AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1279210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1279210 MtrunA17_Chr8g0369111 97.357 227 6 0 1 227 1 227 4.29e-164 452
Msa1279210 MtrunA17_Chr7g0233081 41.584 202 116 2 18 219 54 253 2.54e-53 172
Msa1279210 MtrunA17_Chr1g0157131 29.487 156 88 3 53 208 374 507 1.51e-13 69.3
Msa1279210 MtrunA17_Chr8g0366401 27.439 164 96 5 53 213 12 155 6.11e-12 62.0
Msa1279210 MtrunA17_Chr4g0074811 25.641 156 94 2 53 208 391 524 7.25e-12 64.3
Msa1279210 MtrunA17_Chr5g0444171 25.806 155 93 2 54 208 393 525 2.24e-11 62.8
Msa1279210 MtrunA17_Chr4g0033371 28.205 156 90 2 53 208 372 505 3.06e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1279210 AT4G26470.1 74.312 218 54 1 1 218 1 216 6.16e-119 338
Msa1279210 AT4G26470.3 74.312 218 54 1 1 218 64 279 1.49e-117 337
Msa1279210 AT4G26470.2 71.354 192 53 1 1 192 1 190 4.48e-98 285
Msa1279210 AT3G24110.2 43.578 218 120 3 9 224 9 225 2.86e-57 181
Msa1279210 AT3G24110.1 43.578 218 120 3 9 224 12 228 3.64e-57 181
Msa1279210 AT4G04740.4 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04740.6 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04740.5 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04740.3 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04740.1 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04740.7 25.000 204 118 5 8 208 330 501 1.32e-12 67.0
Msa1279210 AT4G04720.2 26.923 156 92 2 53 208 379 512 7.94e-12 64.7
Msa1279210 AT4G04720.1 26.923 156 92 2 53 208 379 512 7.94e-12 64.7
Msa1279210 AT4G04700.1 27.059 170 99 3 42 208 317 464 3.92e-11 62.4
Msa1279210 AT3G20410.2 27.097 155 91 4 54 208 392 524 7.19e-11 61.6
Msa1279210 AT3G20410.1 27.097 155 91 4 54 208 392 524 7.19e-11 61.6
Msa1279210 AT4G04695.1 27.564 156 91 2 53 208 331 464 7.28e-11 61.6

Find 80 sgRNAs with CRISPR-Local

Find 619 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAGCTTGTTTGGAATAT+AGG 0.226172 8_3:+16090459 Msa1279210:three_prime_UTR
AAATGGAATGGTGAACTTTA+AGG 0.231657 8_3:+16090060 Msa1279210:CDS
TATAAAGCTATAAGCTTGTT+TGG 0.256168 8_3:+16090451 Msa1279210:three_prime_UTR
AAGAAATATAGATAAGCTTA+TGG 0.284529 8_3:-16090419 None:intergenic
TGATGTCATCTTAATGTCTT+TGG 0.288888 8_3:+16090155 Msa1279210:three_prime_UTR
ATTTCTCTCCTACCAACTTT+AGG 0.291337 8_3:+16083195 Msa1279210:five_prime_UTR
TGTATTCTTAGACAAGAATA+AGG 0.312157 8_3:+16085496 Msa1279210:CDS
TCAAATGTGGCCTCCAGATT+TGG 0.325162 8_3:-16085455 None:intergenic
AACCAAGCTTGAGGCTAAAA+TGG 0.325884 8_3:+16083806 Msa1279210:CDS
CTGGAATAGCCTTCTTGCTT+TGG 0.335305 8_3:-16090219 None:intergenic
ACATCCGGGGAACGTTCTTC+TGG 0.336685 8_3:+16085566 Msa1279210:CDS
ACGAATTGGCATGCCAAATC+TGG 0.337140 8_3:+16085442 Msa1279210:CDS
GTTAATCAATCAACTATGTT+TGG 0.341619 8_3:-16083030 None:intergenic
TATAGTGTTGAATGATTTCA+TGG 0.344014 8_3:-16083865 None:intergenic
CCTTTATTACAAGTGAAAAC+TGG 0.350695 8_3:-16090238 None:intergenic
AAGATATCATCATAGTAATT+AGG 0.357756 8_3:-16083116 None:intergenic
GATATAAGGTGGCATTTAAC+AGG 0.364573 8_3:-16090353 None:intergenic
TTGCCAAAATGCAGAAGAAA+TGG 0.366048 8_3:+16090027 Msa1279210:intron
ATGCCACCTTATATCTGTAT+TGG 0.368589 8_3:+16090361 Msa1279210:three_prime_UTR
AAGAAACCAATACAGATATA+AGG 0.369943 8_3:-16090367 None:intergenic
AGAATAGCCATGAAAAGATT+TGG 0.372821 8_3:+16085590 Msa1279210:CDS
GCCGCAGATGAAGATTCTAA+TGG 0.378648 8_3:+16084602 Msa1279210:intron
CCGCAGATGAAGATTCTAAT+GGG 0.395441 8_3:+16084603 Msa1279210:intron
TTAATCAATCAACTATGTTT+GGG 0.406378 8_3:-16083029 None:intergenic
ACGCACTTTGGTTGATTGAT+TGG 0.419304 8_3:+16083728 Msa1279210:five_prime_UTR
ACATTAAGATGACATCATTC+AGG 0.422285 8_3:-16090149 None:intergenic
AGGGCCATCTTTGAGCAGTT+TGG 0.430873 8_3:+16083930 Msa1279210:CDS
CTTGTCTAGAAATCACGAAT+TGG 0.446229 8_3:+16085428 Msa1279210:intron
GGAGAGAAATTAGTGAAGAG+TGG 0.463123 8_3:-16083182 None:intergenic
ATGTAGTTTCATTTATAGCT+TGG 0.465153 8_3:-16085547 None:intergenic
AGAAATATAGATAAGCTTAT+GGG 0.467434 8_3:-16090418 None:intergenic
GCTATAAATGAAACTACATC+CGG 0.467940 8_3:+16085551 Msa1279210:CDS
AAAATGCAGAAGAAATGGAT+TGG 0.476289 8_3:+16090032 Msa1279210:intron
GAAGAAGTGTTTCAGTAAGC+TGG 0.478339 8_3:+16084646 Msa1279210:CDS
ATGGGAGGTGCAATGGGAAA+GGG 0.479453 8_3:+16083753 Msa1279210:CDS
GATACTGCATGAAGTGCTGC+AGG 0.484247 8_3:-16084794 None:intergenic
GATGGGAGGTGCAATGGGAA+AGG 0.497322 8_3:+16083752 Msa1279210:exon
AAATGCAGAAGAAATGGATT+GGG 0.498895 8_3:+16090033 Msa1279210:intron
AACATTTCTGAGACGCACTT+TGG 0.500090 8_3:+16083716 Msa1279210:five_prime_UTR
GGTTGGAATTGATGAATTTG+AGG 0.500253 8_3:+16090108 Msa1279210:CDS
GAAGAGTGGAGATCGAAAGA+AGG 0.502730 8_3:-16083168 None:intergenic
GGAGGCCACATTTGAGACAT+TGG 0.509823 8_3:+16085463 Msa1279210:CDS
GATAAGCTTATGGGAACTAG+AGG 0.510875 8_3:-16090409 None:intergenic
TTGGCGATGGGAGGTGCAAT+GGG 0.518653 8_3:+16083747 Msa1279210:exon
TTTGGTTGATTGATTGGCGA+TGG 0.520766 8_3:+16083734 Msa1279210:exon
TTCGCATTTACACGGTGGGT+TGG 0.523575 8_3:+16090091 Msa1279210:CDS
ATTGGCGATGGGAGGTGCAA+TGG 0.524730 8_3:+16083746 Msa1279210:exon
AATTGATGAATTTGAGGACG+AGG 0.525205 8_3:+16090114 Msa1279210:CDS
ATGAGAGCTTCAGAAAATGC+AGG 0.530176 8_3:+16083910 Msa1279210:CDS
CCTACCAAACTGCTCAAAGA+TGG 0.539084 8_3:-16083934 None:intergenic
AGGAGGTGGTGATGTGATGA+TGG 0.539977 8_3:-16083096 None:intergenic
ATAAAGAGAGTACCTAAAGT+TGG 0.547554 8_3:-16083207 None:intergenic
TTGGTTGATTGATTGGCGAT+GGG 0.555589 8_3:+16083735 Msa1279210:exon
TTCTTAGACAAGAATAAGGA+CGG 0.561005 8_3:+16085500 Msa1279210:CDS
TCTTCCAGAAGAACGTTCCC+CGG 0.576812 8_3:-16085570 None:intergenic
CTATAAATGAAACTACATCC+GGG 0.577846 8_3:+16085552 Msa1279210:CDS
AGAGAGTACCTAAAGTTGGT+AGG 0.579436 8_3:-16083203 None:intergenic
TATGGGAACTAGAGGGAGAG+AGG 0.595309 8_3:-16090401 None:intergenic
TCATCATAGTAATTAGGAGG+TGG 0.598060 8_3:-16083110 None:intergenic
CTGCAGGGTCATCTTTGAGA+AGG 0.604557 8_3:-16084778 None:intergenic
GTGCTTCAGCCAAAGCAAGA+AGG 0.604966 8_3:+16090210 Msa1279210:three_prime_UTR
GTATCTTCTGCTAATAGAGA+CGG 0.608968 8_3:+16090180 Msa1279210:three_prime_UTR
CAAGCTTGAGGCTAAAATGG+TGG 0.616956 8_3:+16083809 Msa1279210:CDS
TCTTAGACAAGAATAAGGAC+GGG 0.620398 8_3:+16085501 Msa1279210:CDS
GTTGATTGATTGGCGATGGG+AGG 0.623063 8_3:+16083738 Msa1279210:exon
TGGTGGAAGCAATGCAACGG+AGG 0.623952 8_3:+16083826 Msa1279210:CDS
TGAGGACGAGGAAAATGCAT+AGG 0.624859 8_3:+16090126 Msa1279210:CDS
ATCAACCAATGTCTCAAATG+TGG 0.635646 8_3:-16085468 None:intergenic
ATATCATCATAGTAATTAGG+AGG 0.638009 8_3:-16083113 None:intergenic
TGAGAGCTTCAGAAAATGCA+GGG 0.640702 8_3:+16083911 Msa1279210:CDS
AAACCAATACAGATATAAGG+TGG 0.642647 8_3:-16090364 None:intergenic
GGTGGAAGCAATGCAACGGA+GGG 0.644209 8_3:+16083827 Msa1279210:CDS
AATTGGCATGCCAAATCTGG+AGG 0.644569 8_3:+16085445 Msa1279210:CDS
CGCAGATGAAGATTCTAATG+GGG 0.650490 8_3:+16084604 Msa1279210:intron
ATAAGCTTATGGGAACTAGA+GGG 0.655215 8_3:-16090408 None:intergenic
GGTAGCAGAAACCAAGCTTG+AGG 0.658820 8_3:+16083797 Msa1279210:CDS
TATAAATGAAACTACATCCG+GGG 0.670677 8_3:+16085553 Msa1279210:CDS
AAATGGTGGAAGCAATGCAA+CGG 0.672556 8_3:+16083823 Msa1279210:CDS
ATGCAACGGAGGGAATGTCA+AGG 0.680566 8_3:+16083837 Msa1279210:CDS
ATACTGCATGAAGTGCTGCA+GGG 0.692431 8_3:-16084793 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTAAAATTTCAAAATTAT+AGG - chr8_3:16085271-16085290 None:intergenic 10.0%
