGTACAAGGAAACAA+TGG | + | chr8_1:5817135-5817154 | Msa1174670:CDS | 40.0% | |
| CCAATCTTACAAGTAACTGC+AGG | - | chr8_1:5817363-5817382 | None:intergenic | 40.0% | |
| CCTGCAGTTACTTGTAAGAT+TGG | + | chr8_1:5817360-5817379 | Msa1174670:three_prime_UTR | 40.0% | |
| !! | GGGGACATTTTAGAGAGAGA+AGG | - | chr8_1:5814043-5814062 | None:intergenic | 45.0% |
| !! | AACAAAAGCGTTGCCTTTGG+GGG | - | chr8_1:5814149-5814168 | None:intergenic | 45.0% |
| !! | CAACAAAAGCGTTGCCTTTG+GGG | - | chr8_1:5814150-5814169 | None:intergenic | 45.0% |
| !! | GACAACAAAAGCGTTGCCTT+TGG | - | chr8_1:5814152-5814171 | None:intergenic | 45.0% |
| !! | AACGCTTTTGTTGTCCATGG+AGG | + | chr8_1:5814157-5814176 | Msa1174670:CDS | 45.0% |
| AAGCTAGCCATGAGAGCTTA+TGG | + | chr8_1:5814818-5814837 | Msa1174670:intron | 45.0% | |
| ACTGGTGATCTGGCAAAACT+TGG | + | chr8_1:5815165-5815184 | Msa1174670:CDS | 45.0% | |
| CCGAATTCACTGTAGAAGGA+CGG | - | chr8_1:5815218-5815237 | None:intergenic | 45.0% | |
| CCGTCCTTCTACAGTGAATT+CGG | + | chr8_1:5815215-5815234 | Msa1174670:CDS | 45.0% | |
| CAGTCCGAATTCACTGTAGA+AGG | - | chr8_1:5815222-5815241 | None:intergenic | 45.0% | |
| CTTCTACAGTGAATTCGGAC+TGG | + | chr8_1:5815220-5815239 | Msa1174670:CDS | 45.0% | |
| TCACTGTGATCCAAGGCTTA+AGG | + | chr8_1:5815347-5815366 | Msa1174670:CDS | 45.0% | |
| !! | TTCATAGGTGCCATTCTACC+GGG | - | chr8_1:5815423-5815442 | None:intergenic | 45.0% |
| CCCAAGCAACACATATGCAA+AGG | - | chr8_1:5815466-5815485 | None:intergenic | 45.0% | |
| AACACTCGGCATGTTTGAGA+TGG | + | chr8_1:5815560-5815579 | Msa1174670:CDS | 45.0% | |
| AAACAGGAATCAGGCCAACT+GGG | + | chr8_1:5815616-5815635 | Msa1174670:CDS | 45.0% | |
| ACTGTATGGGCAGTTACCTT+TGG | + | chr8_1:5815642-5815661 | Msa1174670:CDS | 45.0% | |
| TCTTGGAGGCCTTACATCAA+AGG | + | chr8_1:5815737-5815756 | Msa1174670:CDS | 45.0% | |
| ! | TGCATCTGAAGTGCTTGAGT+TGG | + | chr8_1:5815788-5815807 | Msa1174670:CDS | 45.0% |
| GCTTCAGGTATTTATCCGCA+AGG | + | chr8_1:5815938-5815957 | Msa1174670:intron | 45.0% | |
| ! | AGCGTGATATGATAGCCTTG+CGG | - | chr8_1:5815956-5815975 | None:intergenic | 45.0% |
| AGTAGCTGTGGTTGTATCTG+TGG | + | chr8_1:5816215-5816234 | Msa1174670:CDS | 45.0% | |
| GTAGCTGTGGTTGTATCTGT+GGG | + | chr8_1:5816216-5816235 | Msa1174670:CDS | 45.0% | |
| TGTGGGATGGATATGCTATG+AGG | + | chr8_1:5816233-5816252 | Msa1174670:CDS | 45.0% | |
| ACAGAACTTGCCAAAAGGCT+GGG | - | chr8_1:5816542-5816561 | None:intergenic | 45.0% | |
| TGTGTGTCATCTGTGTTGTC+TGG | + | chr8_1:5816574-5816593 | Msa1174670:CDS | 45.0% | |
| GTGTGTCATCTGTGTTGTCT+GGG | + | chr8_1:5816575-5816594 | Msa1174670:CDS | 45.0% | |
| !! | GTCCTTTTGTTATCTAGGGC+CGG | + | chr8_1:5816645-5816664 | Msa1174670:intron | 45.0% |
| AACCGGCCCTAGATAACAAA+AGG | - | chr8_1:5816650-5816669 | None:intergenic | 45.0% | |
| ! | TTTGTTATCTAGGGCCGGTT+TGG | + | chr8_1:5816650-5816669 | Msa1174670:intron | 45.0% |
