Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416470 | sp|Q09893|YAI5_SCHPO | 33.480 | 227 | 136 | 9 | 9 | 226 | 3 | 223 | 9.26e-21 | 90.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416470 | I3SRG9 | 97.189 | 249 | 7 | 0 | 1 | 249 | 9 | 257 | 0.0 | 508 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024890 | Msa1416470 | 0.821584 | 3.735766e-53 | -8.615850e-47 |
| Msa0034310 | Msa1416470 | 0.993485 | 4.620542e-200 | -8.615850e-47 |
| Msa0081310 | Msa1416470 | 0.998548 | 2.124677e-268 | -8.615850e-47 |
| Msa1370630 | Msa1416470 | -0.802071 | 6.674968e-49 | -8.615850e-47 |
| Msa1412760 | Msa1416470 | 0.981737 | 2.535706e-153 | -8.615850e-47 |
| Msa1416470 | Msa1449670 | 0.992489 | 1.351517e-193 | -8.615850e-47 |
| Msa1416470 | Msa1457070 | -0.823212 | 1.563754e-53 | -8.615850e-47 |
| Msa0722930 | Msa1416470 | -0.818333 | 2.070043e-52 | -8.615850e-47 |
| Msa0723140 | Msa1416470 | -0.812556 | 3.994506e-51 | -8.615850e-47 |
| Msa0745460 | Msa1416470 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa0796430 | Msa1416470 | 0.818714 | 1.697020e-52 | -8.615850e-47 |
| Msa0811000 | Msa1416470 | -0.803734 | 3.026565e-49 | -8.615850e-47 |
| Msa0834270 | Msa1416470 | 0.838974 | 2.090403e-57 | -8.615850e-47 |
| Msa0139720 | Msa1416470 | 0.812669 | 3.774852e-51 | -8.615850e-47 |
| Msa0173620 | Msa1416470 | 0.998098 | 4.146947e-256 | -8.615850e-47 |
| Msa1287160 | Msa1416470 | -0.816138 | 6.453666e-52 | -8.615850e-47 |
| Msa0465970 | Msa1416470 | -0.814423 | 1.552388e-51 | -8.615850e-47 |
| Msa1002990 | Msa1416470 | 0.999331 | 9.720170e-304 | -8.615850e-47 |
| Msa1080790 | Msa1416470 | -0.822820 | 1.930951e-53 | -8.615850e-47 |
| Msa0242700 | Msa1416470 | 0.861363 | 1.081304e-63 | -8.615850e-47 |
| Msa0280950 | Msa1416470 | 0.808356 | 3.223594e-50 | -8.615850e-47 |
| Msa0304990 | Msa1416470 | -0.807694 | 4.461159e-50 | -8.615850e-47 |
| Msa1118930 | Msa1416470 | -0.816778 | 4.640265e-52 | -8.615850e-47 |
| Msa1132560 | Msa1416470 | 0.816031 | 6.819226e-52 | -8.615850e-47 |
| Msa1194940 | Msa1416470 | -0.805356 | 1.388653e-49 | -8.615850e-47 |
| Msa0921080 | Msa1416470 | -0.816955 | 4.234957e-52 | -8.615850e-47 |
| Msa0951720 | Msa1416470 | -0.817245 | 3.644826e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416470 | MtrunA17_Chr1g0193721 | 97.189 | 249 | 7 | 0 | 1 | 249 | 1 | 249 | 0.0 | 506 |
| Msa1416470 | MtrunA17_Chr7g0238911 | 51.042 | 288 | 93 | 2 | 10 | 249 | 14 | 301 | 2.71e-101 | 296 |
| Msa1416470 | MtrunA17_Chr2g0328451 | 49.129 | 287 | 107 | 3 | 2 | 249 | 5 | 291 | 2.26e-96 | 284 |
| Msa1416470 | MtrunA17_Chr4g0031841 | 50.545 | 275 | 106 | 3 | 4 | 249 | 8 | 281 | 5.05e-96 | 282 |
| Msa1416470 | MtrunA17_Chr4g0009921 | 51.111 | 270 | 87 | 2 | 4 | 228 | 9 | 278 | 1.81e-94 | 279 |
| Msa1416470 | MtrunA17_Chr4g0009961 | 47.751 | 289 | 102 | 1 | 10 | 249 | 12 | 300 | 1.16e-91 | 272 |
| Msa1416470 | MtrunA17_Chr1g0205581 | 48.511 | 235 | 111 | 4 | 11 | 235 | 10 | 244 | 2.17e-76 | 232 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416470 | AT3G62040.1 | 71.698 | 212 | 57 | 3 | 41 | 249 | 1 | 212 | 1.64e-107 | 309 |
| Msa1416470 | AT5G59480.4 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 2.07e-98 | 289 |
| Msa1416470 | AT5G59480.5 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 2.07e-98 | 289 |
| Msa1416470 | AT5G59480.3 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 2.07e-98 | 289 |
| Msa1416470 | AT5G59480.1 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 2.07e-98 | 289 |
| Msa1416470 | AT5G59480.2 | 50.549 | 273 | 103 | 3 | 4 | 245 | 8 | 279 | 4.86e-96 | 283 |
| Msa1416470 | AT5G02230.2 | 52.060 | 267 | 101 | 3 | 10 | 249 | 14 | 280 | 1.64e-88 | 264 |
| Msa1416470 | AT5G02230.1 | 52.060 | 267 | 101 | 3 | 10 | 249 | 14 | 280 | 1.64e-88 | 264 |
| Msa1416470 | AT5G59490.1 | 52.918 | 257 | 104 | 3 | 10 | 249 | 10 | 266 | 7.43e-88 | 261 |
| Msa1416470 | AT5G02230.3 | 52.060 | 267 | 101 | 3 | 10 | 249 | 51 | 317 | 8.78e-88 | 263 |
| Msa1416470 | AT2G32150.1 | 48.649 | 222 | 107 | 2 | 13 | 227 | 8 | 229 | 4.30e-78 | 236 |
| Msa1416470 | AT5G59490.2 | 57.635 | 203 | 74 | 2 | 10 | 200 | 10 | 212 | 4.04e-72 | 219 |
| Msa1416470 | AT2G32150.2 | 49.490 | 196 | 92 | 2 | 12 | 200 | 7 | 202 | 4.01e-67 | 207 |
| Msa1416470 | AT2G32150.3 | 50.286 | 175 | 80 | 2 | 13 | 180 | 8 | 182 | 3.81e-59 | 186 |
Find 79 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCAACCTCCCATATTTC+AGG | 0.199588 | tig0024351:+63633 | None:intergenic |
| CAATTAAACACCATAGTTTA+AGG | 0.205482 | tig0024351:-65481 | Msa1416470:five_prime_UTR |
| GAGAAGCATTACCTGAAATA+TGG | 0.252058 | tig0024351:-63644 | Msa1416470:CDS |
