Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453320 | sp|Q9ZW86|P4H1_ARATH | 68.056 | 216 | 57 | 2 | 4 | 209 | 3 | 216 | 1.55e-104 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453320 | G7IB16 | 96.279 | 215 | 3 | 2 | 1 | 210 | 1 | 215 | 1.56e-147 | 421 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002460 | Msa1453320 | 0.810284 | 1.244477e-50 | -8.615850e-47 |
| Msa0006070 | Msa1453320 | 0.813603 | 2.354048e-51 | -8.615850e-47 |
| Msa0006110 | Msa1453320 | 0.810818 | 9.539234e-51 | -8.615850e-47 |
| Msa0010890 | Msa1453320 | 0.842098 | 3.182155e-58 | -8.615850e-47 |
| Msa0014710 | Msa1453320 | 0.802267 | 6.083900e-49 | -8.615850e-47 |
| Msa0017510 | Msa1453320 | 0.803142 | 4.015046e-49 | -8.615850e-47 |
| Msa0036140 | Msa1453320 | 0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0039330 | Msa1453320 | 0.823676 | 1.218405e-53 | -8.615850e-47 |
| Msa0077400 | Msa1453320 | 0.803322 | 3.684058e-49 | -8.615850e-47 |
| Msa0080090 | Msa1453320 | 0.807254 | 5.529697e-50 | -8.615850e-47 |
| Msa0105060 | Msa1453320 | 0.802554 | 5.310396e-49 | -8.615850e-47 |
| Msa0105070 | Msa1453320 | 0.821671 | 3.566555e-53 | -8.615850e-47 |
| Msa0115270 | Msa1453320 | 0.807966 | 3.904427e-50 | -8.615850e-47 |
| Msa0116770 | Msa1453320 | 0.802496 | 5.458464e-49 | -8.615850e-47 |
| Msa1353470 | Msa1453320 | 0.812333 | 4.469628e-51 | -8.615850e-47 |
| Msa1373030 | Msa1453320 | 0.803883 | 2.817797e-49 | -8.615850e-47 |
| Msa1376890 | Msa1453320 | 0.805429 | 1.340682e-49 | -8.615850e-47 |
| Msa1383100 | Msa1453320 | 0.820777 | 5.732610e-53 | -8.615850e-47 |
| Msa1388930 | Msa1453320 | 0.814598 | 1.419756e-51 | -8.615850e-47 |
| Msa1392240 | Msa1453320 | 0.820553 | 6.456095e-53 | -8.615850e-47 |
| Msa1392260 | Msa1453320 | 0.824728 | 6.898311e-54 | -8.615850e-47 |
| Msa1393410 | Msa1453320 | 0.825505 | 4.519911e-54 | -8.615850e-47 |
| Msa1404520 | Msa1453320 | 0.815364 | 9.603557e-52 | -8.615850e-47 |
| Msa1410680 | Msa1453320 | 0.800282 | 1.550867e-48 | -8.615850e-47 |
| Msa1413650 | Msa1453320 | 0.864374 | 1.273101e-64 | -8.615850e-47 |
| Msa1414520 | Msa1453320 | 0.836414 | 9.491218e-57 | -8.615850e-47 |
| Msa1419960 | Msa1453320 | 0.813526 | 2.448651e-51 | -8.615850e-47 |
| Msa1423880 | Msa1453320 | 0.820165 | 7.923575e-53 | -8.615850e-47 |
| Msa1429900 | Msa1453320 | 0.821457 | 3.997256e-53 | -8.615850e-47 |
| Msa1435160 | Msa1453320 | 0.829019 | 6.506468e-55 | -8.615850e-47 |
| Msa1435420 | Msa1453320 | 0.828652 | 7.982285e-55 | -8.615850e-47 |
| Msa1440560 | Msa1453320 | 0.829791 | 4.223178e-55 | -8.615850e-47 |
| Msa1448640 | Msa1453320 | 0.804909 | 1.722689e-49 | -8.615850e-47 |
| Msa1453320 | Msa1455490 | 0.806235 | 9.075335e-50 | -8.615850e-47 |
| Msa1453320 | Msa1457040 | 0.802953 | 4.392605e-49 | -8.615850e-47 |
| Msa1453320 | Msa1459100 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa1453320 | Msa1466540 | 0.813147 | 2.964895e-51 | -8.615850e-47 |
| Msa0613460 | Msa1453320 | 0.803699 | 3.077651e-49 | -8.615850e-47 |
| Msa0620960 | Msa1453320 | 0.801178 | 1.017786e-48 | -8.615850e-47 |
| Msa0625190 | Msa1453320 | 0.850531 | 1.598685e-60 | -8.615850e-47 |
| Msa0625720 | Msa1453320 | 0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0626280 | Msa1453320 | 0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0648310 | Msa1453320 | 0.804149 | 2.480792e-49 | -8.615850e-47 |
| Msa0654010 | Msa1453320 | 0.804133 | 2.500890e-49 | -8.615850e-47 |
| Msa0657970 | Msa1453320 | 0.805014 | 1.637431e-49 | -8.615850e-47 |
| Msa0658570 | Msa1453320 | 0.821272 | 4.410467e-53 | -8.615850e-47 |
| Msa0661650 | Msa1453320 | 0.851682 | 7.571137e-61 | -8.615850e-47 |
| Msa0663380 | Msa1453320 | 0.810951 | 8.930223e-51 | -8.615850e-47 |
| Msa0681250 | Msa1453320 | 0.827267 | 1.719530e-54 | -8.615850e-47 |
| Msa0681270 | Msa1453320 | 0.826755 | 2.278789e-54 | -8.615850e-47 |
| Msa0693380 | Msa1453320 | 0.817097 | 3.935092e-52 | -8.615850e-47 |
| Msa0695820 | Msa1453320 | 0.811981 | 5.332633e-51 | -8.615850e-47 |
| Msa0701830 | Msa1453320 | 0.808981 | 2.371404e-50 | -8.615850e-47 |
| Msa0703360 | Msa1453320 | 0.808407 | 3.144735e-50 | -8.615850e-47 |
| Msa0723990 | Msa1453320 | 0.807798 | 4.238718e-50 | -8.615850e-47 |