!! TAAAAAAAACAATAAAACTT+GGG - chr8_3:16089196-16089215 None:intergenic 10.0%
!! ATAAAAAAAACAATAAAACT+TGG - chr8_3:16089197-16089216 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTAA+AGG + chr8_3:16089710-16089729 Msa1279210:intron 10.0%
!! CTGATATAAATATAGTTTAT+TGG + chr8_3:16084006-16084025 Msa1279210:intron 15.0%
!! ACAATCACATAAAAAAAAAA+TGG - chr8_3:16084442-16084461 None:intergenic 15.0%
!! GTATATATGTTTATTGTAAT+TGG + chr8_3:16084554-16084573 Msa1279210:intron 15.0%
!!! GAATATTATTTGAGTTTAAT+GGG + chr8_3:16084917-16084936 Msa1279210:intron 15.0%
!!! TAACTGCATTTTTAAATTAA+TGG - chr8_3:16085012-16085031 None:intergenic 15.0%
!! GAAAATTACATATTTAATTC+AGG + chr8_3:16085151-16085170 Msa1279210:intron 15.0%
!!! GTTTCTTTTACTATAAATAT+AGG + chr8_3:16086166-16086185 Msa1279210:intron 15.0%
!!! GTTTCTTTTACTATAAATAT+AGG + chr8_3:16086166-16086185 Msa1279210:intron 15.0%
!!! ATATTATTGACCTTTTTTAA+TGG - chr8_3:16089162-16089181 None:intergenic 15.0%
!!! TTATTTACATAGTTTAAAGT+AGG + chr8_3:16089213-16089232 Msa1279210:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8_3:16089388-16089407 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr8_3:16089460-16089479 None:intergenic 15.0%
!!! AATTTTTGCGAAATTTTTTT+CGG - chr8_3:16089544-16089563 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr8_3:16089579-16089598 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + chr8_3:16089738-16089757 Msa1279210:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + chr8_3:16089739-16089758 Msa1279210:intron 15.0%
!!! ATAAGTCAATTTTTTTTTGT+AGG + chr8_3:16089771-16089790 Msa1279210:intron 15.0%
!!! TAAGTCAATTTTTTTTTGTA+GGG + chr8_3:16089772-16089791 Msa1279210:intron 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG + chr8_3:16089801-16089820 Msa1279210:intron 15.0%
!!! TATAAGTCAATTTTTTTTGT+AGG + chr8_3:16089873-16089892 Msa1279210:intron 15.0%
!!! ATAAGTCAATTTTTTTTGTA+GGG + chr8_3:16089874-16089893 Msa1279210:intron 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG + chr8_3:16089801-16089820 Msa1279210:intron 15.0%
!! TAATGAATATATACAAACTT+GGG - chr8_3:16089989-16090008 None:intergenic 15.0%
!! TTAATGAATATATACAAACT+TGG - chr8_3:16089990-16090009 None:intergenic 15.0%
!! TTAATCAATCAACTATGTTT+GGG - chr8_3:16083032-16083051 None:intergenic 20.0%
!! AAGATATCATCATAGTAATT+AGG - chr8_3:16083119-16083138 None:intergenic 20.0%
!! ATGTAATTCTTACATAAAGT+AGG + chr8_3:16083427-16083446 Msa1279210:intron 20.0%
!! TAAACATATATACGACAATT+TGG - chr8_3:16084547-16084566 None:intergenic 20.0%
!!! ATGTGATTTTAATGATGATT+TGG + chr8_3:16084712-16084731 Msa1279210:CDS 20.0%
!!! TGTGATTTTAATGATGATTT+GGG + chr8_3:16084713-16084732 Msa1279210:CDS 20.0%
!!! GGAATATTATTTGAGTTTAA+TGG + chr8_3:16084916-16084935 Msa1279210:intron 20.0%
!! TAAAAATGCAGTTATAAAAG+TGG + chr8_3:16085018-16085037 Msa1279210:intron 20.0%
!! AAAAATGCAGTTATAAAAGT+GGG + chr8_3:16085019-16085038 Msa1279210:intron 20.0%
!! CAAAAATAGTATGGATTTAA+AGG - chr8_3:16085112-16085131 None:intergenic 20.0%
!!! TTTTCTAAATAAAATGCAAG+AGG - chr8_3:16085136-16085155 None:intergenic 20.0%
!! TATAAATTATCAACGAAAAC+AGG - chr8_3:16085371-16085390 None:intergenic 20.0%
!!! TTGTTTGTTATTCAATTTAG+AGG - chr8_3:16085771-16085790 None:intergenic 20.0%
!! ATTAGTATAAGCAACATTTA+AGG + chr8_3:16085817-16085836 Msa1279210:intron 20.0%
!!! ATTTTTCAGAAACGTATTTT+TGG + chr8_3:16086117-16086136 Msa1279210:intron 20.0%
!!! TTTTTCAGAAACGTATTTTT+GGG + chr8_3:16086118-16086137 Msa1279210:intron 20.0%
!!! CAGATTTGTTACAATTTTAT+GGG + chr8_3:16086142-16086161 Msa1279210:intron 20.0%
!!! ATTTTTCAGAAACGTATTTT+TGG + chr8_3:16086117-16086136 Msa1279210:intron 20.0%
!!! TTTTTCAGAAACGTATTTTT+GGG + chr8_3:16086118-16086137 Msa1279210:intron 20.0%
!!! CAGATTTGTTACAATTTTAT+GGG + chr8_3:16086142-16086161 Msa1279210:intron 20.0%
!! AAGGTCAATAATATAGATAT+TGG + chr8_3:16089168-16089187 Msa1279210:intron 20.0%
!! AGGTCAATAATATAGATATT+GGG + chr8_3:16089169-16089188 Msa1279210:intron 20.0%
!!! ATCTTGTCTTTATTTTTTCT+TGG + chr8_3:16089313-16089332 Msa1279210:intron 20.0%
!!! TCTTGTCTTTATTTTTTCTT+GGG + chr8_3:16089314-16089333 Msa1279210:intron 20.0%
!!! GAGTATAGAAATTTTTTGTA+GGG - chr8_3:16089417-16089436 None:intergenic 20.0%
!!! TGAGTATAGAAATTTTTTGT+AGG - chr8_3:16089418-16089437 None:intergenic 20.0%
!! GTGTTAAAAACGTTATTAAA+AGG + chr8_3:16089514-16089533 Msa1279210:intron 20.0%
!!! CCATTTTATTTATTTTAGCA+GGG + chr8_3:16089842-16089861 Msa1279210:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG - chr8_3:16089961-16089980 None:intergenic 20.0%
!! AGAAATATAGATAAGCTTAT+GGG - chr8_3:16090421-16090440 None:intergenic 20.0%
!! AAGAAATATAGATAAGCTTA+TGG - chr8_3:16090422-16090441 None:intergenic 20.0%
! GTTAATCAATCAACTATGTT+TGG - chr8_3:16083033-16083052 None:intergenic 25.0%
! ATATCATCATAGTAATTAGG+AGG - chr8_3:16083116-16083135 None:intergenic 25.0%
! ATTATTCATTCTTTGCTCAA+CGG + chr8_3:16083275-16083294 Msa1279210:intron 25.0%
!! TATAGTGTTGAATGATTTCA+TGG - chr8_3:16083868-16083887 None:intergenic 25.0%
!!! CATCAATTTTTGGGAATTTT+AGG - chr8_3:16083893-16083912 None:intergenic 25.0%
! TGATCCTATTGTATAAATTC+AGG - chr8_3:16084032-16084051 None:intergenic 25.0%
!! TTAAGTTGTTTACTCAAACA+CGG - chr8_3:16084089-16084108 None:intergenic 25.0%
!!! TAAGCTATTTCTTTAACAGA+AGG + chr8_3:16084159-16084178 Msa1279210:intron 25.0%
! TTTATTTCCATAAACTCTCT+AGG - chr8_3:16084239-16084258 None:intergenic 25.0%
!!! TGCTTTTGAAAACAACTTAT+AGG - chr8_3:16084819-16084838 None:intergenic 25.0%
!! GGTTGATGTTTGAATTATTT+CGG + chr8_3:16084866-16084885 Msa1279210:intron 25.0%
! GTTGATGTTTGAATTATTTC+GGG + chr8_3:16084867-16084886 Msa1279210:intron 25.0%
!! ATACATTTAACTTCAGAGAA+TGG + chr8_3:16084895-16084914 Msa1279210:intron 25.0%
! AATGGTATGACATGAAAAAA+TGG - chr8_3:16084994-16085013 None:intergenic 25.0%
! TATTTAATTCAGGAGATGTT+TGG + chr8_3:16085161-16085180 Msa1279210:intron 25.0%
!! GTTAAGAAGTTTTTCTGTTA+TGG + chr8_3:16085210-16085229 Msa1279210:intron 25.0%
! ATTTGAAAGGATAGAGAAAA+TGG - chr8_3:16085396-16085415 None:intergenic 25.0%
! TGTATTCTTAGACAAGAATA+AGG + chr8_3:16085496-16085515 Msa1279210:CDS 25.0%
! ATGTAGTTTCATTTATAGCT+TGG - chr8_3:16085550-16085569 None:intergenic 25.0%
! TATGTGTGGAATTTAAACAA+GGG - chr8_3:16085628-16085647 None:intergenic 25.0%
! ATATGTGTGGAATTTAAACA+AGG - chr8_3:16085629-16085648 None:intergenic 25.0%
!! ATATGTTTTCACAAGAACAT+TGG + chr8_3:16085742-16085761 Msa1279210:intron 25.0%
!! TATGTTTTCACAAGAACATT+GGG + chr8_3:16085743-16085762 Msa1279210:intron 25.0%
! CCATAAAATTGTAACAAATC+TGG - chr8_3:16086144-16086163 None:intergenic 25.0%
!!! CCAGATTTGTTACAATTTTA+TGG + chr8_3:16086141-16086160 Msa1279210:intron 25.0%
! GTTACAAAAGAGATTTCAAT+GGG - chr8_3:16086400-16086419 None:intergenic 25.0%
! AAAGGATAATCAAGTATCAT+GGG + chr8_3:16086681-16086700 Msa1279210:intron 25.0%
! TTTGTATATGACAAAGTCTT+TGG + chr8_3:16086965-16086984 Msa1279210:intron 25.0%
! TTAAACGATTCAAAAGATCT+AGG - chr8_3:16087155-16087174 None:intergenic 25.0%
! CCATAAAATTGTAACAAATC+TGG - chr8_3:16086144-16086163 None:intergenic 25.0%
!!! CCAGATTTGTTACAATTTTA+TGG + chr8_3:16086141-16086160 Msa1279210:intron 25.0%
! GTTACAAAAGAGATTTCAAT+GGG - chr8_3:16086400-16086419 None:intergenic 25.0%