| ATTGAGCTTAGGGATCAATT+TGG | 0.335151 | tig0024351:-64793 | Msa1416470:CDS |
| AATACCTGGACCTTAAACTA+TGG | 0.336568 | tig0024351:+65471 | None:intergenic |
| ATTCGTTGGTAGGAGTTGAT+AGG | 0.339282 | tig0024351:+64113 | None:intergenic |
| TTGCAATTGGCATCACAAAA+TGG | 0.340643 | tig0024351:-63415 | Msa1416470:three_prime_UTR |
| AGGTTCCTTAACACGAAATC+TGG | 0.347342 | tig0024351:+64342 | None:intergenic |
| AATATACCGAACGAAATTAC+TGG | 0.354237 | tig0024351:-63347 | Msa1416470:three_prime_UTR |
| GGCTTGGAAGATTGCTTTGA+GGG | 0.359868 | tig0024351:-64161 | Msa1416470:CDS |
| ATGGATACTCAAAGGATTGC+TGG | 0.374412 | tig0024351:-64988 | Msa1416470:CDS |
| TGAACTTTGCATTTAATAGT+TGG | 0.387686 | tig0024351:+63389 | None:intergenic |
| ACCATCTGTGGAAGCCTTTG+AGG | 0.394435 | tig0024351:-64081 | Msa1416470:CDS |
| CTCTCTACCCATTGAGCTTA+GGG | 0.404141 | tig0024351:-64803 | Msa1416470:CDS |
| TCTGGCTTCAGTTTCTCATA+TGG | 0.405723 | tig0024351:+64360 | None:intergenic |
| ATATACTCGTAACAGTGATC+TGG | 0.410966 | tig0024351:+63224 | None:intergenic |
| TACAAATCCAGACACATCTT+TGG | 0.424509 | tig0024351:+64592 | None:intergenic |
| AAATGTATGAATCTTGCAAT+TGG | 0.426552 | tig0024351:-63428 | Msa1416470:three_prime_UTR |
| ACTCTCTACCCATTGAGCTT+AGG | 0.439304 | tig0024351:-64804 | Msa1416470:CDS |
| TGAAGCCAGATTTCGTGTTA+AGG | 0.440016 | tig0024351:-64347 | Msa1416470:CDS |
| TTAATTTCCTGTCAGGCCCT+TGG | 0.440659 | tig0024351:-64432 | Msa1416470:intron |
| TGGCTTCGACTGCAAGAGAT+TGG | 0.449210 | tig0024351:+63589 | None:intergenic |
| TGGCTTGGAAGATTGCTTTG+AGG | 0.450052 | tig0024351:-64162 | Msa1416470:CDS |
| TCTAGAACATGGAACAACTA+TGG | 0.451217 | tig0024351:-64569 | Msa1416470:CDS |
| TTCGTTGGTAGGAGTTGATA+GGG | 0.461128 | tig0024351:+64114 | None:intergenic |
| TATAGTACCAAAGATGTGTC+TGG | 0.470960 | tig0024351:-64599 | Msa1416470:CDS |
| AAATTGATCCCTAAGCTCAA+TGG | 0.472577 | tig0024351:+64795 | None:intergenic |
| AGTTCTCAGCAGGCTTGGCT+TGG | 0.483634 | tig0024351:-64177 | Msa1416470:CDS |
| GGTCGATCGGATTTAGTGCC+TGG | 0.483986 | tig0024351:-63702 | Msa1416470:CDS |
| GCCTCAAAGGCTTCCACAGA+TGG | 0.484285 | tig0024351:+64080 | None:intergenic |
| GTTGAAGTTCTCAGCAGGCT+TGG | 0.485005 | tig0024351:-64182 | Msa1416470:CDS |
| AATTGATCCCTAAGCTCAAT+GGG | 0.491033 | tig0024351:+64796 | None:intergenic |
| AACACCATAGTTTAAGGTCC+AGG | 0.491638 | tig0024351:-65475 | Msa1416470:intron |
| GTTGCAAGCGGAAAAGTAGC+TGG | 0.495148 | tig0024351:-63858 | Msa1416470:CDS |
| TAGTCTACCTTGCACAAACT+AGG | 0.497605 | tig0024351:+63277 | None:intergenic |
| AGAAGCATTACCTGAAATAT+GGG | 0.503577 | tig0024351:-63643 | Msa1416470:CDS |
| CTATCAACCACGCCGTCTCC+AGG | 0.503877 | tig0024351:-63257 | Msa1416470:three_prime_UTR |
| GAGATTGGATCATTTGTTGT+TGG | 0.507343 | tig0024351:+63604 | None:intergenic |
| GATTCAAAGCTCTTTCAAGA+TGG | 0.508100 | tig0024351:-65007 | Msa1416470:exon |
| GCTTTCTTTAAGACGTTTCG+CGG | 0.509643 | tig0024351:-63306 | Msa1416470:three_prime_UTR |
| CTTGTTTACAGAGCATATGT+TGG | 0.516527 | tig0024351:-64644 | Msa1416470:intron |
| AACAACTATGGCAGGAATGA+AGG | 0.518265 | tig0024351:-64557 | Msa1416470:intron |
| ATGCGGTTGAAGTTCTCAGC+AGG | 0.526884 | tig0024351:-64187 | Msa1416470:CDS |
| TTTGCAGAGGATTCGTTGGT+AGG | 0.536737 | tig0024351:+64103 | None:intergenic |
| GAACATGGAACAACTATGGC+AGG | 0.541348 | tig0024351:-64565 | Msa1416470:CDS |
| ACTCACCCAGTAATTTCGTT+CGG | 0.548375 | tig0024351:+63341 | None:intergenic |
| AATCCTCTGCAAACCATCTG+TGG | 0.549541 | tig0024351:-64093 | Msa1416470:CDS |
| CATTGTCAAATTCGTAGCCA+AGG | 0.549744 | tig0024351:+64415 | None:intergenic |
| TTCAGAGCATGGTCAGCACC+AGG | 0.555322 | tig0024351:+63684 | None:intergenic |
| ATCGAAGCAAAACTTATGCA+TGG | 0.557183 | tig0024351:+63562 | None:intergenic |
| ATCTCTTGCAGTCGAAGCCA+CGG | 0.558687 | tig0024351:-63586 | Msa1416470:CDS |
| ATGGTTTGCAGAGGATTCGT+TGG | 0.560194 | tig0024351:+64099 | None:intergenic |
| TATACTCGTAACAGTGATCT+GGG | 0.563092 | tig0024351:+63225 | None:intergenic |
| GAGTTTCATGCTTATGTGCA+TGG | 0.564136 | tig0024351:-64390 | Msa1416470:CDS |
| TTACTGGGTGAGTCACGACC+AGG | 0.566531 | tig0024351:-63331 | Msa1416470:three_prime_UTR |
| CTGGATTTGTATCTAGAACA+TGG | 0.570926 | tig0024351:-64580 | Msa1416470:CDS |
| TTGATGACAGGTGGGTCGAT+CGG | 0.573116 | tig0024351:-63715 | Msa1416470:intron |
| AGTCTACCTTGCACAAACTA+GGG | 0.574113 | tig0024351:+63278 | None:intergenic |
| TATGAATGCTGTTCAGAGCA+TGG | 0.576032 | tig0024351:+63673 | None:intergenic |
| CTTTCAAGATGGATACTCAA+AGG | 0.580368 | tig0024351:-64996 | Msa1416470:exon |
| CGCATGTGCGTGATCTGCGT+TGG | 0.594208 | tig0024351:+64205 | None:intergenic |
