AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0465970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465970 MtrunA17_Chr3g0118681 90.588 255 23 1 336 589 1 255 3.93e-161 460
Msa0465970 MtrunA17_Chr3g0102281 35.377 212 97 9 19 211 849 1039 6.51e-22 100
Msa0465970 MtrunA17_Chr3g0102271 35.211 213 100 11 19 222 850 1033 3.25e-19 92.0
Msa0465970 MtrunA17_Chr3g0102261 31.863 204 98 9 19 205 851 1030 3.94e-19 92.0
Msa0465970 MtrunA17_Chr3g0102121 33.166 199 96 9 19 202 850 1026 7.27e-19 91.3
Msa0465970 MtrunA17_Chr3g0102171 31.418 261 120 13 19 247 849 1082 2.06e-18 89.7
Msa0465970 MtrunA17_Chr4g0018431 33.333 204 101 10 19 205 858 1043 7.17e-17 84.7
Msa0465970 MtrunA17_Chr8g0342791 28.279 244 161 5 352 587 1230 1467 1.76e-14 77.4
Msa0465970 MtrunA17_Chr5g0439961 29.461 241 157 4 357 589 70 305 1.01e-13 72.4
Msa0465970 MtrunA17_Chr3g0102151 31.847 157 78 8 64 213 189 323 2.32e-13 72.0
Msa0465970 MtrunA17_Chr8g0342751 26.506 249 167 5 348 587 135 376 4.96e-13 71.2
Msa0465970 MtrunA17_Chr3g0119001 28.037 214 102 7 19 205 851 1039 3.51e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 115 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCAACTTTCTTCTTAT+TGG 0.040976 3_3:+66475183 None:intergenic
CCCCTATGTCTTTGGAATTT+TGG 0.093982 3_3:+66476872 None:intergenic
GAGATATTTCAGAAATAATT+TGG 0.131185 3_3:+66475428 None:intergenic
ATTCTTCTCATCATAGTTAT+TGG 0.135204 3_3:+66476612 None:intergenic
AAACTTTCTAGTTCGGAAAT+TGG 0.188771 3_3:+66475814 None:intergenic
ATAGCATGATGAAGCTTAAT+AGG 0.194421 3_3:+66475589 None:intergenic
CTTCCAGAATCTGGTTTATA+CGG 0.251338 3_3:-66476961 Msa0465970:CDS
GTCACTTATATCAAAGAAAT+TGG 0.251927 3_3:-66475473 Msa0465970:CDS
TGAAAATTTAGAAACCCTTT+TGG 0.272716 3_3:-66475704 Msa0465970:CDS
TTAGGGATCATGTGTTTCTT+TGG 0.288974 3_3:-66476816 Msa0465970:CDS
TGGGTAATTTACATTTGGTT+AGG 0.308253 3_3:-66476834 Msa0465970:CDS
CTCTTTGGGTAATTTACATT+TGG 0.312348 3_3:-66476839 Msa0465970:CDS
GTTGGGAATCTTCCAGAATC+TGG 0.317794 3_3:-66476970 Msa0465970:CDS
AACTTTCTTCTTATTGGATA+AGG 0.321389 3_3:+66475189 None:intergenic
GATGAAGCTTAATAGGGATT+TGG 0.323065 3_3:+66475596 None:intergenic
TCTTCGTCTCACATCTTTGT+AGG 0.342298 3_3:-66476469 Msa0465970:intron
CTTGATGCAATTTCTTAGTC+TGG 0.342860 3_3:+66476542 None:intergenic
TCAAGAATAGCTGCAACATT+TGG 0.348618 3_3:+66475724 None:intergenic
TGAATGGGTTGATCTTAAAA+AGG 0.349990 3_3:-66475161 Msa0465970:CDS
GAGTTGCAAGTCACAGAAAT+TGG 0.350910 3_3:-66476589 Msa0465970:CDS
AGAAATAATTTGGGATTCTC+TGG 0.351183 3_3:+66475438 None:intergenic
AATTTGGGATTCTCTGGCTT+TGG 0.351977 3_3:+66475444 None:intergenic
TCCTCTTCCTCGAAACTTTG+TGG 0.352592 3_3:+66476285 None:intergenic
AAACCGTATAAACCAGATTC+TGG 0.353356 3_3:+66476958 None:intergenic
CGTGCAACCATTTGTATTTG+TGG 0.361028 3_3:+66476314 None:intergenic
CTTTGGTATCTTGACATTAG+AGG 0.364402 3_3:-66476799 Msa0465970:CDS
TTTAAGACAGTCTTACATTC+AGG 0.365125 3_3:+66475247 None:intergenic
TAGCTGCAACATTTGGATCT+TGG 0.376069 3_3:+66475731 None:intergenic
TGGTCAACAGAGAGGATAAT+AGG 0.376338 3_3:-66476670 Msa0465970:CDS
CTGACACCACTTCAATAGTC+TGG 0.389948 3_3:+66475935 None:intergenic
CGCTTAGGAACTTGAGATCC+AGG 0.397868 3_3:+66477048 None:intergenic
AGATATTTCAGAAATAATTT+GGG 0.403733 3_3:+66475429 None:intergenic
AGAAGAAAGTTGAAGATGAA+TGG 0.405088 3_3:-66475177 Msa0465970:CDS
AATTGAAAGGACATGTTGTA+AGG 0.406787 3_3:+66476718 None:intergenic
CGCACCTTGAATCAGACTCT+TGG 0.410192 3_3:-66475840 Msa0465970:CDS
ATGTAACAAACTTTCTAGTT+CGG 0.410472 3_3:+66475807 None:intergenic
TCAAATTCACAATGAACATC+TGG 0.415665 3_3:-66475062 Msa0465970:three_prime_UTR
GTTGTGCAACCTCTGTCTTA+AGG 0.418073 3_3:+66475278 None:intergenic
GGGTAATTTACATTTGGTTA+GGG 0.419517 3_3:-66476833 Msa0465970:CDS
CAACATCACTTGCTCATTGT+TGG 0.429003 3_3:+66475897 None:intergenic
TTTCAAGTGGTGTCTCCAAA+AGG 0.431609 3_3:+66475689 None:intergenic
AAGAACACAGACTGAGGATA+TGG 0.438714 3_3:+66477072 None:intergenic
AGACTGTCTTAAAGAATTTG+AGG 0.444655 3_3:-66475237 Msa0465970:CDS
CCTCAGTCTGTGTTCTTCCC+TGG 0.447143 3_3:-66477066 Msa0465970:CDS
TAGCATGATGAAGCTTAATA+GGG 0.448115 3_3:+66475590 None:intergenic
GAAGAAAGTTGAAGATGAAT+GGG 0.452327 3_3:-66475176 Msa0465970:CDS
ACCAAAATTCCAAAGACATA+GGG 0.466009 3_3:-66476873 Msa0465970:CDS
TTCAAGTGGTGTCTCCAAAA+GGG 0.466203 3_3:+66475690 None:intergenic
ACCACAAAGTTTCGAGGAAG+AGG 0.473132 3_3:-66476286 Msa0465970:CDS
CAACTTCTGCAGTAACAGTT+GGG 0.478176 3_3:-66476987 Msa0465970:CDS
GAATAATAGTGATGGATAGT+TGG 0.480333 3_3:-66474934 Msa0465970:three_prime_UTR
GCACCTTGAATCAGACTCTT+GGG 0.482241 3_3:-66475839 Msa0465970:CDS