| Msa0724210 | Msa1453320 | 0.837734 | 4.362982e-57 | -8.615850e-47 |
| Msa0731940 | Msa1453320 | 0.803799 | 2.933457e-49 | -8.615850e-47 |
| Msa0735170 | Msa1453320 | 0.800013 | 1.759104e-48 | -8.615850e-47 |
| Msa0753720 | Msa1453320 | 0.821169 | 4.656747e-53 | -8.615850e-47 |
| Msa0760130 | Msa1453320 | 0.804463 | 2.134232e-49 | -8.615850e-47 |
| Msa0766630 | Msa1453320 | 0.842190 | 3.008629e-58 | -8.615850e-47 |
| Msa0786340 | Msa1453320 | 0.812629 | 3.850049e-51 | -8.615850e-47 |
| Msa0790510 | Msa1453320 | 0.810832 | 9.473610e-51 | -8.615850e-47 |
| Msa0806090 | Msa1453320 | 0.806302 | 8.787820e-50 | -8.615850e-47 |
| Msa0807030 | Msa1453320 | 0.803091 | 4.113137e-49 | -8.615850e-47 |
| Msa0817460 | Msa1453320 | 0.807687 | 4.475690e-50 | -8.615850e-47 |
| Msa0828240 | Msa1453320 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0142220 | Msa1453320 | 0.801068 | 1.071862e-48 | -8.615850e-47 |
| Msa0157290 | Msa1453320 | 0.802931 | 4.437747e-49 | -8.615850e-47 |
| Msa0165220 | Msa1453320 | 0.815801 | 7.675642e-52 | -8.615850e-47 |
| Msa0170140 | Msa1453320 | 0.816982 | 4.175882e-52 | -8.615850e-47 |
| Msa0171540 | Msa1453320 | 0.805830 | 1.104632e-49 | -8.615850e-47 |
| Msa0187830 | Msa1453320 | 0.805921 | 1.056674e-49 | -8.615850e-47 |
| Msa0188460 | Msa1453320 | 0.805506 | 1.291696e-49 | -8.615850e-47 |
| Msa0188830 | Msa1453320 | 0.818612 | 1.790163e-52 | -8.615850e-47 |
| Msa0201070 | Msa1453320 | 0.804561 | 2.036044e-49 | -8.615850e-47 |
| Msa0210450 | Msa1453320 | 0.802535 | 5.357993e-49 | -8.615850e-47 |
| Msa0212310 | Msa1453320 | 0.815129 | 1.083086e-51 | -8.615850e-47 |
| Msa0212990 | Msa1453320 | 0.831404 | 1.701676e-55 | -8.615850e-47 |
| Msa0225320 | Msa1453320 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0229590 | Msa1453320 | 0.817328 | 3.490779e-52 | -8.615850e-47 |
| Msa0233300 | Msa1453320 | 0.808765 | 2.636794e-50 | -8.615850e-47 |
| Msa1225230 | Msa1453320 | 0.816954 | 4.236143e-52 | -8.615850e-47 |
| Msa1229600 | Msa1453320 | 0.823985 | 1.031513e-53 | -8.615850e-47 |
| Msa1233890 | Msa1453320 | 0.804312 | 2.294455e-49 | -8.615850e-47 |
| Msa1244250 | Msa1453320 | 0.813675 | 2.270538e-51 | -8.615850e-47 |
| Msa1249490 | Msa1453320 | 0.848043 | 7.879471e-60 | -8.615850e-47 |
| Msa1268880 | Msa1453320 | 0.806369 | 8.506421e-50 | -8.615850e-47 |
| Msa1277660 | Msa1453320 | 0.814869 | 1.236917e-51 | -8.615850e-47 |
| Msa1282580 | Msa1453320 | -0.819080 | 1.401059e-52 | -8.615850e-47 |
| Msa1283860 | Msa1453320 | 0.807212 | 5.643999e-50 | -8.615850e-47 |
| Msa1284680 | Msa1453320 | 0.834077 | 3.691194e-56 | -8.615850e-47 |
| Msa1286760 | Msa1453320 | 0.812957 | 3.264558e-51 | -8.615850e-47 |
| Msa1286800 | Msa1453320 | 0.807472 | 4.972300e-50 | -8.615850e-47 |
| Msa1302830 | Msa1453320 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
| Msa1304890 | Msa1453320 | -0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa1308380 | Msa1453320 | 0.800429 | 1.447263e-48 | -8.615850e-47 |
| Msa1309030 | Msa1453320 | 0.811721 | 6.074954e-51 | -8.615850e-47 |
| Msa1310210 | Msa1453320 | 0.824964 | 6.065855e-54 | -8.615850e-47 |
| Msa1311340 | Msa1453320 | 0.802167 | 6.379141e-49 | -8.615850e-47 |
| Msa1313150 | Msa1453320 | 0.816456 | 5.477654e-52 | -8.615850e-47 |
| Msa0376590 | Msa1453320 | 0.803648 | 3.152970e-49 | -8.615850e-47 |
| Msa0388960 | Msa1453320 | 0.822335 | 2.503328e-53 | -8.615850e-47 |
| Msa0395770 | Msa1453320 | -0.817351 | 3.449665e-52 | -8.615850e-47 |
| Msa0397750 | Msa1453320 | 0.812056 | 5.137137e-51 | -8.615850e-47 |
| Msa0398790 | Msa1453320 | 0.816324 | 5.863441e-52 | -8.615850e-47 |
| Msa0402180 | Msa1453320 | 0.801528 | 8.627634e-49 | -8.615850e-47 |
| Msa0402290 | Msa1453320 | 0.802007 | 6.880915e-49 | -8.615850e-47 |
| Msa0404190 | Msa1453320 | 0.801265 | 9.768867e-49 | -8.615850e-47 |
| Msa0414230 | Msa1453320 | 0.823938 | 1.057909e-53 | -8.615850e-47 |
| Msa0415980 | Msa1453320 | 0.803385 | 3.574793e-49 | -8.615850e-47 |
| Msa0428080 | Msa1453320 | 0.821841 | 3.258081e-53 | -8.615850e-47 |
| Msa0430420 | Msa1453320 | 0.804039 | 2.615358e-49 | -8.615850e-47 |
| Msa0432300 | Msa1453320 | 0.821896 | 3.163898e-53 | -8.615850e-47 |