| CTTCCACAGATGGTTTGCAG+AGG | 0.599046 | tig0024351:+64090 | None:intergenic |
| AATTCTAATAGCAGCCTCAA+AGG | 0.600461 | tig0024351:+64067 | None:intergenic |
| ATATACCGAACGAAATTACT+GGG | 0.604916 | tig0024351:-63346 | Msa1416470:three_prime_UTR |
| ATTTAAGCACCACCATGCCA+TGG | 0.607196 | tig0024351:+63447 | None:intergenic |
| TTGTAATGGCCTCCATGGCA+TGG | 0.611695 | tig0024351:-63459 | Msa1416470:three_prime_UTR |
| GCATGTCGCAAGAACATACA+AGG | 0.614967 | tig0024351:-64771 | Msa1416470:intron |
| ATTGTCAAATTCGTAGCCAA+GGG | 0.618916 | tig0024351:+64416 | None:intergenic |
| AGTGTTAGAAATGTTGCAAG+CGG | 0.624326 | tig0024351:-63870 | Msa1416470:CDS |
| GCTGAGGCATGGAAAGCAGA+AGG | 0.639829 | tig0024351:+64322 | None:intergenic |
| AGATAGACAAAACTCTGCTG+AGG | 0.650985 | tig0024351:+63497 | None:intergenic |
| CAACGCAGATCACGCACATG+CGG | 0.653925 | tig0024351:-64204 | Msa1416470:CDS |
| GCACTACCCTAGTTTGTGCA+AGG | 0.661073 | tig0024351:-63284 | Msa1416470:three_prime_UTR |
| ACGTCTTAAAGAAAGCGACC+TGG | 0.675817 | tig0024351:+63313 | None:intergenic |
| AGCATTACCTGAAATATGGG+AGG | 0.676770 | tig0024351:-63640 | Msa1416470:CDS |
| TAATGGCCTCCATGGCATGG+TGG | 0.680313 | tig0024351:-63456 | Msa1416470:three_prime_UTR |
| TAAGCACCACCATGCCATGG+AGG | 0.695428 | tig0024351:+63450 | None:intergenic |
| CAAAACTTATGCATGGACCG+TGG | 0.699924 | tig0024351:+63569 | None:intergenic |
| TATATCTTACAATAACAGTG+TGG | 0.713748 | tig0024351:+63832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATGTATTATTTTATTATA+TGG | - | tig0024351:63346-63365 | Msa1416470:three_prime_UTR | 10.0% |
| !!! | TTAAAAGTAAATATTGATTA+TGG | - | tig0024351:63862-63881 | Msa1416470:CDS | 10.0% |
| !!! | TGATGTATTATTTTATTATA+TGG | - | tig0024351:63346-63365 | Msa1416470:three_prime_UTR | 10.0% |
| !!! | TTAAAAGTAAATATTGATTA+TGG | - | tig0024351:63862-63881 | Msa1416470:CDS | 10.0% |
| !!! | GAAAAGTATATAAAAACTAA+AGG | + | tig0024351:63281-63300 | None:intergenic | 15.0% |
| !!! | AAAGAATATTTTGAGTATTA+CGG | + | tig0024351:64486-64505 | None:intergenic | 15.0% |
| !!! | AATCTACAATAATTTTGTAA+TGG | - | tig0024351:65249-65268 | Msa1416470:intron | 15.0% |
| !!! | GAAAAGTATATAAAAACTAA+AGG | + | tig0024351:63281-63300 | None:intergenic | 15.0% |
| !!! | AAAGAATATTTTGAGTATTA+CGG | + | tig0024351:64486-64505 | None:intergenic | 15.0% |
| !!! | AATCTACAATAATTTTGTAA+TGG | - | tig0024351:65249-65268 | Msa1416470:intron | 15.0% |
| !! | TAATAATCTTGCATGAATAT+TGG | - | tig0024351:63794-63813 | Msa1416470:intron | 20.0% |
| !! | TTCTATATGAAAATTTGAAG+AGG | + | tig0024351:63837-63856 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATATAGA+AGG | - | tig0024351:63836-63855 | Msa1416470:intron | 20.0% |
| !! | TAATAATCTTGCATGAATAT+TGG | - | tig0024351:63794-63813 | Msa1416470:intron | 20.0% |
| !! | TTCTATATGAAAATTTGAAG+AGG | + | tig0024351:63837-63856 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATATAGA+AGG | - | tig0024351:63836-63855 | Msa1416470:intron | 20.0% |
| ! | CAATTAAACACCATAGTTTA+AGG | - | tig0024351:63241-63260 | Msa1416470:three_prime_UTR | 25.0% |
| ! | AATATCAAGACCTTAATGAA+AGG | + | tig0024351:63311-63330 | None:intergenic | 25.0% |
| ! | TATTATATGGTCCATAATGA+TGG | - | tig0024351:63359-63378 | Msa1416470:three_prime_UTR | 25.0% |
| ! | TTGATCATCAATCATTTCAT+GGG | + | tig0024351:63420-63439 | None:intergenic | 25.0% |
| ! | TTTGATCATCAATCATTTCA+TGG | + | tig0024351:63421-63440 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTCAGACTTTT+CGG | - | tig0024351:63571-63590 | Msa1416470:exon | 25.0% |
| ! | ATATGAAATAATCTGAACAC+TGG | + | tig0024351:64015-64034 | None:intergenic | 25.0% |
| ! | AAACAAGATTGATCAACTAT+AGG | + | tig0024351:64065-64084 | None:intergenic | 25.0% |
| ! | AGTAAGTCAATAAAAAACTG+TGG | + | tig0024351:64210-64229 | None:intergenic | 25.0% |
| !! | ATCAATCTTACTGTTTTCTT+TGG | + | tig0024351:64693-64712 | None:intergenic | 25.0% |
| ! | TATATCTTACAATAACAGTG+TGG | + | tig0024351:64893-64912 | None:intergenic | 25.0% |
| ! | AAATGTATGAATCTTGCAAT+TGG | - | tig0024351:65294-65313 | Msa1416470:intron | 25.0% |
| ! | TGAACTTTGCATTTAATAGT+TGG | + | tig0024351:65336-65355 | None:intergenic | 25.0% |
| ! | CAATTAAACACCATAGTTTA+AGG | - | tig0024351:63241-63260 | Msa1416470:three_prime_UTR | 25.0% |
| ! | AATATCAAGACCTTAATGAA+AGG | + | tig0024351:63311-63330 | None:intergenic | 25.0% |
| ! | TATTATATGGTCCATAATGA+TGG | - | tig0024351:63359-63378 | Msa1416470:three_prime_UTR | 25.0% |
| ! | TTGATCATCAATCATTTCAT+GGG | + | tig0024351:63420-63439 | None:intergenic | 25.0% |
| ! | TTTGATCATCAATCATTTCA+TGG | + | tig0024351:63421-63440 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTCAGACTTTT+CGG | - | tig0024351:63571-63590 | Msa1416470:exon | 25.0% |