| ! | AAAGCTCGTCTTGTTACTGC+AGG | - | chr8_1:5816933-5816952 | None:intergenic | 45.0% |
| AGATATGCTTACCGTGACGA+TGG | + | chr8_1:5817027-5817046 | Msa1174670:intron | 45.0% | |
| GATATGCTTACCGTGACGAT+GGG | + | chr8_1:5817028-5817047 | Msa1174670:intron | 45.0% | |
| ACCAAAGGATGTTAGTGTGC+CGG | + | chr8_1:5817107-5817126 | Msa1174670:CDS | 45.0% | |
| CATGTATGCATGCATGCACA+TGG | - | chr8_1:5817470-5817489 | None:intergenic | 45.0% | |
| TGCATGCATGCATACATGTG+AGG | + | chr8_1:5817472-5817491 | Msa1174670:three_prime_UTR | 45.0% | |
| !! | ATAAAATAAAATAAACTAAA+AGG | - | chr8_1:5817291-5817310 | None:intergenic | 5.0% |
| AGCGAAACTTTCTCCCCCAA+AGG | + | chr8_1:5814133-5814152 | Msa1174670:CDS | 50.0% | |
| !! | GGCAACGCTTTTGTTGTCCA+TGG | + | chr8_1:5814154-5814173 | Msa1174670:CDS | 50.0% |
| GTTGTCCATGGAGGAAGTGA+AGG | + | chr8_1:5814166-5814185 | Msa1174670:CDS | 50.0% | |
| ! | ACAATTGGTGGTTCGGCCTA+TGG | + | chr8_1:5815120-5815139 | Msa1174670:CDS | 50.0% |
| TTCGGCCTATGGAGGTCAAA+GGG | + | chr8_1:5815131-5815150 | Msa1174670:CDS | 50.0% | |
| ! | TGTCTGTTGCACTGGTGATC+TGG | + | chr8_1:5815155-5815174 | Msa1174670:CDS | 50.0% |
| TGGTGTGTGCAATGAAGGAC+AGG | + | chr8_1:5815185-5815204 | Msa1174670:CDS | 50.0% | |
| !!! | TCGGACTGGCCTCAAGTTTT+CGG | + | chr8_1:5815234-5815253 | Msa1174670:CDS | 50.0% |
| ACGGTATGGAAGAATCCCTC+TGG | + | chr8_1:5815390-5815409 | Msa1174670:CDS | 50.0% | |
| AATCCCTCTGGCTATCTACC+CGG | + | chr8_1:5815402-5815421 | Msa1174670:CDS | 50.0% | |
| TGGCTATCTACCCGGTAGAA+TGG | + | chr8_1:5815410-5815429 | Msa1174670:CDS | 50.0% | |
| GAAACAGGAATCAGGCCAAC+TGG | + | chr8_1:5815615-5815634 | Msa1174670:CDS | 50.0% | |
| GCCAACTGGGACAACTGTAT+GGG | + | chr8_1:5815629-5815648 | Msa1174670:CDS | 50.0% | |
| CTATCAAGAGAACGGTTGCG+AGG | + | chr8_1:5815667-5815686 | Msa1174670:CDS | 50.0% | |
| ! | GGTGTTGTGAGACCTACTCT+TGG | + | chr8_1:5815720-5815739 | Msa1174670:CDS | 50.0% |
| GTTGTGAGACCTACTCTTGG+AGG | + | chr8_1:5815723-5815742 | Msa1174670:CDS | 50.0% | |
| GATGTAAGGCCTCCAAGAGT+AGG | - | chr8_1:5815735-5815754 | None:intergenic | 50.0% | |
| AACACGTCTAATACGGCAGC+AGG | - | chr8_1:5815873-5815892 | None:intergenic | 50.0% | |
| CACAGCTACTGCCAAAGCAT+TGG | - | chr8_1:5816205-5816224 | None:intergenic | 50.0% | |
| CAATGCTTTGGCAGTAGCTG+TGG | + | chr8_1:5816203-5816222 | Msa1174670:CDS | 50.0% | |
| CTGTGGTTGTATCTGTGGGA+TGG | + | chr8_1:5816220-5816239 | Msa1174670:CDS | 50.0% | |
| ! | CTTGGATCATCCCAGCCTTT+TGG | + | chr8_1:5816529-5816548 | Msa1174670:CDS | 50.0% |
| GACAGAACTTGCCAAAAGGC+TGG | - | chr8_1:5816543-5816562 | None:intergenic | 50.0% | |
| ATGGGAGCGAAGAGTTCGAT+AGG | + | chr8_1:5817046-5817065 | Msa1174670:CDS | 50.0% | |
| TGGGAGCGAAGAGTTCGATA+GGG | + | chr8_1:5817047-5817066 | Msa1174670:CDS | 50.0% | |
