Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0552570 | XP_013456535.1 | 99.118 | 567 | 5 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0552570 | sp|P93472|DIM_PEA | 93.827 | 567 | 35 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0552570 | A0A072UME9 | 99.118 | 567 | 5 | 0 | 1 | 567 | 1 | 567 | 0.0 | 1172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0552570 | 0.829885 | 4.006495e-55 | -8.615850e-47 |
| Msa0045620 | Msa0552570 | 0.823095 | 1.665603e-53 | -8.615850e-47 |
| Msa0050530 | Msa0552570 | 0.829041 | 6.426502e-55 | -8.615850e-47 |
| Msa0080440 | Msa0552570 | 0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa0091350 | Msa0552570 | 0.807448 | 5.029652e-50 | -8.615850e-47 |
| Msa0100600 | Msa0552570 | 0.826003 | 3.443295e-54 | -8.615850e-47 |
| Msa0100890 | Msa0552570 | 0.825924 | 3.595304e-54 | -8.615850e-47 |
| Msa0197050 | Msa0552570 | 0.806108 | 9.654520e-50 | -8.615850e-47 |
| Msa0204970 | Msa0552570 | 0.809628 | 1.722281e-50 | -8.615850e-47 |
| Msa0221180 | Msa0552570 | 0.804692 | 1.911856e-49 | -8.615850e-47 |
| Msa0368920 | Msa0552570 | 0.807662 | 4.530286e-50 | -8.615850e-47 |
| Msa0388250 | Msa0552570 | 0.817343 | 3.463202e-52 | -8.615850e-47 |
| Msa0416210 | Msa0552570 | 0.803483 | 3.411460e-49 | -8.615850e-47 |
| Msa0420430 | Msa0552570 | 0.804297 | 2.311273e-49 | -8.615850e-47 |
| Msa0433630 | Msa0552570 | 0.817970 | 2.501590e-52 | -8.615850e-47 |
| Msa0434360 | Msa0552570 | 0.804170 | 2.456953e-49 | -8.615850e-47 |
| Msa0469430 | Msa0552570 | 0.819112 | 1.378137e-52 | -8.615850e-47 |
| Msa0477480 | Msa0552570 | 0.813638 | 2.313582e-51 | -8.615850e-47 |
| Msa0249870 | Msa0552570 | 0.826351 | 2.845982e-54 | -8.615850e-47 |
| Msa0276730 | Msa0552570 | 0.811427 | 7.041122e-51 | -8.615850e-47 |
| Msa0278840 | Msa0552570 | 0.806277 | 8.895959e-50 | -8.615850e-47 |
| Msa0281540 | Msa0552570 | 0.806182 | 9.313941e-50 | -8.615850e-47 |
| Msa0316630 | Msa0552570 | 0.811182 | 7.955480e-51 | -8.615850e-47 |
| Msa0320580 | Msa0552570 | 0.805523 | 1.281207e-49 | -8.615850e-47 |
| Msa0344110 | Msa0552570 | 0.807322 | 5.350129e-50 | -8.615850e-47 |
| Msa0515110 | Msa0552570 | 0.835230 | 1.893473e-56 | -8.615850e-47 |
| Msa0521510 | Msa0552570 | 0.814223 | 1.718666e-51 | -8.615850e-47 |
| Msa0521530 | Msa0552570 | 0.817948 | 2.530711e-52 | -8.615850e-47 |
| Msa0527850 | Msa0552570 | 0.800908 | 1.155843e-48 | -8.615850e-47 |
| Msa0530660 | Msa0552570 | 0.816027 | 6.834281e-52 | -8.615850e-47 |
| Msa0536410 | Msa0552570 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
| Msa0552570 | Msa0556620 | 0.802435 | 5.617278e-49 | -8.615850e-47 |
| Msa0552570 | Msa0571350 | 0.812254 | 4.650434e-51 | -8.615850e-47 |
| Msa0552570 | Msa0572830 | 0.814288 | 1.663074e-51 | -8.615850e-47 |
| Msa0552570 | Msa0574660 | 0.823127 | 1.637177e-53 | -8.615850e-47 |
| Msa0552570 | Msa0576330 | 0.831254 | 1.852487e-55 | -8.615850e-47 |
| Msa0552570 | Msa0580940 | 0.816275 | 6.012981e-52 | -8.615850e-47 |
| Msa0552570 | Msa0580990 | 0.813992 | 1.932753e-51 | -8.615850e-47 |
| Msa0552570 | Msa0587180 | 0.814239 | 1.704444e-51 | -8.615850e-47 |
| Msa0552570 | Msa0592510 | 0.809469 | 1.863071e-50 | -8.615850e-47 |
| Msa0552570 | Msa0623310 | 0.803250 | 3.812478e-49 | -8.615850e-47 |
| Msa0552570 | Msa0626980 | 0.809897 | 1.507890e-50 | -8.615850e-47 |
| Msa0552570 | Msa0627360 | 0.812135 | 4.936634e-51 | -8.615850e-47 |
| Msa0552570 | Msa0655710 | 0.802828 | 4.660472e-49 | -8.615850e-47 |
| Msa0552570 | Msa0673940 | 0.810616 | 1.055042e-50 | -8.615850e-47 |
| Msa0552570 | Msa0687370 | 0.884184 | 2.381244e-71 | -8.615850e-47 |
| Msa0552570 | Msa0688620 | 0.805046 | 1.612449e-49 | -8.615850e-47 |
| Msa0552570 | Msa0695560 | 0.802415 | 5.671279e-49 | -8.615850e-47 |
| Msa0552570 | Msa0714360 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0552570 | Msa0749190 | 0.811314 | 7.447707e-51 | -8.615850e-47 |
| Msa0552570 | Msa0750520 | 0.809741 | 1.629099e-50 | -8.615850e-47 |
| Msa0552570 | Msa0751720 | 0.829191 | 5.911266e-55 | -8.615850e-47 |
| Msa0552570 | Msa0764770 | 0.802281 | 6.042769e-49 | -8.615850e-47 |
| Msa0552570 | Msa0831820 | 0.832207 | 1.078162e-55 | -8.615850e-47 |
| Msa0552570 | Msa0846900 | 0.809430 | 1.899370e-50 | -8.615850e-47 |
| Msa0552570 | Msa0925330 | 0.800906 | 1.156721e-48 | -8.615850e-47 |
| Msa0552570 | Msa0926760 | 0.818151 | 2.276119e-52 | -8.615850e-47 |
| Msa0552570 | Msa0929900 | 0.831135 | 1.981550e-55 | -8.615850e-47 |
| Msa0552570 | Msa1008850 | 0.866197 | 3.400775e-65 | -8.615850e-47 |
| Msa0552570 | Msa1021560 | 0.834702 | 2.573287e-56 | -8.615850e-47 |
| Msa0552570 | Msa1050260 | 0.841510 | 4.549357e-58 | -8.615850e-47 |
| Msa0552570 | Msa1071410 | 0.808165 | 3.541359e-50 | -8.615850e-47 |
| Msa0552570 | Msa1085680 | 0.824520 | 7.722293e-54 | -8.615850e-47 |
| Msa0552570 | Msa1105540 | 0.843811 | 1.113571e-58 | -8.615850e-47 |
| Msa0552570 | Msa1105580 | 0.823362 | 1.443099e-53 | -8.615850e-47 |
| Msa0552570 | Msa1106220 | 0.803452 | 3.463194e-49 | -8.615850e-47 |
| Msa0552570 | Msa1138800 | 0.845339 | 4.320634e-59 | -8.615850e-47 |
| Msa0552570 | Msa1144990 | 0.808781 | 2.616549e-50 | -8.615850e-47 |
| Msa0552570 | Msa1148930 | 0.816865 | 4.435564e-52 | -8.615850e-47 |
| Msa0552570 | Msa1180840 | 0.846742 | 1.794397e-59 | -8.615850e-47 |
| Msa0552570 | Msa1212700 | 0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa0552570 | Msa1212920 | 0.854727 | 1.015409e-61 | -8.615850e-47 |
| Msa0552570 | Msa1231490 | 0.825557 | 4.393661e-54 | -8.615850e-47 |
| Msa0552570 | Msa1236150 | 0.832166 | 1.103805e-55 | -8.615850e-47 |
| Msa0552570 | Msa1240940 | 0.815813 | 7.628758e-52 | -8.615850e-47 |
| Msa0552570 | Msa1278030 | 0.826565 | 2.530618e-54 | -8.615850e-47 |
| Msa0552570 | Msa1282300 | 0.821051 | 4.958135e-53 | -8.615850e-47 |
| Msa0552570 | Msa1294790 | 0.814188 | 1.749670e-51 | -8.615850e-47 |
| Msa0552570 | Msa1299980 | 0.814590 | 1.425605e-51 | -8.615850e-47 |
| Msa0552570 | Msa1301980 | 0.827023 | 1.966452e-54 | -8.615850e-47 |
| Msa0552570 | Msa1331650 | 0.856503 | 3.079830e-62 | -8.615850e-47 |
| Msa0552570 | Msa1368170 | 0.893622 | 5.292775e-75 | -8.615850e-47 |