! CAATTATTGACAAATAGAAC+AGG + chr8_3:16088972-16088991 Msa1279210:intron 25.0%
! ATAGACCTATCCATTAAAAA+AGG + chr8_3:16089149-16089168 Msa1279210:intron 25.0%
!!! ATTGACCTTTTTTAATGGAT+AGG - chr8_3:16089157-16089176 None:intergenic 25.0%
!! TCTTGGGTTAATTATGTTTT+TGG + chr8_3:16089330-16089349 Msa1279210:intron 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr8_3:16089449-16089468 None:intergenic 25.0%
!!! GCCATTTTATTTATTTTAGC+AGG + chr8_3:16089841-16089860 Msa1279210:intron 25.0%
! CCCTGCTAAAATAAATAAAA+TGG - chr8_3:16089845-16089864 None:intergenic 25.0%
!!! TGTTTTTGGTCTCTATAAAA+TGG - chr8_3:16089947-16089966 None:intergenic 25.0%
! AAGAAACCAATACAGATATA+AGG - chr8_3:16090370-16090389 None:intergenic 25.0%
!! TATAAAGCTATAAGCTTGTT+TGG + chr8_3:16090451-16090470 Msa1279210:three_prime_UTR 25.0%
!! TATAAGCTTGTTTGGAATAT+AGG + chr8_3:16090459-16090478 Msa1279210:three_prime_UTR 25.0%
!!! GTGTTTTAGTTTTGGAAGAA+AGG - chr8_3:16083077-16083096 None:intergenic 30.0%
!!! TGATGATGGTGTTTTAGTTT+TGG - chr8_3:16083085-16083104 None:intergenic 30.0%
!! ATAAAGAGAGTACCTAAAGT+TGG - chr8_3:16083210-16083229 None:intergenic 30.0%
!! AAGTAGGTCTTGTGTATTTT+TGG + chr8_3:16083443-16083462 Msa1279210:intron 30.0%
! TTTTGGATTGTCCTTCAATT+TGG + chr8_3:16083460-16083479 Msa1279210:intron 30.0%
TGAGTTTCAGAAAATTACAC+TGG + chr8_3:16083549-16083568 Msa1279210:intron 30.0%
TATGATCTATCTTGGATTGA+CGG - chr8_3:16083637-16083656 None:intergenic 30.0%
ATAAGACCTATGATCTATCT+TGG - chr8_3:16083645-16083664 None:intergenic 30.0%
! AAAATCAATTGTTGCTTACG+AGG + chr8_3:16083684-16083703 Msa1279210:intron 30.0%
! TGAATCACCCAAAAAGTTTT+GGG + chr8_3:16083776-16083795 Msa1279210:CDS 30.0%
! TGAAGCTCTCATCAATTTTT+GGG - chr8_3:16083902-16083921 None:intergenic 30.0%
TTGGCCTGAATTTATACAAT+AGG + chr8_3:16084025-16084044 Msa1279210:intron 30.0%
ATATAAGCACTTACATCACA+TGG - chr8_3:16084138-16084157 None:intergenic 30.0%
! ATAAACTGAAAACCAGCTTT+TGG + chr8_3:16084254-16084273 Msa1279210:intron 30.0%
CAATTATCAAGCTCATTCAA+AGG + chr8_3:16084467-16084486 Msa1279210:intron 30.0%
ATAATTCAAACATCAACCAG+AGG - chr8_3:16084864-16084883 None:intergenic 30.0%
! CTAATTTACACCGACATTTT+AGG - chr8_3:16084943-16084962 None:intergenic 30.0%
TTATAAAAGTGGGATGATGT+GGG + chr8_3:16085029-16085048 Msa1279210:intron 30.0%
GTCATAGAGAACAATTTGAA+AGG - chr8_3:16085409-16085428 None:intergenic 30.0%
TTCTTAGACAAGAATAAGGA+CGG + chr8_3:16085500-16085519 Msa1279210:CDS 30.0%
GTATGTCAGCAAAAATGAAA+TGG + chr8_3:16085523-16085542 Msa1279210:CDS 30.0%
GCTATAAATGAAACTACATC+CGG + chr8_3:16085551-16085570 Msa1279210:CDS 30.0%
CTATAAATGAAACTACATCC+GGG + chr8_3:16085552-16085571 Msa1279210:CDS 30.0%
TATAAATGAAACTACATCCG+GGG + chr8_3:16085553-16085572 Msa1279210:CDS 30.0%
AGAATAGCCATGAAAAGATT+TGG + chr8_3:16085590-16085609 Msa1279210:CDS 30.0%
TTGTGAAAGTGACTCAAAAT+TGG + chr8_3:16085940-16085959 Msa1279210:intron 30.0%
! CTTTCAGCAAACATCAATTT+TGG - chr8_3:16085976-16085995 None:intergenic 30.0%
! TGTTTGCTGAAAGTACAAAT+CGG + chr8_3:16085983-16086002 Msa1279210:intron 30.0%
TCTCAAAATAGTCTGATACA+AGG - chr8_3:16086192-16086211 None:intergenic 30.0%
!! ACTATTTTGAGAGAGAAAGA+GGG + chr8_3:16086200-16086219 Msa1279210:intron 30.0%
AAGGGTTTAGAAATCAAACT+AGG + chr8_3:16086232-16086251 Msa1279210:intron 30.0%
AGGGTTTAGAAATCAAACTA+GGG + chr8_3:16086233-16086252 Msa1279210:intron 30.0%
TTTGTATAGAGTTTGTCTCT+TGG + chr8_3:16086256-16086275 Msa1279210:intron 30.0%
CGTTACAAAAGAGATTTCAA+TGG - chr8_3:16086401-16086420 None:intergenic 30.0%
TAACGTTACTCATCATATAG+TGG + chr8_3:16086416-16086435 Msa1279210:intron 30.0%
! TTACTCATCATATAGTGGAA+CGG + chr8_3:16086421-16086440 Msa1279210:intron 30.0%
!! TGTTCCATACACTTTGATTT+TGG + chr8_3:16086562-16086581 Msa1279210:intron 30.0%
CAAAGGATAATCAAGTATCA+TGG + chr8_3:16086680-16086699 Msa1279210:intron 30.0%
TTTAAAGATACCATGCTCTA+TGG + chr8_3:16087170-16087189 Msa1279210:intron 30.0%
! ATGCTTTAAGTGTAACAAGA+TGG + chr8_3:16087364-16087383 Msa1279210:intron 30.0%
! TGCTTTAAGTGTAACAAGAT+GGG + chr8_3:16087365-16087384 Msa1279210:intron 30.0%
TAAGAATACTCATGATCTAC+CGG + chr8_3:16087590-16087609 Msa1279210:intron 30.0%
! CAAACTACTCAAGGAATTTT+AGG - chr8_3:16088020-16088039 None:intergenic 30.0%
ACCTTAATCTCTTCAATCAT+CGG - chr8_3:16088076-16088095 None:intergenic 30.0%
TTGTGAAAGTGACTCAAAAT+TGG + chr8_3:16085940-16085959 Msa1279210:intron 30.0%
! CTTTCAGCAAACATCAATTT+TGG - chr8_3:16085976-16085995 None:intergenic 30.0%
! TGTTTGCTGAAAGTACAAAT+CGG + chr8_3:16085983-16086002 Msa1279210:intron 30.0%
TCTCAAAATAGTCTGATACA+AGG - chr8_3:16086192-16086211 None:intergenic 30.0%
!! ACTATTTTGAGAGAGAAAGA+GGG + chr8_3:16086200-16086219 Msa1279210:intron 30.0%
AAGGGTTTAGAAATCAAACT+AGG + chr8_3:16086232-16086251 Msa1279210:intron 30.0%
AGGGTTTAGAAATCAAACTA+GGG + chr8_3:16086233-16086252 Msa1279210:intron 30.0%
TTTGTATAGAGTTTGTCTCT+TGG + chr8_3:16086256-16086275 Msa1279210:intron 30.0%
CGTTACAAAAGAGATTTCAA+TGG - chr8_3:16086401-16086420 None:intergenic 30.0%
TAACGTTACTCATCATATAG+TGG + chr8_3:16086416-16086435 Msa1279210:intron 30.0%
! TTACTCATCATATAGTGGAA+CGG + chr8_3:16086421-16086440 Msa1279210:intron 30.0%
!! TGTTCCATACACTTTGATTT+TGG + chr8_3:16086562-16086581 Msa1279210:intron 30.0%
GTTGAAATTAACCAAGTGAT+TGG + chr8_3:16088928-16088947 Msa1279210:intron 30.0%
!!! TTTATTTTGTCTTCACCCTT+CGG - chr8_3:16089096-16089115 None:intergenic 30.0%
!!! TTTTAGGATGAGTATGATGA+AGG - chr8_3:16089248-16089267 None:intergenic 30.0%
! TCAACTTTCAATGGAGTTTT+AGG - chr8_3:16089264-16089283 None:intergenic 30.0%
! GTACTAGTTTCAACTTTCAA+TGG - chr8_3:16089273-16089292 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr8_3:16089373-16089392 None:intergenic 30.0%
!!! TTTTGCGAAATTTTTTTCGG+AGG - chr8_3:16089541-16089560 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr8_3:16089676-16089695 None:intergenic 30.0%
AAGTAAGGACTAAACTTAGA+AGG + chr8_3:16089816-16089835 Msa1279210:intron 30.0%
ACAAACTTGGGAAGAAAAAA+GGG - chr8_3:16089977-16089996 None:intergenic 30.0%
TACAAACTTGGGAAGAAAAA+AGG - chr8_3:16089978-16089997 None:intergenic 30.0%
! AATCCATTTCTTCTGCATTT+TGG - chr8_3:16090033-16090052 None:intergenic 30.0%
AAAATGCAGAAGAAATGGAT+TGG + chr8_3:16090032-16090051 Msa1279210:intron 30.0%
! AAATGCAGAAGAAATGGATT+GGG + chr8_3:16090033-16090052 Msa1279210:intron 30.0%
!! GAAATGGATTGGGATAAAAA+TGG + chr8_3:16090043-16090062 Msa1279210:CDS 30.0%
AAATGGAATGGTGAACTTTA+AGG + chr8_3:16090060-16090079 Msa1279210:CDS 30.0%
! AGTTTCTTTTCGCATTTACA+CGG + chr8_3:16090083-16090102 Msa1279210:CDS 30.0%
ACATTAAGATGACATCATTC+AGG - chr8_3:16090152-16090171 None:intergenic 30.0%
TGATGTCATCTTAATGTCTT+TGG + chr8_3:16090155-16090174 Msa1279210:three_prime_UTR 30.0%
CCTTTATTACAAGTGAAAAC+TGG - chr8_3:16090241-16090260 None:intergenic 30.0%
! CCAGTTTTCACTTGTAATAA+AGG + chr8_3:16090238-16090257 Msa1279210:three_prime_UTR 30.0%
AAACCAATACAGATATAAGG+TGG - chr8_3:16090367-16090386 None:intergenic 30.0%
TCATCATAGTAATTAGGAGG+TGG - chr8_3:16083113-16083132 None:intergenic 35.0%
ATTTCTCTCCTACCAACTTT+AGG + chr8_3:16083195-16083214 Msa1279210:five_prime_UTR 35.0%
CCACGAAAGATTACAAGAAA+TGG - chr8_3:16083326-16083345 None:intergenic 35.0%
CCATTTCTTGTAATCTTTCG+TGG + chr8_3:16083323-16083342 Msa1279210:intron 35.0%