ATGGATAGTTGGAACACTAT+AGG 0.485771 3_3:-66474923 Msa0465970:three_prime_UTR
CCATCACTATTATTCTCCTC+TGG 0.488583 3_3:+66474942 None:intergenic
CCATTTGTATTTGTGGCTGT+TGG 0.491250 3_3:+66476321 None:intergenic
GCTTCACACATCTCTTTGCA+TGG 0.494158 3_3:-66476772 Msa0465970:CDS
AAGTTAAGAACTTTCATTGA+AGG 0.500069 3_3:-66475562 Msa0465970:CDS
GCTTAGAGACAAGGTGAAGA+GGG 0.500547 3_3:-66475332 Msa0465970:CDS
GAACGAAAACTAAATCGCTT+AGG 0.503757 3_3:+66477033 None:intergenic
TGTTACTGACCTTACTACAT+TGG 0.505042 3_3:-66477127 Msa0465970:CDS
AGGTTTCGATCTATGTTCAA+AGG 0.505111 3_3:+66477098 None:intergenic
CAGAGAGGATAATAGGTTGT+GGG 0.506101 3_3:-66476663 Msa0465970:CDS
TCAACTTCTGCAGTAACAGT+TGG 0.509851 3_3:-66476988 Msa0465970:CDS
GACTGTCTTAAAGAATTTGA+GGG 0.512530 3_3:-66475236 Msa0465970:CDS
AGTCTGGTTTGAGTCCTTGT+TGG 0.513474 3_3:+66475951 None:intergenic
GATTCTTCTAAGTGATAAAG+TGG 0.515425 3_3:+66476634 None:intergenic
GTCGATTCCATCGATGCAAA+AGG 0.517923 3_3:-66475015 Msa0465970:three_prime_UTR
GAGTTAGAGCAAAAGTTAAG+TGG 0.519212 3_3:-66475364 Msa0465970:CDS
AGTTAAGAACTTTCATTGAA+GGG 0.520236 3_3:-66475561 Msa0465970:CDS
ATGACCAACTGCTTCAATCA+AGG 0.521862 3_3:-66475495 Msa0465970:CDS
GACCAAAATTCCAAAGACAT+AGG 0.522607 3_3:-66476874 Msa0465970:CDS
AGACAAGGTGAAGAGGGAGT+TGG 0.525083 3_3:-66475326 Msa0465970:CDS
TTGAAAACGAGGAGGGAGAA+TGG 0.526247 3_3:-66476690 Msa0465970:CDS
GGTTTCGATCTATGTTCAAA+GGG 0.526373 3_3:+66477099 None:intergenic
AGGGTATGTCCAATGTAGTA+AGG 0.526392 3_3:+66477118 None:intergenic
TAGCAAAGAAACATATATGA+TGG 0.527072 3_3:-66474970 Msa0465970:three_prime_UTR
CCAACAGCCACAAATACAAA+TGG 0.527605 3_3:-66476321 Msa0465970:CDS
CATTTGATTTAGAAAGAACC+AGG 0.527864 3_3:+66476926 None:intergenic
AGCTTAGAGACAAGGTGAAG+AGG 0.531645 3_3:-66475333 Msa0465970:CDS
ACAGAGAGGATAATAGGTTG+TGG 0.532392 3_3:-66476664 Msa0465970:CDS
AGACAGAGGTTGCACAACAT+TGG 0.540693 3_3:-66475273 Msa0465970:CDS
GAGAAAACCACAAAGTTTCG+AGG 0.541460 3_3:-66476292 Msa0465970:CDS
CCAAAATTCCAAAGACATAG+GGG 0.543509 3_3:-66476872 Msa0465970:CDS
GTTAAGAACTTTCATTGAAG+GGG 0.548370 3_3:-66475560 Msa0465970:CDS
ACAGACTGAGGATATGGTTG+AGG 0.554525 3_3:+66477078 None:intergenic
GATCCCAAGAGTCTGATTCA+AGG 0.562385 3_3:+66475836 None:intergenic
CAACAATGAGCAAGTGATGT+TGG 0.576162 3_3:-66475896 Msa0465970:CDS
CAAATGTAAATTACCCAAAG+AGG 0.578852 3_3:+66476840 None:intergenic
CCAGAGGAGAATAATAGTGA+TGG 0.581210 3_3:-66474942 Msa0465970:three_prime_UTR
TACAAAATACATTCATACGT+TGG 0.588811 3_3:-66474887 Msa0465970:three_prime_UTR
GTTCTGAAGAAAATTATCAT+CGG 0.595167 3_3:-66477014 Msa0465970:CDS
GTGACCTTGATTGAAGCAGT+TGG 0.600403 3_3:+66475491 None:intergenic
ATCTTATCATATAAATGAAG+AGG 0.608747 3_3:-66476566 Msa0465970:CDS
ATTATTTCTGAAATATCTCG+AGG 0.613950 3_3:-66475424 Msa0465970:CDS
CTCAAACCAGACTATTGAAG+TGG 0.617434 3_3:-66475941 Msa0465970:CDS
CAAGAGTCTGATTCAAGGTG+CGG 0.618203 3_3:+66475841 None:intergenic
TCTGAAGAGATAATTTCAAG+TGG 0.620346 3_3:+66475676 None:intergenic
CTAAACAATCGCAGTGACGG+TGG 0.622593 3_3:+66477171 None:intergenic
GCACTAAACAATCGCAGTGA+CGG 0.632920 3_3:+66477168 None:intergenic
TCTTGTTAAGCTTAGAGACA+AGG 0.633307 3_3:-66475341 Msa0465970:CDS
ATTGTTGAGTCAGCGCACAT+AGG 0.636287 3_3:+66475766 None:intergenic
TGAAATTATCTCTTCAGACA+AGG 0.637650 3_3:-66475671 Msa0465970:CDS
CACTGTAATAGCTTCCAACA+AGG 0.638332 3_3:-66475965 Msa0465970:CDS
AGGGAGAATGGTCAACAGAG+AGG 0.643123 3_3:-66476678 Msa0465970:CDS
GCAGTGACGGTGGAAGCTGA+AGG 0.644773 3_3:+66477181 None:intergenic
GCTTAGGAACTTGAGATCCA+GGG 0.647588 3_3:+66477049 None:intergenic
AGAGAGGATAATAGGTTGTG+GGG 0.647987 3_3:-66476662 Msa0465970:CDS
CCAGGGAAGAACACAGACTG+AGG 0.657885 3_3:+66477066 None:intergenic
GGAGAAAGACACTACCTCTG+TGG 0.674922 3_3:-66474994 Msa0465970:three_prime_UTR
AAATAGAAACCTTAAGACAG+AGG 0.675361 3_3:-66475287 Msa0465970:CDS
ATATATGATGGTATTACCAG+AGG 0.683407 3_3:-66474958 Msa0465970:three_prime_UTR
CAAAATTCCAAAGACATAGG+GGG 0.687986 3_3:-66476871 Msa0465970:CDS
AAATCAAATGACAAGTACAG+AGG 0.693240 3_3:-66476913 Msa0465970:CDS
TGTTTCTTTGCTATCCACAG+AGG 0.699848 3_3:+66474980 None:intergenic
TTGTGAATTTGAATCCACAG+AGG 0.723417 3_3:+66475073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGATATATCAAATTTTAT+TGG + chr3_3:66476956-66476975 None:intergenic 10.0%
!!! ATTGATATATCAAATTTTAT+TGG + chr3_3:66476956-66476975 None:intergenic 10.0%
!! AGATATTTCAGAAATAATTT+GGG + chr3_3:66476656-66476675 None:intergenic 15.0%
!! AGATATTTCAGAAATAATTT+GGG + chr3_3:66476656-66476675 None:intergenic 15.0%
!! ATCTTATCATATAAATGAAG+AGG - chr3_3:66475516-66475535 Msa0465970:CDS 20.0%