| Msa0552570 | Msa1371800 | 0.818774 | 1.644771e-52 | -8.615850e-47 |
| Msa0552570 | Msa1372030 | 0.817680 | 2.908990e-52 | -8.615850e-47 |
| Msa0552570 | Msa1376310 | 0.823079 | 1.680326e-53 | -8.615850e-47 |
| Msa0552570 | Msa1381800 | 0.804060 | 2.589377e-49 | -8.615850e-47 |
| Msa0552570 | Msa1385570 | 0.891368 | 4.234038e-74 | -8.615850e-47 |
| Msa0552570 | Msa1389310 | 0.806091 | 9.731427e-50 | -8.615850e-47 |
| Msa0552570 | Msa1389820 | 0.808547 | 2.936012e-50 | -8.615850e-47 |
| Msa0552570 | Msa1393850 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0552570 | Msa1408160 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
| Msa0552570 | Msa1420830 | 0.820594 | 6.315723e-53 | -8.615850e-47 |
| Msa0552570 | Msa1448960 | 0.817996 | 2.467958e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0552570 | MtrunA17_Chr4g0037811 | 99.670 | 303 | 1 | 0 | 265 | 567 | 143 | 445 | 0.0 | 645 |
| Msa0552570 | MtrunA17_Chr4g0037811 | 98.592 | 142 | 2 | 0 | 1 | 142 | 1 | 142 | 3.35e-92 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0552570 | AT3G19820.2 | 79.965 | 564 | 109 | 2 | 1 | 563 | 1 | 561 | 0.0 | 955 |
| Msa0552570 | AT3G19820.1 | 79.965 | 564 | 109 | 2 | 1 | 563 | 1 | 561 | 0.0 | 955 |
| Msa0552570 | AT3G19820.3 | 79.965 | 564 | 109 | 2 | 1 | 563 | 1 | 561 | 0.0 | 955 |
Find 211 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTGATCTTTCTGCTTTC+AGG | 0.122233 | 4_1:+49247362 | Msa0552570:CDS |
| TAACTTCATGTACTCCTTAA+TGG | 0.180078 | 4_1:-49247728 | None:intergenic |
| ATGCCTGTGCAATATCTTTC+AGG | 0.192669 | 4_1:-49247774 | None:intergenic |
| GCATCTATAAAGTTCCTTTC+TGG | 0.204155 | 4_1:-49249455 | None:intergenic |
| ATTGTCCTGGTCCCCATCTC+TGG | 0.205729 | 4_1:-49247815 | None:intergenic |
| TATCTTATTCCCCTTCTTCT+TGG | 0.210815 | 4_1:-49247929 | None:intergenic |
| TGCAGCTCAAAGCCTGCTTC+TGG | 0.232581 | 4_1:-49248743 | None:intergenic |
| GGTACCAACAACTGGTTTAT+AGG | 0.242029 | 4_1:-49247752 | None:intergenic |
| TTGCTGATCAATGGTGGTTT+AGG | 0.262363 | 4_1:+49248103 | Msa0552570:CDS |
| TGAAATTCTGATTTATTTGA+TGG | 0.291585 | 4_1:+49249138 | Msa0552570:three_prime_UTR |
| ACCCAAATCTTCTTCCTCTT+AGG | 0.291716 | 4_1:-49247067 | None:intergenic |
| ACCGTTGGTGGCCTCATAAA+TGG | 0.294869 | 4_1:+49247514 | Msa0552570:CDS |
| TTCCTTCTGCCGCGTCTTGA+AGG | 0.306504 | 4_1:-49247200 | None:intergenic |
| GATCAAGCTTATACCCATTA+AGG | 0.307946 | 4_1:+49247714 | Msa0552570:CDS |
| GCCCTAAGAGGAAGAAGATT+TGG | 0.321771 | 4_1:+49247065 | Msa0552570:CDS |
| AGCTTCACGCACCTCCTTCT+CGG | 0.323950 | 4_1:-49249059 | None:intergenic |
| GTTTGGATGGACACAGGTTT+AGG | 0.338810 | 4_1:+49249410 | Msa0552570:three_prime_UTR |
| AAAATAAAGTGTGAAGGAAA+TGG | 0.340562 | 4_1:-49247140 | None:intergenic |
| AACTTCATGTACTCCTTAAT+GGG | 0.343574 | 4_1:-49247727 | None:intergenic |
| GAAGGAAGTTCCCACAAATA+TGG | 0.349276 | 4_1:+49247547 | Msa0552570:CDS |
| AACTGAATGAGAAAAGCTTC+TGG | 0.349335 | 4_1:+49248936 | Msa0552570:CDS |
| CAAGTTGCCGGTCAAAACTA+TGG | 0.350660 | 4_1:+49248715 | Msa0552570:CDS |
| CTTTCTGGCAAAGGATCGTT+TGG | 0.351471 | 4_1:-49249440 | None:intergenic |
| TTAACCGTTTGAGACTGATA+TGG | 0.358527 | 4_1:+49249306 | Msa0552570:three_prime_UTR |
| ATGCACCAGGTCCTGTGTTA+AGG | 0.363892 | 4_1:+49248822 | Msa0552570:CDS |
| CTGGTCTATATGAGCATTGT+AGG | 0.368765 | 4_1:+49248972 | Msa0552570:CDS |
| CAGGCTTTGAGCTGCAACGC+AGG | 0.375137 | 4_1:+49248750 | Msa0552570:CDS |
| TTACGCTATTCCGTGGTCTC+AGG | 0.376933 | 4_1:+49247663 | Msa0552570:CDS |
| CCCTAAGAGGAAGAAGATTT+GGG | 0.379452 | 4_1:+49247066 | Msa0552570:CDS |
| CCGTGGTCTCAGGGAACACT+TGG | 0.380984 | 4_1:+49247673 | Msa0552570:CDS |
| GAGCATTGTAGGAGGAAGTA+TGG | 0.383337 | 4_1:+49248983 | Msa0552570:CDS |
| TGTGGCCTTCGAAATTGTTC+TGG | 0.388234 | 4_1:+49247588 | Msa0552570:CDS |
| TTAAGGGGTGAGGTGTTTGA+TGG | 0.390138 | 4_1:+49248839 | Msa0552570:CDS |
| ACGGTTAAAATCACCATGTT+AGG | 0.390218 | 4_1:-49249291 | None:intergenic |
| TGAGAAATGTTGACTATAAG+AGG | 0.392610 | 4_1:+49247326 | Msa0552570:CDS |
| ACTTGCTGTGGTTGCTGAGC+TGG | 0.394165 | 4_1:+49247483 | Msa0552570:CDS |
| TGCACCAGGTCCTGTGTTAA+GGG | 0.394470 | 4_1:+49248823 | Msa0552570:CDS |
| CCCAAATCTTCTTCCTCTTA+GGG | 0.403561 | 4_1:-49247066 | None:intergenic |
| CCTGGATAACATGCATTTCA+TGG | 0.407151 | 4_1:-49248203 | None:intergenic |
| GGCACACAAGATGTTTGTAT+TGG | 0.410878 | 4_1:+49248058 | Msa0552570:CDS |
| CTTTGAGCTGCAACGCAGGC+AGG | 0.413552 | 4_1:+49248754 | Msa0552570:CDS |
| ACAATGCATATCCCCATGTT+TGG | 0.415530 | 4_1:+49249393 | Msa0552570:three_prime_UTR |
| ACAGCAAGTGCGAGATTCAT+AGG | 0.423572 | 4_1:-49247469 | None:intergenic |
| CAAACGATCCTTTGCCAGAA+AGG | 0.424662 | 4_1:+49249441 | Msa0552570:three_prime_UTR |
| TCCTCCCATTTGCTGATCAA+TGG | 0.428047 | 4_1:+49248094 | Msa0552570:CDS |
| GATGGACACAGGTTTAGGTT+TGG | 0.429640 | 4_1:+49249415 | Msa0552570:three_prime_UTR |
| ATAAATGGTTACGGGATAGA+AGG | 0.430522 | 4_1:+49247529 | Msa0552570:CDS |
| GGTTTAGGTTTCTGTTTGGC+TGG | 0.432107 | 4_1:+49248118 | Msa0552570:CDS |
| GCACACAAGATGTTTGTATT+GGG | 0.432787 | 4_1:+49248059 | Msa0552570:CDS |
| AAGGAACTTTATAGATGCAT+TGG | 0.433745 | 4_1:+49249460 | Msa0552570:three_prime_UTR |
| TCTTTCAGGGTACCAACAAC+TGG | 0.438314 | 4_1:-49247760 | None:intergenic |
| CTATCCCGTAACCATTTATG+AGG | 0.442459 | 4_1:-49247525 | None:intergenic |
| CTGTGCGTAGATTGGAGAAC+TGG | 0.442494 | 4_1:+49248870 | Msa0552570:CDS |
| AAATAAAGTGTGAAGGAAAT+GGG | 0.442624 | 4_1:-49247139 | None:intergenic |
| CCATGAAATGCATGTTATCC+AGG | 0.442794 | 4_1:+49248203 | Msa0552570:CDS |
| CTCTGCATGTTGGTAGAACC+AGG | 0.442971 | 4_1:-49247977 | None:intergenic |
| TGCATATGCAGTTTCAAGGT+GGG | 0.443614 | 4_1:-49249089 | None:intergenic |
| TTCGAAATTGTTCTGGCAGA+TGG | 0.443717 | 4_1:+49247595 | Msa0552570:CDS |
| AACCACCATTGATCAGCAAA+TGG | 0.447819 | 4_1:-49248099 | None:intergenic |
| GCCTTGAGCAGAGAAACCTT+GGG | 0.447957 | 4_1:-49248150 | None:intergenic |
| ATCATAGTTTCAACGAAGTC+GGG | 0.449537 | 4_1:-49247850 | None:intergenic |
| GCAGACAAGGCCATCCTTTG+AGG | 0.452680 | 4_1:-49247272 | None:intergenic |
| TGCCTTGAGCAGAGAAACCT+TGG | 0.460485 | 4_1:-49248151 | None:intergenic |
| GGTGGCCTCATAAATGGTTA+CGG | 0.461286 | 4_1:+49247520 | Msa0552570:CDS |
| CGTAAGCCGTGGATCGCTGT+TGG | 0.463167 | 4_1:+49247301 | Msa0552570:CDS |