CTTCAATTTGGCAGAAATTG+CGG + chr8_3:16083472-16083491 Msa1279210:intron 35.0%
GTCAATCCAAGATAGATCAT+AGG + chr8_3:16083636-16083655 Msa1279210:intron 35.0%
! GTGAATCACCCAAAAAGTTT+TGG + chr8_3:16083775-16083794 Msa1279210:CDS 35.0%
! TCTGCTACCCAAAACTTTTT+GGG - chr8_3:16083786-16083805 None:intergenic 35.0%
! TTCTGCTACCCAAAACTTTT+TGG - chr8_3:16083787-16083806 None:intergenic 35.0%
! CTGAAGCTCTCATCAATTTT+TGG - chr8_3:16083903-16083922 None:intergenic 35.0%
GGTAGGTTTCTACTTCAAAT+TGG + chr8_3:16083951-16083970 Msa1279210:intron 35.0%
!! GCTACTTCTTGCTTTTACTT+TGG - chr8_3:16084057-16084076 None:intergenic 35.0%
AAGCTATCCTAGAGAGTTTA+TGG + chr8_3:16084229-16084248 Msa1279210:intron 35.0%
! ACATTGATTGAGAGAGCTTA+TGG - chr8_3:16084298-16084317 None:intergenic 35.0%
ACTGACATAAGCACTTGTTT+GGG - chr8_3:16084321-16084340 None:intergenic 35.0%
TACTGACATAAGCACTTGTT+TGG - chr8_3:16084322-16084341 None:intergenic 35.0%
CATTAACCTATGTTTGTCAC+CGG + chr8_3:16084510-16084529 Msa1279210:intron 35.0%
! GCTGGAAATTTCTTTTTCTG+AGG + chr8_3:16084664-16084683 Msa1279210:CDS 35.0%
! GTTTAATGGGCCTAAAATGT+CGG + chr8_3:16084930-16084949 Msa1279210:intron 35.0%
AAAAAATGGAGGACTCTCAT+TGG - chr8_3:16084980-16084999 None:intergenic 35.0%
GGTATGACATGAAAAAATGG+AGG - chr8_3:16084991-16085010 None:intergenic 35.0%
GTTATAAAAGTGGGATGATG+TGG + chr8_3:16085028-16085047 Msa1279210:intron 35.0%
GCAAGAGGACAAAAATAGTA+TGG - chr8_3:16085121-16085140 None:intergenic 35.0%
CTTGTCTAGAAATCACGAAT+TGG + chr8_3:16085428-16085447 Msa1279210:intron 35.0%
ATCAACCAATGTCTCAAATG+TGG - chr8_3:16085471-16085490 None:intergenic 35.0%
TCTTAGACAAGAATAAGGAC+GGG + chr8_3:16085501-16085520 Msa1279210:CDS 35.0%
! CAACTGACCAAATCTTTTCA+TGG - chr8_3:16085600-16085619 None:intergenic 35.0%
TAAGGAACTCAGAACATAGT+AGG + chr8_3:16085835-16085854 Msa1279210:intron 35.0%
AAGGAACTCAGAACATAGTA+GGG + chr8_3:16085836-16085855 Msa1279210:intron 35.0%
GTATTCCTCATATTGTGTGT+AGG + chr8_3:16085869-16085888 Msa1279210:intron 35.0%
AGTGACTCAAAATTGGAGTT+TGG + chr8_3:16085947-16085966 Msa1279210:intron 35.0%
! GTTTTCTGTTCGGGAAAAAT+CGG + chr8_3:16086053-16086072 Msa1279210:intron 35.0%
AAAATAACAGCACGCGAAAT+CGG - chr8_3:16086102-16086121 None:intergenic 35.0%
!! GACTATTTTGAGAGAGAAAG+AGG + chr8_3:16086199-16086218 Msa1279210:intron 35.0%
!! CTATTTTGAGAGAGAAAGAG+GGG + chr8_3:16086201-16086220 Msa1279210:intron 35.0%
!! TATTTTGAGAGAGAAAGAGG+GGG + chr8_3:16086202-16086221 Msa1279210:intron 35.0%
! TTTGAAGGTTGATTCACCTT+GGG + chr8_3:16086292-16086311 Msa1279210:intron 35.0%
AATCCTAATAGTGTTTCCCA+AGG - chr8_3:16086311-16086330 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr8_3:16086319-16086338 Msa1279210:intron 35.0%
!! AAGAATTTGTTGACCCAGTT+CGG - chr8_3:16086483-16086502 None:intergenic 35.0%
!!! TCGCTGTTGTTTTCTACTTT+TGG + chr8_3:16086525-16086544 Msa1279210:intron 35.0%
GCAACCAAAATCAAAGTGTA+TGG - chr8_3:16086569-16086588 None:intergenic 35.0%
! TCCACACATCAAGTTGTTAT+TGG + chr8_3:16086604-16086623 Msa1279210:intron 35.0%
ACCAATAACAACTTGATGTG+TGG - chr8_3:16086608-16086627 None:intergenic 35.0%
TTCATCGAATTCGCAACAAT+TGG + chr8_3:16086636-16086655 Msa1279210:intron 35.0%
AAGTATCATGGGTTCAAAGT+GGG + chr8_3:16086692-16086711 Msa1279210:intron 35.0%
TGGGATATTGAGAAGTTTAC+CGG + chr8_3:16086711-16086730 Msa1279210:intron 35.0%
!!! TAACGATTTTGGGTTATGGA+AGG + chr8_3:16086737-16086756 Msa1279210:intron 35.0%
!! AAGTGTGAGAAAGCTTTGAA+GGG + chr8_3:16086789-16086808 Msa1279210:intron 35.0%
!!! AGTTTTGAGAGAAGTAGCAA+AGG + chr8_3:16086905-16086924 Msa1279210:intron 35.0%
!! ATGAGTAGAGTTGTTGCTTT+AGG - chr8_3:16087004-16087023 None:intergenic 35.0%
ACAACTCTACTCATTCAAGA+TGG + chr8_3:16087010-16087029 Msa1279210:intron 35.0%
! CAACAAAATCCTTGATGACT+TGG + chr8_3:16087070-16087089 Msa1279210:intron 35.0%
CAATATTCTCCAAGTCATCA+AGG - chr8_3:16087082-16087101 None:intergenic 35.0%
! TGATGACTTGGAGAATATTG+AGG + chr8_3:16087082-16087101 Msa1279210:intron 35.0%
GAATATTGAGGTGAATCTTG+AGG + chr8_3:16087094-16087113 Msa1279210:intron 35.0%
!! GACTTGAGAGTTGATGAAAA+CGG + chr8_3:16087263-16087282 Msa1279210:intron 35.0%
!! ACTTGAGAGTTGATGAAAAC+GGG + chr8_3:16087264-16087283 Msa1279210:intron 35.0%
ACGGAATTACCATTAATCTC+CGG - chr8_3:16087410-16087429 None:intergenic 35.0%
! AAGGGTTTTCTTCATGAAGA+CGG + chr8_3:16087756-16087775 Msa1279210:intron 35.0%
AGGTTGAAGAATGTATAGCA+CGG + chr8_3:16087791-16087810 Msa1279210:intron 35.0%
GAATTACCCTAAAAGTCCAA+GGG + chr8_3:16087820-16087839 Msa1279210:intron 35.0%
CAAACTACACTAGGAATTTC+AGG - chr8_3:16087924-16087943 None:intergenic 35.0%
CTGAAATTCCTAGTGTAGTT+TGG + chr8_3:16087922-16087941 Msa1279210:intron 35.0%
TTGAACACAAGGATCTTCAA+AGG + chr8_3:16088037-16088056 Msa1279210:intron 35.0%
TGAACACAAGGATCTTCAAA+GGG + chr8_3:16088038-16088057 Msa1279210:intron 35.0%
TCCGATGATTGAAGAGATTA+AGG + chr8_3:16088072-16088091 Msa1279210:intron 35.0%
GAGATTAAGGTGTAAACTTG+TGG + chr8_3:16088085-16088104 Msa1279210:intron 35.0%
!! AGCAAGGTGTTGATGTTAAA+TGG + chr8_3:16088143-16088162 Msa1279210:intron 35.0%
!! GCAAGGTGTTGATGTTAAAT+GGG + chr8_3:16088144-16088163 Msa1279210:intron 35.0%
AATGGGCATCATCACTAATT+TGG + chr8_3:16088161-16088180 Msa1279210:intron 35.0%
! TCATCACTAATTTGGAGTCA+AGG + chr8_3:16088169-16088188 Msa1279210:intron 35.0%
AGTGACTCAAAATTGGAGTT+TGG + chr8_3:16085947-16085966 Msa1279210:intron 35.0%
! GTTTTCTGTTCGGGAAAAAT+CGG + chr8_3:16086053-16086072 Msa1279210:intron 35.0%
AAAATAACAGCACGCGAAAT+CGG - chr8_3:16086102-16086121 None:intergenic 35.0%
!! GACTATTTTGAGAGAGAAAG+AGG + chr8_3:16086199-16086218 Msa1279210:intron 35.0%
!! CTATTTTGAGAGAGAAAGAG+GGG + chr8_3:16086201-16086220 Msa1279210:intron 35.0%
!! TATTTTGAGAGAGAAAGAGG+GGG + chr8_3:16086202-16086221 Msa1279210:intron 35.0%
! TTTGAAGGTTGATTCACCTT+GGG + chr8_3:16086292-16086311 Msa1279210:intron 35.0%
AATCCTAATAGTGTTTCCCA+AGG - chr8_3:16086311-16086330 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG + chr8_3:16086319-16086338 Msa1279210:intron 35.0%
!! AAGAATTTGTTGACCCAGTT+CGG - chr8_3:16086483-16086502 None:intergenic 35.0%
!!! TCGCTGTTGTTTTCTACTTT+TGG + chr8_3:16086525-16086544 Msa1279210:intron 35.0%
GCAACCAAAATCAAAGTGTA+TGG - chr8_3:16086569-16086588 None:intergenic 35.0%
! TCCACACATCAAGTTGTTAT+TGG + chr8_3:16086604-16086623 Msa1279210:intron 35.0%
ACCAATAACAACTTGATGTG+TGG - chr8_3:16086608-16086627 None:intergenic 35.0%
TGGTTAGTAAATTCTGACCA+AGG - chr8_3:16089030-16089049 None:intergenic 35.0%
! GTAAATGGGCTTTCATAATC+CGG - chr8_3:16089065-16089084 None:intergenic 35.0%
CTTCGGTTCTTAGAGTAAAT+GGG - chr8_3:16089079-16089098 None:intergenic 35.0%
! CATTTACTCTAAGAACCGAA+GGG + chr8_3:16089078-16089097 Msa1279210:intron 35.0%
! TTACAAGGTCGCAATTTTGT+GGG - chr8_3:16089358-16089377 None:intergenic 35.0%
!! TTTCTTCTGCATTTTGGCAA+AGG - chr8_3:16090027-16090046 None:intergenic 35.0%
TTGCCAAAATGCAGAAGAAA+TGG + chr8_3:16090027-16090046 Msa1279210:intron 35.0%
GGATTGGGATAAAAATGGAA+TGG + chr8_3:16090048-16090067 Msa1279210:CDS 35.0%
GGTTGGAATTGATGAATTTG+AGG + chr8_3:16090108-16090127 Msa1279210:CDS 35.0%
AATTGATGAATTTGAGGACG+AGG + chr8_3:16090114-16090133 Msa1279210:CDS 35.0%
GTATCTTCTGCTAATAGAGA+CGG + chr8_3:16090180-16090199 Msa1279210:three_prime_UTR 35.0%