| Msa0435230 | Msa1453320 | 0.806589 | 7.645374e-50 | -8.615850e-47 |
| Msa0440400 | Msa1453320 | 0.929143 | 1.060208e-92 | -8.615850e-47 |
| Msa0440750 | Msa1453320 | 0.801827 | 7.492931e-49 | -8.615850e-47 |
| Msa0455760 | Msa1453320 | 0.812185 | 4.815136e-51 | -8.615850e-47 |
| Msa0464100 | Msa1453320 | 0.805076 | 1.589203e-49 | -8.615850e-47 |
| Msa0469160 | Msa1453320 | 0.816753 | 4.700400e-52 | -8.615850e-47 |
| Msa0479340 | Msa1453320 | 0.822786 | 1.966341e-53 | -8.615850e-47 |
| Msa0998690 | Msa1453320 | 0.807253 | 5.533111e-50 | -8.615850e-47 |
| Msa0999290 | Msa1453320 | 0.809109 | 2.225718e-50 | -8.615850e-47 |
| Msa1000890 | Msa1453320 | 0.801634 | 8.206833e-49 | -8.615850e-47 |
| Msa1000900 | Msa1453320 | 0.805580 | 1.246543e-49 | -8.615850e-47 |
| Msa1003620 | Msa1453320 | 0.811014 | 8.653797e-51 | -8.615850e-47 |
| Msa1014540 | Msa1453320 | 0.848060 | 7.793188e-60 | -8.615850e-47 |
| Msa1014990 | Msa1453320 | 0.819184 | 1.326830e-52 | -8.615850e-47 |
| Msa1016320 | Msa1453320 | 0.812153 | 4.892305e-51 | -8.615850e-47 |
| Msa1019000 | Msa1453320 | 0.805158 | 1.527736e-49 | -8.615850e-47 |
| Msa1019150 | Msa1453320 | 0.832236 | 1.060465e-55 | -8.615850e-47 |
| Msa1029240 | Msa1453320 | 0.815880 | 7.370579e-52 | -8.615850e-47 |
| Msa1030970 | Msa1453320 | 0.822777 | 1.975456e-53 | -8.615850e-47 |
| Msa1037780 | Msa1453320 | 0.838517 | 2.743409e-57 | -8.615850e-47 |
| Msa1046460 | Msa1453320 | 0.823733 | 1.181323e-53 | -8.615850e-47 |
| Msa1047080 | Msa1453320 | 0.807306 | 5.392107e-50 | -8.615850e-47 |
| Msa1054990 | Msa1453320 | 0.812604 | 3.899396e-51 | -8.615850e-47 |
| Msa1061020 | Msa1453320 | -0.804381 | 2.220170e-49 | -8.615850e-47 |
| Msa1061060 | Msa1453320 | -0.819234 | 1.292809e-52 | -8.615850e-47 |
| Msa1066670 | Msa1453320 | 0.816016 | 6.871663e-52 | -8.615850e-47 |
| Msa1075220 | Msa1453320 | -0.818719 | 1.692776e-52 | -8.615850e-47 |
| Msa1075650 | Msa1453320 | 0.821320 | 4.299771e-53 | -8.615850e-47 |
| Msa1082500 | Msa1453320 | 0.831847 | 1.323242e-55 | -8.615850e-47 |
| Msa1083840 | Msa1453320 | 0.819726 | 9.980921e-53 | -8.615850e-47 |
| Msa1089940 | Msa1453320 | 0.842084 | 3.209122e-58 | -8.615850e-47 |
| Msa1100050 | Msa1453320 | 0.802432 | 5.627398e-49 | -8.615850e-47 |
| Msa1104090 | Msa1453320 | 0.834192 | 3.454724e-56 | -8.615850e-47 |
| Msa0264830 | Msa1453320 | 0.822041 | 2.928092e-53 | -8.615850e-47 |
| Msa0267370 | Msa1453320 | 0.810534 | 1.099141e-50 | -8.615850e-47 |
| Msa0269810 | Msa1453320 | 0.821952 | 3.071143e-53 | -8.615850e-47 |
| Msa0273100 | Msa1453320 | 0.815639 | 8.340778e-52 | -8.615850e-47 |
| Msa0281930 | Msa1453320 | 0.810449 | 1.146382e-50 | -8.615850e-47 |
| Msa0283450 | Msa1453320 | 0.802574 | 5.258665e-49 | -8.615850e-47 |
| Msa0283910 | Msa1453320 | 0.805829 | 1.105025e-49 | -8.615850e-47 |
| Msa0290720 | Msa1453320 | 0.802343 | 5.867706e-49 | -8.615850e-47 |
| Msa0296480 | Msa1453320 | 0.813066 | 3.088624e-51 | -8.615850e-47 |
| Msa0302870 | Msa1453320 | 0.811907 | 5.536370e-51 | -8.615850e-47 |
| Msa0305190 | Msa1453320 | 0.812706 | 3.705082e-51 | -8.615850e-47 |
| Msa0321080 | Msa1453320 | 0.820449 | 6.818209e-53 | -8.615850e-47 |
| Msa0326940 | Msa1453320 | 0.812153 | 4.892335e-51 | -8.615850e-47 |
| Msa0330340 | Msa1453320 | 0.819530 | 1.106679e-52 | -8.615850e-47 |
| Msa0340340 | Msa1453320 | 0.821375 | 4.175024e-53 | -8.615850e-47 |
| Msa0340450 | Msa1453320 | 0.836056 | 1.170435e-56 | -8.615850e-47 |
| Msa0350990 | Msa1453320 | 0.803270 | 3.777391e-49 | -8.615850e-47 |
| Msa0351030 | Msa1453320 | 0.808107 | 3.644059e-50 | -8.615850e-47 |
| Msa0363530 | Msa1453320 | 0.803228 | 3.853403e-49 | -8.615850e-47 |
| Msa0363790 | Msa1453320 | 0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa1113170 | Msa1453320 | 0.818185 | 2.235982e-52 | -8.615850e-47 |
| Msa1116130 | Msa1453320 | -0.801397 | 9.177638e-49 | -8.615850e-47 |
| Msa1121490 | Msa1453320 | 0.831852 | 1.319734e-55 | -8.615850e-47 |
| Msa1135470 | Msa1453320 | 0.802200 | 6.280940e-49 | -8.615850e-47 |
| Msa1137570 | Msa1453320 | 0.809013 | 2.334096e-50 | -8.615850e-47 |
| Msa1139000 | Msa1453320 | -0.812070 | 5.100391e-51 | -8.615850e-47 |
| Msa1147740 | Msa1453320 | 0.845155 | 4.844713e-59 | -8.615850e-47 |