| GTGGCCTCATAAATGGTTAC+GGG | 0.464437 | 4_1:+49247521 | Msa0552570:CDS |
| AGGAACTTTATAGATGCATT+GGG | 0.465996 | 4_1:+49249461 | Msa0552570:three_prime_UTR |
| CTTCTGCATATGCAGTTTCA+AGG | 0.467078 | 4_1:-49249093 | None:intergenic |
| CGGAAAAGAGGCCATATTTG+TGG | 0.470653 | 4_1:-49247558 | None:intergenic |
| TTGTCCTGGTCCCCATCTCT+GGG | 0.472488 | 4_1:-49247814 | None:intergenic |
| ACACAAACTGTACAAGTTGC+CGG | 0.473436 | 4_1:+49248703 | Msa0552570:CDS |
| GTAAGCCGTGGATCGCTGTT+GGG | 0.474322 | 4_1:+49247302 | Msa0552570:CDS |
| TTAACCTATAAACCAGTTGT+TGG | 0.474861 | 4_1:+49247748 | Msa0552570:CDS |
| TGCAGATGCTGTGCGTAGAT+TGG | 0.477605 | 4_1:+49248862 | Msa0552570:CDS |
| AGGTGGGAGATGCACTAGAA+TGG | 0.479151 | 4_1:+49248247 | Msa0552570:CDS |
| GCAGCTCAAAGCCTGCTTCT+GGG | 0.480253 | 4_1:-49248742 | None:intergenic |
| TCTTCTTCCTCTTAGGGCGC+AGG | 0.481487 | 4_1:-49247060 | None:intergenic |
| TTCTGGAGGATGTTTGATGC+TGG | 0.485214 | 4_1:+49248953 | Msa0552570:CDS |
| AGAATTTCAAATCAGTCTGC+TGG | 0.485554 | 4_1:-49249124 | None:intergenic |
| TTGCAGTGATAGTGAGCTGC+TGG | 0.485738 | 4_1:-49245937 | None:intergenic |
| TGGTGGTTTAGGTTTCTGTT+TGG | 0.486503 | 4_1:+49248114 | Msa0552570:CDS |
| ACACGAGCTGTATGCATGAC+GGG | 0.486804 | 4_1:+49247883 | Msa0552570:CDS |
| GCTCAAATGTTCACAGATGT+TGG | 0.489438 | 4_1:+49248791 | Msa0552570:CDS |
| AGAATGGGTTGACCGTGAAA+TGG | 0.491720 | 4_1:+49248263 | Msa0552570:CDS |
| CCAAGTGTTCCCTGAGACCA+CGG | 0.493362 | 4_1:-49247673 | None:intergenic |
| TGCTCCCAGAGATGGGGACC+AGG | 0.494088 | 4_1:+49247810 | Msa0552570:CDS |
| ATAAAGTTCCTTTCTGGCAA+AGG | 0.498865 | 4_1:-49249449 | None:intergenic |
| AGGCTCCCCTGCGCCCTAAG+AGG | 0.499822 | 4_1:+49247053 | Msa0552570:CDS |
| AATCATAGTTTCAACGAAGT+CGG | 0.503377 | 4_1:-49247851 | None:intergenic |
| GAAAGAAGAGGCCAAGAAGA+AGG | 0.504062 | 4_1:+49247918 | Msa0552570:CDS |
| TGTGTACTACAAATCAAAGA+AGG | 0.504519 | 4_1:+49249027 | Msa0552570:CDS |
| AGGTCCTGTGTTAAGGGGTG+AGG | 0.504591 | 4_1:+49248829 | Msa0552570:CDS |
| GGTAGAGCCCCTTGTCAACA+TGG | 0.505052 | 4_1:+49247423 | Msa0552570:CDS |
| TACGCTATTCCGTGGTCTCA+GGG | 0.506036 | 4_1:+49247664 | Msa0552570:CDS |
| GAACCTTCTCATCATTGTCC+TGG | 0.510778 | 4_1:-49247828 | None:intergenic |
| GGAAAAGAGGCCATATTTGT+GGG | 0.513523 | 4_1:-49247557 | None:intergenic |
| CTGGACGATCTTACCGTTGG+TGG | 0.514224 | 4_1:+49247502 | Msa0552570:CDS |
| AGAGTACTCATTGTCCTTGG+TGG | 0.515091 | 4_1:-49247632 | None:intergenic |
| CAGACAAGGCCATCCTTTGA+GGG | 0.518053 | 4_1:-49247271 | None:intergenic |
| GGTGGGAGATGCACTAGAAT+GGG | 0.518452 | 4_1:+49248248 | Msa0552570:CDS |
| AGGAGGAAGTATGGAGCTGT+TGG | 0.519209 | 4_1:+49248992 | Msa0552570:CDS |
| AACCTGTGTCCATCCAAACA+TGG | 0.520158 | 4_1:-49249406 | None:intergenic |
| TGCCTGTGCAATATCTTTCA+GGG | 0.520680 | 4_1:-49247773 | None:intergenic |
| CTTCTTCCTCTTAGGGCGCA+GGG | 0.523602 | 4_1:-49247059 | None:intergenic |
| ACAAAGAGAGAATGATTGCT+AGG | 0.523767 | 4_1:+49247401 | Msa0552570:CDS |
| CCACAACAGCATCGGAAAAG+AGG | 0.524180 | 4_1:-49247570 | None:intergenic |
| CCCCAAGGTTTCTCTGCTCA+AGG | 0.527182 | 4_1:+49248149 | Msa0552570:CDS |
| ATCAGAGTACTCATTGTCCT+TGG | 0.528456 | 4_1:-49247635 | None:intergenic |
| TCCCATTTGCTGATCAATGG+TGG | 0.530260 | 4_1:+49248097 | Msa0552570:CDS |
| CATACTTGTTCCATTGTACA+AGG | 0.532528 | 4_1:+49248227 | Msa0552570:CDS |
| CACAAGATGTTTGTATTGGG+AGG | 0.533101 | 4_1:+49248062 | Msa0552570:CDS |
| TTTGAGCTGCAACGCAGGCA+GGG | 0.534260 | 4_1:+49248755 | Msa0552570:CDS |
| ACCACCATTGATCAGCAAAT+GGG | 0.535910 | 4_1:-49248098 | None:intergenic |
| CTGAGCAATGTCAGATCTTG+AGG | 0.536565 | 4_1:+49247033 | Msa0552570:exon |
| ACTATGGTTTACCCAGAAGC+AGG | 0.538768 | 4_1:+49248731 | Msa0552570:CDS |
| TGCATATCCCCATGTTTGGA+TGG | 0.539137 | 4_1:+49249397 | Msa0552570:three_prime_UTR |
| AAAGAAGAGGCCAAGAAGAA+GGG | 0.540838 | 4_1:+49247919 | Msa0552570:CDS |
| TTTAACAACCTTCTCAACAT+TGG | 0.541123 | 4_1:-49247230 | None:intergenic |
| GCATCTCCCACCTTGTACAA+TGG | 0.541928 | 4_1:-49248237 | None:intergenic |
| TGCAGTGATAGTGAGCTGCT+GGG | 0.542560 | 4_1:-49245936 | None:intergenic |
| TGCAGAGACAGCACTCAAGA+AGG | 0.544521 | 4_1:+49247993 | Msa0552570:CDS |
| GTGCCTGTGATAATATTCTC+TGG | 0.544851 | 4_1:-49248040 | None:intergenic |
| CCCCATGTTTGGATGGACAC+AGG | 0.545080 | 4_1:+49249404 | Msa0552570:three_prime_UTR |
| AAAAGTGTACCTCCATTTCA+CGG | 0.546091 | 4_1:-49248275 | None:intergenic |
| TTAATTATGTGTACCTAACA+TGG | 0.547866 | 4_1:+49249278 | Msa0552570:three_prime_UTR |
| ACTACAAATCAAAGAAGGGC+AGG | 0.551021 | 4_1:+49249032 | Msa0552570:CDS |
| GTCCTTCAAGACGCGGCAGA+AGG | 0.553756 | 4_1:+49247198 | Msa0552570:CDS |
| GGAGGAAGTATGGAGCTGTT+GGG | 0.553976 | 4_1:+49248993 | Msa0552570:CDS |
| TTCGAAGGCCACAACAGCAT+CGG | 0.554777 | 4_1:-49247578 | None:intergenic |
| ACCTGTGTCCATCCAAACAT+GGG | 0.555528 | 4_1:-49249405 | None:intergenic |
| CTCATCCCAACAGCGATCCA+CGG | 0.556306 | 4_1:-49247307 | None:intergenic |
| TAATCTGCCCCATGTTGACA+AGG | 0.556764 | 4_1:-49247432 | None:intergenic |
| TGAGTGCTGTCTCTGCATGT+TGG | 0.556997 | 4_1:-49247987 | None:intergenic |
| TAGGATGGTGGTACAAAACC+TGG | 0.558047 | 4_1:+49247959 | Msa0552570:CDS |
| ATTCATAGGCACAGTCACTC+TGG | 0.560173 | 4_1:-49247455 | None:intergenic |
| TCAGATCTTTAGCTTCAGAT+CGG | 0.562889 | 4_1:+49249214 | Msa0552570:three_prime_UTR |
| ATAAGATAAACAGTGTAGGA+TGG | 0.564845 | 4_1:+49247944 | Msa0552570:CDS |
| GTTTGTGTGGACAGAGCCAA+AGG | 0.564893 | 4_1:-49248688 | None:intergenic |
| ACAATGGAACAAGTATGTCC+TGG | 0.569876 | 4_1:-49248221 | None:intergenic |
| CTTGTTCCATTGTACAAGGT+GGG | 0.572279 | 4_1:+49248231 | Msa0552570:CDS |
| GCTTACGAGCGGTGCAGACA+AGG | 0.572892 | 4_1:-49247285 | None:intergenic |
| TGTGTACCTGAGTGAGAGCG+AGG | 0.575051 | 4_1:-49245988 | None:intergenic |
| GGCAACTTGTACAGTTTGTG+TGG | 0.575189 | 4_1:-49248701 | None:intergenic |
| GGGCAGGAAAACCGAGAAGG+AGG | 0.579702 | 4_1:+49249048 | Msa0552570:CDS |
| CAGAGGAATCCCTCAAAGGA+TGG | 0.580415 | 4_1:+49247262 | Msa0552570:CDS |
| TCTGCACCGCTCGTAAGCCG+TGG | 0.581740 | 4_1:+49247290 | Msa0552570:CDS |
| GGGAATAAGATAAACAGTGT+AGG | 0.583093 | 4_1:+49247940 | Msa0552570:CDS |
| TTTGTAGTACACACTCATGA+AGG | 0.583475 | 4_1:-49249017 | None:intergenic |