GATATAAGGTGGCATTTAAC+AGG - chr8_3:16090356-16090375 None:intergenic 35.0%
ATGCCACCTTATATCTGTAT+TGG + chr8_3:16090361-16090380 Msa1279210:three_prime_UTR 35.0%
ATAAGCTTATGGGAACTAGA+GGG - chr8_3:16090411-16090430 None:intergenic 35.0%
GGAGAGAAATTAGTGAAGAG+TGG - chr8_3:16083185-16083204 None:intergenic 40.0%
!! AGAGAGTACCTAAAGTTGGT+AGG - chr8_3:16083206-16083225 None:intergenic 40.0%
CGCAATTTCTGCCAAATTGA+AGG - chr8_3:16083474-16083493 None:intergenic 40.0%
! AGCTTTTGGCAAAATGAGGA+TGG - chr8_3:16083502-16083521 None:intergenic 40.0%
! GTGTAGCTTTTGGCAAAATG+AGG - chr8_3:16083506-16083525 None:intergenic 40.0%
! CATGCACTAAGTGTAGCTTT+TGG - chr8_3:16083516-16083535 None:intergenic 40.0%
AGCTACACTTAGTGCATGTT+TGG + chr8_3:16083518-16083537 Msa1279210:intron 40.0%
TCAGAAAATTACACTGGCAG+TGG + chr8_3:16083555-16083574 Msa1279210:intron 40.0%
! ATTGTTGCTTACGAGGTACT+AGG + chr8_3:16083691-16083710 Msa1279210:intron 40.0%
!! AACATTTCTGAGACGCACTT+TGG + chr8_3:16083716-16083735 Msa1279210:five_prime_UTR 40.0%
ACGCACTTTGGTTGATTGAT+TGG + chr8_3:16083728-16083747 Msa1279210:five_prime_UTR 40.0%
TTTGGTTGATTGATTGGCGA+TGG + chr8_3:16083734-16083753 Msa1279210:exon 40.0%
TTGGTTGATTGATTGGCGAT+GGG + chr8_3:16083735-16083754 Msa1279210:exon 40.0%
AACCAAGCTTGAGGCTAAAA+TGG + chr8_3:16083806-16083825 Msa1279210:CDS 40.0%
! AAATGGTGGAAGCAATGCAA+CGG + chr8_3:16083823-16083842 Msa1279210:CDS 40.0%
ATGAGAGCTTCAGAAAATGC+AGG + chr8_3:16083910-16083929 Msa1279210:CDS 40.0%
TGAGAGCTTCAGAAAATGCA+GGG + chr8_3:16083911-16083930 Msa1279210:CDS 40.0%
TCATTCAAAGGCTTCAACAG+TGG + chr8_3:16084479-16084498 Msa1279210:intron 40.0%
CCCATTAGAATCTTCATCTG+CGG - chr8_3:16084606-16084625 None:intergenic 40.0%
CCGCAGATGAAGATTCTAAT+GGG + chr8_3:16084603-16084622 Msa1279210:intron 40.0%
CGCAGATGAAGATTCTAATG+GGG + chr8_3:16084604-16084623 Msa1279210:intron 40.0%
!! GAAGAAGTGTTTCAGTAAGC+TGG + chr8_3:16084646-16084665 Msa1279210:CDS 40.0%
CTGAAGCAATGCAATGTAGT+AGG + chr8_3:16085318-16085337 Msa1279210:intron 40.0%
AGCAATGCAATGTAGTAGGA+AGG + chr8_3:16085322-16085341 Msa1279210:intron 40.0%
TGTGTTCAAGCAAGCTTGAA+TGG - chr8_3:16085663-16085682 None:intergenic 40.0%
AACACACACATGCTCATCTT+AGG + chr8_3:16085677-16085696 Msa1279210:intron 40.0%
GACAACCTACACACAATATG+AGG - chr8_3:16085877-16085896 None:intergenic 40.0%
GACTCAAAATTGGAGTTTGG+AGG + chr8_3:16085950-16085969 Msa1279210:intron 40.0%
! TTGCTGAAAGTACAAATCGG+TGG + chr8_3:16085986-16086005 Msa1279210:intron 40.0%
!! CTTTTGGGAGGTTTTCTGTT+CGG + chr8_3:16086043-16086062 Msa1279210:intron 40.0%
!! TTTTGGGAGGTTTTCTGTTC+GGG + chr8_3:16086044-16086063 Msa1279210:intron 40.0%
TTGTCTCTTGGCAACAAACT+AGG + chr8_3:16086268-16086287 Msa1279210:intron 40.0%
TGTCTCTTGGCAACAAACTA+GGG + chr8_3:16086269-16086288 Msa1279210:intron 40.0%
! GTTTGAAGGTTGATTCACCT+TGG + chr8_3:16086291-16086310 Msa1279210:intron 40.0%
TCACCTTGGGAAACACTATT+AGG + chr8_3:16086305-16086324 Msa1279210:intron 40.0%
AGGATTGAGTCTCTTGGTTA+CGG + chr8_3:16086325-16086344 Msa1279210:intron 40.0%
! TCATCATATAGTGGAACGGA+GGG + chr8_3:16086425-16086444 Msa1279210:intron 40.0%
GAAAACAACAGCGAGAGAAA+AGG - chr8_3:16086519-16086538 None:intergenic 40.0%
CAAGTATCATGGGTTCAAAG+TGG + chr8_3:16086691-16086710 Msa1279210:intron 40.0%
! TTTACCGGCGATAACGATTT+TGG + chr8_3:16086726-16086745 Msa1279210:intron 40.0%
! TTACCGGCGATAACGATTTT+GGG + chr8_3:16086727-16086746 Msa1279210:intron 40.0%
TAACCCAAAATCGTTATCGC+CGG - chr8_3:16086733-16086752 None:intergenic 40.0%
!!! GCGATAACGATTTTGGGTTA+TGG + chr8_3:16086733-16086752 Msa1279210:intron 40.0%
TGGGTTATGGAAGGTAAAGA+TGG + chr8_3:16086746-16086765 Msa1279210:intron 40.0%
ATGGAAGGTAAAGATGGAAG+CGG + chr8_3:16086752-16086771 Msa1279210:intron 40.0%
! GAAGTGTGAGAAAGCTTTGA+AGG + chr8_3:16086788-16086807 Msa1279210:intron 40.0%
CTCTCAAAACTTTATCTCCG+AGG - chr8_3:16086896-16086915 None:intergenic 40.0%
! TGACAAAGTCTTTGGCTCAT+CGG + chr8_3:16086973-16086992 Msa1279210:intron 40.0%
ACTCTACTCATTCAAGATGG+TGG + chr8_3:16087013-16087032 Msa1279210:intron 40.0%
!! ATTCAAGATGGTGGAGTCAA+AGG + chr8_3:16087022-16087041 Msa1279210:intron 40.0%
ACCATGCTCTATGGAAAAGA+AGG + chr8_3:16087179-16087198 Msa1279210:intron 40.0%
!! AAAAGAAGGCACTGTTACCT+TGG + chr8_3:16087193-16087212 Msa1279210:intron 40.0%
!! CTTGAGAGTTGATGAAAACG+GGG + chr8_3:16087265-16087284 Msa1279210:intron 40.0%
AAGGCCTAAGTGTTTCAAGA+GGG + chr8_3:16087288-16087307 Msa1279210:intron 40.0%
CATTCCCTCTTGAAACACTT+AGG - chr8_3:16087295-16087314 None:intergenic 40.0%
CTAAGTGTTTCAAGAGGGAA+TGG + chr8_3:16087293-16087312 Msa1279210:intron 40.0%
TCTTGTTACTACTCTTTCCC+CGG - chr8_3:16087334-16087353 None:intergenic 40.0%
TCACTTCAAGAAGGATTGTC+CGG + chr8_3:16087388-16087407 Msa1279210:intron 40.0%
AAGGATTGTCCGGAGATTAA+TGG + chr8_3:16087398-16087417 Msa1279210:intron 40.0%
TTCCGTACAAATTGTCTCTG+AGG + chr8_3:16087424-16087443 Msa1279210:intron 40.0%
TCCGTACAAATTGTCTCTGA+GGG + chr8_3:16087425-16087444 Msa1279210:intron 40.0%
ACCCTCAGAGACAATTTGTA+CGG - chr8_3:16087429-16087448 None:intergenic 40.0%
! AATTGTCTCTGAGGGTTATG+AGG + chr8_3:16087433-16087452 Msa1279210:intron 40.0%
TTAAACACTCAACATCAGCC+TGG + chr8_3:16087556-16087575 Msa1279210:intron 40.0%
AGGTTCAAGGAAGACATAGT+GGG + chr8_3:16087622-16087641 Msa1279210:intron 40.0%
! GTACTCATTTGCTAGTTGAG+AGG + chr8_3:16087647-16087666 Msa1279210:intron 40.0%
! TCATTTGCTAGTTGAGAGGT+TGG + chr8_3:16087651-16087670 Msa1279210:intron 40.0%
! GTTTTCTTCATGAAGACGGA+AGG + chr8_3:16087760-16087779 Msa1279210:intron 40.0%
GCTATACATTCTTCAACCTC+CGG - chr8_3:16087790-16087809 None:intergenic 40.0%
GGAATTACCCTAAAAGTCCA+AGG + chr8_3:16087819-16087838 Msa1279210:intron 40.0%
TGTCTCGTATTGAAGAGGTA+TGG + chr8_3:16087880-16087899 Msa1279210:intron 40.0%
CCTTGTATCCAAACTACACT+AGG - chr8_3:16087933-16087952 None:intergenic 40.0%
CCTAGTGTAGTTTGGATACA+AGG + chr8_3:16087930-16087949 Msa1279210:intron 40.0%
CCTTGTGTTCAAACTACTCA+AGG - chr8_3:16088029-16088048 None:intergenic 40.0%
CCTTGAGTAGTTTGAACACA+AGG + chr8_3:16088026-16088045 Msa1279210:intron 40.0%
GAACACAAGGATCTTCAAAG+GGG + chr8_3:16088039-16088058 Msa1279210:intron 40.0%
TGTAAACTTGTGGAGCTACT+CGG + chr8_3:16088095-16088114 Msa1279210:intron 40.0%
! TCACTAATTTGGAGTCAAGG+TGG + chr8_3:16088172-16088191 Msa1279210:intron 40.0%
GACTCAAAATTGGAGTTTGG+AGG + chr8_3:16085950-16085969 Msa1279210:intron 40.0%
! TTGCTGAAAGTACAAATCGG+TGG + chr8_3:16085986-16086005 Msa1279210:intron 40.0%
!! CTTTTGGGAGGTTTTCTGTT+CGG + chr8_3:16086043-16086062 Msa1279210:intron 40.0%
!! TTTTGGGAGGTTTTCTGTTC+GGG + chr8_3:16086044-16086063 Msa1279210:intron 40.0%
TTGTCTCTTGGCAACAAACT+AGG + chr8_3:16086268-16086287 Msa1279210:intron 40.0%
TGTCTCTTGGCAACAAACTA+GGG + chr8_3:16086269-16086288 Msa1279210:intron 40.0%
! GTTTGAAGGTTGATTCACCT+TGG + chr8_3:16086291-16086310 Msa1279210:intron 40.0%
TCACCTTGGGAAACACTATT+AGG + chr8_3:16086305-16086324 Msa1279210:intron 40.0%
AGGATTGAGTCTCTTGGTTA+CGG + chr8_3:16086325-16086344 Msa1279210:intron 40.0%
! TCATCATATAGTGGAACGGA+GGG + chr8_3:16086425-16086444 Msa1279210:intron 40.0%
GAAAACAACAGCGAGAGAAA+AGG - chr8_3:16086519-16086538 None:intergenic 40.0%
ACCAAGTGATTGGACTAAAG+TGG + chr8_3:16088938-16088957 Msa1279210:intron 40.0%
ACCACTTTAGTCCAATCACT+TGG - chr8_3:16088942-16088961 None:intergenic 40.0%