!! AAGTTCTGTCAAAAAATTAA+AGG - chr3_3:66475829-66475848 Msa0465970:CDS 20.0%
!! GATATAAAATTTCAATCAAG+TGG + chr3_3:66476014-66476033 None:intergenic 20.0%
!! TTACATATCCTATAATTAGA+GGG + chr3_3:66476053-66476072 None:intergenic 20.0%
!! ATTACATATCCTATAATTAG+AGG + chr3_3:66476054-66476073 None:intergenic 20.0%
!! GATATGTAATAAAATTTCCT+TGG - chr3_3:66476064-66476083 Msa0465970:intron 20.0%
!!! GAAAAAGTTCCATAAAATTT+TGG - chr3_3:66476441-66476460 Msa0465970:intron 20.0%
!! GAGATATTTCAGAAATAATT+TGG + chr3_3:66476657-66476676 None:intergenic 20.0%
!!! GATATATCAAATTTTATTGG+CGG + chr3_3:66476953-66476972 None:intergenic 20.0%
!! ATCTTATCATATAAATGAAG+AGG - chr3_3:66475516-66475535 Msa0465970:CDS 20.0%
!! AAGTTCTGTCAAAAAATTAA+AGG - chr3_3:66475829-66475848 Msa0465970:CDS 20.0%
!! GATATAAAATTTCAATCAAG+TGG + chr3_3:66476014-66476033 None:intergenic 20.0%
!! TTACATATCCTATAATTAGA+GGG + chr3_3:66476053-66476072 None:intergenic 20.0%
!! ATTACATATCCTATAATTAG+AGG + chr3_3:66476054-66476073 None:intergenic 20.0%
!! GATATGTAATAAAATTTCCT+TGG - chr3_3:66476064-66476083 Msa0465970:intron 20.0%
!!! GAAAAAGTTCCATAAAATTT+TGG - chr3_3:66476441-66476460 Msa0465970:intron 20.0%
!! GAGATATTTCAGAAATAATT+TGG + chr3_3:66476657-66476676 None:intergenic 20.0%
!!! GATATATCAAATTTTATTGG+CGG + chr3_3:66476953-66476972 None:intergenic 20.0%
!!! GTTCTGAAGAAAATTATCAT+CGG - chr3_3:66475068-66475087 Msa0465970:three_prime_UTR 25.0%
!!! GTTTTCAAGTGAAAATTGAA+AGG + chr3_3:66475380-66475399 None:intergenic 25.0%
! ATTCTTCTCATCATAGTTAT+TGG + chr3_3:66475473-66475492 None:intergenic 25.0%
! TTGCATTAAAGATGAAAAAC+TGG - chr3_3:66475576-66475595 Msa0465970:CDS 25.0%
!!! TTTTTTCTAGAGCAATCAAA+AGG - chr3_3:66475686-66475705 Msa0465970:CDS 25.0%
! ATTTAGATGAAAATGAGGAA+TGG + chr3_3:66475914-66475933 None:intergenic 25.0%
! ATGCAATTTAGATGAAAATG+AGG + chr3_3:66475919-66475938 None:intergenic 25.0%
! AAAAGATTCAATAAAGACCA+AGG + chr3_3:66476084-66476103 None:intergenic 25.0%
!!! ATGTAACAAACTTTCTAGTT+CGG + chr3_3:66476278-66476297 None:intergenic 25.0%
!! TGAAAATTTAGAAACCCTTT+TGG - chr3_3:66476378-66476397 Msa0465970:intron 25.0%
!! CAAGTTGTTCCAAAATTTTA+TGG + chr3_3:66476453-66476472 None:intergenic 25.0%
!!! CATAAAATTTTGGAACAACT+TGG - chr3_3:66476451-66476470 Msa0465970:intron 25.0%
! AAGTTAAGAACTTTCATTGA+AGG - chr3_3:66476520-66476539 Msa0465970:CDS 25.0%
! AGTTAAGAACTTTCATTGAA+GGG - chr3_3:66476521-66476540 Msa0465970:CDS 25.0%
! GTCACTTATATCAAAGAAAT+TGG - chr3_3:66476609-66476628 Msa0465970:CDS 25.0%
!!! ATTATTTCTGAAATATCTCG+AGG - chr3_3:66476658-66476677 Msa0465970:CDS 25.0%
! AACTTTCTTCTTATTGGATA+AGG + chr3_3:66476896-66476915 None:intergenic 25.0%
! ATCTTCAACTTTCTTCTTAT+TGG + chr3_3:66476902-66476921 None:intergenic 25.0%
! TAGCAAAGAAACATATATGA+TGG - chr3_3:66477112-66477131 Msa0465970:CDS 25.0%
! TACAAAATACATTCATACGT+TGG - chr3_3:66477195-66477214 Msa0465970:CDS 25.0%
!!! TTGCGTTTTGAAAAATTCTT+CGG + chr3_3:66474853-66474872 None:intergenic 25.0%
!!! GTTCTGAAGAAAATTATCAT+CGG - chr3_3:66475068-66475087 Msa0465970:three_prime_UTR 25.0%
!!! GTTTTCAAGTGAAAATTGAA+AGG + chr3_3:66475380-66475399 None:intergenic 25.0%
! ATTCTTCTCATCATAGTTAT+TGG + chr3_3:66475473-66475492 None:intergenic 25.0%
! TTGCATTAAAGATGAAAAAC+TGG - chr3_3:66475576-66475595 Msa0465970:CDS 25.0%
!!! TTTTTTCTAGAGCAATCAAA+AGG - chr3_3:66475686-66475705 Msa0465970:CDS 25.0%
! ATTTAGATGAAAATGAGGAA+TGG + chr3_3:66475914-66475933 None:intergenic 25.0%
! ATGCAATTTAGATGAAAATG+AGG + chr3_3:66475919-66475938 None:intergenic 25.0%
! AAAAGATTCAATAAAGACCA+AGG + chr3_3:66476084-66476103 None:intergenic 25.0%
!!! ATGTAACAAACTTTCTAGTT+CGG + chr3_3:66476278-66476297 None:intergenic 25.0%
!! TGAAAATTTAGAAACCCTTT+TGG - chr3_3:66476378-66476397 Msa0465970:intron 25.0%
!! CAAGTTGTTCCAAAATTTTA+TGG + chr3_3:66476453-66476472 None:intergenic 25.0%
!!! CATAAAATTTTGGAACAACT+TGG - chr3_3:66476451-66476470 Msa0465970:intron 25.0%
! AAGTTAAGAACTTTCATTGA+AGG - chr3_3:66476520-66476539 Msa0465970:CDS 25.0%
! AGTTAAGAACTTTCATTGAA+GGG - chr3_3:66476521-66476540 Msa0465970:CDS 25.0%
! GTCACTTATATCAAAGAAAT+TGG - chr3_3:66476609-66476628 Msa0465970:CDS 25.0%
!!! ATTATTTCTGAAATATCTCG+AGG - chr3_3:66476658-66476677 Msa0465970:CDS 25.0%
! AACTTTCTTCTTATTGGATA+AGG + chr3_3:66476896-66476915 None:intergenic 25.0%
! ATCTTCAACTTTCTTCTTAT+TGG + chr3_3:66476902-66476921 None:intergenic 25.0%
! TAGCAAAGAAACATATATGA+TGG - chr3_3:66477112-66477131 Msa0465970:CDS 25.0%
! TACAAAATACATTCATACGT+TGG - chr3_3:66477195-66477214 Msa0465970:CDS 25.0%