| GTAGAGCCCCTTGTCAACAT+GGG | 0.583539 | 4_1:+49247424 | Msa0552570:CDS |
| ACAAGATGTTTGTATTGGGA+GGG | 0.589194 | 4_1:+49248063 | Msa0552570:CDS |
| TGTGAGAAAATAAAGTGTGA+AGG | 0.590523 | 4_1:-49247146 | None:intergenic |
| GGACGGTTTAAGATGAGAGT+GGG | 0.591903 | 4_1:+49245844 | Msa0552570:five_prime_UTR |
| CTGTGATAATATTCTCTGGT+GGG | 0.593410 | 4_1:-49248036 | None:intergenic |
| CGTGGTCTCAGGGAACACTT+GGG | 0.593768 | 4_1:+49247674 | Msa0552570:CDS |
| CTGCATATGCAGTTTCAAGG+TGG | 0.595101 | 4_1:-49249090 | None:intergenic |
| TCTCTGCTCAAGGCAACTCA+AGG | 0.597619 | 4_1:+49248159 | Msa0552570:CDS |
| GAGGTATGCTTCGAAAGAAG+AGG | 0.600590 | 4_1:+49247906 | Msa0552570:CDS |
| GAGCTGGACGATCTTACCGT+TGG | 0.600852 | 4_1:+49247499 | Msa0552570:CDS |
| TTTGTGTGGACAGAGCCAAA+GGG | 0.601704 | 4_1:-49248687 | None:intergenic |
| ATAGCCATATCAGTCTCAAA+CGG | 0.602404 | 4_1:-49249310 | None:intergenic |
| TTCTTCCTCTTAGGGCGCAG+GGG | 0.604740 | 4_1:-49247058 | None:intergenic |
| GTTGGAGTTTACTATGCACC+AGG | 0.604822 | 4_1:+49248809 | Msa0552570:CDS |
| AACACGAGCTGTATGCATGA+CGG | 0.605350 | 4_1:+49247882 | Msa0552570:CDS |
| CAAAGAGAGAATGATTGCTA+GGG | 0.605431 | 4_1:+49247402 | Msa0552570:CDS |
| TCACCCCTTAACACAGGACC+TGG | 0.606936 | 4_1:-49248827 | None:intergenic |
| ACCATTTATGAGGCCACCAA+CGG | 0.607260 | 4_1:-49247515 | None:intergenic |
| GTCTATATGAGCATTGTAGG+AGG | 0.608973 | 4_1:+49248975 | Msa0552570:CDS |
| ACTCTCCCTCGCTCTCACTC+AGG | 0.609621 | 4_1:+49245982 | Msa0552570:five_prime_UTR |
| TTGTTAAACGTCTCAAACAG+AGG | 0.610205 | 4_1:+49247245 | Msa0552570:CDS |
| CAAACAGAGGAATCCCTCAA+AGG | 0.611223 | 4_1:+49247258 | Msa0552570:CDS |
| AAGAAGAGGCCAAGAAGAAG+GGG | 0.611230 | 4_1:+49247920 | Msa0552570:CDS |
| CGGACGGTTTAAGATGAGAG+TGG | 0.611836 | 4_1:+49245843 | Msa0552570:five_prime_UTR |
| GCAGAGACAGCACTCAAGAA+GGG | 0.611871 | 4_1:+49247994 | Msa0552570:CDS |
| TACCCTGAAAGATATTGCAC+AGG | 0.613826 | 4_1:+49247771 | Msa0552570:CDS |
| ACACGATGCCAATGTTGAGA+AGG | 0.614178 | 4_1:+49247222 | Msa0552570:CDS |
| AAGACAAAAGAAGGCACGGA+CGG | 0.614873 | 4_1:+49245827 | Msa0552570:five_prime_UTR |
| GTGTACCTGAGTGAGAGCGA+GGG | 0.615166 | 4_1:-49245987 | None:intergenic |
| ATCTGCCAGAACAATTTCGA+AGG | 0.615777 | 4_1:-49247593 | None:intergenic |
| GAAGGGCAGGAAAACCGAGA+AGG | 0.616478 | 4_1:+49249045 | Msa0552570:CDS |
| GTGTACTACAAATCAAAGAA+GGG | 0.617792 | 4_1:+49249028 | Msa0552570:CDS |
| AATCTGCCCCATGTTGACAA+GGG | 0.619059 | 4_1:-49247431 | None:intergenic |
| CCACCAGAGAATATTATCAC+AGG | 0.620417 | 4_1:+49248037 | Msa0552570:CDS |
| GGACCAGGACAATGATGAGA+AGG | 0.621081 | 4_1:+49247825 | Msa0552570:CDS |
| GAGAAATGTTGACTATAAGA+GGG | 0.622561 | 4_1:+49247327 | Msa0552570:CDS |
| TATGAATCTCGCACTTGCTG+TGG | 0.623847 | 4_1:+49247471 | Msa0552570:CDS |
| ATCTGCCCCATGTTGACAAG+GGG | 0.624488 | 4_1:-49247430 | None:intergenic |
| GCACCAGGTCCTGTGTTAAG+GGG | 0.625785 | 4_1:+49248824 | Msa0552570:CDS |
| GTCATGCATACAGCTCGTGT+TGG | 0.625993 | 4_1:-49247880 | None:intergenic |
| TGAATGAGAAAAGCTTCTGG+AGG | 0.626733 | 4_1:+49248939 | Msa0552570:CDS |
| GCAGTGATAGTGAGCTGCTG+GGG | 0.633053 | 4_1:-49245935 | None:intergenic |
| CAATAAATTCAGAAACAACA+AGG | 0.637374 | 4_1:-49249175 | None:intergenic |
| ACTTGTTCCATTGTACAAGG+TGG | 0.646015 | 4_1:+49248230 | Msa0552570:CDS |
| CCTGTGATAATATTCTCTGG+TGG | 0.646613 | 4_1:-49248037 | None:intergenic |
| TTCTCTTGTTAAAGCCACCA+AGG | 0.648409 | 4_1:+49247618 | Msa0552570:CDS |
| ACCATTGATCAGCAAATGGG+AGG | 0.651120 | 4_1:-49248095 | None:intergenic |
| AGCGATCCACGGCTTACGAG+CGG | 0.651614 | 4_1:-49247296 | None:intergenic |
| ATGGGTTGACCGTGAAATGG+AGG | 0.651686 | 4_1:+49248266 | Msa0552570:CDS |
| CCTTGAGCAGAGAAACCTTG+GGG | 0.652575 | 4_1:-49248149 | None:intergenic |
| AACACCTCACCCCTTAACAC+AGG | 0.657021 | 4_1:-49248833 | None:intergenic |
| AGATAAACAGTGTAGGATGG+TGG | 0.658759 | 4_1:+49247947 | Msa0552570:CDS |
| CACGAGCTGTATGCATGACG+GGG | 0.661011 | 4_1:+49247884 | Msa0552570:CDS |
| TAGAGCCCCTTGTCAACATG+GGG | 0.667503 | 4_1:+49247425 | Msa0552570:CDS |
| TTGTGTGGACAGAGCCAAAG+GGG | 0.667538 | 4_1:-49248686 | None:intergenic |
| AGTTCAGACACAGCGTACTG+TGG | 0.672226 | 4_1:-49248917 | None:intergenic |
| GAGCTGTATGCATGACGGGG+AGG | 0.676766 | 4_1:+49247887 | Msa0552570:CDS |
| CTTGAGCAGAGAAACCTTGG+GGG | 0.692352 | 4_1:-49248148 | None:intergenic |
| CCTGTGTCCATCCAAACATG+GGG | 0.697673 | 4_1:-49249404 | None:intergenic |
| AGTGGAAGTCCTTCAAGACG+CGG | 0.706174 | 4_1:+49247191 | Msa0552570:CDS |
| TTGAGCAGAGAAACCTTGGG+GGG | 0.708905 | 4_1:-49248147 | None:intergenic |
| TGTGTGGACAGAGCCAAAGG+GGG | 0.739581 | 4_1:-49248685 | None:intergenic |
| TTGGTGATGTGAGATCTGAG+TGG | 0.776053 | 4_1:+49247173 | Msa0552570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAAAATAAGTTTGTT+TGG | + | chr4_1:49246508-49246527 | Msa0552570:intron | 10.0% |
| !!! | AATTTGATTTAATTCACTTT+TGG | + | chr4_1:49246817-49246836 | Msa0552570:intron | 15.0% |
| !! | AACTAACTAAAACATTATTA+AGG | - | chr4_1:49248312-49248331 | None:intergenic | 15.0% |
| !! | ATTGAAACTTAAACTTTAAA+TGG | - | chr4_1:49248375-49248394 | None:intergenic | 15.0% |
| !! | TAAGTAAAGAAGCTAATTAA+GGG | - | chr4_1:49246279-49246298 | None:intergenic | 20.0% |
| !! | TTAAGTAAAGAAGCTAATTA+AGG | - | chr4_1:49246280-49246299 | None:intergenic | 20.0% |
| !!! | TTAATTGATAATTGAAAAGC+TGG | - | chr4_1:49246410-49246429 | None:intergenic | 20.0% |
| !!! | TTATAGCTGTTTTTAGATTA+TGG | + | chr4_1:49246627-49246646 | Msa0552570:intron | 20.0% |
| !! | TATAACAAACTGATGTAATT+TGG | + | chr4_1:49246687-49246706 | Msa0552570:intron | 20.0% |
| !!! | CAGTAATCAATAAATGATTT+TGG | - | chr4_1:49246719-49246738 | None:intergenic | 20.0% |
| !! | AATCAAAAGAAACTAAACTT+GGG | + | chr4_1:49248392-49248411 | Msa0552570:intron | 20.0% |
| !! | TGAAATTCTGATTTATTTGA+TGG | + | chr4_1:49249138-49249157 | Msa0552570:three_prime_UTR | 20.0% |
| !!! | AAAAACTTTTTTGAGGTTTA+AGG | - | chr4_1:49249362-49249381 | None:intergenic | 20.0% |
| !! | GTTTGATTCCATTGATTAAA+AGG | + | chr4_1:49246194-49246213 | Msa0552570:intron | 25.0% |
| !!! | TTGGGGTTTTTTACTTTTAT+CGG | + | chr4_1:49246241-49246260 | Msa0552570:intron | 25.0% |