| ! | ATATGAAATAATCTGAACAC+TGG | + | tig0024351:64015-64034 | None:intergenic | 25.0% |
| ! | AAACAAGATTGATCAACTAT+AGG | + | tig0024351:64065-64084 | None:intergenic | 25.0% |
| ! | AGTAAGTCAATAAAAAACTG+TGG | + | tig0024351:64210-64229 | None:intergenic | 25.0% |
| !! | ATCAATCTTACTGTTTTCTT+TGG | + | tig0024351:64693-64712 | None:intergenic | 25.0% |
| ! | TATATCTTACAATAACAGTG+TGG | + | tig0024351:64893-64912 | None:intergenic | 25.0% |
| ! | AAATGTATGAATCTTGCAAT+TGG | - | tig0024351:65294-65313 | Msa1416470:intron | 25.0% |
| ! | TGAACTTTGCATTTAATAGT+TGG | + | tig0024351:65336-65355 | None:intergenic | 25.0% |
| AAACTAAAGGAAACAATACC+TGG | + | tig0024351:63268-63287 | None:intergenic | 30.0% | |
| TGATCACAGAATTAAATGCT+AGG | + | tig0024351:63447-63466 | None:intergenic | 30.0% | |
| CAACAAGTATGTCTTTCTTA+TGG | - | tig0024351:63465-63484 | Msa1416470:three_prime_UTR | 30.0% | |
| GTCTTTCTTATGGTCAAATT+TGG | - | tig0024351:63475-63494 | Msa1416470:three_prime_UTR | 30.0% | |
| !! | TCTTTGAAACGTACTTTGTT+AGG | - | tig0024351:63529-63548 | Msa1416470:three_prime_UTR | 30.0% |
| ! | TTTTCTTTGTTCTTTCTCCA+AGG | + | tig0024351:63664-63683 | None:intergenic | 30.0% |
| !!! | GCACTCATAGTTTATTTTAG+AGG | - | tig0024351:63979-63998 | Msa1416470:intron | 30.0% |
| TTAAGTCTTAATTTCCTGTC+AGG | - | tig0024351:64283-64302 | Msa1416470:intron | 30.0% | |
| ATGCTCTTTAATGAACAAAC+TGG | + | tig0024351:64463-64482 | None:intergenic | 30.0% | |
| TACTTACCTAAAAAGTGACA+TGG | - | tig0024351:64713-64732 | Msa1416470:intron | 30.0% | |
| ! | GAGAGATTACTTCTTTTATG+TGG | - | tig0024351:64735-64754 | Msa1416470:intron | 30.0% |
| !!! | CTATAGATTTTTTTACCCCT+AGG | - | tig0024351:64764-64783 | Msa1416470:intron | 30.0% |
| TTCTATCTATGCATCATATG+TGG | - | tig0024351:64916-64935 | Msa1416470:intron | 30.0% | |
| ! | AGTAACAACATATTGATGAC+AGG | - | tig0024351:64995-65014 | Msa1416470:exon | 30.0% |
| !! | AGAAGCATTACCTGAAATAT+GGG | - | tig0024351:65079-65098 | Msa1416470:intron | 30.0% |
| AATATACCGAACGAAATTAC+TGG | - | tig0024351:65375-65394 | Msa1416470:intron | 30.0% | |
| ATATACCGAACGAAATTACT+GGG | - | tig0024351:65376-65395 | Msa1416470:intron | 30.0% | |
| AAACTAAAGGAAACAATACC+TGG | + | tig0024351:63268-63287 | None:intergenic | 30.0% | |
| TGATCACAGAATTAAATGCT+AGG | + | tig0024351:63447-63466 | None:intergenic | 30.0% | |
| CAACAAGTATGTCTTTCTTA+TGG | - | tig0024351:63465-63484 | Msa1416470:three_prime_UTR | 30.0% | |
| GTCTTTCTTATGGTCAAATT+TGG | - | tig0024351:63475-63494 | Msa1416470:three_prime_UTR | 30.0% | |
| !! | TCTTTGAAACGTACTTTGTT+AGG | - | tig0024351:63529-63548 | Msa1416470:three_prime_UTR | 30.0% |
| ! | TTTTCTTTGTTCTTTCTCCA+AGG | + | tig0024351:63664-63683 | None:intergenic | 30.0% |
| !!! | GCACTCATAGTTTATTTTAG+AGG | - | tig0024351:63979-63998 | Msa1416470:intron | 30.0% |
| TTAAGTCTTAATTTCCTGTC+AGG | - | tig0024351:64283-64302 | Msa1416470:intron | 30.0% | |
| ATGCTCTTTAATGAACAAAC+TGG | + | tig0024351:64463-64482 | None:intergenic | 30.0% | |
| TACTTACCTAAAAAGTGACA+TGG | - | tig0024351:64713-64732 | Msa1416470:intron | 30.0% | |
| ! | GAGAGATTACTTCTTTTATG+TGG | - | tig0024351:64735-64754 | Msa1416470:intron | 30.0% |
| !!! | CTATAGATTTTTTTACCCCT+AGG | - | tig0024351:64764-64783 | Msa1416470:intron | 30.0% |
| TTCTATCTATGCATCATATG+TGG | - | tig0024351:64916-64935 | Msa1416470:intron | 30.0% | |
| ! | AGTAACAACATATTGATGAC+AGG | - | tig0024351:64995-65014 | Msa1416470:exon | 30.0% |
| !! | AGAAGCATTACCTGAAATAT+GGG | - | tig0024351:65079-65098 | Msa1416470:intron | 30.0% |
| AATATACCGAACGAAATTAC+TGG | - | tig0024351:65375-65394 | Msa1416470:intron | 30.0% | |
| ATATACCGAACGAAATTACT+GGG | - | tig0024351:65376-65395 | Msa1416470:intron | 30.0% | |
| AATACCTGGACCTTAAACTA+TGG | + | tig0024351:63254-63273 | None:intergenic | 35.0% | |
| TTCCATTCCACCTTTCATTA+AGG | - | tig0024351:63298-63317 | Msa1416470:three_prime_UTR | 35.0% | |
| ATCAAGACCTTAATGAAAGG+TGG | + | tig0024351:63308-63327 | None:intergenic | 35.0% | |
| AGTAACGTTGTCCATCATTA+TGG | + | tig0024351:63373-63392 | None:intergenic | 35.0% | |
| !! | GTGTTGATCGCTTAGATTTT+TGG | - | tig0024351:63499-63518 | Msa1416470:three_prime_UTR | 35.0% |
| TAAGATCTCAAAACTTGCCT+TGG | - | tig0024351:63644-63663 | Msa1416470:CDS | 35.0% | |
| GATTCAAAGCTCTTTCAAGA+TGG | - | tig0024351:63715-63734 | Msa1416470:intron | 35.0% | |
| CTTTCAAGATGGATACTCAA+AGG | - | tig0024351:63726-63745 | Msa1416470:intron | 35.0% | |
| !! | AAATACGAGTGCTTGCTTTT+TGG | - | tig0024351:63761-63780 | Msa1416470:intron | 35.0% |
| !!! | TGCTTGCTTTTTGGTATGAA+TGG | - | tig0024351:63770-63789 | Msa1416470:intron | 35.0% |