| TCCGGCACACTAACATCCTT+TGG | - | chr8_1:5817111-5817130 | None:intergenic | 50.0% | |
| ! | CCTTGTACTGGTCTAGCATC+CGG | - | chr8_1:5817129-5817148 | None:intergenic | 50.0% |
| ! | ATTGGTGGTTCGGCCTATGG+AGG | + | chr8_1:5815123-5815142 | Msa1174670:CDS | 55.0% |
| GTTCGGCCTATGGAGGTCAA+AGG | + | chr8_1:5815130-5815149 | Msa1174670:CDS | 55.0% | |
| GACAGCCCTTTGACCTCCAT+AGG | - | chr8_1:5815139-5815158 | None:intergenic | 55.0% | |
| CAAAGGGCTGTCTGTTGCAC+TGG | + | chr8_1:5815147-5815166 | Msa1174670:CDS | 55.0% | |
| AACGCGACGCCGAAAACTTG+AGG | - | chr8_1:5815246-5815265 | None:intergenic | 55.0% | |
| CTACCGGGTAGATAGCCAGA+GGG | - | chr8_1:5815408-5815427 | None:intergenic | 55.0% | |
| TCTACCGGGTAGATAGCCAG+AGG | - | chr8_1:5815409-5815428 | None:intergenic | 55.0% | |
| GGCCAACTGGGACAACTGTA+TGG | + | chr8_1:5815628-5815647 | Msa1174670:CDS | 55.0% | |
| GCCCATACAGTTGTCCCAGT+TGG | - | chr8_1:5815633-5815652 | None:intergenic | 55.0% | |
| ACTCTTCGCTCCCATCGTCA+CGG | - | chr8_1:5817041-5817060 | None:intergenic | 55.0% | |
| CCGGATGCTAGACCAGTACA+AGG | + | chr8_1:5817126-5817145 | Msa1174670:CDS | 55.0% | |
| AGGAGTGGGGTGTGGATCTG+TGG | - | chr8_1:5814023-5814042 | None:intergenic | 60.0% | |
| GAGAGAGAAGGAGTGGGGTG+TGG | - | chr8_1:5814031-5814050 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 5813925 | 5817495 | 5813925 | ID=Msa1174670;Name=Msa1174670 |
| chr8_1 | mRNA | 5813925 | 5817495 | 5813925 | ID=Msa1174670-mRNA-1;Parent=Msa1174670;Name=Msa1174670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=130|1|1|1|1|1|5|298|505 |
| chr8_1 | exon | 5813925 | 5814251 | 5813925 | ID=Msa1174670-mRNA-1:exon:1944;Parent=Msa1174670-mRNA-1 |
| chr8_1 | exon | 5815026 | 5815944 | 5815026 | ID=Msa1174670-mRNA-1:exon:1945;Parent=Msa1174670-mRNA-1 |
| chr8_1 | exon | 5816159 | 5816254 | 5816159 | ID=Msa1174670-mRNA-1:exon:1946;Parent=Msa1174670-mRNA-1 |
| chr8_1 | exon | 5816483 | 5816619 | 5816483 | ID=Msa1174670-mRNA-1:exon:1947;Parent=Msa1174670-mRNA-1 |
| chr8_1 | exon | 5817029 | 5817495 | 5817029 | ID=Msa1174670-mRNA-1:exon:1948;Parent=Msa1174670-mRNA-1 |
| chr8_1 | five_prime_UTR | 5813925 | 5814054 | 5813925 | ID=Msa1174670-mRNA-1:five_prime_utr;Parent=Msa1174670-mRNA-1 |
| chr8_1 | CDS | 5814055 | 5814251 | 5814055 | ID=Msa1174670-mRNA-1:cds;Parent=Msa1174670-mRNA-1 |
| chr8_1 | CDS | 5815026 | 5815944 | 5815026 | ID=Msa1174670-mRNA-1:cds;Parent=Msa1174670-mRNA-1 |
| chr8_1 | CDS | 5816159 | 5816254 | 5816159 | ID=Msa1174670-mRNA-1:cds;Parent=Msa1174670-mRNA-1 |
| chr8_1 | CDS | 5816483 | 5816619 | 5816483 | ID=Msa1174670-mRNA-1:cds;Parent=Msa1174670-mRNA-1 |
| chr8_1 | CDS | 5817029 | 5817197 | 5817029 | ID=Msa1174670-mRNA-1:cds;Parent=Msa1174670-mRNA-1 |
| chr8_1 | three_prime_UTR | 5817198 | 5817495 | 5817198 | ID=Msa1174670-mRNA-1:three_prime_utr;Parent=Msa1174670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