| ! | TCTGTTTACAAGTTAAGTTA+AGG | + | chr4_1:49246432-49246451 | Msa0552570:intron | 25.0% |
| ! | CTGTTTACAAGTTAAGTTAA+GGG | + | chr4_1:49246433-49246452 | Msa0552570:intron | 25.0% |
| ! | GACATATAAATTCTAAACCT+TGG | - | chr4_1:49246877-49246896 | None:intergenic | 25.0% |
| ! | AAATAAAGTGTGAAGGAAAT+GGG | - | chr4_1:49247142-49247161 | None:intergenic | 25.0% |
| ! | AAAATAAAGTGTGAAGGAAA+TGG | - | chr4_1:49247143-49247162 | None:intergenic | 25.0% |
| !!! | CTTTATTTTCTCACATACTT+TGG | + | chr4_1:49247154-49247173 | Msa0552570:CDS | 25.0% |
| ! | CAATCAAAAGAAACTAAACT+TGG | + | chr4_1:49248391-49248410 | Msa0552570:intron | 25.0% |
| ! | ATCAAAAGAAACTAAACTTG+GGG | + | chr4_1:49248393-49248412 | Msa0552570:intron | 25.0% |
| ! | CTGTTAAGATCTATAGTAAT+TGG | + | chr4_1:49248468-49248487 | Msa0552570:intron | 25.0% |
| ! | CAATAAATTCAGAAACAACA+AGG | - | chr4_1:49249178-49249197 | None:intergenic | 25.0% |
| ! | TTAATTATGTGTACCTAACA+TGG | + | chr4_1:49249278-49249297 | Msa0552570:three_prime_UTR | 25.0% |
| !!! | TAAGGCAAAAAACTTTTTTG+AGG | - | chr4_1:49249369-49249388 | None:intergenic | 25.0% |
| TGAATGAATGATGGTAAATG+TGG | - | chr4_1:49246108-49246127 | None:intergenic | 30.0% | |
| GTTGAGAAATGAATGAATGA+TGG | - | chr4_1:49246117-49246136 | None:intergenic | 30.0% | |
| TGTTTAGAGATAGATCTATC+TGG | - | chr4_1:49246146-49246165 | None:intergenic | 30.0% | |
| ! | AGAATCTGCCTTTTAATCAA+TGG | - | chr4_1:49246205-49246224 | None:intergenic | 30.0% |
| ! | TCTCATAGTGTTGTTAGATT+TGG | + | chr4_1:49246222-49246241 | Msa0552570:intron | 30.0% |
| ! | CTCATAGTGTTGTTAGATTT+GGG | + | chr4_1:49246223-49246242 | Msa0552570:intron | 30.0% |
| ! | TCATAGTGTTGTTAGATTTG+GGG | + | chr4_1:49246224-49246243 | Msa0552570:intron | 30.0% |
| TAAAGAAGCTAATTAAGGGT+GGG | - | chr4_1:49246275-49246294 | None:intergenic | 30.0% | |
| ! | TTTTGAATCTTCTCTTTCAC+TGG | + | chr4_1:49246765-49246784 | Msa0552570:intron | 30.0% |
| !! | GATTTAATTCACTTTTGGAC+TGG | + | chr4_1:49246822-49246841 | Msa0552570:intron | 30.0% |
| ! | ACTATTTTGTTCAGTTTCGA+TGG | + | chr4_1:49247092-49247111 | Msa0552570:CDS | 30.0% |
| !!! | ATGGATCCTTGTTATTTTTG+TGG | + | chr4_1:49247111-49247130 | Msa0552570:CDS | 30.0% |
| GAAGAACCACAAAAATAACA+AGG | - | chr4_1:49247120-49247139 | None:intergenic | 30.0% | |
| TGTGAGAAAATAAAGTGTGA+AGG | - | chr4_1:49247149-49247168 | None:intergenic | 30.0% | |
| TTTAACAACCTTCTCAACAT+TGG | - | chr4_1:49247233-49247252 | None:intergenic | 30.0% | |
| ! | TGAGAAATGTTGACTATAAG+AGG | + | chr4_1:49247326-49247345 | Msa0552570:CDS | 30.0% |
| ! | GAGAAATGTTGACTATAAGA+GGG | + | chr4_1:49247327-49247346 | Msa0552570:CDS | 30.0% |
| AACTTCATGTACTCCTTAAT+GGG | - | chr4_1:49247730-49247749 | None:intergenic | 30.0% | |
| TAACTTCATGTACTCCTTAA+TGG | - | chr4_1:49247731-49247750 | None:intergenic | 30.0% | |
| TTAACCTATAAACCAGTTGT+TGG | + | chr4_1:49247748-49247767 | Msa0552570:CDS | 30.0% | |
| AATCATAGTTTCAACGAAGT+CGG | - | chr4_1:49247854-49247873 | None:intergenic | 30.0% | |
| ATAAGATAAACAGTGTAGGA+TGG | + | chr4_1:49247944-49247963 | Msa0552570:CDS | 30.0% | |
| !! | TTTTTCAGACTGTTTCATTC+AGG | + | chr4_1:49248336-49248355 | Msa0552570:intron | 30.0% |
| ! | TTTTCAGACTGTTTCATTCA+GGG | + | chr4_1:49248337-49248356 | Msa0552570:intron | 30.0% |
| TCTTAACAGACAAAGGAAAT+GGG | - | chr4_1:49248457-49248476 | None:intergenic | 30.0% | |
| ATCTTAACAGACAAAGGAAA+TGG | - | chr4_1:49248458-49248477 | None:intergenic | 30.0% | |
| CTATAGATCTTAACAGACAA+AGG | - | chr4_1:49248464-49248483 | None:intergenic | 30.0% | |
| TATCAATTCAAGCTTATGTC+AGG | + | chr4_1:49248587-49248606 | Msa0552570:intron | 30.0% | |
| TGTGTACTACAAATCAAAGA+AGG | + | chr4_1:49249027-49249046 | Msa0552570:CDS | 30.0% | |
| GTGTACTACAAATCAAAGAA+GGG | + | chr4_1:49249028-49249047 | Msa0552570:CDS | 30.0% | |
| ! | GGGATATGCATTGTATTTTA+AGG | - | chr4_1:49249387-49249406 | None:intergenic | 30.0% |
| AAGGAACTTTATAGATGCAT+TGG | + | chr4_1:49249460-49249479 | Msa0552570:three_prime_UTR | 30.0% | |
| AGGAACTTTATAGATGCATT+GGG | + | chr4_1:49249461-49249480 | Msa0552570:three_prime_UTR | 30.0% | |
| GAAAAAGACAAAAGAAGGCA+CGG | + | chr4_1:49245823-49245842 | Msa0552570:five_prime_UTR | 35.0% | |
| CAAACTACATGCAGAAATTG+TGG | - | chr4_1:49246179-49246198 | None:intergenic | 35.0% | |
| AAAGAAGCTAATTAAGGGTG+GGG | - | chr4_1:49246274-49246293 | None:intergenic | 35.0% | |
| GTAAAGAAGCTAATTAAGGG+TGG | - | chr4_1:49246276-49246295 | None:intergenic | 35.0% | |
| ! | AGAAGTGTGTTATATAGCCA+AGG | + | chr4_1:49246857-49246876 | Msa0552570:intron | 35.0% |
| ! | GAGTTGATTATTCACACTAG+TGG | - | chr4_1:49246935-49246954 | None:intergenic | 35.0% |
| CCTTCAAAACTTCACAACTA+CGG | - | chr4_1:49246966-49246985 | None:intergenic | 35.0% | |
| TTGTTAAACGTCTCAAACAG+AGG | + | chr4_1:49247245-49247264 | Msa0552570:CDS | 35.0% | |
| ! | AAGTTGATCTTTCTGCTTTC+AGG | + | chr4_1:49247362-49247381 | Msa0552570:CDS | 35.0% |
| ACAAAGAGAGAATGATTGCT+AGG | + | chr4_1:49247401-49247420 | Msa0552570:CDS | 35.0% | |
| CAAAGAGAGAATGATTGCTA+GGG | + | chr4_1:49247402-49247421 | Msa0552570:CDS | 35.0% | |
| ATAAATGGTTACGGGATAGA+AGG | + | chr4_1:49247529-49247548 | Msa0552570:CDS | 35.0% | |
| ! | ATCTATTTTACGCTATTCCG+TGG | + | chr4_1:49247656-49247675 | Msa0552570:CDS | 35.0% |
| GATCAAGCTTATACCCATTA+AGG | + | chr4_1:49247714-49247733 | Msa0552570:CDS | 35.0% | |
| ATCATAGTTTCAACGAAGTC+GGG | - | chr4_1:49247853-49247872 | None:intergenic | 35.0% | |
| TATCTTATTCCCCTTCTTCT+TGG | - | chr4_1:49247932-49247951 | None:intergenic | 35.0% | |
| GGGAATAAGATAAACAGTGT+AGG | + | chr4_1:49247940-49247959 | Msa0552570:CDS | 35.0% | |
| CTGTGATAATATTCTCTGGT+GGG | - | chr4_1:49248039-49248058 | None:intergenic | 35.0% | |
| GCACACAAGATGTTTGTATT+GGG | + | chr4_1:49248059-49248078 | Msa0552570:CDS | 35.0% | |
| ACAAGATGTTTGTATTGGGA+GGG | + | chr4_1:49248063-49248082 | Msa0552570:CDS | 35.0% | |
| CATACTTGTTCCATTGTACA+AGG | + | chr4_1:49248227-49248246 | Msa0552570:CDS | 35.0% | |
| ! | AAAAGTGTACCTCCATTTCA+CGG | - | chr4_1:49248278-49248297 | None:intergenic | 35.0% |
| GAAGAAGCAGTAAACTTCAA+AGG | - | chr4_1:49248513-49248532 | None:intergenic | 35.0% | |
| AACTGAATGAGAAAAGCTTC+TGG | + | chr4_1:49248936-49248955 | Msa0552570:CDS | 35.0% | |