| TTGATTATGGTTCCACATGT+TGG | - | tig0024351:63875-63894 | Msa1416470:CDS | 35.0% | |
| TATCTGTTGTTACCAACATG+TGG | + | tig0024351:63890-63909 | None:intergenic | 35.0% | |
| !! | CATGTTGGTAACAACAGATA+TGG | - | tig0024351:63890-63909 | Msa1416470:intron | 35.0% |
| AATTGATCCCTAAGCTCAAT+GGG | + | tig0024351:63929-63948 | None:intergenic | 35.0% | |
| AAATTGATCCCTAAGCTCAA+TGG | + | tig0024351:63930-63949 | None:intergenic | 35.0% | |
| ATTGAGCTTAGGGATCAATT+TGG | - | tig0024351:63929-63948 | Msa1416470:intron | 35.0% | |
| CTTGTTTACAGAGCATATGT+TGG | - | tig0024351:64078-64097 | Msa1416470:CDS | 35.0% | |
| TATAGTACCAAAGATGTGTC+TGG | - | tig0024351:64123-64142 | Msa1416470:CDS | 35.0% | |
| TACAAATCCAGACACATCTT+TGG | + | tig0024351:64133-64152 | None:intergenic | 35.0% | |
| ! | CTGGATTTGTATCTAGAACA+TGG | - | tig0024351:64142-64161 | Msa1416470:CDS | 35.0% |
| ! | TCTAGAACATGGAACAACTA+TGG | - | tig0024351:64153-64172 | Msa1416470:CDS | 35.0% |
| ATTGTCAAATTCGTAGCCAA+GGG | + | tig0024351:64309-64328 | None:intergenic | 35.0% | |
| GTAAAATCGTACGTGGAAAA+AGG | - | tig0024351:64423-64442 | Msa1416470:intron | 35.0% | |
| AATTCTAATAGCAGCCTCAA+AGG | + | tig0024351:64658-64677 | None:intergenic | 35.0% | |
| !!! | ATCTCTCCATGTCACTTTTT+AGG | + | tig0024351:64722-64741 | None:intergenic | 35.0% |
| TTCCAAGAGTTTCAAACCTA+GGG | + | tig0024351:64783-64802 | None:intergenic | 35.0% | |
| ATTCCAAGAGTTTCAAACCT+AGG | + | tig0024351:64784-64803 | None:intergenic | 35.0% | |
| AGTGTTAGAAATGTTGCAAG+CGG | - | tig0024351:64852-64871 | Msa1416470:intron | 35.0% | |
| ! | AACAACATATTGATGACAGG+TGG | - | tig0024351:64998-65017 | Msa1416470:exon | 35.0% |
| ! | ACAACATATTGATGACAGGT+GGG | - | tig0024351:64999-65018 | Msa1416470:exon | 35.0% |
| !! | GAGAAGCATTACCTGAAATA+TGG | - | tig0024351:65078-65097 | Msa1416470:intron | 35.0% |
| !! | GAGATTGGATCATTTGTTGT+TGG | + | tig0024351:65121-65140 | None:intergenic | 35.0% |
| ATCGAAGCAAAACTTATGCA+TGG | + | tig0024351:65163-65182 | None:intergenic | 35.0% | |
| ! | TAATTTTGTAATGGCCTCCA+TGG | - | tig0024351:65258-65277 | Msa1416470:intron | 35.0% |
| TTGCAATTGGCATCACAAAA+TGG | - | tig0024351:65307-65326 | Msa1416470:intron | 35.0% | |
| AATACCTGGACCTTAAACTA+TGG | + | tig0024351:63254-63273 | None:intergenic | 35.0% | |
| TTCCATTCCACCTTTCATTA+AGG | - | tig0024351:63298-63317 | Msa1416470:three_prime_UTR | 35.0% | |
| ATCAAGACCTTAATGAAAGG+TGG | + | tig0024351:63308-63327 | None:intergenic | 35.0% | |
| AGTAACGTTGTCCATCATTA+TGG | + | tig0024351:63373-63392 | None:intergenic | 35.0% | |
| !! | GTGTTGATCGCTTAGATTTT+TGG | - | tig0024351:63499-63518 | Msa1416470:three_prime_UTR | 35.0% |
| TAAGATCTCAAAACTTGCCT+TGG | - | tig0024351:63644-63663 | Msa1416470:CDS | 35.0% | |
| GATTCAAAGCTCTTTCAAGA+TGG | - | tig0024351:63715-63734 | Msa1416470:intron | 35.0% | |
| CTTTCAAGATGGATACTCAA+AGG | - | tig0024351:63726-63745 | Msa1416470:intron | 35.0% | |
| !! | AAATACGAGTGCTTGCTTTT+TGG | - | tig0024351:63761-63780 | Msa1416470:intron | 35.0% |
| !!! | TGCTTGCTTTTTGGTATGAA+TGG | - | tig0024351:63770-63789 | Msa1416470:intron | 35.0% |
| TTGATTATGGTTCCACATGT+TGG | - | tig0024351:63875-63894 | Msa1416470:CDS | 35.0% | |
| TATCTGTTGTTACCAACATG+TGG | + | tig0024351:63890-63909 | None:intergenic | 35.0% | |
| !! | CATGTTGGTAACAACAGATA+TGG | - | tig0024351:63890-63909 | Msa1416470:intron | 35.0% |
| AATTGATCCCTAAGCTCAAT+GGG | + | tig0024351:63929-63948 | None:intergenic | 35.0% | |
| AAATTGATCCCTAAGCTCAA+TGG | + | tig0024351:63930-63949 | None:intergenic | 35.0% | |
| ATTGAGCTTAGGGATCAATT+TGG | - | tig0024351:63929-63948 | Msa1416470:intron | 35.0% | |
| CTTGTTTACAGAGCATATGT+TGG | - | tig0024351:64078-64097 | Msa1416470:CDS | 35.0% | |
| TATAGTACCAAAGATGTGTC+TGG | - | tig0024351:64123-64142 | Msa1416470:CDS | 35.0% | |
| TACAAATCCAGACACATCTT+TGG | + | tig0024351:64133-64152 | None:intergenic | 35.0% | |
| ! | CTGGATTTGTATCTAGAACA+TGG | - | tig0024351:64142-64161 | Msa1416470:CDS | 35.0% |
| ! | TCTAGAACATGGAACAACTA+TGG | - | tig0024351:64153-64172 | Msa1416470:CDS | 35.0% |
| ATTGTCAAATTCGTAGCCAA+GGG | + | tig0024351:64309-64328 | None:intergenic | 35.0% | |
| GTAAAATCGTACGTGGAAAA+AGG | - | tig0024351:64423-64442 | Msa1416470:intron | 35.0% | |
| AATTCTAATAGCAGCCTCAA+AGG | + | tig0024351:64658-64677 | None:intergenic | 35.0% | |
| !!! | ATCTCTCCATGTCACTTTTT+AGG | + | tig0024351:64722-64741 | None:intergenic | 35.0% |
| TTCCAAGAGTTTCAAACCTA+GGG | + | tig0024351:64783-64802 | None:intergenic | 35.0% | |
| ATTCCAAGAGTTTCAAACCT+AGG | + | tig0024351:64784-64803 | None:intergenic | 35.0% | |
| AGTGTTAGAAATGTTGCAAG+CGG | - | tig0024351:64852-64871 | Msa1416470:intron | 35.0% | |