!! ACAAATAGAACAGGAGTACC+CGG + chr8_3:16088981-16089000 Msa1279210:intron 40.0%
GTCAGAATTTACTAACCACC+CGG + chr8_3:16089032-16089051 Msa1279210:intron 40.0%
CCTTCGGTTCTTAGAGTAAA+TGG - chr8_3:16089080-16089099 None:intergenic 40.0%
! CCATTTACTCTAAGAACCGA+AGG + chr8_3:16089077-16089096 Msa1279210:intron 40.0%
AGGATGAGTATGATGAAGGT+TGG - chr8_3:16089244-16089263 None:intergenic 40.0%
! TACAAGGTCGCAATTTTGTG+GGG - chr8_3:16089357-16089376 None:intergenic 40.0%
! CTTACAAGGTCGCAATTTTG+TGG - chr8_3:16089359-16089378 None:intergenic 40.0%
! TTCTTTTCGCATTTACACGG+TGG + chr8_3:16090086-16090105 Msa1279210:CDS 40.0%
! TCTTTTCGCATTTACACGGT+GGG + chr8_3:16090087-16090106 Msa1279210:CDS 40.0%
GATAAGCTTATGGGAACTAG+AGG - chr8_3:16090412-16090431 None:intergenic 40.0%
GAAGAGTGGAGATCGAAAGA+AGG - chr8_3:16083171-16083190 None:intergenic 45.0%
CGACAAAAGCTACACTTGTG+AGG - chr8_3:16083592-16083611 None:intergenic 45.0%
!! CACCATTTTAGCCTCAAGCT+TGG - chr8_3:16083811-16083830 None:intergenic 45.0%
CAAGCTTGAGGCTAAAATGG+TGG + chr8_3:16083809-16083828 Msa1279210:CDS 45.0%
CCTACCAAACTGCTCAAAGA+TGG - chr8_3:16083937-16083956 None:intergenic 45.0%
CCATCTTTGAGCAGTTTGGT+AGG + chr8_3:16083934-16083953 Msa1279210:intron 45.0%
CTTACGACATGTCCAAAAGC+TGG - chr8_3:16084269-16084288 None:intergenic 45.0%
GCCTAGATCATGAAACACTG+CGG + chr8_3:16084371-16084390 Msa1279210:intron 45.0%
CATGAAACACTGCGGCTATT+CGG + chr8_3:16084379-16084398 Msa1279210:intron 45.0%
GCCGCAGATGAAGATTCTAA+TGG + chr8_3:16084602-16084621 Msa1279210:intron 45.0%
!! ATACTGCATGAAGTGCTGCA+GGG - chr8_3:16084796-16084815 None:intergenic 45.0%
GGGATGATGTGGGAAAATAG+TGG + chr8_3:16085039-16085058 Msa1279210:intron 45.0%
ACGAATTGGCATGCCAAATC+TGG + chr8_3:16085442-16085461 Msa1279210:CDS 45.0%
AATTGGCATGCCAAATCTGG+AGG + chr8_3:16085445-16085464 Msa1279210:CDS 45.0%
TCAAATGTGGCCTCCAGATT+TGG - chr8_3:16085458-16085477 None:intergenic 45.0%
TCCCAAAAGGCAGCCAAAAT+CGG - chr8_3:16086032-16086051 None:intergenic 45.0%
CGAACAGAAAACCTCCCAAA+AGG - chr8_3:16086045-16086064 None:intergenic 45.0%
TTCTGTTCGGGAAAAATCGG+TGG + chr8_3:16086056-16086075 Msa1279210:intron 45.0%
GGCAACAAACTAGGGTTTGA+AGG + chr8_3:16086277-16086296 Msa1279210:intron 45.0%
GGATTGAGTCTCTTGGTTAC+GGG + chr8_3:16086326-16086345 Msa1279210:intron 45.0%
GCTGGGATTTGGGTAGAATT+AGG + chr8_3:16086354-16086373 Msa1279210:intron 45.0%
GGGATTTGGGTAGAATTAGG+CGG + chr8_3:16086357-16086376 Msa1279210:intron 45.0%
GGATTTGGGTAGAATTAGGC+GGG + chr8_3:16086358-16086377 Msa1279210:intron 45.0%
! CTCATCATATAGTGGAACGG+AGG + chr8_3:16086424-16086443 Msa1279210:intron 45.0%
CAACTTGATGTGTGGAGCAA+GGG - chr8_3:16086600-16086619 None:intergenic 45.0%
ACAACTTGATGTGTGGAGCA+AGG - chr8_3:16086601-16086620 None:intergenic 45.0%
!! GAGAAAGCTTTGAAGGGTGA+AGG + chr8_3:16086795-16086814 Msa1279210:intron 45.0%
! GCCTTCTTTTCCATAGAGCA+TGG - chr8_3:16087183-16087202 None:intergenic 45.0%
AGCTGCTTGAACTTCTTCCA+AGG - chr8_3:16087213-16087232 None:intergenic 45.0%
!! TCAAGCAGCTTTGAGAACCA+AGG + chr8_3:16087223-16087242 Msa1279210:intron 45.0%
CTTCGACTTAGTCAACTCCT+TGG - chr8_3:16087243-16087262 None:intergenic 45.0%
CAAGGAGTTGACTAAGTCGA+AGG + chr8_3:16087241-16087260 Msa1279210:intron 45.0%
!! AGAGTTGATGAAAACGGGGA+AGG + chr8_3:16087269-16087288 Msa1279210:intron 45.0%
GAAGGCCTAAGTGTTTCAAG+AGG + chr8_3:16087287-16087306 Msa1279210:intron 45.0%
AGTGTTTCAAGAGGGAATGG+TGG + chr8_3:16087296-16087315 Msa1279210:intron 45.0%
CAAGATGGGTCACTTCAAGA+AGG + chr8_3:16087379-16087398 Msa1279210:intron 45.0%
!! TCTGATGGTGTGGTGTTGTT+TGG + chr8_3:16087466-16087485 Msa1279210:intron 45.0%
!! TGGTGTTGTTTGGAGGATGA+AGG + chr8_3:16087476-16087495 Msa1279210:intron 45.0%
TTGGAGGATGAAGGTGATGT+TGG + chr8_3:16087485-16087504 Msa1279210:intron 45.0%
!! ACCTTGGCATTGATGCTTAG+TGG + chr8_3:16087510-16087529 Msa1279210:intron 45.0%
TCCACTAAGCATCAATGCCA+AGG - chr8_3:16087514-16087533 None:intergenic 45.0%
! TACTCATGATCTACCGGTTG+AGG + chr8_3:16087596-16087615 Msa1279210:intron 45.0%
GAGGTTCAAGGAAGACATAG+TGG + chr8_3:16087621-16087640 Msa1279210:intron 45.0%
TTAGGTGGAGTTGAACACAC+CGG + chr8_3:16087684-16087703 Msa1279210:intron 45.0%
TATGCTCTAGTGGTGAGCAA+GGG + chr8_3:16087738-16087757 Msa1279210:intron 45.0%
AGAATGTATAGCACGGCTTG+TGG + chr8_3:16087798-16087817 Msa1279210:intron 45.0%
! CGATCACCCTTGGACTTTTA+GGG - chr8_3:16087829-16087848 None:intergenic 45.0%
CCTAAAAGTCCAAGGGTGAT+CGG + chr8_3:16087827-16087846 Msa1279210:intron 45.0%
CAAGGTGATCTTCAAGGAAG+CGG + chr8_3:16087853-16087872 Msa1279210:intron 45.0%
AAGGTGATCTTCAAGGAAGC+GGG + chr8_3:16087854-16087873 Msa1279210:intron 45.0%
GGAGATGTCTCGTATTGAAG+AGG + chr8_3:16087875-16087894 Msa1279210:intron 45.0%
GGATACAAGGATCTTCGAGA+AGG + chr8_3:16087943-16087962 Msa1279210:intron 45.0%
TACAAGGATCTTCGAGAAGG+CGG + chr8_3:16087946-16087965 Msa1279210:intron 45.0%
ACCTTAACCTCTTCAGCCAT+CGG - chr8_3:16087980-16087999 None:intergenic 45.0%
TCCCAAAAGGCAGCCAAAAT+CGG - chr8_3:16086032-16086051 None:intergenic 45.0%
CGAACAGAAAACCTCCCAAA+AGG - chr8_3:16086045-16086064 None:intergenic 45.0%
TTCTGTTCGGGAAAAATCGG+TGG + chr8_3:16086056-16086075 Msa1279210:intron 45.0%
GGCAACAAACTAGGGTTTGA+AGG + chr8_3:16086277-16086296 Msa1279210:intron 45.0%
GGATTGAGTCTCTTGGTTAC+GGG + chr8_3:16086326-16086345 Msa1279210:intron 45.0%
GCTGGGATTTGGGTAGAATT+AGG + chr8_3:16086354-16086373 Msa1279210:intron 45.0%
GGGATTTGGGTAGAATTAGG+CGG + chr8_3:16086357-16086376 Msa1279210:intron 45.0%
GGATTTGGGTAGAATTAGGC+GGG + chr8_3:16086358-16086377 Msa1279210:intron 45.0%
! CTCATCATATAGTGGAACGG+AGG + chr8_3:16086424-16086443 Msa1279210:intron 45.0%
CAACTTGATGTGTGGAGCAA+GGG - chr8_3:16086600-16086619 None:intergenic 45.0%
ACAACTTGATGTGTGGAGCA+AGG - chr8_3:16086601-16086620 None:intergenic 45.0%
!! CAAATAGAACAGGAGTACCC+GGG + chr8_3:16088982-16089001 Msa1279210:intron 45.0%
TTCCAGTCAGGGTTTAAACC+CGG - chr8_3:16089003-16089022 None:intergenic 45.0%
ACCAAGGATTGTTCCAGTCA+GGG - chr8_3:16089014-16089033 None:intergenic 45.0%
GGCTTTCATAATCCGGAGTT+CGG - chr8_3:16089058-16089077 None:intergenic 45.0%
TGAGGACGAGGAAAATGCAT+AGG + chr8_3:16090126-16090145 Msa1279210:CDS 45.0%
CTGGAATAGCCTTCTTGCTT+TGG - chr8_3:16090222-16090241 None:intergenic 45.0%
!! ATAAATAAATAAAAATGAAA+TGG - chr8_3:16083243-16083262 None:intergenic 5.0%
! AGGAGGTGGTGATGTGATGA+TGG - chr8_3:16083099-16083118 None:intergenic 50.0%
GTTGATTGATTGGCGATGGG+AGG + chr8_3:16083738-16083757 Msa1279210:exon 50.0%
! ATGGGAGGTGCAATGGGAAA+GGG + chr8_3:16083753-16083772 Msa1279210:CDS 50.0%
GGTAGCAGAAACCAAGCTTG+AGG + chr8_3:16083797-16083816 Msa1279210:CDS 50.0%
ATGCAACGGAGGGAATGTCA+AGG + chr8_3:16083837-16083856 Msa1279210:CDS 50.0%
AGGGCCATCTTTGAGCAGTT+TGG + chr8_3:16083930-16083949 Msa1279210:CDS 50.0%
GCCGCAGTGTTTCATGATCT+AGG - chr8_3:16084375-16084394 None:intergenic 50.0%
! CATGTGCCGGTGACAAACAT+AGG - chr8_3:16084519-16084538 None:intergenic 50.0%
CAATTTGGCCATGCATGTGC+CGG - chr8_3:16084532-16084551 None:intergenic 50.0%
! CTGCAGGGTCATCTTTGAGA+AGG - chr8_3:16084781-16084800 None:intergenic 50.0%
!! GATACTGCATGAAGTGCTGC+AGG - chr8_3:16084797-16084816 None:intergenic 50.0%
GTCTTGTGCATTCTGACCTC+TGG + chr8_3:16084845-16084864 Msa1279210:intron 50.0%