! CATTTGATTTAGAAAGAACC+AGG + chr3_3:66475159-66475178 None:intergenic 30.0%
AAATCAAATGACAAGTACAG+AGG - chr3_3:66475169-66475188 Msa0465970:CDS 30.0%
ACCAAAATTCCAAAGACATA+GGG - chr3_3:66475209-66475228 Msa0465970:CDS 30.0%
CAAATGTAAATTACCCAAAG+AGG + chr3_3:66475245-66475264 None:intergenic 30.0%
CTCTTTGGGTAATTTACATT+TGG - chr3_3:66475243-66475262 Msa0465970:CDS 30.0%
TGGGTAATTTACATTTGGTT+AGG - chr3_3:66475248-66475267 Msa0465970:CDS 30.0%
GGGTAATTTACATTTGGTTA+GGG - chr3_3:66475249-66475268 Msa0465970:CDS 30.0%
AATTGAAAGGACATGTTGTA+AGG + chr3_3:66475367-66475386 None:intergenic 30.0%
! TCAATTTTCACTTGAAAACG+AGG - chr3_3:66475381-66475400 Msa0465970:CDS 30.0%
GATTCTTCTAAGTGATAAAG+TGG + chr3_3:66475451-66475470 None:intergenic 30.0%
! TTTCAATCAAGTGGTCATTT+TGG + chr3_3:66476005-66476024 None:intergenic 30.0%
ATATCCTATAATTAGAGGGA+GGG + chr3_3:66476049-66476068 None:intergenic 30.0%
!! AAACTTTCTAGTTCGGAAAT+TGG + chr3_3:66476271-66476290 None:intergenic 30.0%
TCTGAAGAGATAATTTCAAG+TGG + chr3_3:66476409-66476428 None:intergenic 30.0%
TGAAATTATCTCTTCAGACA+AGG - chr3_3:66476411-66476430 Msa0465970:intron 30.0%
!!! TAGGGATTTGGTTTTCAAAT+TGG + chr3_3:66476477-66476496 None:intergenic 30.0%
TAGCATGATGAAGCTTAATA+GGG + chr3_3:66476495-66476514 None:intergenic 30.0%
ATAGCATGATGAAGCTTAAT+AGG + chr3_3:66476496-66476515 None:intergenic 30.0%
GTTAAGAACTTTCATTGAAG+GGG - chr3_3:66476522-66476541 Msa0465970:CDS 30.0%
! AGAAATAATTTGGGATTCTC+TGG + chr3_3:66476647-66476666 None:intergenic 30.0%
AAATAGAAACCTTAAGACAG+AGG - chr3_3:66476795-66476814 Msa0465970:CDS 30.0%
! TTTAAGACAGTCTTACATTC+AGG + chr3_3:66476838-66476857 None:intergenic 30.0%
AGACTGTCTTAAAGAATTTG+AGG - chr3_3:66476845-66476864 Msa0465970:CDS 30.0%
GACTGTCTTAAAGAATTTGA+GGG - chr3_3:66476846-66476865 Msa0465970:CDS 30.0%
AGAAGAAAGTTGAAGATGAA+TGG - chr3_3:66476905-66476924 Msa0465970:CDS 30.0%
GAAGAAAGTTGAAGATGAAT+GGG - chr3_3:66476906-66476925 Msa0465970:CDS 30.0%
!! TGAATGGGTTGATCTTAAAA+AGG - chr3_3:66476921-66476940 Msa0465970:CDS 30.0%
TCAAATTCACAATGAACATC+TGG - chr3_3:66477020-66477039 Msa0465970:CDS 30.0%
ATATATGATGGTATTACCAG+AGG - chr3_3:66477124-66477143 Msa0465970:CDS 30.0%
!! GAATAATAGTGATGGATAGT+TGG - chr3_3:66477148-66477167 Msa0465970:CDS 30.0%
! CATTTGATTTAGAAAGAACC+AGG + chr3_3:66475159-66475178 None:intergenic 30.0%
AAATCAAATGACAAGTACAG+AGG - chr3_3:66475169-66475188 Msa0465970:CDS 30.0%
ACCAAAATTCCAAAGACATA+GGG - chr3_3:66475209-66475228 Msa0465970:CDS 30.0%
CAAATGTAAATTACCCAAAG+AGG + chr3_3:66475245-66475264 None:intergenic 30.0%
CTCTTTGGGTAATTTACATT+TGG - chr3_3:66475243-66475262 Msa0465970:CDS 30.0%
TGGGTAATTTACATTTGGTT+AGG - chr3_3:66475248-66475267 Msa0465970:CDS 30.0%
GGGTAATTTACATTTGGTTA+GGG - chr3_3:66475249-66475268 Msa0465970:CDS 30.0%
AATTGAAAGGACATGTTGTA+AGG + chr3_3:66475367-66475386 None:intergenic 30.0%
! TCAATTTTCACTTGAAAACG+AGG - chr3_3:66475381-66475400 Msa0465970:CDS 30.0%
GATTCTTCTAAGTGATAAAG+TGG + chr3_3:66475451-66475470 None:intergenic 30.0%
! TTTCAATCAAGTGGTCATTT+TGG + chr3_3:66476005-66476024 None:intergenic 30.0%
ATATCCTATAATTAGAGGGA+GGG + chr3_3:66476049-66476068 None:intergenic 30.0%
!! AAACTTTCTAGTTCGGAAAT+TGG + chr3_3:66476271-66476290 None:intergenic 30.0%
TCTGAAGAGATAATTTCAAG+TGG + chr3_3:66476409-66476428 None:intergenic 30.0%
TGAAATTATCTCTTCAGACA+AGG - chr3_3:66476411-66476430 Msa0465970:intron 30.0%
!!! TAGGGATTTGGTTTTCAAAT+TGG + chr3_3:66476477-66476496 None:intergenic 30.0%
TAGCATGATGAAGCTTAATA+GGG + chr3_3:66476495-66476514 None:intergenic 30.0%
ATAGCATGATGAAGCTTAAT+AGG + chr3_3:66476496-66476515 None:intergenic 30.0%
GTTAAGAACTTTCATTGAAG+GGG - chr3_3:66476522-66476541 Msa0465970:CDS 30.0%
! AGAAATAATTTGGGATTCTC+TGG + chr3_3:66476647-66476666 None:intergenic 30.0%
AAATAGAAACCTTAAGACAG+AGG - chr3_3:66476795-66476814 Msa0465970:CDS 30.0%
! TTTAAGACAGTCTTACATTC+AGG + chr3_3:66476838-66476857 None:intergenic 30.0%
AGACTGTCTTAAAGAATTTG+AGG - chr3_3:66476845-66476864 Msa0465970:CDS 30.0%
GACTGTCTTAAAGAATTTGA+GGG - chr3_3:66476846-66476865 Msa0465970:CDS 30.0%
AGAAGAAAGTTGAAGATGAA+TGG - chr3_3:66476905-66476924 Msa0465970:CDS 30.0%
GAAGAAAGTTGAAGATGAAT+GGG - chr3_3:66476906-66476925 Msa0465970:CDS 30.0%
!! TGAATGGGTTGATCTTAAAA+AGG - chr3_3:66476921-66476940 Msa0465970:CDS 30.0%
TCAAATTCACAATGAACATC+TGG - chr3_3:66477020-66477039 Msa0465970:CDS 30.0%
ATATATGATGGTATTACCAG+AGG - chr3_3:66477124-66477143 Msa0465970:CDS 30.0%
!! GAATAATAGTGATGGATAGT+TGG - chr3_3:66477148-66477167 Msa0465970:CDS 30.0%