| ! | AACAACATATTGATGACAGG+TGG | - | tig0024351:64998-65017 | Msa1416470:exon | 35.0% |
| ! | ACAACATATTGATGACAGGT+GGG | - | tig0024351:64999-65018 | Msa1416470:exon | 35.0% |
| !! | GAGAAGCATTACCTGAAATA+TGG | - | tig0024351:65078-65097 | Msa1416470:intron | 35.0% |
| !! | GAGATTGGATCATTTGTTGT+TGG | + | tig0024351:65121-65140 | None:intergenic | 35.0% |
| ATCGAAGCAAAACTTATGCA+TGG | + | tig0024351:65163-65182 | None:intergenic | 35.0% | |
| ! | TAATTTTGTAATGGCCTCCA+TGG | - | tig0024351:65258-65277 | Msa1416470:intron | 35.0% |
| TTGCAATTGGCATCACAAAA+TGG | - | tig0024351:65307-65326 | Msa1416470:intron | 35.0% | |
| ! | AACACCATAGTTTAAGGTCC+AGG | - | tig0024351:63247-63266 | Msa1416470:three_prime_UTR | 40.0% |
| GACCTTAATGAAAGGTGGAA+TGG | + | tig0024351:63303-63322 | None:intergenic | 40.0% | |
| ATGGATACTCAAAGGATTGC+TGG | - | tig0024351:63734-63753 | Msa1416470:intron | 40.0% | |
| AACAACTATGGCAGGAATGA+AGG | - | tig0024351:64165-64184 | Msa1416470:CDS | 40.0% | |
| ! | GGAATGAAGGTATGCAGATT+TGG | - | tig0024351:64178-64197 | Msa1416470:CDS | 40.0% |
| CATTGTCAAATTCGTAGCCA+AGG | + | tig0024351:64310-64329 | None:intergenic | 40.0% | |
| GAGTTTCATGCTTATGTGCA+TGG | - | tig0024351:64332-64351 | Msa1416470:CDS | 40.0% | |
| ! | TCTGGCTTCAGTTTCTCATA+TGG | + | tig0024351:64365-64384 | None:intergenic | 40.0% |
| TGAAGCCAGATTTCGTGTTA+AGG | - | tig0024351:64375-64394 | Msa1416470:CDS | 40.0% | |
| AGGTTCCTTAACACGAAATC+TGG | + | tig0024351:64383-64402 | None:intergenic | 40.0% | |
| !! | TTCGTTGGTAGGAGTTGATA+GGG | + | tig0024351:64611-64630 | None:intergenic | 40.0% |
| ! | ATTCGTTGGTAGGAGTTGAT+AGG | + | tig0024351:64612-64631 | None:intergenic | 40.0% |
| TCCAAGAGTTTCAAACCTAG+GGG | + | tig0024351:64782-64801 | None:intergenic | 40.0% | |
| TATGAATGCTGTTCAGAGCA+TGG | + | tig0024351:65052-65071 | None:intergenic | 40.0% | |
| AGCATTACCTGAAATATGGG+AGG | - | tig0024351:65082-65101 | Msa1416470:intron | 40.0% | |
| TCTTCAACCTCCCATATTTC+AGG | + | tig0024351:65092-65111 | None:intergenic | 40.0% | |
| AGATAGACAAAACTCTGCTG+AGG | + | tig0024351:65228-65247 | None:intergenic | 40.0% | |
| ACTCACCCAGTAATTTCGTT+CGG | + | tig0024351:65384-65403 | None:intergenic | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | tig0024351:65416-65435 | Msa1416470:intron | 40.0% |
| AGTCTACCTTGCACAAACTA+GGG | + | tig0024351:65447-65466 | None:intergenic | 40.0% | |
| TAGTCTACCTTGCACAAACT+AGG | + | tig0024351:65448-65467 | None:intergenic | 40.0% | |
| ! | AACACCATAGTTTAAGGTCC+AGG | - | tig0024351:63247-63266 | Msa1416470:three_prime_UTR | 40.0% |
| GACCTTAATGAAAGGTGGAA+TGG | + | tig0024351:63303-63322 | None:intergenic | 40.0% | |
| ATGGATACTCAAAGGATTGC+TGG | - | tig0024351:63734-63753 | Msa1416470:intron | 40.0% | |
| AACAACTATGGCAGGAATGA+AGG | - | tig0024351:64165-64184 | Msa1416470:CDS | 40.0% | |
| ! | GGAATGAAGGTATGCAGATT+TGG | - | tig0024351:64178-64197 | Msa1416470:CDS | 40.0% |
| CATTGTCAAATTCGTAGCCA+AGG | + | tig0024351:64310-64329 | None:intergenic | 40.0% | |
| GAGTTTCATGCTTATGTGCA+TGG | - | tig0024351:64332-64351 | Msa1416470:CDS | 40.0% | |
| ! | TCTGGCTTCAGTTTCTCATA+TGG | + | tig0024351:64365-64384 | None:intergenic | 40.0% |
| TGAAGCCAGATTTCGTGTTA+AGG | - | tig0024351:64375-64394 | Msa1416470:CDS | 40.0% | |
| AGGTTCCTTAACACGAAATC+TGG | + | tig0024351:64383-64402 | None:intergenic | 40.0% | |
| !! | TTCGTTGGTAGGAGTTGATA+GGG | + | tig0024351:64611-64630 | None:intergenic | 40.0% |
| ! | ATTCGTTGGTAGGAGTTGAT+AGG | + | tig0024351:64612-64631 | None:intergenic | 40.0% |
| TCCAAGAGTTTCAAACCTAG+GGG | + | tig0024351:64782-64801 | None:intergenic | 40.0% | |
| TATGAATGCTGTTCAGAGCA+TGG | + | tig0024351:65052-65071 | None:intergenic | 40.0% | |
| AGCATTACCTGAAATATGGG+AGG | - | tig0024351:65082-65101 | Msa1416470:intron | 40.0% | |
| TCTTCAACCTCCCATATTTC+AGG | + | tig0024351:65092-65111 | None:intergenic | 40.0% | |
| AGATAGACAAAACTCTGCTG+AGG | + | tig0024351:65228-65247 | None:intergenic | 40.0% | |
| ACTCACCCAGTAATTTCGTT+CGG | + | tig0024351:65384-65403 | None:intergenic | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | tig0024351:65416-65435 | Msa1416470:intron | 40.0% |
| AGTCTACCTTGCACAAACTA+GGG | + | tig0024351:65447-65466 | None:intergenic | 40.0% | |
| TAGTCTACCTTGCACAAACT+AGG | + | tig0024351:65448-65467 | None:intergenic | 40.0% | |
| ACTCTCTACCCATTGAGCTT+AGG | - | tig0024351:63918-63937 | Msa1416470:intron | 45.0% | |
| CTCTCTACCCATTGAGCTTA+GGG | - | tig0024351:63919-63938 | Msa1416470:intron | 45.0% | |
| GCATGTCGCAAGAACATACA+AGG | - | tig0024351:63951-63970 | Msa1416470:intron | 45.0% | |