| TTTGTAGTACACACTCATGA+AGG | - | chr4_1:49249020-49249039 | None:intergenic | 35.0% | |
| AGAATTTCAAATCAGTCTGC+TGG | - | chr4_1:49249127-49249146 | None:intergenic | 35.0% | |
| ! | TCAGATCTTTAGCTTCAGAT+CGG | + | chr4_1:49249214-49249233 | Msa0552570:three_prime_UTR | 35.0% |
| CAAAAACAGTATCAGCAACT+AGG | - | chr4_1:49249240-49249259 | None:intergenic | 35.0% | |
| ACGGTTAAAATCACCATGTT+AGG | - | chr4_1:49249294-49249313 | None:intergenic | 35.0% | |
| ! | TTAACCGTTTGAGACTGATA+TGG | + | chr4_1:49249306-49249325 | Msa0552570:three_prime_UTR | 35.0% |
| ATAGCCATATCAGTCTCAAA+CGG | - | chr4_1:49249313-49249332 | None:intergenic | 35.0% | |
| !!! | CTTTTTTGAGGTTTAAGGCA+AGG | - | chr4_1:49249357-49249376 | None:intergenic | 35.0% |
| ! | ATAAAGTTCCTTTCTGGCAA+AGG | - | chr4_1:49249452-49249471 | None:intergenic | 35.0% |
| GCATCTATAAAGTTCCTTTC+TGG | - | chr4_1:49249458-49249477 | None:intergenic | 35.0% | |
| !! | TCCTGTGCGTGTTTTGAATT+TGG | + | chr4_1:49246033-49246052 | Msa0552570:intron | 40.0% |
| TCCAAATTCAAAACACGCAC+AGG | - | chr4_1:49246037-49246056 | None:intergenic | 40.0% | |
| !! | CCGTAGTTGTGAAGTTTTGA+AGG | + | chr4_1:49246963-49246982 | Msa0552570:intron | 40.0% |
| CCCAAATCTTCTTCCTCTTA+GGG | - | chr4_1:49247069-49247088 | None:intergenic | 40.0% | |
| CCCTAAGAGGAAGAAGATTT+GGG | + | chr4_1:49247066-49247085 | Msa0552570:CDS | 40.0% | |
| ACCCAAATCTTCTTCCTCTT+AGG | - | chr4_1:49247070-49247089 | None:intergenic | 40.0% | |
| CTATCCCGTAACCATTTATG+AGG | - | chr4_1:49247528-49247547 | None:intergenic | 40.0% | |
| GAAGGAAGTTCCCACAAATA+TGG | + | chr4_1:49247547-49247566 | Msa0552570:CDS | 40.0% | |
| GGAAAAGAGGCCATATTTGT+GGG | - | chr4_1:49247560-49247579 | None:intergenic | 40.0% | |
| ATCTGCCAGAACAATTTCGA+AGG | - | chr4_1:49247596-49247615 | None:intergenic | 40.0% | |
| TTCGAAATTGTTCTGGCAGA+TGG | + | chr4_1:49247595-49247614 | Msa0552570:CDS | 40.0% | |
| TTCTCTTGTTAAAGCCACCA+AGG | + | chr4_1:49247618-49247637 | Msa0552570:CDS | 40.0% | |
| ! | ATCAGAGTACTCATTGTCCT+TGG | - | chr4_1:49247638-49247657 | None:intergenic | 40.0% |
| ! | GGTACCAACAACTGGTTTAT+AGG | - | chr4_1:49247755-49247774 | None:intergenic | 40.0% |
| TACCCTGAAAGATATTGCAC+AGG | + | chr4_1:49247771-49247790 | Msa0552570:CDS | 40.0% | |
| TGCCTGTGCAATATCTTTCA+GGG | - | chr4_1:49247776-49247795 | None:intergenic | 40.0% | |
| ATGCCTGTGCAATATCTTTC+AGG | - | chr4_1:49247777-49247796 | None:intergenic | 40.0% | |
| ! | ATTCTTTTGCTCCCAGAGAT+GGG | + | chr4_1:49247803-49247822 | Msa0552570:CDS | 40.0% |
| AAAGAAGAGGCCAAGAAGAA+GGG | + | chr4_1:49247919-49247938 | Msa0552570:CDS | 40.0% | |
| AGATAAACAGTGTAGGATGG+TGG | + | chr4_1:49247947-49247966 | Msa0552570:CDS | 40.0% | |
| CCTGTGATAATATTCTCTGG+TGG | - | chr4_1:49248040-49248059 | None:intergenic | 40.0% | |
| CCACCAGAGAATATTATCAC+AGG | + | chr4_1:49248037-49248056 | Msa0552570:CDS | 40.0% | |
| GTGCCTGTGATAATATTCTC+TGG | - | chr4_1:49248043-49248062 | None:intergenic | 40.0% | |
| GGCACACAAGATGTTTGTAT+TGG | + | chr4_1:49248058-49248077 | Msa0552570:CDS | 40.0% | |
| CACAAGATGTTTGTATTGGG+AGG | + | chr4_1:49248062-49248081 | Msa0552570:CDS | 40.0% | |
| ACCACCATTGATCAGCAAAT+GGG | - | chr4_1:49248101-49248120 | None:intergenic | 40.0% | |
| AACCACCATTGATCAGCAAA+TGG | - | chr4_1:49248102-49248121 | None:intergenic | 40.0% | |
| TTGCTGATCAATGGTGGTTT+AGG | + | chr4_1:49248103-49248122 | Msa0552570:CDS | 40.0% | |
| ! | TGGTGGTTTAGGTTTCTGTT+TGG | + | chr4_1:49248114-49248133 | Msa0552570:CDS | 40.0% |
| CCTGGATAACATGCATTTCA+TGG | - | chr4_1:49248206-49248225 | None:intergenic | 40.0% | |
| CCATGAAATGCATGTTATCC+AGG | + | chr4_1:49248203-49248222 | Msa0552570:CDS | 40.0% | |
| ACAATGGAACAAGTATGTCC+TGG | - | chr4_1:49248224-49248243 | None:intergenic | 40.0% | |
| ACTTGTTCCATTGTACAAGG+TGG | + | chr4_1:49248230-49248249 | Msa0552570:CDS | 40.0% | |
| CTTGTTCCATTGTACAAGGT+GGG | + | chr4_1:49248231-49248250 | Msa0552570:CDS | 40.0% | |
| ACACAAACTGTACAAGTTGC+CGG | + | chr4_1:49248703-49248722 | Msa0552570:CDS | 40.0% | |
| !!! | GGGTAAACCATAGTTTTGAC+CGG | - | chr4_1:49248725-49248744 | None:intergenic | 40.0% |
| GCTCAAATGTTCACAGATGT+TGG | + | chr4_1:49248791-49248810 | Msa0552570:CDS | 40.0% | |
| TGAATGAGAAAAGCTTCTGG+AGG | + | chr4_1:49248939-49248958 | Msa0552570:CDS | 40.0% | |
| ! | CTGGTCTATATGAGCATTGT+AGG | + | chr4_1:49248972-49248991 | Msa0552570:CDS | 40.0% |
| ! | GTCTATATGAGCATTGTAGG+AGG | + | chr4_1:49248975-49248994 | Msa0552570:CDS | 40.0% |
| ACTACAAATCAAAGAAGGGC+AGG | + | chr4_1:49249032-49249051 | Msa0552570:CDS | 40.0% | |
| TGCATATGCAGTTTCAAGGT+GGG | - | chr4_1:49249092-49249111 | None:intergenic | 40.0% | |
| CTTCTGCATATGCAGTTTCA+AGG | - | chr4_1:49249096-49249115 | None:intergenic | 40.0% | |
| ACAATGCATATCCCCATGTT+TGG | + | chr4_1:49249393-49249412 | Msa0552570:three_prime_UTR | 40.0% | |
| ! | AAGACAAAAGAAGGCACGGA+CGG | + | chr4_1:49245827-49245846 | Msa0552570:five_prime_UTR | 45.0% |
| ! | GGACGGTTTAAGATGAGAGT+GGG | + | chr4_1:49245844-49245863 | Msa0552570:five_prime_UTR | 45.0% |
| CAGAATCGAGAAGATCGAGA+CGG | - | chr4_1:49246082-49246101 | None:intergenic | 45.0% | |
| CTGAGCAATGTCAGATCTTG+AGG | + | chr4_1:49247033-49247052 | Msa0552570:exon | 45.0% | |
| GCCCTAAGAGGAAGAAGATT+TGG | + | chr4_1:49247065-49247084 | Msa0552570:CDS | 45.0% | |
| !! | TTGGTGATGTGAGATCTGAG+TGG | + | chr4_1:49247173-49247192 | Msa0552570:CDS | 45.0% |
| ACACGATGCCAATGTTGAGA+AGG | + | chr4_1:49247222-49247241 | Msa0552570:CDS | 45.0% | |
| CAAACAGAGGAATCCCTCAA+AGG | + | chr4_1:49247258-49247277 | Msa0552570:CDS | 45.0% | |
| AATCTGCCCCATGTTGACAA+GGG | - | chr4_1:49247434-49247453 | None:intergenic | 45.0% | |
| TAATCTGCCCCATGTTGACA+AGG | - | chr4_1:49247435-49247454 | None:intergenic | 45.0% | |
| ATTCATAGGCACAGTCACTC+TGG | - | chr4_1:49247458-49247477 | None:intergenic | 45.0% | |
| ACAGCAAGTGCGAGATTCAT+AGG | - | chr4_1:49247472-49247491 | None:intergenic | 45.0% | |
| ! | TATGAATCTCGCACTTGCTG+TGG | + | chr4_1:49247471-49247490 | Msa0552570:CDS | 45.0% |
| ACCATTTATGAGGCCACCAA+CGG | - | chr4_1:49247518-49247537 | None:intergenic | 45.0% | |
| GGTGGCCTCATAAATGGTTA+CGG | + | chr4_1:49247520-49247539 | Msa0552570:CDS | 45.0% | |