| Msa1162550 | Msa1453320 | -0.834908 | 2.283269e-56 | -8.615850e-47 |
| Msa1162780 | Msa1453320 | 0.818739 | 1.675039e-52 | -8.615850e-47 |
| Msa1181870 | Msa1453320 | 0.806943 | 6.435101e-50 | -8.615850e-47 |
| Msa1185110 | Msa1453320 | 0.817476 | 3.233214e-52 | -8.615850e-47 |
| Msa1186060 | Msa1453320 | 0.821831 | 3.276270e-53 | -8.615850e-47 |
| Msa1186950 | Msa1453320 | -0.841296 | 5.179325e-58 | -8.615850e-47 |
| Msa1201200 | Msa1453320 | 0.855216 | 7.318889e-62 | -8.615850e-47 |
| Msa1207220 | Msa1453320 | 0.839946 | 1.168783e-57 | -8.615850e-47 |
| Msa0488560 | Msa1453320 | 0.803396 | 3.557166e-49 | -8.615850e-47 |
| Msa0502340 | Msa1453320 | 0.802964 | 4.369286e-49 | -8.615850e-47 |
| Msa0529890 | Msa1453320 | 0.808704 | 2.717923e-50 | -8.615850e-47 |
| Msa0532350 | Msa1453320 | 0.818419 | 1.980174e-52 | -8.615850e-47 |
| Msa0545210 | Msa1453320 | 0.809481 | 1.852662e-50 | -8.615850e-47 |
| Msa0545700 | Msa1453320 | 0.806469 | 8.104126e-50 | -8.615850e-47 |
| Msa0553240 | Msa1453320 | 0.801078 | 1.066952e-48 | -8.615850e-47 |
| Msa0558690 | Msa1453320 | 0.800044 | 1.733036e-48 | -8.615850e-47 |
| Msa0567020 | Msa1453320 | 0.800827 | 1.200612e-48 | -8.615850e-47 |
| Msa0571630 | Msa1453320 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0580150 | Msa1453320 | 0.800840 | 1.193519e-48 | -8.615850e-47 |
| Msa0600700 | Msa1453320 | 0.816587 | 5.122116e-52 | -8.615850e-47 |
| Msa0842650 | Msa1453320 | 0.817379 | 3.399651e-52 | -8.615850e-47 |
| Msa0843260 | Msa1453320 | 0.811117 | 8.217388e-51 | -8.615850e-47 |
| Msa0861130 | Msa1453320 | 0.805810 | 1.115433e-49 | -8.615850e-47 |
| Msa0870830 | Msa1453320 | 0.813608 | 2.348060e-51 | -8.615850e-47 |
| Msa0875290 | Msa1453320 | 0.804782 | 1.831124e-49 | -8.615850e-47 |
| Msa0885280 | Msa1453320 | 0.807814 | 4.206607e-50 | -8.615850e-47 |
| Msa0897330 | Msa1453320 | 0.820273 | 7.482311e-53 | -8.615850e-47 |
| Msa0907070 | Msa1453320 | 0.801152 | 1.030310e-48 | -8.615850e-47 |
| Msa0907260 | Msa1453320 | 0.812564 | 3.979008e-51 | -8.615850e-47 |
| Msa0915840 | Msa1453320 | 0.800615 | 1.326254e-48 | -8.615850e-47 |
| Msa0925290 | Msa1453320 | 0.810822 | 9.521292e-51 | -8.615850e-47 |
| Msa0926890 | Msa1453320 | 0.818301 | 2.105575e-52 | -8.615850e-47 |
| Msa0927310 | Msa1453320 | 0.821239 | 4.487824e-53 | -8.615850e-47 |
| Msa0927380 | Msa1453320 | 0.815709 | 8.043676e-52 | -8.615850e-47 |
| Msa0935910 | Msa1453320 | 0.811875 | 5.623653e-51 | -8.615850e-47 |
| Msa0936530 | Msa1453320 | 0.804492 | 2.104858e-49 | -8.615850e-47 |
| Msa0936960 | Msa1453320 | 0.800541 | 1.373103e-48 | -8.615850e-47 |
| Msa0939250 | Msa1453320 | 0.801570 | 8.459270e-49 | -8.615850e-47 |
| Msa0952040 | Msa1453320 | 0.814986 | 1.164689e-51 | -8.615850e-47 |
| Msa0954910 | Msa1453320 | 0.816594 | 5.103706e-52 | -8.615850e-47 |
| Msa0956270 | Msa1453320 | 0.805577 | 1.248080e-49 | -8.615850e-47 |
| Msa0969520 | Msa1453320 | 0.820171 | 7.896098e-53 | -8.615850e-47 |
| Msa0973600 | Msa1453320 | 0.803823 | 2.900203e-49 | -8.615850e-47 |
| Msa0975220 | Msa1453320 | 0.829340 | 5.437767e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453320 | MtrunA17_Chr1g0213811 | 96.279 | 215 | 3 | 2 | 1 | 210 | 1 | 215 | 2.99e-151 | 421 |
| Msa1453320 | MtrunA17_Chr5g0406051 | 53.846 | 156 | 66 | 2 | 55 | 210 | 67 | 216 | 8.75e-49 | 160 |
| Msa1453320 | MtrunA17_Chr3g0143381 | 56.429 | 140 | 59 | 1 | 71 | 210 | 70 | 207 | 1.22e-48 | 160 |
| Msa1453320 | MtrunA17_Chr8g0371281 | 48.718 | 156 | 70 | 2 | 55 | 210 | 59 | 204 | 5.98e-46 | 153 |
| Msa1453320 | MtrunA17_Chr8g0371221 | 53.571 | 140 | 63 | 1 | 71 | 210 | 68 | 205 | 1.65e-45 | 152 |
| Msa1453320 | MtrunA17_Chr8g0371251 | 50.714 | 140 | 67 | 1 | 71 | 210 | 69 | 206 | 3.15e-43 | 146 |
| Msa1453320 | MtrunA17_Chr6g0452281 | 50.365 | 137 | 66 | 1 | 73 | 209 | 54 | 188 | 8.48e-42 | 143 |
| Msa1453320 | MtrunA17_Chr4g0066531 | 49.645 | 141 | 69 | 1 | 69 | 209 | 36 | 174 | 3.36e-40 | 139 |
| Msa1453320 | MtrunA17_Chr2g0286811 | 47.552 | 143 | 73 | 1 | 68 | 210 | 38 | 178 | 2.20e-39 | 137 |
| Msa1453320 | MtrunA17_Chr8g0371231 | 51.200 | 125 | 59 | 1 | 86 | 210 | 8 | 130 | 7.43e-36 | 125 |
| Msa1453320 | MtrunA17_Chr3g0143371 | 48.624 | 109 | 54 | 1 | 102 | 210 | 1 | 107 | 8.12e-27 | 100 |