| GAACATGGAACAACTATGGC+AGG | - | tig0024351:64157-64176 | Msa1416470:CDS | 45.0% | |
| TTAATTTCCTGTCAGGCCCT+TGG | - | tig0024351:64290-64309 | Msa1416470:intron | 45.0% | |
| ! | TACGATTTTACGCTGAGGCA+TGG | + | tig0024351:64414-64433 | None:intergenic | 45.0% |
| ! | TGGCTTGGAAGATTGCTTTG+AGG | - | tig0024351:64560-64579 | Msa1416470:CDS | 45.0% |
| GGCTTGGAAGATTGCTTTGA+GGG | - | tig0024351:64561-64580 | Msa1416470:CDS | 45.0% | |
| TTTGCAGAGGATTCGTTGGT+AGG | + | tig0024351:64622-64641 | None:intergenic | 45.0% | |
| ! | ATGGTTTGCAGAGGATTCGT+TGG | + | tig0024351:64626-64645 | None:intergenic | 45.0% |
| AATCCTCTGCAAACCATCTG+TGG | - | tig0024351:64629-64648 | Msa1416470:CDS | 45.0% | |
| ! | ACCCCTAGGTTTGAAACTCT+TGG | - | tig0024351:64778-64797 | Msa1416470:CDS | 45.0% |
| CAAAACTTATGCATGGACCG+TGG | + | tig0024351:65156-65175 | None:intergenic | 45.0% | |
| ATTTAAGCACCACCATGCCA+TGG | + | tig0024351:65278-65297 | None:intergenic | 45.0% | |
| ACGTCTTAAAGAAAGCGACC+TGG | + | tig0024351:65412-65431 | None:intergenic | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | tig0024351:65486-65505 | None:intergenic | 45.0% |
| ACTCTCTACCCATTGAGCTT+AGG | - | tig0024351:63918-63937 | Msa1416470:intron | 45.0% | |
| CTCTCTACCCATTGAGCTTA+GGG | - | tig0024351:63919-63938 | Msa1416470:intron | 45.0% | |
| GCATGTCGCAAGAACATACA+AGG | - | tig0024351:63951-63970 | Msa1416470:intron | 45.0% | |
| GAACATGGAACAACTATGGC+AGG | - | tig0024351:64157-64176 | Msa1416470:CDS | 45.0% | |
| TTAATTTCCTGTCAGGCCCT+TGG | - | tig0024351:64290-64309 | Msa1416470:intron | 45.0% | |
| ! | TACGATTTTACGCTGAGGCA+TGG | + | tig0024351:64414-64433 | None:intergenic | 45.0% |
| ! | TGGCTTGGAAGATTGCTTTG+AGG | - | tig0024351:64560-64579 | Msa1416470:CDS | 45.0% |
| GGCTTGGAAGATTGCTTTGA+GGG | - | tig0024351:64561-64580 | Msa1416470:CDS | 45.0% | |
| TTTGCAGAGGATTCGTTGGT+AGG | + | tig0024351:64622-64641 | None:intergenic | 45.0% | |
| ! | ATGGTTTGCAGAGGATTCGT+TGG | + | tig0024351:64626-64645 | None:intergenic | 45.0% |
| AATCCTCTGCAAACCATCTG+TGG | - | tig0024351:64629-64648 | Msa1416470:CDS | 45.0% | |
| ! | ACCCCTAGGTTTGAAACTCT+TGG | - | tig0024351:64778-64797 | Msa1416470:CDS | 45.0% |
| CAAAACTTATGCATGGACCG+TGG | + | tig0024351:65156-65175 | None:intergenic | 45.0% | |
| ATTTAAGCACCACCATGCCA+TGG | + | tig0024351:65278-65297 | None:intergenic | 45.0% | |
| ACGTCTTAAAGAAAGCGACC+TGG | + | tig0024351:65412-65431 | None:intergenic | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | tig0024351:65486-65505 | None:intergenic | 45.0% |
| ! | CCACGTACGATTTTACGCTG+AGG | + | tig0024351:64419-64438 | None:intergenic | 50.0% |
| CCTCAGCGTAAAATCGTACG+TGG | - | tig0024351:64416-64435 | Msa1416470:CDS | 50.0% | |
| ATGCGGTTGAAGTTCTCAGC+AGG | - | tig0024351:64535-64554 | Msa1416470:intron | 50.0% | |
| GTTGAAGTTCTCAGCAGGCT+TGG | - | tig0024351:64540-64559 | Msa1416470:intron | 50.0% | |
| ! | CTTCCACAGATGGTTTGCAG+AGG | + | tig0024351:64635-64654 | None:intergenic | 50.0% |
| ACCATCTGTGGAAGCCTTTG+AGG | - | tig0024351:64641-64660 | Msa1416470:intron | 50.0% | |
| GTTGCAAGCGGAAAAGTAGC+TGG | - | tig0024351:64864-64883 | Msa1416470:intron | 50.0% | |
| ! | TTGATGACAGGTGGGTCGAT+CGG | - | tig0024351:65007-65026 | Msa1416470:exon | 50.0% |
| TGGCTTCGACTGCAAGAGAT+TGG | + | tig0024351:65136-65155 | None:intergenic | 50.0% | |
| ATCTCTTGCAGTCGAAGCCA+CGG | - | tig0024351:65136-65155 | Msa1416470:intron | 50.0% | |
| TTGTAATGGCCTCCATGGCA+TGG | - | tig0024351:65263-65282 | Msa1416470:intron | 50.0% | |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | tig0024351:65438-65457 | Msa1416470:intron | 50.0% |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | tig0024351:65480-65499 | None:intergenic | 50.0% |
| ! | CCACGTACGATTTTACGCTG+AGG | + | tig0024351:64419-64438 | None:intergenic | 50.0% |
| CCTCAGCGTAAAATCGTACG+TGG | - | tig0024351:64416-64435 | Msa1416470:CDS | 50.0% | |
| ATGCGGTTGAAGTTCTCAGC+AGG | - | tig0024351:64535-64554 | Msa1416470:intron | 50.0% | |
| GTTGAAGTTCTCAGCAGGCT+TGG | - | tig0024351:64540-64559 | Msa1416470:intron | 50.0% | |
| ! | CTTCCACAGATGGTTTGCAG+AGG | + | tig0024351:64635-64654 | None:intergenic | 50.0% |
| ACCATCTGTGGAAGCCTTTG+AGG | - | tig0024351:64641-64660 | Msa1416470:intron | 50.0% | |
| GTTGCAAGCGGAAAAGTAGC+TGG | - | tig0024351:64864-64883 | Msa1416470:intron | 50.0% | |
| ! | TTGATGACAGGTGGGTCGAT+CGG | - | tig0024351:65007-65026 | Msa1416470:exon | 50.0% |
| TGGCTTCGACTGCAAGAGAT+TGG | + | tig0024351:65136-65155 | None:intergenic | 50.0% | |
| ATCTCTTGCAGTCGAAGCCA+CGG | - | tig0024351:65136-65155 | Msa1416470:intron | 50.0% | |