AGGTGAGAAAAACACAAGAA+GGG + chr3_3:66474884-66474903 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG + chr3_3:66474885-66474904 None:intergenic 35.0%
TGTTACTGACCTTACTACAT+TGG - chr3_3:66474955-66474974 Msa0465970:three_prime_UTR 35.0%
GGTTTCGATCTATGTTCAAA+GGG + chr3_3:66474986-66475005 None:intergenic 35.0%
AGGTTTCGATCTATGTTCAA+AGG + chr3_3:66474987-66475006 None:intergenic 35.0%
GAACGAAAACTAAATCGCTT+AGG + chr3_3:66475052-66475071 None:intergenic 35.0%
! CTTCCAGAATCTGGTTTATA+CGG - chr3_3:66475121-66475140 Msa0465970:exon 35.0%
AAACCGTATAAACCAGATTC+TGG + chr3_3:66475127-66475146 None:intergenic 35.0%
GACCAAAATTCCAAAGACAT+AGG - chr3_3:66475208-66475227 Msa0465970:CDS 35.0%
CCAAAATTCCAAAGACATAG+GGG - chr3_3:66475210-66475229 Msa0465970:CDS 35.0%
CAAAATTCCAAAGACATAGG+GGG - chr3_3:66475211-66475230 Msa0465970:CDS 35.0%
TTAGGGATCATGTGTTTCTT+TGG - chr3_3:66475266-66475285 Msa0465970:CDS 35.0%
CTTTGGTATCTTGACATTAG+AGG - chr3_3:66475283-66475302 Msa0465970:CDS 35.0%
! ATCCTCCACGTTTTTGTATT+TGG + chr3_3:66475336-66475355 None:intergenic 35.0%
AAATACAAAAACGTGGAGGA+TGG - chr3_3:66475335-66475354 Msa0465970:CDS 35.0%
AATACAAAAACGTGGAGGAT+GGG - chr3_3:66475336-66475355 Msa0465970:CDS 35.0%
! ATTTTCACTTGAAAACGAGG+AGG - chr3_3:66475384-66475403 Msa0465970:CDS 35.0%
! TTTTCACTTGAAAACGAGGA+GGG - chr3_3:66475385-66475404 Msa0465970:CDS 35.0%
CTTGATGCAATTTCTTAGTC+TGG + chr3_3:66475543-66475562 None:intergenic 35.0%
! GTGAGACGAAGATGTTTTAT+TGG + chr3_3:66475605-66475624 None:intergenic 35.0%
TATCCTATAATTAGAGGGAG+GGG + chr3_3:66476048-66476067 None:intergenic 35.0%
CATATCCTATAATTAGAGGG+AGG + chr3_3:66476050-66476069 None:intergenic 35.0%
TCAAGAATAGCTGCAACATT+TGG + chr3_3:66476361-66476380 None:intergenic 35.0%
GATGAAGCTTAATAGGGATT+TGG + chr3_3:66476489-66476508 None:intergenic 35.0%
GAGTTAGAGCAAAAGTTAAG+TGG - chr3_3:66476718-66476737 Msa0465970:CDS 35.0%
TCTTGTTAAGCTTAGAGACA+AGG - chr3_3:66476741-66476760 Msa0465970:CDS 35.0%
!! TAGTTATTTTGTCACCTCTG+TGG - chr3_3:66476995-66477014 Msa0465970:CDS 35.0%
TTGTGAATTTGAATCCACAG+AGG + chr3_3:66477012-66477031 None:intergenic 35.0%
ATGGATAGTTGGAACACTAT+AGG - chr3_3:66477159-66477178 Msa0465970:CDS 35.0%
AGGTGAGAAAAACACAAGAA+GGG + chr3_3:66474884-66474903 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG + chr3_3:66474885-66474904 None:intergenic 35.0%
TGTTACTGACCTTACTACAT+TGG - chr3_3:66474955-66474974 Msa0465970:three_prime_UTR 35.0%
GGTTTCGATCTATGTTCAAA+GGG + chr3_3:66474986-66475005 None:intergenic 35.0%
AGGTTTCGATCTATGTTCAA+AGG + chr3_3:66474987-66475006 None:intergenic 35.0%
GAACGAAAACTAAATCGCTT+AGG + chr3_3:66475052-66475071 None:intergenic 35.0%
! CTTCCAGAATCTGGTTTATA+CGG - chr3_3:66475121-66475140 Msa0465970:exon 35.0%
AAACCGTATAAACCAGATTC+TGG + chr3_3:66475127-66475146 None:intergenic 35.0%
GACCAAAATTCCAAAGACAT+AGG - chr3_3:66475208-66475227 Msa0465970:CDS 35.0%
CCAAAATTCCAAAGACATAG+GGG - chr3_3:66475210-66475229 Msa0465970:CDS 35.0%
CAAAATTCCAAAGACATAGG+GGG - chr3_3:66475211-66475230 Msa0465970:CDS 35.0%
TTAGGGATCATGTGTTTCTT+TGG - chr3_3:66475266-66475285 Msa0465970:CDS 35.0%
CTTTGGTATCTTGACATTAG+AGG - chr3_3:66475283-66475302 Msa0465970:CDS 35.0%
! ATCCTCCACGTTTTTGTATT+TGG + chr3_3:66475336-66475355 None:intergenic 35.0%
AAATACAAAAACGTGGAGGA+TGG - chr3_3:66475335-66475354 Msa0465970:CDS 35.0%
AATACAAAAACGTGGAGGAT+GGG - chr3_3:66475336-66475355 Msa0465970:CDS 35.0%
! ATTTTCACTTGAAAACGAGG+AGG - chr3_3:66475384-66475403 Msa0465970:CDS 35.0%
! TTTTCACTTGAAAACGAGGA+GGG - chr3_3:66475385-66475404 Msa0465970:CDS 35.0%
CTTGATGCAATTTCTTAGTC+TGG + chr3_3:66475543-66475562 None:intergenic 35.0%
! GTGAGACGAAGATGTTTTAT+TGG + chr3_3:66475605-66475624 None:intergenic 35.0%
TATCCTATAATTAGAGGGAG+GGG + chr3_3:66476048-66476067 None:intergenic 35.0%
CATATCCTATAATTAGAGGG+AGG + chr3_3:66476050-66476069 None:intergenic 35.0%
TCAAGAATAGCTGCAACATT+TGG + chr3_3:66476361-66476380 None:intergenic 35.0%
GATGAAGCTTAATAGGGATT+TGG + chr3_3:66476489-66476508 None:intergenic 35.0%
GAGTTAGAGCAAAAGTTAAG+TGG - chr3_3:66476718-66476737 Msa0465970:CDS 35.0%
TCTTGTTAAGCTTAGAGACA+AGG - chr3_3:66476741-66476760 Msa0465970:CDS 35.0%
!! TAGTTATTTTGTCACCTCTG+TGG - chr3_3:66476995-66477014 Msa0465970:CDS 35.0%
TTGTGAATTTGAATCCACAG+AGG + chr3_3:66477012-66477031 None:intergenic 35.0%
ATGGATAGTTGGAACACTAT+AGG - chr3_3:66477159-66477178 Msa0465970:CDS 35.0%
TGAGAAAAACACAAGAAGGG+GGG + chr3_3:66474881-66474900 None:intergenic 40.0%
GTGAGAAAAACACAAGAAGG+GGG + chr3_3:66474882-66474901 None:intergenic 40.0%