| Msa1453320 | MtrunA17_Chr3g0143361 | 50.476 | 105 | 50 | 1 | 105 | 209 | 4 | 106 | 5.48e-26 | 99.4 |
| Msa1453320 | MtrunA17_Chr4g0053801 | 39.716 | 141 | 82 | 2 | 71 | 209 | 86 | 225 | 1.33e-25 | 100 |
| Msa1453320 | MtrunA17_Chr5g0401481 | 34.395 | 157 | 84 | 3 | 71 | 209 | 84 | 239 | 2.04e-21 | 89.7 |
| Msa1453320 | MtrunA17_Chr8g0371241 | 45.122 | 82 | 43 | 1 | 106 | 187 | 4 | 83 | 2.66e-18 | 78.6 |
| Msa1453320 | MtrunA17_Chr3g0143351 | 43.119 | 109 | 53 | 3 | 105 | 210 | 4 | 106 | 2.77e-15 | 70.9 |
| Msa1453320 | MtrunA17_Chr6g0470551 | 27.451 | 204 | 116 | 7 | 8 | 209 | 4 | 177 | 3.69e-14 | 69.7 |
| Msa1453320 | MtrunA17_Chr3g0098671 | 52.632 | 57 | 26 | 1 | 154 | 210 | 31 | 86 | 3.45e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453320 | AT2G43080.1 | 68.056 | 216 | 57 | 2 | 4 | 209 | 3 | 216 | 1.57e-105 | 305 |
| Msa1453320 | AT2G43080.2 | 60.773 | 181 | 59 | 2 | 4 | 174 | 3 | 181 | 1.18e-72 | 218 |
| Msa1453320 | AT1G20270.1 | 59.286 | 140 | 55 | 1 | 71 | 210 | 77 | 214 | 2.73e-49 | 162 |
| Msa1453320 | AT4G35810.1 | 57.746 | 142 | 54 | 2 | 71 | 210 | 81 | 218 | 5.18e-49 | 162 |
| Msa1453320 | AT4G35810.2 | 57.746 | 142 | 54 | 2 | 71 | 210 | 81 | 218 | 5.18e-49 | 162 |
| Msa1453320 | AT5G66060.1 | 50.296 | 169 | 75 | 2 | 42 | 210 | 57 | 216 | 1.25e-47 | 158 |
| Msa1453320 | AT2G17720.1 | 55.634 | 142 | 57 | 2 | 71 | 210 | 81 | 218 | 9.45e-47 | 155 |
| Msa1453320 | AT5G66060.2 | 50.296 | 169 | 73 | 3 | 42 | 210 | 57 | 214 | 2.33e-46 | 153 |
| Msa1453320 | AT1G20270.2 | 59.055 | 127 | 50 | 1 | 71 | 197 | 77 | 201 | 2.14e-44 | 147 |
| Msa1453320 | AT1G20270.3 | 59.055 | 127 | 50 | 1 | 71 | 197 | 77 | 201 | 2.14e-44 | 147 |
| Msa1453320 | AT3G28480.1 | 48.905 | 137 | 68 | 1 | 73 | 209 | 59 | 193 | 4.24e-41 | 142 |
| Msa1453320 | AT3G28490.1 | 48.201 | 139 | 69 | 2 | 73 | 210 | 35 | 171 | 3.20e-37 | 131 |
| Msa1453320 | AT3G06300.1 | 46.099 | 141 | 74 | 1 | 69 | 209 | 37 | 175 | 1.97e-35 | 127 |
| Msa1453320 | AT5G18900.1 | 46.099 | 141 | 74 | 1 | 69 | 209 | 36 | 174 | 3.77e-35 | 126 |
| Msa1453320 | AT3G28480.2 | 43.357 | 143 | 75 | 2 | 73 | 209 | 59 | 201 | 1.07e-30 | 115 |
| Msa1453320 | AT4G35820.1 | 44.898 | 147 | 61 | 3 | 71 | 209 | 89 | 223 | 2.47e-29 | 110 |
| Msa1453320 | AT4G33910.1 | 35.758 | 165 | 97 | 3 | 47 | 209 | 61 | 218 | 3.62e-24 | 97.1 |
| Msa1453320 | AT2G23096.1 | 32.609 | 138 | 89 | 2 | 73 | 209 | 71 | 205 | 2.14e-16 | 75.9 |
| Msa1453320 | AT4G25600.1 | 27.374 | 179 | 103 | 5 | 39 | 210 | 21 | 179 | 1.25e-11 | 62.8 |
Find 42 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACAATGCTTATGTATTT+AGG | 0.204792 | tig0034569:+29420 | Msa1453320:CDS |
| CTTGAAGTTGTTGTTGTAAA+TGG | 0.219348 | tig0034569:-28847 | None:intergenic |
| GTCACAATCGGAATGATTAT+TGG | 0.231053 | tig0034569:+28680 | Msa1453320:CDS |
| ACGAGGAATGTGATTATCTT+AGG | 0.235744 | tig0034569:+28995 | Msa1453320:CDS |
| TCTCAAATTCCAATTGAAAA+TGG | 0.255513 | tig0034569:+29177 | Msa1453320:CDS |
| GTCGTCGTTATTATAACCTC+TGG | 0.331910 | tig0034569:-28881 | None:intergenic |
| AGTGATGTCAGAACAAGTTC+TGG | 0.417022 | tig0034569:+29084 | Msa1453320:CDS |
| GGAGACCAACTAAGGACTTC+AGG | 0.418550 | tig0034569:-28940 | None:intergenic |
| CGAGGAATGTGATTATCTTA+GGG | 0.422123 | tig0034569:+28996 | Msa1453320:CDS |
| TGCAGGTGCTCTCTCTCAAT+TGG | 0.426323 | tig0034569:+28795 | Msa1453320:intron |
| CTTCTCACTTTCGTCACAAT+CGG | 0.443635 | tig0034569:+28668 | Msa1453320:CDS |
| TCGTCGTTATTATAACCTCT+GGG | 0.448332 | tig0034569:-28880 | None:intergenic |
| TATTTAGGTGACAATGTTGA+GGG | 0.478530 | tig0034569:+29435 | Msa1453320:CDS |
| AAAGAAAGAGATTGACTGAC+TGG | 0.485358 | tig0034569:+28589 | Msa1453320:five_prime_UTR |
| TTAAACCTGAAGTCCTTAGT+TGG | 0.490970 | tig0034569:+28935 | Msa1453320:CDS |
| GTCGATGCAAACACAGGAAA+GGG | 0.501803 | tig0034569:+29054 | Msa1453320:CDS |
| GAAGCACAAATCTTACGCCT+TGG | 0.505360 | tig0034569:+28907 | Msa1453320:CDS |
| CCGGCGATGAAGATTGTGTT+CGG | 0.507131 | tig0034569:+28644 | Msa1453320:CDS |
| AGGTGACAATGTTGAGGGAG+GGG | 0.507663 | tig0034569:+29440 | Msa1453320:CDS |
| GAGAGCTTATGCAAGTCCTT+AGG | 0.507911 | tig0034569:+29199 | Msa1453320:CDS |
| TTATGAAGTAAAATAATTCG+TGG | 0.516165 | tig0034569:-28961 | None:intergenic |