| GTGGCCTCATAAATGGTTAC+GGG | + | chr4_1:49247521-49247540 | Msa0552570:CDS | 45.0% | |
| CGGAAAAGAGGCCATATTTG+TGG | - | chr4_1:49247561-49247580 | None:intergenic | 45.0% | |
| TGTGGCCTTCGAAATTGTTC+TGG | + | chr4_1:49247588-49247607 | Msa0552570:CDS | 45.0% | |
| ! | AGAGTACTCATTGTCCTTGG+TGG | - | chr4_1:49247635-49247654 | None:intergenic | 45.0% |
| ! | TCTTTCAGGGTACCAACAAC+TGG | - | chr4_1:49247763-49247782 | None:intergenic | 45.0% |
| ! | GATTCTTTTGCTCCCAGAGA+TGG | + | chr4_1:49247802-49247821 | Msa0552570:CDS | 45.0% |
| ! | TTCTTTTGCTCCCAGAGATG+GGG | + | chr4_1:49247804-49247823 | Msa0552570:CDS | 45.0% |
| GAACCTTCTCATCATTGTCC+TGG | - | chr4_1:49247831-49247850 | None:intergenic | 45.0% | |
| AACACGAGCTGTATGCATGA+CGG | + | chr4_1:49247882-49247901 | Msa0552570:CDS | 45.0% | |
| GAGGTATGCTTCGAAAGAAG+AGG | + | chr4_1:49247906-49247925 | Msa0552570:CDS | 45.0% | |
| GAAAGAAGAGGCCAAGAAGA+AGG | + | chr4_1:49247918-49247937 | Msa0552570:CDS | 45.0% | |
| AAGAAGAGGCCAAGAAGAAG+GGG | + | chr4_1:49247920-49247939 | Msa0552570:CDS | 45.0% | |
| ! | TAGGATGGTGGTACAAAACC+TGG | + | chr4_1:49247959-49247978 | Msa0552570:CDS | 45.0% |
| ! | TCCTCCCATTTGCTGATCAA+TGG | + | chr4_1:49248094-49248113 | Msa0552570:CDS | 45.0% |
| ACCATTGATCAGCAAATGGG+AGG | - | chr4_1:49248098-49248117 | None:intergenic | 45.0% | |
| ! | TCCCATTTGCTGATCAATGG+TGG | + | chr4_1:49248097-49248116 | Msa0552570:CDS | 45.0% |
| ! | GGTTTAGGTTTCTGTTTGGC+TGG | + | chr4_1:49248118-49248137 | Msa0552570:CDS | 45.0% |
| !! | AGAATGGGTTGACCGTGAAA+TGG | + | chr4_1:49248263-49248282 | Msa0552570:CDS | 45.0% |
| AGACTGTTTCATTCAGGGTG+AGG | + | chr4_1:49248342-49248361 | Msa0552570:intron | 45.0% | |
| CATAACAGATCTACCCCCTT+TGG | + | chr4_1:49248672-49248691 | Msa0552570:intron | 45.0% | |
| TTTGTGTGGACAGAGCCAAA+GGG | - | chr4_1:49248690-49248709 | None:intergenic | 45.0% | |
| GGCAACTTGTACAGTTTGTG+TGG | - | chr4_1:49248704-49248723 | None:intergenic | 45.0% | |
| CAAGTTGCCGGTCAAAACTA+TGG | + | chr4_1:49248715-49248734 | Msa0552570:CDS | 45.0% | |
| ACTATGGTTTACCCAGAAGC+AGG | + | chr4_1:49248731-49248750 | Msa0552570:CDS | 45.0% | |
| GTTGGAGTTTACTATGCACC+AGG | + | chr4_1:49248809-49248828 | Msa0552570:CDS | 45.0% | |
| ! | TTAAGGGGTGAGGTGTTTGA+TGG | + | chr4_1:49248839-49248858 | Msa0552570:CDS | 45.0% |
| ! | TTCTGGAGGATGTTTGATGC+TGG | + | chr4_1:49248953-49248972 | Msa0552570:CDS | 45.0% |
| ! | GAGCATTGTAGGAGGAAGTA+TGG | + | chr4_1:49248983-49249002 | Msa0552570:CDS | 45.0% |
| CTGCATATGCAGTTTCAAGG+TGG | - | chr4_1:49249093-49249112 | None:intergenic | 45.0% | |
| TGCATATCCCCATGTTTGGA+TGG | + | chr4_1:49249397-49249416 | Msa0552570:three_prime_UTR | 45.0% | |
| ACCTGTGTCCATCCAAACAT+GGG | - | chr4_1:49249408-49249427 | None:intergenic | 45.0% | |
| AACCTGTGTCCATCCAAACA+TGG | - | chr4_1:49249409-49249428 | None:intergenic | 45.0% | |
| GTTTGGATGGACACAGGTTT+AGG | + | chr4_1:49249410-49249429 | Msa0552570:three_prime_UTR | 45.0% | |
| ! | GATGGACACAGGTTTAGGTT+TGG | + | chr4_1:49249415-49249434 | Msa0552570:three_prime_UTR | 45.0% |
| ! | CTTTCTGGCAAAGGATCGTT+TGG | - | chr4_1:49249443-49249462 | None:intergenic | 45.0% |
| CAAACGATCCTTTGCCAGAA+AGG | + | chr4_1:49249441-49249460 | Msa0552570:three_prime_UTR | 45.0% | |
| ! | CGGACGGTTTAAGATGAGAG+TGG | + | chr4_1:49245843-49245862 | Msa0552570:five_prime_UTR | 50.0% |
| ! | TGCAGTGATAGTGAGCTGCT+GGG | - | chr4_1:49245939-49245958 | None:intergenic | 50.0% |
| ! | TTGCAGTGATAGTGAGCTGC+TGG | - | chr4_1:49245940-49245959 | None:intergenic | 50.0% |
| AGTGGAAGTCCTTCAAGACG+CGG | + | chr4_1:49247191-49247210 | Msa0552570:CDS | 50.0% | |
| CAGAGGAATCCCTCAAAGGA+TGG | + | chr4_1:49247262-49247281 | Msa0552570:CDS | 50.0% | |
| CAGACAAGGCCATCCTTTGA+GGG | - | chr4_1:49247274-49247293 | None:intergenic | 50.0% | |
| GTAGAGCCCCTTGTCAACAT+GGG | + | chr4_1:49247424-49247443 | Msa0552570:CDS | 50.0% | |
| TAGAGCCCCTTGTCAACATG+GGG | + | chr4_1:49247425-49247444 | Msa0552570:CDS | 50.0% | |
| ATCTGCCCCATGTTGACAAG+GGG | - | chr4_1:49247433-49247452 | None:intergenic | 50.0% | |
| !! | ACCGTTGGTGGCCTCATAAA+TGG | + | chr4_1:49247514-49247533 | Msa0552570:CDS | 50.0% |
| ! | CCACAACAGCATCGGAAAAG+AGG | - | chr4_1:49247573-49247592 | None:intergenic | 50.0% |
| ! | CCTCTTTTCCGATGCTGTTG+TGG | + | chr4_1:49247570-49247589 | Msa0552570:CDS | 50.0% |
| TTCGAAGGCCACAACAGCAT+CGG | - | chr4_1:49247581-49247600 | None:intergenic | 50.0% | |
| TTACGCTATTCCGTGGTCTC+AGG | + | chr4_1:49247663-49247682 | Msa0552570:CDS | 50.0% | |
| TACGCTATTCCGTGGTCTCA+GGG | + | chr4_1:49247664-49247683 | Msa0552570:CDS | 50.0% | |
| GGACCAGGACAATGATGAGA+AGG | + | chr4_1:49247825-49247844 | Msa0552570:CDS | 50.0% | |
| GTCATGCATACAGCTCGTGT+TGG | - | chr4_1:49247883-49247902 | None:intergenic | 50.0% | |
| ACACGAGCTGTATGCATGAC+GGG | + | chr4_1:49247883-49247902 | Msa0552570:CDS | 50.0% | |
| ! | CTCTGCATGTTGGTAGAACC+AGG | - | chr4_1:49247980-49247999 | None:intergenic | 50.0% |
| ! | TGAGTGCTGTCTCTGCATGT+TGG | - | chr4_1:49247990-49248009 | None:intergenic | 50.0% |
| TGCAGAGACAGCACTCAAGA+AGG | + | chr4_1:49247993-49248012 | Msa0552570:CDS | 50.0% | |
| GCAGAGACAGCACTCAAGAA+GGG | + | chr4_1:49247994-49248013 | Msa0552570:CDS | 50.0% | |
| TTGAGCAGAGAAACCTTGGG+GGG | - | chr4_1:49248150-49248169 | None:intergenic | 50.0% | |
| CTTGAGCAGAGAAACCTTGG+GGG | - | chr4_1:49248151-49248170 | None:intergenic | 50.0% | |
| CCTTGAGCAGAGAAACCTTG+GGG | - | chr4_1:49248152-49248171 | None:intergenic | 50.0% | |
| GCCTTGAGCAGAGAAACCTT+GGG | - | chr4_1:49248153-49248172 | None:intergenic | 50.0% | |
| TGCCTTGAGCAGAGAAACCT+TGG | - | chr4_1:49248154-49248173 | None:intergenic | 50.0% | |
| TCTCTGCTCAAGGCAACTCA+AGG | + | chr4_1:49248159-49248178 | Msa0552570:CDS | 50.0% | |
| GCATCTCCCACCTTGTACAA+TGG | - | chr4_1:49248240-49248259 | None:intergenic | 50.0% | |
| AGGTGGGAGATGCACTAGAA+TGG | + | chr4_1:49248247-49248266 | Msa0552570:CDS | 50.0% | |
| GGTGGGAGATGCACTAGAAT+GGG | + | chr4_1:49248248-49248267 | Msa0552570:CDS | 50.0% | |
| ! | ATGGGTTGACCGTGAAATGG+AGG | + | chr4_1:49248266-49248285 | Msa0552570:CDS | 50.0% |
| CTGTTTCATTCAGGGTGAGG+TGG | + | chr4_1:49248345-49248364 | Msa0552570:intron | 50.0% | |
