Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412760 | sp|Q09893|YAI5_SCHPO | 33.480 | 227 | 136 | 9 | 9 | 226 | 3 | 223 | 6.17e-21 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412760 | I3SRG9 | 96.787 | 249 | 8 | 0 | 1 | 249 | 9 | 257 | 0.0 | 506 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024890 | Msa1412760 | 0.801255 | 9.814542e-49 | -8.615850e-47 |
| Msa0034310 | Msa1412760 | 0.979920 | 4.854622e-149 | -8.615850e-47 |
| Msa0081310 | Msa1412760 | 0.984108 | 1.302625e-159 | -8.615850e-47 |
| Msa1412760 | Msa1416470 | 0.981737 | 2.535706e-153 | -8.615850e-47 |
| Msa1412760 | Msa1449670 | 0.982553 | 2.176881e-155 | -8.615850e-47 |
| Msa0722930 | Msa1412760 | -0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0723140 | Msa1412760 | -0.814471 | 1.515210e-51 | -8.615850e-47 |
| Msa0745460 | Msa1412760 | 0.811991 | 5.307593e-51 | -8.615850e-47 |
| Msa0796430 | Msa1412760 | 0.802918 | 4.465461e-49 | -8.615850e-47 |
| Msa0807050 | Msa1412760 | -0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa0832990 | Msa1412760 | -0.803672 | 3.117332e-49 | -8.615850e-47 |
| Msa0834270 | Msa1412760 | 0.824612 | 7.343585e-54 | -8.615850e-47 |
| Msa0139720 | Msa1412760 | 0.800871 | 1.175872e-48 | -8.615850e-47 |
| Msa0173620 | Msa1412760 | 0.978121 | 3.629542e-145 | -8.615850e-47 |
| Msa1257870 | Msa1412760 | 0.806188 | 9.284569e-50 | -8.615850e-47 |
| Msa1287160 | Msa1412760 | -0.803430 | 3.499460e-49 | -8.615850e-47 |
| Msa1327320 | Msa1412760 | -0.812966 | 3.248688e-51 | -8.615850e-47 |
| Msa0465970 | Msa1412760 | -0.812432 | 4.251648e-51 | -8.615850e-47 |
| Msa1002990 | Msa1412760 | 0.980045 | 2.540534e-149 | -8.615850e-47 |
| Msa1080790 | Msa1412760 | -0.826861 | 2.149982e-54 | -8.615850e-47 |
| Msa0242700 | Msa1412760 | 0.853522 | 2.260922e-61 | -8.615850e-47 |
| Msa0280950 | Msa1412760 | 0.809070 | 2.269031e-50 | -8.615850e-47 |
| Msa1118930 | Msa1412760 | -0.821837 | 3.264648e-53 | -8.615850e-47 |
| Msa1132560 | Msa1412760 | 0.804185 | 2.439248e-49 | -8.615850e-47 |
| Msa1132950 | Msa1412760 | -0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa1194940 | Msa1412760 | -0.810878 | 9.260046e-51 | -8.615850e-47 |
| Msa0921080 | Msa1412760 | -0.808539 | 2.947337e-50 | -8.615850e-47 |
| Msa0951720 | Msa1412760 | -0.813725 | 2.213476e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412760 | MtrunA17_Chr1g0193721 | 96.787 | 249 | 8 | 0 | 1 | 249 | 1 | 249 | 0.0 | 504 |
| Msa1412760 | MtrunA17_Chr7g0238911 | 50.694 | 288 | 94 | 2 | 10 | 249 | 14 | 301 | 1.35e-100 | 295 |
| Msa1412760 | MtrunA17_Chr2g0328451 | 49.129 | 287 | 107 | 3 | 2 | 249 | 5 | 291 | 3.93e-96 | 283 |
| Msa1412760 | MtrunA17_Chr4g0031841 | 50.545 | 275 | 106 | 3 | 4 | 249 | 8 | 281 | 7.90e-96 | 282 |
| Msa1412760 | MtrunA17_Chr4g0009921 | 51.111 | 270 | 87 | 2 | 4 | 228 | 9 | 278 | 5.16e-94 | 278 |
| Msa1412760 | MtrunA17_Chr4g0009961 | 47.405 | 289 | 103 | 1 | 10 | 249 | 12 | 300 | 5.91e-91 | 270 |