| TAGGTGACAATGTTGAGGGA+GGG | 0.530460 | tig0034569:+29439 | Msa1453320:CDS |
| TTAGGTGACAATGTTGAGGG+AGG | 0.555757 | tig0034569:+29438 | Msa1453320:CDS |
| GTATTTAGGTGACAATGTTG+AGG | 0.557593 | tig0034569:+29434 | Msa1453320:CDS |
| AATCGAATCGATGAGTCCTC+CGG | 0.571781 | tig0034569:+28625 | Msa1453320:exon |
| TAAGCATTGTAGCTATTCGC+TGG | 0.573513 | tig0034569:-29410 | None:intergenic |
| TAATTCGTGGAGACCAACTA+AGG | 0.573940 | tig0034569:-28948 | None:intergenic |
| CGTCGATGCAAACACAGGAA+AGG | 0.581169 | tig0034569:+29053 | Msa1453320:CDS |
| ACTGATTCTTCTCATACCTA+AGG | 0.583409 | tig0034569:-29215 | None:intergenic |
| CCGAACACAATCTTCATCGC+CGG | 0.591398 | tig0034569:-28644 | None:intergenic |
| TGCTTGGGAAAATGAATGAA+AGG | 0.591622 | tig0034569:+28537 | None:intergenic |
| CTTCAGGTTTAACATATCCA+AGG | 0.599046 | tig0034569:-28924 | None:intergenic |
| CAGTTCAATTTGAAGCGTGG+TGG | 0.599421 | tig0034569:+29387 | Msa1453320:intron |
| AATCACATTCCTCGTAGCTG+AGG | 0.604915 | tig0034569:-28987 | None:intergenic |
| AACACAATCTTCATCGCCGG+AGG | 0.630657 | tig0034569:-28641 | None:intergenic |
| GAGGAATGTGATTATCTTAG+GGG | 0.634805 | tig0034569:+28997 | Msa1453320:CDS |
| TAACAGTTCAATTTGAAGCG+TGG | 0.636945 | tig0034569:+29384 | Msa1453320:intron |
| AGGGGAAACGCATTTCCCAT+CGG | 0.656658 | tig0034569:+29458 | Msa1453320:CDS |
| ACTGTCGTCGATGCAAACAC+AGG | 0.669566 | tig0034569:+29048 | Msa1453320:CDS |
| CGTCGTTATTATAACCTCTG+GGG | 0.670331 | tig0034569:-28879 | None:intergenic |
| TCATAACTTCCTCAGCTACG+AGG | 0.747861 | tig0034569:+28978 | Msa1453320:CDS |
| TCAAGATCACTACTCCCCAG+AGG | 0.760039 | tig0034569:+28865 | Msa1453320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAAGTAAAATAATTCG+TGG | - | tig0034569:28964-28983 | None:intergenic | 20.0% |
| !! | TTATGAAGTAAAATAATTCG+TGG | - | tig0034569:28964-28983 | None:intergenic | 20.0% |
| !! | TTTTCAATTGCATGTATCAT+AGG | - | tig0034569:29141-29160 | None:intergenic | 25.0% |
| ! | TCTCAAATTCCAATTGAAAA+TGG | + | tig0034569:29177-29196 | Msa1453320:CDS | 25.0% |
| ! | ATCAGAAAAATAGTCATGAT+GGG | - | tig0034569:29250-29269 | None:intergenic | 25.0% |
| ! | TATCAGAAAAATAGTCATGA+TGG | - | tig0034569:29251-29270 | None:intergenic | 25.0% |
| !! | TTTTCAATTGCATGTATCAT+AGG | - | tig0034569:29141-29160 | None:intergenic | 25.0% |
| ! | TCTCAAATTCCAATTGAAAA+TGG | + | tig0034569:29177-29196 | Msa1453320:CDS | 25.0% |
| ! | ATCAGAAAAATAGTCATGAT+GGG | - | tig0034569:29250-29269 | None:intergenic | 25.0% |
| ! | TATCAGAAAAATAGTCATGA+TGG | - | tig0034569:29251-29270 | None:intergenic | 25.0% |
| ! | ATGATCGAATCGATTCAATT+TGG | + | tig0034569:28763-28782 | Msa1453320:intron | 30.0% |
| ! | TGATCGAATCGATTCAATTT+GGG | + | tig0034569:28764-28783 | Msa1453320:intron | 30.0% |
| ! | CTTGAAGTTGTTGTTGTAAA+TGG | - | tig0034569:28850-28869 | None:intergenic | 30.0% |
| ! | ATAAGCTCTCCATTTTCAAT+TGG | - | tig0034569:29189-29208 | None:intergenic | 30.0% |
| TCAGAAAAATAGTCATGATG+GGG | - | tig0034569:29249-29268 | None:intergenic | 30.0% | |
| GCTACAATGCTTATGTATTT+AGG | + | tig0034569:29420-29439 | Msa1453320:CDS | 30.0% | |
| TATTTAGGTGACAATGTTGA+GGG | + | tig0034569:29435-29454 | Msa1453320:CDS | 30.0% | |
| ! | ATGATCGAATCGATTCAATT+TGG | + | tig0034569:28763-28782 | Msa1453320:intron | 30.0% |
| ! | TGATCGAATCGATTCAATTT+GGG | + | tig0034569:28764-28783 | Msa1453320:intron | 30.0% |
| ! | CTTGAAGTTGTTGTTGTAAA+TGG | - | tig0034569:28850-28869 | None:intergenic | 30.0% |
| ! | ATAAGCTCTCCATTTTCAAT+TGG | - | tig0034569:29189-29208 | None:intergenic | 30.0% |
| TCAGAAAAATAGTCATGATG+GGG | - | tig0034569:29249-29268 | None:intergenic | 30.0% | |
| GCTACAATGCTTATGTATTT+AGG | + | tig0034569:29420-29439 | Msa1453320:CDS | 30.0% | |
| TATTTAGGTGACAATGTTGA+GGG | + | tig0034569:29435-29454 | Msa1453320:CDS | 30.0% | |
| AAAGAAAGAGATTGACTGAC+TGG | + | tig0034569:28589-28608 | Msa1453320:five_prime_UTR | 35.0% | |
| GTCACAATCGGAATGATTAT+TGG | + | tig0034569:28680-28699 | Msa1453320:CDS | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | tig0034569:28723-28742 | None:intergenic | 35.0% | |
| ! | CAATTTGGGATTACAATTGC+AGG | + | tig0034569:28778-28797 | Msa1453320:intron | 35.0% |