| TTGTAATGGCCTCCATGGCA+TGG | - | tig0024351:65263-65282 | Msa1416470:intron | 50.0% | |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | tig0024351:65438-65457 | Msa1416470:intron | 50.0% |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | tig0024351:65480-65499 | None:intergenic | 50.0% |
| GCTGAGGCATGGAAAGCAGA+AGG | + | tig0024351:64403-64422 | None:intergenic | 55.0% | |
| CAACGCAGATCACGCACATG+CGG | - | tig0024351:64518-64537 | Msa1416470:intron | 55.0% | |
| AGTTCTCAGCAGGCTTGGCT+TGG | - | tig0024351:64545-64564 | Msa1416470:intron | 55.0% | |
| GCCTCAAAGGCTTCCACAGA+TGG | + | tig0024351:64645-64664 | None:intergenic | 55.0% | |
| GGTCGATCGGATTTAGTGCC+TGG | - | tig0024351:65020-65039 | Msa1416470:intron | 55.0% | |
| TTCAGAGCATGGTCAGCACC+AGG | + | tig0024351:65041-65060 | None:intergenic | 55.0% | |
| TAATGGCCTCCATGGCATGG+TGG | - | tig0024351:65266-65285 | Msa1416470:intron | 55.0% | |
| TAAGCACCACCATGCCATGG+AGG | + | tig0024351:65275-65294 | None:intergenic | 55.0% | |
| TTACTGGGTGAGTCACGACC+AGG | - | tig0024351:65391-65410 | Msa1416470:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | tig0024351:65475-65494 | None:intergenic | 55.0% |
| GCTGAGGCATGGAAAGCAGA+AGG | + | tig0024351:64403-64422 | None:intergenic | 55.0% | |
| CAACGCAGATCACGCACATG+CGG | - | tig0024351:64518-64537 | Msa1416470:intron | 55.0% | |
| AGTTCTCAGCAGGCTTGGCT+TGG | - | tig0024351:64545-64564 | Msa1416470:intron | 55.0% | |
| GCCTCAAAGGCTTCCACAGA+TGG | + | tig0024351:64645-64664 | None:intergenic | 55.0% | |
| GGTCGATCGGATTTAGTGCC+TGG | - | tig0024351:65020-65039 | Msa1416470:intron | 55.0% | |
| TTCAGAGCATGGTCAGCACC+AGG | + | tig0024351:65041-65060 | None:intergenic | 55.0% | |
| TAATGGCCTCCATGGCATGG+TGG | - | tig0024351:65266-65285 | Msa1416470:intron | 55.0% | |
| TAAGCACCACCATGCCATGG+AGG | + | tig0024351:65275-65294 | None:intergenic | 55.0% | |
| TTACTGGGTGAGTCACGACC+AGG | - | tig0024351:65391-65410 | Msa1416470:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | tig0024351:65475-65494 | None:intergenic | 55.0% |
| TTCGTAGCCAAGGGCCTGAC+AGG | + | tig0024351:64300-64319 | None:intergenic | 60.0% | |
| CGCATGTGCGTGATCTGCGT+TGG | + | tig0024351:64520-64539 | None:intergenic | 60.0% | |
| CTATCAACCACGCCGTCTCC+AGG | - | tig0024351:65465-65484 | Msa1416470:intron | 60.0% | |
| TTCGTAGCCAAGGGCCTGAC+AGG | + | tig0024351:64300-64319 | None:intergenic | 60.0% | |
| CGCATGTGCGTGATCTGCGT+TGG | + | tig0024351:64520-64539 | None:intergenic | 60.0% | |
| CTATCAACCACGCCGTCTCC+AGG | - | tig0024351:65465-65484 | Msa1416470:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024351 | gene | 63230 | 65514 | 63230 | ID=Msa1416470;Name=Msa1416470 |
| tig0024351 | mRNA | 63230 | 65514 | 63230 | ID=Msa1416470-mRNA-1;Parent=Msa1416470;Name=Msa1416470-mRNA-1;_AED=0.14;_eAED=0.14;_QI=57|1|1|1|0.85|0.75|8|345|249 |
| tig0024351 | exon | 63230 | 63727 | 63230 | ID=Msa1416470-mRNA-1:exon:22962;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 63842 | 63907 | 63842 | ID=Msa1416470-mRNA-1:exon:22961;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 64043 | 64234 | 64043 | ID=Msa1416470-mRNA-1:exon:22960;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 64314 | 64439 | 64314 | ID=Msa1416470-mRNA-1:exon:22959;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 64558 | 64655 | 64558 | ID=Msa1416470-mRNA-1:exon:22958;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 64772 | 64837 | 64772 | ID=Msa1416470-mRNA-1:exon:22957;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 64962 | 65028 | 64962 | ID=Msa1416470-mRNA-1:exon:22956;Parent=Msa1416470-mRNA-1 |
| tig0024351 | exon | 65476 | 65514 | 65476 | ID=Msa1416470-mRNA-1:exon:22955;Parent=Msa1416470-mRNA-1 |
| tig0024351 | five_prime_UTR | 65476 | 65514 | 65476 | ID=Msa1416470-mRNA-1:five_prime_utr;Parent=Msa1416470-mRNA-1 |
| tig0024351 | five_prime_UTR | 65011 | 65028 | 65011 | ID=Msa1416470-mRNA-1:five_prime_utr;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 64962 | 65010 | 64962 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 64772 | 64837 | 64772 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 64558 | 64655 | 64558 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 64314 | 64439 | 64314 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 64043 | 64234 | 64043 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 63842 | 63907 | 63842 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | CDS | 63575 | 63727 | 63575 | ID=Msa1416470-mRNA-1:cds;Parent=Msa1416470-mRNA-1 |
| tig0024351 | three_prime_UTR | 63230 | 63574 | 63230 | ID=Msa1416470-mRNA-1:three_prime_utr;Parent=Msa1416470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