GGTGAGAAAAACACAAGAAG+GGG + chr3_3:66474883-66474902 None:intergenic 40.0%
AGGGTATGTCCAATGTAGTA+AGG + chr3_3:66474967-66474986 None:intergenic 40.0%
AAGAACACAGACTGAGGATA+TGG + chr3_3:66475013-66475032 None:intergenic 40.0%
TCAACTTCTGCAGTAACAGT+TGG - chr3_3:66475094-66475113 Msa0465970:three_prime_UTR 40.0%
CAACTTCTGCAGTAACAGTT+GGG - chr3_3:66475095-66475114 Msa0465970:three_prime_UTR 40.0%
!! ATACGGTTTTGTGTTTTGCC+TGG - chr3_3:66475138-66475157 Msa0465970:CDS 40.0%
!!! CCCCTATGTCTTTGGAATTT+TGG + chr3_3:66475213-66475232 None:intergenic 40.0%
CATGGCCAAATACAAAAACG+TGG - chr3_3:66475328-66475347 Msa0465970:CDS 40.0%
TGGTCAACAGAGAGGATAAT+AGG - chr3_3:66475412-66475431 Msa0465970:CDS 40.0%
ACAGAGAGGATAATAGGTTG+TGG - chr3_3:66475418-66475437 Msa0465970:CDS 40.0%
CAGAGAGGATAATAGGTTGT+GGG - chr3_3:66475419-66475438 Msa0465970:CDS 40.0%
AGAGAGGATAATAGGTTGTG+GGG - chr3_3:66475420-66475439 Msa0465970:CDS 40.0%
GAGTTGCAAGTCACAGAAAT+TGG - chr3_3:66475493-66475512 Msa0465970:CDS 40.0%
TCTTCGTCTCACATCTTTGT+AGG - chr3_3:66475613-66475632 Msa0465970:CDS 40.0%
CCATTTGTATTTGTGGCTGT+TGG + chr3_3:66475764-66475783 None:intergenic 40.0%
CCAACAGCCACAAATACAAA+TGG - chr3_3:66475761-66475780 Msa0465970:CDS 40.0%
CGTGCAACCATTTGTATTTG+TGG + chr3_3:66475771-66475790 None:intergenic 40.0%
GAGAAAACCACAAAGTTTCG+AGG - chr3_3:66475790-66475809 Msa0465970:CDS 40.0%
ATCCTATAATTAGAGGGAGG+GGG + chr3_3:66476047-66476066 None:intergenic 40.0%
CACTGTAATAGCTTCCAACA+AGG - chr3_3:66476117-66476136 Msa0465970:intron 40.0%
CTCAAACCAGACTATTGAAG+TGG - chr3_3:66476141-66476160 Msa0465970:intron 40.0%
CAACATCACTTGCTCATTGT+TGG + chr3_3:66476188-66476207 None:intergenic 40.0%
CAACAATGAGCAAGTGATGT+TGG - chr3_3:66476186-66476205 Msa0465970:intron 40.0%
TAGCTGCAACATTTGGATCT+TGG + chr3_3:66476354-66476373 None:intergenic 40.0%
TTCAAGTGGTGTCTCCAAAA+GGG + chr3_3:66476395-66476414 None:intergenic 40.0%
! TTTCAAGTGGTGTCTCCAAA+AGG + chr3_3:66476396-66476415 None:intergenic 40.0%
ATGACCAACTGCTTCAATCA+AGG - chr3_3:66476587-66476606 Msa0465970:CDS 40.0%
! AATTTGGGATTCTCTGGCTT+TGG + chr3_3:66476641-66476660 None:intergenic 40.0%
! TCTTTCTCCTTTTGCATCGA+TGG + chr3_3:66477077-66477096 None:intergenic 40.0%
! TGTTTCTTTGCTATCCACAG+AGG + chr3_3:66477105-66477124 None:intergenic 40.0%
CCATCACTATTATTCTCCTC+TGG + chr3_3:66477143-66477162 None:intergenic 40.0%
CCAGAGGAGAATAATAGTGA+TGG - chr3_3:66477140-66477159 Msa0465970:CDS 40.0%
TGAGAAAAACACAAGAAGGG+GGG + chr3_3:66474881-66474900 None:intergenic 40.0%
GTGAGAAAAACACAAGAAGG+GGG + chr3_3:66474882-66474901 None:intergenic 40.0%
GGTGAGAAAAACACAAGAAG+GGG + chr3_3:66474883-66474902 None:intergenic 40.0%
AGGGTATGTCCAATGTAGTA+AGG + chr3_3:66474967-66474986 None:intergenic 40.0%
AAGAACACAGACTGAGGATA+TGG + chr3_3:66475013-66475032 None:intergenic 40.0%
TCAACTTCTGCAGTAACAGT+TGG - chr3_3:66475094-66475113 Msa0465970:three_prime_UTR 40.0%
CAACTTCTGCAGTAACAGTT+GGG - chr3_3:66475095-66475114 Msa0465970:three_prime_UTR 40.0%
!! ATACGGTTTTGTGTTTTGCC+TGG - chr3_3:66475138-66475157 Msa0465970:CDS 40.0%
!!! CCCCTATGTCTTTGGAATTT+TGG + chr3_3:66475213-66475232 None:intergenic 40.0%
CATGGCCAAATACAAAAACG+TGG - chr3_3:66475328-66475347 Msa0465970:CDS 40.0%
TGGTCAACAGAGAGGATAAT+AGG - chr3_3:66475412-66475431 Msa0465970:CDS 40.0%
ACAGAGAGGATAATAGGTTG+TGG - chr3_3:66475418-66475437 Msa0465970:CDS 40.0%
CAGAGAGGATAATAGGTTGT+GGG - chr3_3:66475419-66475438 Msa0465970:CDS 40.0%
AGAGAGGATAATAGGTTGTG+GGG - chr3_3:66475420-66475439 Msa0465970:CDS 40.0%
GAGTTGCAAGTCACAGAAAT+TGG - chr3_3:66475493-66475512 Msa0465970:CDS 40.0%
TCTTCGTCTCACATCTTTGT+AGG - chr3_3:66475613-66475632 Msa0465970:CDS 40.0%
CCATTTGTATTTGTGGCTGT+TGG + chr3_3:66475764-66475783 None:intergenic 40.0%
CCAACAGCCACAAATACAAA+TGG - chr3_3:66475761-66475780 Msa0465970:CDS 40.0%
CGTGCAACCATTTGTATTTG+TGG + chr3_3:66475771-66475790 None:intergenic 40.0%
GAGAAAACCACAAAGTTTCG+AGG - chr3_3:66475790-66475809 Msa0465970:CDS 40.0%
ATCCTATAATTAGAGGGAGG+GGG + chr3_3:66476047-66476066 None:intergenic 40.0%
CACTGTAATAGCTTCCAACA+AGG - chr3_3:66476117-66476136 Msa0465970:intron 40.0%
CTCAAACCAGACTATTGAAG+TGG - chr3_3:66476141-66476160 Msa0465970:intron 40.0%
CAACATCACTTGCTCATTGT+TGG + chr3_3:66476188-66476207 None:intergenic 40.0%
CAACAATGAGCAAGTGATGT+TGG - chr3_3:66476186-66476205 Msa0465970:intron 40.0%
TAGCTGCAACATTTGGATCT+TGG + chr3_3:66476354-66476373 None:intergenic 40.0%
TTCAAGTGGTGTCTCCAAAA+GGG + chr3_3:66476395-66476414 None:intergenic 40.0%
! TTTCAAGTGGTGTCTCCAAA+AGG + chr3_3:66476396-66476415 None:intergenic 40.0%