| TCGTCGTTATTATAACCTCT+GGG | - | tig0034569:28883-28902 | None:intergenic | 35.0% | |
| ! | CTTCAGGTTTAACATATCCA+AGG | - | tig0034569:28927-28946 | None:intergenic | 35.0% |
| TTAAACCTGAAGTCCTTAGT+TGG | + | tig0034569:28935-28954 | Msa1453320:CDS | 35.0% | |
| ACGAGGAATGTGATTATCTT+AGG | + | tig0034569:28995-29014 | Msa1453320:CDS | 35.0% | |
| CGAGGAATGTGATTATCTTA+GGG | + | tig0034569:28996-29015 | Msa1453320:CDS | 35.0% | |
| GAGGAATGTGATTATCTTAG+GGG | + | tig0034569:28997-29016 | Msa1453320:CDS | 35.0% | |
| !!! | CAGTTGAAATTTTGAGACGA+GGG | - | tig0034569:29032-29051 | None:intergenic | 35.0% |
| !!! | ACAGTTGAAATTTTGAGACG+AGG | - | tig0034569:29033-29052 | None:intergenic | 35.0% |
| ! | ACTGATTCTTCTCATACCTA+AGG | - | tig0034569:29218-29237 | None:intergenic | 35.0% |
| AACTGTTAAGCAAGCAGAAA+GGG | - | tig0034569:29372-29391 | None:intergenic | 35.0% | |
| ! | TAACAGTTCAATTTGAAGCG+TGG | + | tig0034569:29384-29403 | Msa1453320:intron | 35.0% |
| GTATTTAGGTGACAATGTTG+AGG | + | tig0034569:29434-29453 | Msa1453320:CDS | 35.0% | |
| AAAGAAAGAGATTGACTGAC+TGG | + | tig0034569:28589-28608 | Msa1453320:five_prime_UTR | 35.0% | |
| GTCACAATCGGAATGATTAT+TGG | + | tig0034569:28680-28699 | Msa1453320:CDS | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | tig0034569:28723-28742 | None:intergenic | 35.0% | |
| ! | CAATTTGGGATTACAATTGC+AGG | + | tig0034569:28778-28797 | Msa1453320:intron | 35.0% |
| TCGTCGTTATTATAACCTCT+GGG | - | tig0034569:28883-28902 | None:intergenic | 35.0% | |
| ! | CTTCAGGTTTAACATATCCA+AGG | - | tig0034569:28927-28946 | None:intergenic | 35.0% |
| TTAAACCTGAAGTCCTTAGT+TGG | + | tig0034569:28935-28954 | Msa1453320:CDS | 35.0% | |
| ACGAGGAATGTGATTATCTT+AGG | + | tig0034569:28995-29014 | Msa1453320:CDS | 35.0% | |
| CGAGGAATGTGATTATCTTA+GGG | + | tig0034569:28996-29015 | Msa1453320:CDS | 35.0% | |
| GAGGAATGTGATTATCTTAG+GGG | + | tig0034569:28997-29016 | Msa1453320:CDS | 35.0% | |
| !!! | CAGTTGAAATTTTGAGACGA+GGG | - | tig0034569:29032-29051 | None:intergenic | 35.0% |
| !!! | ACAGTTGAAATTTTGAGACG+AGG | - | tig0034569:29033-29052 | None:intergenic | 35.0% |
| ! | ACTGATTCTTCTCATACCTA+AGG | - | tig0034569:29218-29237 | None:intergenic | 35.0% |
| AACTGTTAAGCAAGCAGAAA+GGG | - | tig0034569:29372-29391 | None:intergenic | 35.0% | |
| ! | TAACAGTTCAATTTGAAGCG+TGG | + | tig0034569:29384-29403 | Msa1453320:intron | 35.0% |
| GTATTTAGGTGACAATGTTG+AGG | + | tig0034569:29434-29453 | Msa1453320:CDS | 35.0% | |
| CTTCTCACTTTCGTCACAAT+CGG | + | tig0034569:28668-28687 | Msa1453320:CDS | 40.0% | |
| CGTCGTTATTATAACCTCTG+GGG | - | tig0034569:28882-28901 | None:intergenic | 40.0% | |
| GTCGTCGTTATTATAACCTC+TGG | - | tig0034569:28884-28903 | None:intergenic | 40.0% | |
| TAATTCGTGGAGACCAACTA+AGG | - | tig0034569:28951-28970 | None:intergenic | 40.0% | |
| !!! | TGAAATTTTGAGACGAGGGA+GGG | - | tig0034569:29028-29047 | None:intergenic | 40.0% |
| !!! | TTGAAATTTTGAGACGAGGG+AGG | - | tig0034569:29029-29048 | None:intergenic | 40.0% |
| AGTGATGTCAGAACAAGTTC+TGG | + | tig0034569:29084-29103 | Msa1453320:CDS | 40.0% | |
| AAAGGGTTGCATTGCAATTG+AGG | - | tig0034569:29355-29374 | None:intergenic | 40.0% | |
| GAACTGTTAAGCAAGCAGAA+AGG | - | tig0034569:29373-29392 | None:intergenic | 40.0% | |
| ! | TAAGCATTGTAGCTATTCGC+TGG | - | tig0034569:29413-29432 | None:intergenic | 40.0% |
| CTTCTCACTTTCGTCACAAT+CGG | + | tig0034569:28668-28687 | Msa1453320:CDS | 40.0% | |
| CGTCGTTATTATAACCTCTG+GGG | - | tig0034569:28882-28901 | None:intergenic | 40.0% | |
| GTCGTCGTTATTATAACCTC+TGG | - | tig0034569:28884-28903 | None:intergenic | 40.0% | |
| TAATTCGTGGAGACCAACTA+AGG | - | tig0034569:28951-28970 | None:intergenic | 40.0% | |
| !!! | TGAAATTTTGAGACGAGGGA+GGG | - | tig0034569:29028-29047 | None:intergenic | 40.0% |
| !!! | TTGAAATTTTGAGACGAGGG+AGG | - | tig0034569:29029-29048 | None:intergenic | 40.0% |
| AGTGATGTCAGAACAAGTTC+TGG | + | tig0034569:29084-29103 | Msa1453320:CDS | 40.0% | |
| AAAGGGTTGCATTGCAATTG+AGG | - | tig0034569:29355-29374 | None:intergenic | 40.0% | |
| GAACTGTTAAGCAAGCAGAA+AGG | - | tig0034569:29373-29392 | None:intergenic | 40.0% | |
| ! | TAAGCATTGTAGCTATTCGC+TGG | - | tig0034569:29413-29432 | None:intergenic | 40.0% |