! GGAGGCCACATTTGAGACAT+TGG + chr8_3:16085463-16085482 Msa1279210:CDS 50.0%
TCTTCCAGAAGAACGTTCCC+CGG - chr8_3:16085573-16085592 None:intergenic 50.0%
GGCACTTGAGTGCATATGTG+TGG - chr8_3:16085642-16085661 None:intergenic 50.0%
GTACAAATCGGTGGCCGATT+TGG + chr8_3:16085995-16086014 Msa1279210:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG + chr8_3:16086003-16086022 Msa1279210:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG + chr8_3:16086006-16086025 Msa1279210:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG - chr8_3:16086012-16086031 None:intergenic 50.0%
!! GGAAAATCGGTGGCCGATTT+TGG + chr8_3:16086016-16086035 Msa1279210:intron 50.0%
!!! GCCGATTTTGGCTGCCTTTT+GGG + chr8_3:16086028-16086047 Msa1279210:intron 50.0%
!!! GATTTTGGCTGCCTTTTGGG+AGG + chr8_3:16086031-16086050 Msa1279210:intron 50.0%
GGAAAAATCGGTGGCCGATT+TGG + chr8_3:16086065-16086084 Msa1279210:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG + chr8_3:16086003-16086022 Msa1279210:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG + chr8_3:16086006-16086025 Msa1279210:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG - chr8_3:16086012-16086031 None:intergenic 50.0%
AGAAAGAGGGGGCTGAAACA+AGG + chr8_3:16086213-16086232 Msa1279210:intron 50.0%
GAAAGAGGGGGCTGAAACAA+GGG + chr8_3:16086214-16086233 Msa1279210:intron 50.0%
AGTCTCTTGGTTACGGGAAG+AGG + chr8_3:16086332-16086351 Msa1279210:intron 50.0%
TCCCCCAGACTAGGTCAATT+TGG + chr8_3:16086456-16086475 Msa1279210:intron 50.0%
CCCAAATTGACCTAGTCTGG+GGG - chr8_3:16086460-16086479 None:intergenic 50.0%
CCCCCAGACTAGGTCAATTT+GGG + chr8_3:16086457-16086476 Msa1279210:intron 50.0%
GCCCAAATTGACCTAGTCTG+GGG - chr8_3:16086461-16086480 None:intergenic 50.0%
GGCCCAAATTGACCTAGTCT+GGG - chr8_3:16086462-16086481 None:intergenic 50.0%
TAGGTCAATTTGGGCCGAAC+TGG + chr8_3:16086466-16086485 Msa1279210:intron 50.0%
AGGTCAATTTGGGCCGAACT+GGG + chr8_3:16086467-16086486 Msa1279210:intron 50.0%
ATCCTTTGACCTTTGCCCCA+CGG - chr8_3:16086668-16086687 None:intergenic 50.0%
GAAGGGTGAAGGTTCGTTAC+CGG + chr8_3:16086806-16086825 Msa1279210:intron 50.0%
! AGTGCCATTGTCTTGTGCCT+CGG + chr8_3:16086876-16086895 Msa1279210:intron 50.0%
ATCTCCGAGGCACAAGACAA+TGG - chr8_3:16086883-16086902 None:intergenic 50.0%
AGTAGCAAAGGAACCAACCG+CGG + chr8_3:16086917-16086936 Msa1279210:intron 50.0%
GGCCATCATGGAGCAACTTA+CGG + chr8_3:16087043-16087062 Msa1279210:intron 50.0%
CTCCGTAAGTTGCTCCATGA+TGG - chr8_3:16087048-16087067 None:intergenic 50.0%
GTTTCAAGAGGGAATGGTGG+AGG + chr8_3:16087299-16087318 Msa1279210:intron 50.0%
! ATGGTGGAGGTAGAGGTAAC+CGG + chr8_3:16087312-16087331 Msa1279210:intron 50.0%
TCTGAGGGTTATGAGGATGC+AGG + chr8_3:16087440-16087459 Msa1279210:intron 50.0%
!! GATGGTGTGGTGTTGTTTGG+AGG + chr8_3:16087469-16087488 Msa1279210:intron 50.0%
GAAGGTGATGTTGGTCACCT+TGG + chr8_3:16087494-16087513 Msa1279210:intron 50.0%
!! GGCATTGATGCTTAGTGGAG+CGG + chr8_3:16087515-16087534 Msa1279210:intron 50.0%
! TCATGATCTACCGGTTGAGG+TGG + chr8_3:16087599-16087618 Msa1279210:intron 50.0%
GAGGTTGGAAGCTCAGCTTT+AGG + chr8_3:16087666-16087685 Msa1279210:intron 50.0%
!! GTTGGAAGCTCAGCTTTAGG+TGG + chr8_3:16087669-16087688 Msa1279210:intron 50.0%
TAGGTGGAGTTGAACACACC+GGG + chr8_3:16087685-16087704 Msa1279210:intron 50.0%
GTACGACTATGGAGGACCTT+GGG + chr8_3:16087712-16087731 Msa1279210:intron 50.0%
CTATGCTCTAGTGGTGAGCA+AGG + chr8_3:16087737-16087756 Msa1279210:intron 50.0%
!! CATGAAGACGGAAGGCATTC+CGG + chr8_3:16087768-16087787 Msa1279210:intron 50.0%
! CCGATCACCCTTGGACTTTT+AGG - chr8_3:16087830-16087849 None:intergenic 50.0%
CGGATGCAAGGTGATCTTCA+AGG + chr8_3:16087847-16087866 Msa1279210:intron 50.0%
AGACATTCCGATGGCTGAAG+AGG + chr8_3:16087970-16087989 Msa1279210:intron 50.0%
TCCGATGGCTGAAGAGGTTA+AGG + chr8_3:16087976-16087995 Msa1279210:intron 50.0%
CACAAGGATCTTCAAAGGGG+CGG + chr8_3:16088042-16088061 Msa1279210:intron 50.0%
AAGCAAGGGAAAGAGCAGCA+AGG + chr8_3:16088127-16088146 Msa1279210:intron 50.0%
GTACAAATCGGTGGCCGATT+TGG + chr8_3:16085995-16086014 Msa1279210:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG + chr8_3:16086003-16086022 Msa1279210:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG + chr8_3:16086006-16086025 Msa1279210:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG - chr8_3:16086012-16086031 None:intergenic 50.0%
!! GGAAAATCGGTGGCCGATTT+TGG + chr8_3:16086016-16086035 Msa1279210:intron 50.0%
!!! GCCGATTTTGGCTGCCTTTT+GGG + chr8_3:16086028-16086047 Msa1279210:intron 50.0%
!!! GATTTTGGCTGCCTTTTGGG+AGG + chr8_3:16086031-16086050 Msa1279210:intron 50.0%
GGAAAAATCGGTGGCCGATT+TGG + chr8_3:16086065-16086084 Msa1279210:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG + chr8_3:16086003-16086022 Msa1279210:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG + chr8_3:16086006-16086025 Msa1279210:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG - chr8_3:16086012-16086031 None:intergenic 50.0%
AGAAAGAGGGGGCTGAAACA+AGG + chr8_3:16086213-16086232 Msa1279210:intron 50.0%
GAAAGAGGGGGCTGAAACAA+GGG + chr8_3:16086214-16086233 Msa1279210:intron 50.0%
AGTCTCTTGGTTACGGGAAG+AGG + chr8_3:16086332-16086351 Msa1279210:intron 50.0%
TCCCCCAGACTAGGTCAATT+TGG + chr8_3:16086456-16086475 Msa1279210:intron 50.0%
CCCAAATTGACCTAGTCTGG+GGG - chr8_3:16086460-16086479 None:intergenic 50.0%
CCCCCAGACTAGGTCAATTT+GGG + chr8_3:16086457-16086476 Msa1279210:intron 50.0%
GCCCAAATTGACCTAGTCTG+GGG - chr8_3:16086461-16086480 None:intergenic 50.0%
GGCCCAAATTGACCTAGTCT+GGG - chr8_3:16086462-16086481 None:intergenic 50.0%
TAGGTCAATTTGGGCCGAAC+TGG + chr8_3:16086466-16086485 Msa1279210:intron 50.0%
AGGTCAATTTGGGCCGAACT+GGG + chr8_3:16086467-16086486 Msa1279210:intron 50.0%
TCCAGTCAGGGTTTAAACCC+GGG - chr8_3:16089002-16089021 None:intergenic 50.0%
ACCCTGACTGGAACAATCCT+TGG + chr8_3:16089010-16089029 Msa1279210:intron 50.0%
GACCAAGGATTGTTCCAGTC+AGG - chr8_3:16089015-16089034 None:intergenic 50.0%
TTCATAATCCGGAGTTCGGC+CGG - chr8_3:16089054-16089073 None:intergenic 50.0%
TTCGCATTTACACGGTGGGT+TGG + chr8_3:16090091-16090110 Msa1279210:CDS 50.0%
GTGCTTCAGCCAAAGCAAGA+AGG + chr8_3:16090210-16090229 Msa1279210:three_prime_UTR 50.0%
TATGGGAACTAGAGGGAGAG+AGG - chr8_3:16090404-16090423 None:intergenic 50.0%
! ATTGGCGATGGGAGGTGCAA+TGG + chr8_3:16083746-16083765 Msa1279210:exon 55.0%
! TTGGCGATGGGAGGTGCAAT+GGG + chr8_3:16083747-16083766 Msa1279210:exon 55.0%
! GATGGGAGGTGCAATGGGAA+AGG + chr8_3:16083752-16083771 Msa1279210:exon 55.0%
TGGTGGAAGCAATGCAACGG+AGG + chr8_3:16083826-16083845 Msa1279210:CDS 55.0%
GGTGGAAGCAATGCAACGGA+GGG + chr8_3:16083827-16083846 Msa1279210:CDS 55.0%
GTTTGTCACCGGCACATGCA+TGG + chr8_3:16084521-16084540 Msa1279210:intron 55.0%
ACATCCGGGGAACGTTCTTC+TGG + chr8_3:16085566-16085585 Msa1279210:CDS 55.0%
!!! GGCCGATTTTGGCTGCCTTT+TGG + chr8_3:16086027-16086046 Msa1279210:intron 55.0%
TCTTGGTTACGGGAAGAGGC+TGG + chr8_3:16086336-16086355 Msa1279210:intron 55.0%
CTTGGTTACGGGAAGAGGCT+GGG + chr8_3:16086337-16086356 Msa1279210:intron 55.0%
TACGGGAAGAGGCTGGGATT+TGG + chr8_3:16086343-16086362 Msa1279210:intron 55.0%
ACGGGAAGAGGCTGGGATTT+GGG + chr8_3:16086344-16086363 Msa1279210:intron 55.0%
CGGCCCAAATTGACCTAGTC+TGG - chr8_3:16086463-16086482 None:intergenic 55.0%