ATGACCAACTGCTTCAATCA+AGG - chr3_3:66476587-66476606 Msa0465970:CDS 40.0%
! AATTTGGGATTCTCTGGCTT+TGG + chr3_3:66476641-66476660 None:intergenic 40.0%
! TCTTTCTCCTTTTGCATCGA+TGG + chr3_3:66477077-66477096 None:intergenic 40.0%
! TGTTTCTTTGCTATCCACAG+AGG + chr3_3:66477105-66477124 None:intergenic 40.0%
CCATCACTATTATTCTCCTC+TGG + chr3_3:66477143-66477162 None:intergenic 40.0%
CCAGAGGAGAATAATAGTGA+TGG - chr3_3:66477140-66477159 Msa0465970:CDS 40.0%
GCACTAAACAATCGCAGTGA+CGG + chr3_3:66474917-66474936 None:intergenic 45.0%
ACAGACTGAGGATATGGTTG+AGG + chr3_3:66475007-66475026 None:intergenic 45.0%
GCTTAGGAACTTGAGATCCA+GGG + chr3_3:66475036-66475055 None:intergenic 45.0%
GTTGGGAATCTTCCAGAATC+TGG - chr3_3:66475112-66475131 Msa0465970:three_prime_UTR 45.0%
GCTTCACACATCTCTTTGCA+TGG - chr3_3:66475310-66475329 Msa0465970:CDS 45.0%
GGCCAAATACAAAAACGTGG+AGG - chr3_3:66475331-66475350 Msa0465970:CDS 45.0%
TTGAAAACGAGGAGGGAGAA+TGG - chr3_3:66475392-66475411 Msa0465970:CDS 45.0%
GTATTTGTGGCTGTTGGAAC+TGG + chr3_3:66475758-66475777 None:intergenic 45.0%
ACCACAAAGTTTCGAGGAAG+AGG - chr3_3:66475796-66475815 Msa0465970:CDS 45.0%
TCCTCTTCCTCGAAACTTTG+TGG + chr3_3:66475800-66475819 None:intergenic 45.0%
AACCCCCTCCCTCTAATTAT+AGG - chr3_3:66476042-66476061 Msa0465970:intron 45.0%
! AGTCTGGTTTGAGTCCTTGT+TGG + chr3_3:66476134-66476153 None:intergenic 45.0%
CTGACACCACTTCAATAGTC+TGG + chr3_3:66476150-66476169 None:intergenic 45.0%
CAAGAGTCTGATTCAAGGTG+CGG + chr3_3:66476244-66476263 None:intergenic 45.0%
GCACCTTGAATCAGACTCTT+GGG - chr3_3:66476243-66476262 Msa0465970:CDS 45.0%
GATCCCAAGAGTCTGATTCA+AGG + chr3_3:66476249-66476268 None:intergenic 45.0%
ATTGTTGAGTCAGCGCACAT+AGG + chr3_3:66476319-66476338 None:intergenic 45.0%
GTGACCTTGATTGAAGCAGT+TGG + chr3_3:66476594-66476613 None:intergenic 45.0%
AGCTTAGAGACAAGGTGAAG+AGG - chr3_3:66476749-66476768 Msa0465970:CDS 45.0%
GCTTAGAGACAAGGTGAAGA+GGG - chr3_3:66476750-66476769 Msa0465970:CDS 45.0%
GTTGTGCAACCTCTGTCTTA+AGG + chr3_3:66476807-66476826 None:intergenic 45.0%
AGACAGAGGTTGCACAACAT+TGG - chr3_3:66476809-66476828 Msa0465970:CDS 45.0%
! GTCGATTCCATCGATGCAAA+AGG - chr3_3:66477067-66477086 Msa0465970:CDS 45.0%
GCACTAAACAATCGCAGTGA+CGG + chr3_3:66474917-66474936 None:intergenic 45.0%
ACAGACTGAGGATATGGTTG+AGG + chr3_3:66475007-66475026 None:intergenic 45.0%
GCTTAGGAACTTGAGATCCA+GGG + chr3_3:66475036-66475055 None:intergenic 45.0%
GTTGGGAATCTTCCAGAATC+TGG - chr3_3:66475112-66475131 Msa0465970:three_prime_UTR 45.0%
GCTTCACACATCTCTTTGCA+TGG - chr3_3:66475310-66475329 Msa0465970:CDS 45.0%
GGCCAAATACAAAAACGTGG+AGG - chr3_3:66475331-66475350 Msa0465970:CDS 45.0%
TTGAAAACGAGGAGGGAGAA+TGG - chr3_3:66475392-66475411 Msa0465970:CDS 45.0%
GTATTTGTGGCTGTTGGAAC+TGG + chr3_3:66475758-66475777 None:intergenic 45.0%
ACCACAAAGTTTCGAGGAAG+AGG - chr3_3:66475796-66475815 Msa0465970:CDS 45.0%
TCCTCTTCCTCGAAACTTTG+TGG + chr3_3:66475800-66475819 None:intergenic 45.0%
AACCCCCTCCCTCTAATTAT+AGG - chr3_3:66476042-66476061 Msa0465970:intron 45.0%
! AGTCTGGTTTGAGTCCTTGT+TGG + chr3_3:66476134-66476153 None:intergenic 45.0%
CTGACACCACTTCAATAGTC+TGG + chr3_3:66476150-66476169 None:intergenic 45.0%
CAAGAGTCTGATTCAAGGTG+CGG + chr3_3:66476244-66476263 None:intergenic 45.0%
GCACCTTGAATCAGACTCTT+GGG - chr3_3:66476243-66476262 Msa0465970:CDS 45.0%
GATCCCAAGAGTCTGATTCA+AGG + chr3_3:66476249-66476268 None:intergenic 45.0%
ATTGTTGAGTCAGCGCACAT+AGG + chr3_3:66476319-66476338 None:intergenic 45.0%
GTGACCTTGATTGAAGCAGT+TGG + chr3_3:66476594-66476613 None:intergenic 45.0%
AGCTTAGAGACAAGGTGAAG+AGG - chr3_3:66476749-66476768 Msa0465970:CDS 45.0%
GCTTAGAGACAAGGTGAAGA+GGG - chr3_3:66476750-66476769 Msa0465970:CDS 45.0%
GTTGTGCAACCTCTGTCTTA+AGG + chr3_3:66476807-66476826 None:intergenic 45.0%
AGACAGAGGTTGCACAACAT+TGG - chr3_3:66476809-66476828 Msa0465970:CDS 45.0%
! GTCGATTCCATCGATGCAAA+AGG - chr3_3:66477067-66477086 Msa0465970:CDS 45.0%
CTAAACAATCGCAGTGACGG+TGG + chr3_3:66474914-66474933 None:intergenic 50.0%
CGCTTAGGAACTTGAGATCC+AGG + chr3_3:66475037-66475056 None:intergenic 50.0%
AGCTCTTCCCCCTATGTCTT+TGG + chr3_3:66475221-66475240 None:intergenic 50.0%
AGGGAGAATGGTCAACAGAG+AGG - chr3_3:66475404-66475423 Msa0465970:CDS 50.0%
CGCACCTTGAATCAGACTCT+TGG - chr3_3:66476242-66476261 Msa0465970:CDS 50.0%
AGACAAGGTGAAGAGGGAGT+TGG - chr3_3:66476756-66476775 Msa0465970:CDS 50.0%
GGAGAAAGACACTACCTCTG+TGG - chr3_3:66477088-66477107 Msa0465970:CDS 50.0%
CTAAACAATCGCAGTGACGG+TGG + chr3_3:66474914-66474933 None:intergenic 50.0%
CGCTTAGGAACTTGAGATCC+AGG + chr3_3:66475037-66475056 None:intergenic 50.0%