| AATCGAATCGATGAGTCCTC+CGG | + | tig0034569:28625-28644 | Msa1453320:exon | 45.0% | |
| GAAGCACAAATCTTACGCCT+TGG | + | tig0034569:28907-28926 | Msa1453320:CDS | 45.0% | |
| TCATAACTTCCTCAGCTACG+AGG | + | tig0034569:28978-28997 | Msa1453320:CDS | 45.0% | |
| AATCACATTCCTCGTAGCTG+AGG | - | tig0034569:28990-29009 | None:intergenic | 45.0% | |
| GTCGATGCAAACACAGGAAA+GGG | + | tig0034569:29054-29073 | Msa1453320:CDS | 45.0% | |
| GAGAGCTTATGCAAGTCCTT+AGG | + | tig0034569:29199-29218 | Msa1453320:CDS | 45.0% | |
| ! | CAGTTCAATTTGAAGCGTGG+TGG | + | tig0034569:29387-29406 | Msa1453320:intron | 45.0% |
| TTAGGTGACAATGTTGAGGG+AGG | + | tig0034569:29438-29457 | Msa1453320:CDS | 45.0% | |
| TAGGTGACAATGTTGAGGGA+GGG | + | tig0034569:29439-29458 | Msa1453320:CDS | 45.0% | |
| AATCGAATCGATGAGTCCTC+CGG | + | tig0034569:28625-28644 | Msa1453320:exon | 45.0% | |
| GAAGCACAAATCTTACGCCT+TGG | + | tig0034569:28907-28926 | Msa1453320:CDS | 45.0% | |
| TCATAACTTCCTCAGCTACG+AGG | + | tig0034569:28978-28997 | Msa1453320:CDS | 45.0% | |
| AATCACATTCCTCGTAGCTG+AGG | - | tig0034569:28990-29009 | None:intergenic | 45.0% | |
| GTCGATGCAAACACAGGAAA+GGG | + | tig0034569:29054-29073 | Msa1453320:CDS | 45.0% | |
| GAGAGCTTATGCAAGTCCTT+AGG | + | tig0034569:29199-29218 | Msa1453320:CDS | 45.0% | |
| ! | CAGTTCAATTTGAAGCGTGG+TGG | + | tig0034569:29387-29406 | Msa1453320:intron | 45.0% |
| TTAGGTGACAATGTTGAGGG+AGG | + | tig0034569:29438-29457 | Msa1453320:CDS | 45.0% | |
| TAGGTGACAATGTTGAGGGA+GGG | + | tig0034569:29439-29458 | Msa1453320:CDS | 45.0% | |
| AACACAATCTTCATCGCCGG+AGG | - | tig0034569:28644-28663 | None:intergenic | 50.0% | |
| CCGAACACAATCTTCATCGC+CGG | - | tig0034569:28647-28666 | None:intergenic | 50.0% | |
| CCGGCGATGAAGATTGTGTT+CGG | + | tig0034569:28644-28663 | Msa1453320:CDS | 50.0% | |
| TGCAGGTGCTCTCTCTCAAT+TGG | + | tig0034569:28795-28814 | Msa1453320:intron | 50.0% | |
| TCAAGATCACTACTCCCCAG+AGG | + | tig0034569:28865-28884 | Msa1453320:CDS | 50.0% | |
| GGAGACCAACTAAGGACTTC+AGG | - | tig0034569:28943-28962 | None:intergenic | 50.0% | |
| ACTGTCGTCGATGCAAACAC+AGG | + | tig0034569:29048-29067 | Msa1453320:CDS | 50.0% | |
| CGTCGATGCAAACACAGGAA+AGG | + | tig0034569:29053-29072 | Msa1453320:CDS | 50.0% | |
| AGGTGACAATGTTGAGGGAG+GGG | + | tig0034569:29440-29459 | Msa1453320:CDS | 50.0% | |
| AACACAATCTTCATCGCCGG+AGG | - | tig0034569:28644-28663 | None:intergenic | 50.0% | |
| CCGAACACAATCTTCATCGC+CGG | - | tig0034569:28647-28666 | None:intergenic | 50.0% | |
| CCGGCGATGAAGATTGTGTT+CGG | + | tig0034569:28644-28663 | Msa1453320:CDS | 50.0% | |
| TGCAGGTGCTCTCTCTCAAT+TGG | + | tig0034569:28795-28814 | Msa1453320:intron | 50.0% | |
| TCAAGATCACTACTCCCCAG+AGG | + | tig0034569:28865-28884 | Msa1453320:CDS | 50.0% | |
| GGAGACCAACTAAGGACTTC+AGG | - | tig0034569:28943-28962 | None:intergenic | 50.0% | |
| ACTGTCGTCGATGCAAACAC+AGG | + | tig0034569:29048-29067 | Msa1453320:CDS | 50.0% | |
| CGTCGATGCAAACACAGGAA+AGG | + | tig0034569:29053-29072 | Msa1453320:CDS | 50.0% | |
| AGGTGACAATGTTGAGGGAG+GGG | + | tig0034569:29440-29459 | Msa1453320:CDS | 50.0% | |
| GGGAAACGCATTTCCCATCG+TGG | + | tig0034569:29460-29479 | Msa1453320:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034569 | gene | 28541 | 29479 | 28541 | ID=Msa1453320;Name=Msa1453320 |
| tig0034569 | mRNA | 28541 | 29479 | 28541 | ID=Msa1453320-mRNA-1;Parent=Msa1453320;Name=Msa1453320-mRNA-1;_AED=0.09;_eAED=0.09;_QI=94|1|0.66|1|1|1|3|0|210 |
| tig0034569 | exon | 28541 | 28701 | 28541 | ID=Msa1453320-mRNA-1:exon:19077;Parent=Msa1453320-mRNA-1 |
| tig0034569 | exon | 28800 | 29272 | 28800 | ID=Msa1453320-mRNA-1:exon:19078;Parent=Msa1453320-mRNA-1 |
| tig0034569 | exon | 29390 | 29479 | 29390 | ID=Msa1453320-mRNA-1:exon:19079;Parent=Msa1453320-mRNA-1 |
| tig0034569 | five_prime_UTR | 28541 | 28634 | 28541 | ID=Msa1453320-mRNA-1:five_prime_utr;Parent=Msa1453320-mRNA-1 |
| tig0034569 | CDS | 28635 | 28701 | 28635 | ID=Msa1453320-mRNA-1:cds;Parent=Msa1453320-mRNA-1 |
| tig0034569 | CDS | 28800 | 29272 | 28800 | ID=Msa1453320-mRNA-1:cds;Parent=Msa1453320-mRNA-1 |
| tig0034569 | CDS | 29390 | 29479 | 29390 | ID=Msa1453320-mRNA-1:cds;Parent=Msa1453320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