TTTGACCTTTGCCCCACGGT+GGG - chr8_3:16086664-16086683 None:intergenic 55.0%
!! GAAGACCGAGATGGTGGACA+AGG + chr8_3:16086848-16086867 Msa1279210:intron 55.0%
GCACAAGACAATGGCACTCC+TGG - chr8_3:16086874-16086893 None:intergenic 55.0%
!! GGCATCGATGTGGGCAAAGA+TGG + chr8_3:16086938-16086957 Msa1279210:intron 55.0%
GGTGGAGTCAAAGGCCATCA+TGG + chr8_3:16087031-16087050 Msa1279210:intron 55.0%
! AGAGGGAATGGTGGAGGTAG+AGG + chr8_3:16087305-16087324 Msa1279210:intron 55.0%
TGGTGGAGGTAGAGGTAACC+GGG + chr8_3:16087313-16087332 Msa1279210:intron 55.0%
TGAGGATGCAGGTGCTCTGA+TGG + chr8_3:16087451-16087470 Msa1279210:intron 55.0%
! ATGCAGGTGCTCTGATGGTG+TGG + chr8_3:16087456-16087475 Msa1279210:intron 55.0%
TTAGTGGAGCGGTGATCGTC+TGG + chr8_3:16087526-16087545 Msa1279210:intron 55.0%
CACTCAACATCAGCCTGGAG+AGG + chr8_3:16087561-16087580 Msa1279210:intron 55.0%
TCAACATCAGCCTGGAGAGG+CGG + chr8_3:16087564-16087583 Msa1279210:intron 55.0%
ATTCTTACCACCGCCTCTCC+AGG - chr8_3:16087577-16087596 None:intergenic 55.0%
! TGATCTACCGGTTGAGGTGG+AGG + chr8_3:16087602-16087621 Msa1279210:intron 55.0%
CCTTGAACCTCCACCTCAAC+CGG - chr8_3:16087612-16087631 None:intergenic 55.0%
CTCCATAGTCGTACCACTCC+CGG - chr8_3:16087706-16087725 None:intergenic 55.0%
GGTACGACTATGGAGGACCT+TGG + chr8_3:16087711-16087730 Msa1279210:intron 55.0%
CCACTAGAGCATAGCACCCA+AGG - chr8_3:16087731-16087750 None:intergenic 55.0%
! CCTTGGGTGCTATGCTCTAG+TGG + chr8_3:16087728-16087747 Msa1279210:intron 55.0%
TCCAAGGGTGATCGGATGCA+AGG + chr8_3:16087835-16087854 Msa1279210:intron 55.0%
ACCTTGCATCCGATCACCCT+TGG - chr8_3:16087839-16087858 None:intergenic 55.0%
GAAGGCGGAAGACATTCCGA+TGG + chr8_3:16087961-16087980 Msa1279210:intron 55.0%
AGGATCTTCAAAGGGGCGGA+AGG + chr8_3:16088046-16088065 Msa1279210:intron 55.0%
!!! GGCCGATTTTGGCTGCCTTT+TGG + chr8_3:16086027-16086046 Msa1279210:intron 55.0%
TCTTGGTTACGGGAAGAGGC+TGG + chr8_3:16086336-16086355 Msa1279210:intron 55.0%
CTTGGTTACGGGAAGAGGCT+GGG + chr8_3:16086337-16086356 Msa1279210:intron 55.0%
TACGGGAAGAGGCTGGGATT+TGG + chr8_3:16086343-16086362 Msa1279210:intron 55.0%
ACGGGAAGAGGCTGGGATTT+GGG + chr8_3:16086344-16086363 Msa1279210:intron 55.0%
CGGCCCAAATTGACCTAGTC+TGG - chr8_3:16086463-16086482 None:intergenic 55.0%
ACCCGGGTTTAAACCCTGAC+TGG + chr8_3:16088998-16089017 Msa1279210:intron 55.0%
TCATAATCCGGAGTTCGGCC+GGG - chr8_3:16089053-16089072 None:intergenic 55.0%
CAACAATTGGCGCCCACCGT+GGG + chr8_3:16086649-16086668 Msa1279210:intron 60.0%
AACAATTGGCGCCCACCGTG+GGG + chr8_3:16086650-16086669 Msa1279210:intron 60.0%
CTTTGACCTTTGCCCCACGG+TGG - chr8_3:16086665-16086684 None:intergenic 60.0%
CACCGTGGGGCAAAGGTCAA+AGG + chr8_3:16086663-16086682 Msa1279210:intron 60.0%
ACCGGTCACCATGACACGAG+CGG + chr8_3:16086824-16086843 Msa1279210:intron 60.0%
TCCGCTCGTGTCATGGTGAC+CGG - chr8_3:16086828-16086847 None:intergenic 60.0%
GGTCTTCTCCGCTCGTGTCA+TGG - chr8_3:16086835-16086854 None:intergenic 60.0%
ACGAGCGGAGAAGACCGAGA+TGG + chr8_3:16086839-16086858 Msa1279210:intron 60.0%
AGCGGAGAAGACCGAGATGG+TGG + chr8_3:16086842-16086861 Msa1279210:intron 60.0%
!! CCTGGCCTTGTCCACCATCT+CGG - chr8_3:16086856-16086875 None:intergenic 60.0%
!! AACCAACCGCGGCATCGATG+TGG + chr8_3:16086928-16086947 Msa1279210:intron 60.0%
!! ACCAACCGCGGCATCGATGT+GGG + chr8_3:16086929-16086948 Msa1279210:intron 60.0%
CTTTGCCCACATCGATGCCG+CGG - chr8_3:16086937-16086956 None:intergenic 60.0%
GGTGGAGGTAGAGGTAACCG+GGG + chr8_3:16087314-16087333 Msa1279210:intron 60.0%
CCGGTTGAGGTGGAGGTTCA+AGG + chr8_3:16087609-16087628 Msa1279210:intron 60.0%
GGAGTTGAACACACCGGGAG+TGG + chr8_3:16087690-16087709 Msa1279210:intron 60.0%
CACCGGGAGTGGTACGACTA+TGG + chr8_3:16087701-16087720 Msa1279210:intron 60.0%
CGGGAGTGGTACGACTATGG+AGG + chr8_3:16087704-16087723 Msa1279210:intron 60.0%
!! GAAGACGGAAGGCATTCCGG+AGG + chr8_3:16087771-16087790 Msa1279210:intron 60.0%
TGTGGAGCTACTCGGCGTAG+TGG + chr8_3:16088103-16088122 Msa1279210:intron 60.0%
GTGGAGCTACTCGGCGTAGT+GGG + chr8_3:16088104-16088123 Msa1279210:intron 60.0%
! ACTCGGCGTAGTGGGAAGCA+AGG + chr8_3:16088112-16088131 Msa1279210:intron 60.0%
! CTCGGCGTAGTGGGAAGCAA+GGG + chr8_3:16088113-16088132 Msa1279210:intron 60.0%
GCTGCTCTCTCCCCCAGACT+AGG + chr8_3:16086447-16086466 Msa1279210:intron 65.0%
GCAACAATTGGCGCCCACCG+TGG + chr8_3:16086648-16086667 Msa1279210:intron 65.0%
!! CCGAGATGGTGGACAAGGCC+AGG + chr8_3:16086853-16086872 Msa1279210:intron 65.0%
ACATCAGCCTGGAGAGGCGG+TGG + chr8_3:16087567-16087586 Msa1279210:intron 65.0%
GCTGCTCTCTCCCCCAGACT+AGG + chr8_3:16086447-16086466 Msa1279210:intron 65.0%
CTAACCACCCGGCCGAACTC+CGG + chr8_3:16089043-16089062 Msa1279210:intron 65.0%
TAATCCGGAGTTCGGCCGGG+TGG - chr8_3:16089050-16089069 None:intergenic 65.0%
GCCCACATCGATGCCGCGGT+TGG - chr8_3:16086933-16086952 None:intergenic 70.0%
TGGCGCCCACCGTGGGGCAA+AGG + chr8_3:16086656-16086675 Msa1279210:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 16083000 16090504 16083000 ID=Msa1279210;Name=Msa1279210
chr8_3 mRNA 16083000 16090504 16083000 ID=Msa1279210-mRNA-1;Parent=Msa1279210;Name=Msa1279210-mRNA-1;_AED=0.02;_eAED=0.02;_QI=257|1|1|1|0.75|0.6|5|357|227
chr8_3 exon 16083000 16083216 16083000 ID=Msa1279210-mRNA-1:exon:6228;Parent=Msa1279210-mRNA-1
chr8_3 exon 16083713 16083951 16083713 ID=Msa1279210-mRNA-1:exon:6229;Parent=Msa1279210-mRNA-1
chr8_3 exon 16084609 16084811 16084609 ID=Msa1279210-mRNA-1:exon:6230;Parent=Msa1279210-mRNA-1
chr8_3 exon 16085437 16085611 16085437 ID=Msa1279210-mRNA-1:exon:6231;Parent=Msa1279210-mRNA-1
chr8_3 exon 16090041 16090504 16090041 ID=Msa1279210-mRNA-1:exon:6232;Parent=Msa1279210-mRNA-1
chr8_3 five_prime_UTR 16083000 16083216 16083000 ID=Msa1279210-mRNA-1:five_prime_utr;Parent=Msa1279210-mRNA-1
chr8_3 five_prime_UTR 16083713 16083752 16083713 ID=Msa1279210-mRNA-1:five_prime_utr;Parent=Msa1279210-mRNA-1
chr8_3 CDS 16083753 16083951 16083753 ID=Msa1279210-mRNA-1:cds;Parent=Msa1279210-mRNA-1
chr8_3 CDS 16084609 16084811 16084609 ID=Msa1279210-mRNA-1:cds;Parent=Msa1279210-mRNA-1
chr8_3 CDS 16085437 16085611 16085437 ID=Msa1279210-mRNA-1:cds;Parent=Msa1279210-mRNA-1
chr8_3 CDS 16090041 16090147 16090041 ID=Msa1279210-mRNA-1:cds;Parent=Msa1279210-mRNA-1
chr8_3 three_prime_UTR 16090148 16090504 16090148 ID=Msa1279210-mRNA-1:three_prime_utr;Parent=Msa1279210-mRNA-1
Gene Sequence

>Msa1279210

ATGGGAGGTGCAATGGGAAAGGGTGAATCACCCAAAAAGTTTTGGGTAGCAGAAACCAAGCTTGAGGCTAAAATGGTGGAAGCAATGCAACGGAGGGAATGTCAAGGATGTTCCATGAAATCATTCAACACTATAATCCTAAAATTCCCAAAAATTGATGAGAGCTTCAGAAAATGCAGGGCCATCTTTGAGCAGTTTGATGAAGATTCTAATGGGGCAATAGATCATGAAGAGTTGAAGAAGTGTTTCAGTAAGCTGGAAATTTCTTTTTCTGAGGAAGAGATCAATGATCTTTTTGAAGCATGTGATTTTAATGATGATTTGGGAATGAAGTTCAATGAGTTCATTGTACTTCTTTGTCTTGTCTACCTTCTCAAAGATGACCCTGCAGCACTTCATGCAAAATCACGAATTGGCATGCCAAATCTGGAGGCCACATTTGAGACATTGGTTGATACATTTGTATTCTTAGACAAGAATAAGGACGGGTATGTCAGCAAAAATGAAATGGTCCAAGCTATAAATGAAACTACATCCGGGGAACGTTCTTCTGGAAGAATAGCCATGAAAAGATTTGAAGAAATGGATTGGGATAAAAATGGAATGGTGAACTTTAAGGAGTTTCTTTTCGCATTTACACGGTGGGTTGGAATTGATGAATTTGAGGACGAGGAAAATGCATAG

Protein sequence

>Msa1279210

MGGAMGKGESPKKFWVAETKLEAKMVEAMQRRECQGCSMKSFNTIILKFPKIDESFRKCRAIFEQFDEDSNGAIDHEELKKCFSKLEISFSEEEINDLFEACDFNDDLGMKFNEFIVLLCLVYLLKDDPAALHAKSRIGMPNLEATFETLVDTFVFLDKNKDGYVSKNEMVQAINETTSGERSSGRIAMKRFEEMDWDKNGMVNFKEFLFAFTRWVGIDEFEDEENA*