AGCTCTTCCCCCTATGTCTT+TGG + chr3_3:66475221-66475240 None:intergenic 50.0%
AGGGAGAATGGTCAACAGAG+AGG - chr3_3:66475404-66475423 Msa0465970:CDS 50.0%
CGCACCTTGAATCAGACTCT+TGG - chr3_3:66476242-66476261 Msa0465970:CDS 50.0%
AGACAAGGTGAAGAGGGAGT+TGG - chr3_3:66476756-66476775 Msa0465970:CDS 50.0%
GGAGAAAGACACTACCTCTG+TGG - chr3_3:66477088-66477107 Msa0465970:CDS 50.0%
CCAGGGAAGAACACAGACTG+AGG + chr3_3:66475019-66475038 None:intergenic 55.0%
CCTCAGTCTGTGTTCTTCCC+TGG - chr3_3:66475016-66475035 Msa0465970:three_prime_UTR 55.0%
AGGGGGAAGAGCTACCTCTT+TGG - chr3_3:66475228-66475247 Msa0465970:CDS 55.0%
GGGGGAAGAGCTACCTCTTT+GGG - chr3_3:66475229-66475248 Msa0465970:CDS 55.0%
CCAGGGAAGAACACAGACTG+AGG + chr3_3:66475019-66475038 None:intergenic 55.0%
CCTCAGTCTGTGTTCTTCCC+TGG - chr3_3:66475016-66475035 Msa0465970:three_prime_UTR 55.0%
AGGGGGAAGAGCTACCTCTT+TGG - chr3_3:66475228-66475247 Msa0465970:CDS 55.0%
GGGGGAAGAGCTACCTCTTT+GGG - chr3_3:66475229-66475248 Msa0465970:CDS 55.0%
GCAGTGACGGTGGAAGCTGA+AGG + chr3_3:66474904-66474923 None:intergenic 60.0%
GCAGTGACGGTGGAAGCTGA+AGG + chr3_3:66474904-66474923 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66474851 66477253 66474851 ID=Msa0465970;Name=Msa0465970
chr3_3 mRNA 66474851 66477253 66474851 ID=Msa0465970-mRNA-1;Parent=Msa0465970;Name=Msa0465970-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.66|1|1|1|3|287|589
chr3_3 exon 66474851 66475992 66474851 ID=Msa0465970-mRNA-1:exon:15066;Parent=Msa0465970-mRNA-1
chr3_3 exon 66476215 66476345 66476215 ID=Msa0465970-mRNA-1:exon:15065;Parent=Msa0465970-mRNA-1
chr3_3 exon 66476470 66477253 66476470 ID=Msa0465970-mRNA-1:exon:15064;Parent=Msa0465970-mRNA-1
chr3_3 CDS 66476470 66477253 66476470 ID=Msa0465970-mRNA-1:cds;Parent=Msa0465970-mRNA-1
chr3_3 CDS 66476215 66476345 66476215 ID=Msa0465970-mRNA-1:cds;Parent=Msa0465970-mRNA-1
chr3_3 CDS 66475138 66475992 66475138 ID=Msa0465970-mRNA-1:cds;Parent=Msa0465970-mRNA-1
chr3_3 three_prime_UTR 66474851 66475137 66474851 ID=Msa0465970-mRNA-1:three_prime_utr;Parent=Msa0465970-mRNA-1
Gene Sequence

>Msa0465970

CGAAGAATTTTTCAAAACGCAATTCAACCCCCCTTCTTGTGTTTTTCTCACCTTCAGCTTCCACCGTCACTGCGATTGTTTAGTGCTATTAACTGCATTTCTCTTGTTACTGACCTTACTACATTGGACATACCCTTTGAACATAGATCGAAACCTCAACCATATCCTCAGTCTGTGTTCTTCCCTGGATCTCAAGTTCCTAAGCGATTTAGTTTTCGTTCTGAAGAAAATTATCATCGGTGTTCAACTTCTGCAGTAACAGTTGGGAATCTTCCAGAATCTGGTTTATACGGTTTTGTGTTTTGCCTGGTTCTTTCTAAATCAAATGACAAGTACAGAGGTGTTCAATGCAATATTGACCAAAATTCCAAAGACATAGGGGGAAGAGCTACCTCTTTGGGTAATTTACATTTGGTTAGGGATCATGTGTTTCTTTGGTATCTTGACATTAGAGGTGCTGCTTCACACATCTCTTTGCATGGCCAAATACAAAAACGTGGAGGATGGGATAATCCTTACAACATGTCCTTTCAATTTTCACTTGAAAACGAGGAGGGAGAATGGTCAACAGAGAGGATAATAGGTTGTGGGGTGTTACCACTTTATCACTTAGAAGAATCCAATAACTATGATGAGAAGAATGAGTTGCAAGTCACAGAAATTGGATCTTATCATATAAATGAAGAGGACCAGACTAAGAAATTGCATCAAGTTACAATTGCAACTTGCATTAAAGATGAAAAACTGGACTCCAATAAAACATCTTCGTCTCACATCTTTGTAGTTCCAACAGCCACAAATACAAATGGTTGCACGAGAAAACCACAAAGTTTCGAGGAAGAGGAATGCTATGAAAGTTCTGTCAAAAAATTAAAGGCTTGCTATACAAATACAAGTTCAACATCTAAGAGTCAATTTGACACTGTAATAGCTTCCAACAAGGACTCAAACCAGACTATTGAAGTGGTGTCAGAAGAAGACGACTTGACCAACAATGAGCAAGTGATGTTGGACAGAGTTGTTAGTCATGTGAAGATCGATAGTCCGCACCTTGAATCAGACTCTTGGGATCCAATTTCCGAACTAGAAAGTTTGTTACATGATAGTTATAAGTTGTCTCCTATGTGCGCTGACTCAACAATTGTTTCAGTGCTCCAAGATCCAAATGTTGCAGCTATTCTTGAAAATTTAGAAACCCTTTTGGAGACACCACTTGAAATTATCTCTTCAGACAAGGAAGTGAAGAAAAAGTTCCATAAAATTTTGGAACAACTTGGCCAATTTGAAAACCAAATCCCTATTAAGCTTCATCATGCTATTTGTAAGTTAAGAACTTTCATTGAAGGGGTTGATGTCAGATTTGTGAGTGCTCAAAATACTATTCAAGATTATGACCAACTGCTTCAATCAAGGTCACTTATATCAAAGAAATTGGAAAGTTCCAAAGCCAGAGAATCCCAAATTATTTCTGAAATATCTCGAGGTAAAATACAATTTGAAAAGATCAATTCTGAGATTGTTGAGTTAGAGCAAAAGTTAAGTGGTCTTGTTAAGCTTAGAGACAAGGTGAAGAGGGAGTTGGAGCATTTTGAAGTGATAAATAGAAACCTTAAGACAGAGGTTGCACAACATTGGCTTCCTGAATGTAAGACTGTCTTAAAGAATTTGAGGGAGTCTGAAACTTCTTACAAAGTTGCCTTATCCAATAAGAAGAAAGTTGAAGATGAATGGGTTGATCTTAAAAAGGCATTTTCCGCCAATAAAATTTGA

Protein sequence

>Msa0465970

RRIFQNAIQPPFLCFSHLQLPPSLRLFSAINCISLVTDLTTLDIPFEHRSKPQPYPQSVFFPGSQVPKRFSFRSEENYHRCSTSAVTVGNLPESGLYGFVFCLVLSKSNDKYRGVQCNIDQNSKDIGGRATSLGNLHLVRDHVFLWYLDIRGAASHISLHGQIQKRGGWDNPYNMSFQFSLENEEGEWSTERIIGCGVLPLYHLEESNNYDEKNELQVTEIGSYHINEEDQTKKLHQVTIATCIKDEKLDSNKTSSSHIFVVPTATNTNGCTRKPQSFEEEECYESSVKKLKACYTNTSSTSKSQFDTVIASNKDSNQTIEVVSEEDDLTNNEQVMLDRVVSHVKIDSPHLESDSWDPISELESLLHDSYKLSPMCADSTIVSVLQDPNVAAILENLETLLETPLEIISSDKEVKKKFHKILEQLGQFENQIPIKLHHAICKLRTFIEGVDVRFVSAQNTIQDYDQLLQSRSLISKKLESSKARESQIISEISRGKIQFEKINSEIVELEQKLSGLVKLRDKVKRELEHFEVINRNLKTEVAQHWLPECKTVLKNLRESETSYKVALSNKKKVEDEWVDLKKAFSANKI*