| TTGTGTGGACAGAGCCAAAG+GGG | - | chr4_1:49248689-49248708 | None:intergenic | 50.0% | |
| GTTTGTGTGGACAGAGCCAA+AGG | - | chr4_1:49248691-49248710 | None:intergenic | 50.0% | |
| ATGCACCAGGTCCTGTGTTA+AGG | + | chr4_1:49248822-49248841 | Msa0552570:CDS | 50.0% | |
| TGCACCAGGTCCTGTGTTAA+GGG | + | chr4_1:49248823-49248842 | Msa0552570:CDS | 50.0% | |
| AACACCTCACCCCTTAACAC+AGG | - | chr4_1:49248836-49248855 | None:intergenic | 50.0% | |
| TGCAGATGCTGTGCGTAGAT+TGG | + | chr4_1:49248862-49248881 | Msa0552570:CDS | 50.0% | |
| CTGTGCGTAGATTGGAGAAC+TGG | + | chr4_1:49248870-49248889 | Msa0552570:CDS | 50.0% | |
| AGTTCAGACACAGCGTACTG+TGG | - | chr4_1:49248920-49248939 | None:intergenic | 50.0% | |
| ! | AGGAGGAAGTATGGAGCTGT+TGG | + | chr4_1:49248992-49249011 | Msa0552570:CDS | 50.0% |
| ! | GGAGGAAGTATGGAGCTGTT+GGG | + | chr4_1:49248993-49249012 | Msa0552570:CDS | 50.0% |
| CCTGTGTCCATCCAAACATG+GGG | - | chr4_1:49249407-49249426 | None:intergenic | 50.0% | |
| ! | GCAGTGATAGTGAGCTGCTG+GGG | - | chr4_1:49245938-49245957 | None:intergenic | 55.0% |
| GTGTACCTGAGTGAGAGCGA+GGG | - | chr4_1:49245990-49246009 | None:intergenic | 55.0% | |
| TGTGTACCTGAGTGAGAGCG+AGG | - | chr4_1:49245991-49246010 | None:intergenic | 55.0% | |
| TTCTTCCTCTTAGGGCGCAG+GGG | - | chr4_1:49247061-49247080 | None:intergenic | 55.0% | |
| CTTCTTCCTCTTAGGGCGCA+GGG | - | chr4_1:49247062-49247081 | None:intergenic | 55.0% | |
| TCTTCTTCCTCTTAGGGCGC+AGG | - | chr4_1:49247063-49247082 | None:intergenic | 55.0% | |
| TTCCTTCTGCCGCGTCTTGA+AGG | - | chr4_1:49247203-49247222 | None:intergenic | 55.0% | |
| GCAGACAAGGCCATCCTTTG+AGG | - | chr4_1:49247275-49247294 | None:intergenic | 55.0% | |
| GTAAGCCGTGGATCGCTGTT+GGG | + | chr4_1:49247302-49247321 | Msa0552570:CDS | 55.0% | |
| CTCATCCCAACAGCGATCCA+CGG | - | chr4_1:49247310-49247329 | None:intergenic | 55.0% | |
| GGTAGAGCCCCTTGTCAACA+TGG | + | chr4_1:49247423-49247442 | Msa0552570:CDS | 55.0% | |
| !! | ACTTGCTGTGGTTGCTGAGC+TGG | + | chr4_1:49247483-49247502 | Msa0552570:CDS | 55.0% |
| GAGCTGGACGATCTTACCGT+TGG | + | chr4_1:49247499-49247518 | Msa0552570:CDS | 55.0% | |
| CTGGACGATCTTACCGTTGG+TGG | + | chr4_1:49247502-49247521 | Msa0552570:CDS | 55.0% | |
| CCAAGTGTTCCCTGAGACCA+CGG | - | chr4_1:49247676-49247695 | None:intergenic | 55.0% | |
| CGTGGTCTCAGGGAACACTT+GGG | + | chr4_1:49247674-49247693 | Msa0552570:CDS | 55.0% | |
| TTGTCCTGGTCCCCATCTCT+GGG | - | chr4_1:49247817-49247836 | None:intergenic | 55.0% | |
| ATTGTCCTGGTCCCCATCTC+TGG | - | chr4_1:49247818-49247837 | None:intergenic | 55.0% | |
| CACGAGCTGTATGCATGACG+GGG | + | chr4_1:49247884-49247903 | Msa0552570:CDS | 55.0% | |
| CCCCAAGGTTTCTCTGCTCA+AGG | + | chr4_1:49248149-49248168 | Msa0552570:CDS | 55.0% | |
| CTTGGGGCTGAGCTTTCATG+TGG | + | chr4_1:49248409-49248428 | Msa0552570:intron | 55.0% | |
| TGTGTGGACAGAGCCAAAGG+GGG | - | chr4_1:49248688-49248707 | None:intergenic | 55.0% | |
| GCAGCTCAAAGCCTGCTTCT+GGG | - | chr4_1:49248745-49248764 | None:intergenic | 55.0% | |
| TGCAGCTCAAAGCCTGCTTC+TGG | - | chr4_1:49248746-49248765 | None:intergenic | 55.0% | |
| TTTGAGCTGCAACGCAGGCA+GGG | + | chr4_1:49248755-49248774 | Msa0552570:CDS | 55.0% | |
| GCACCAGGTCCTGTGTTAAG+GGG | + | chr4_1:49248824-49248843 | Msa0552570:CDS | 55.0% | |
| TCACCCCTTAACACAGGACC+TGG | - | chr4_1:49248830-49248849 | None:intergenic | 55.0% | |
| AGGTCCTGTGTTAAGGGGTG+AGG | + | chr4_1:49248829-49248848 | Msa0552570:CDS | 55.0% | |
| GAAGGGCAGGAAAACCGAGA+AGG | + | chr4_1:49249045-49249064 | Msa0552570:CDS | 55.0% | |
| AGCTTCACGCACCTCCTTCT+CGG | - | chr4_1:49249062-49249081 | None:intergenic | 55.0% | |
| CCCCATGTTTGGATGGACAC+AGG | + | chr4_1:49249404-49249423 | Msa0552570:three_prime_UTR | 55.0% | |
| ACTCTCCCTCGCTCTCACTC+AGG | + | chr4_1:49245982-49246001 | Msa0552570:five_prime_UTR | 60.0% | |
| GTCCTTCAAGACGCGGCAGA+AGG | + | chr4_1:49247198-49247217 | Msa0552570:CDS | 60.0% | |
| GCTTACGAGCGGTGCAGACA+AGG | - | chr4_1:49247288-49247307 | None:intergenic | 60.0% | |
| AGCGATCCACGGCTTACGAG+CGG | - | chr4_1:49247299-49247318 | None:intergenic | 60.0% | |
| CGTAAGCCGTGGATCGCTGT+TGG | + | chr4_1:49247301-49247320 | Msa0552570:CDS | 60.0% | |
| CCGTGGTCTCAGGGAACACT+TGG | + | chr4_1:49247673-49247692 | Msa0552570:CDS | 60.0% | |
| ! | GAGCTGTATGCATGACGGGG+AGG | + | chr4_1:49247887-49247906 | Msa0552570:CDS | 60.0% |
| !! | CAGGCTTTGAGCTGCAACGC+AGG | + | chr4_1:49248750-49248769 | Msa0552570:CDS | 60.0% |
| CTTTGAGCTGCAACGCAGGC+AGG | + | chr4_1:49248754-49248773 | Msa0552570:CDS | 60.0% | |
| GGGCAGGAAAACCGAGAAGG+AGG | + | chr4_1:49249048-49249067 | Msa0552570:CDS | 60.0% | |
| TCTGCACCGCTCGTAAGCCG+TGG | + | chr4_1:49247290-49247309 | Msa0552570:CDS | 65.0% | |
| TGCTCCCAGAGATGGGGACC+AGG | + | chr4_1:49247810-49247829 | Msa0552570:CDS | 65.0% | |
| ! | TGGCTGGTTGATGCCCCCCA+AGG | + | chr4_1:49248134-49248153 | Msa0552570:CDS | 65.0% |
| AGGCTCCCCTGCGCCCTAAG+AGG | + | chr4_1:49247053-49247072 | Msa0552570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 49245823 | 49249497 | 49245823 | ID=Msa0552570;Name=Msa0552570 |
| chr4_1 | mRNA | 49245823 | 49249497 | 49245823 | ID=Msa0552570-mRNA-1;Parent=Msa0552570;Name=Msa0552570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=208|1|1|1|0.5|0.33|3|362|567 |
| chr4_1 | exon | 49245823 | 49246003 | 49245823 | ID=Msa0552570-mRNA-1:exon:13665;Parent=Msa0552570-mRNA-1 |
| chr4_1 | exon | 49247013 | 49248287 | 49247013 | ID=Msa0552570-mRNA-1:exon:13666;Parent=Msa0552570-mRNA-1 |
| chr4_1 | exon | 49248680 | 49249497 | 49248680 | ID=Msa0552570-mRNA-1:exon:13667;Parent=Msa0552570-mRNA-1 |
| chr4_1 | five_prime_UTR | 49245823 | 49246003 | 49245823 | ID=Msa0552570-mRNA-1:five_prime_utr;Parent=Msa0552570-mRNA-1 |
| chr4_1 | five_prime_UTR | 49247013 | 49247039 | 49247013 | ID=Msa0552570-mRNA-1:five_prime_utr;Parent=Msa0552570-mRNA-1 |
| chr4_1 | CDS | 49247040 | 49248287 | 49247040 | ID=Msa0552570-mRNA-1:cds;Parent=Msa0552570-mRNA-1 |
| chr4_1 | CDS | 49248680 | 49249135 | 49248680 | ID=Msa0552570-mRNA-1:cds;Parent=Msa0552570-mRNA-1 |
| chr4_1 | three_prime_UTR | 49249136 | 49249497 | 49249136 | ID=Msa0552570-mRNA-1:three_prime_utr;Parent=Msa0552570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