| Msa1412760 | MtrunA17_Chr1g0205581 | 48.085 | 235 | 112 | 4 | 11 | 235 | 10 | 244 | 1.12e-75 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1412760 | AT3G62040.1 | 71.698 | 212 | 57 | 3 | 41 | 249 | 1 | 212 | 1.43e-107 | 310 |
| Msa1412760 | AT5G59480.4 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 3.99e-98 | 288 |
| Msa1412760 | AT5G59480.5 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 3.99e-98 | 288 |
| Msa1412760 | AT5G59480.3 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 3.99e-98 | 288 |
| Msa1412760 | AT5G59480.1 | 50.549 | 273 | 104 | 2 | 4 | 245 | 8 | 280 | 3.99e-98 | 288 |
| Msa1412760 | AT5G59480.2 | 50.549 | 273 | 103 | 3 | 4 | 245 | 8 | 279 | 6.97e-96 | 282 |
| Msa1412760 | AT5G02230.2 | 52.060 | 267 | 101 | 3 | 10 | 249 | 14 | 280 | 3.10e-88 | 263 |
| Msa1412760 | AT5G02230.1 | 52.060 | 267 | 101 | 3 | 10 | 249 | 14 | 280 | 3.10e-88 | 263 |
| Msa1412760 | AT5G02230.3 | 52.060 | 267 | 101 | 3 | 10 | 249 | 51 | 317 | 1.37e-87 | 263 |
| Msa1412760 | AT5G59490.1 | 52.529 | 257 | 105 | 3 | 10 | 249 | 10 | 266 | 3.98e-87 | 259 |
| Msa1412760 | AT2G32150.1 | 48.198 | 222 | 108 | 2 | 13 | 227 | 8 | 229 | 2.30e-77 | 234 |
| Msa1412760 | AT5G59490.2 | 57.143 | 203 | 75 | 2 | 10 | 200 | 10 | 212 | 1.98e-71 | 218 |
| Msa1412760 | AT2G32150.2 | 48.980 | 196 | 93 | 2 | 12 | 200 | 7 | 202 | 1.80e-66 | 206 |
| Msa1412760 | AT2G32150.3 | 49.714 | 175 | 81 | 2 | 13 | 180 | 8 | 182 | 1.95e-58 | 184 |
Find 79 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCAACCTCCCATATTTC+AGG | 0.199588 | tig0023943:+78479 | None:intergenic |
| CAATTAAACACCATAGTTTA+AGG | 0.205482 | tig0023943:-80401 | Msa1412760:five_prime_UTR |
| GAGAAGCATTACCTGAAATA+TGG | 0.252058 | tig0023943:-78490 | Msa1412760:CDS |
| ATTGAGCTTAGGGATCAATT+TGG | 0.331635 | tig0023943:-79713 | Msa1412760:CDS |
| AATACCTGGACCTTAAACTA+TGG | 0.336568 | tig0023943:+80391 | None:intergenic |
| ATTCGTTGGTAGGAGTTGAT+AGG | 0.339282 | tig0023943:+78959 | None:intergenic |
| TTGCAATTGGCATCACAAAA+TGG | 0.340643 | tig0023943:-78261 | Msa1412760:three_prime_UTR |
| AGGTTCCTTAACACGAAATC+TGG | 0.347342 | tig0023943:+79188 | None:intergenic |
| AATATACCGAACGAAATTAC+TGG | 0.354237 | tig0023943:-78193 | Msa1412760:three_prime_UTR |
| GGCTTGGAAGATTGCTTTGA+GGG | 0.359868 | tig0023943:-79007 | Msa1412760:CDS |
| ATGGATACTCAAAGGATTGC+TGG | 0.374412 | tig0023943:-79908 | Msa1412760:CDS |
| TGAACTTTGCATTTAATAGT+TGG | 0.387686 | tig0023943:+78235 | None:intergenic |
| ACCATCTGTGGAAGCCTTTG+AGG | 0.394435 | tig0023943:-78927 | Msa1412760:CDS |
| CTCTCTACCCATTGAGCTTA+GGG | 0.404141 | tig0023943:-79723 | Msa1412760:CDS |
| TCTGGCTTCAGTTTCTCATA+TGG | 0.405723 | tig0023943:+79206 | None:intergenic |
| ATATACTCGTAACAGTGATC+TGG | 0.410966 | tig0023943:+78070 | None:intergenic |
| TACAAATCCAGACACATCTT+TGG | 0.424509 | tig0023943:+79441 | None:intergenic |
| AAATGTATGAATCTTGCAAT+TGG | 0.426552 | tig0023943:-78274 | Msa1412760:three_prime_UTR |
| CTTATTTCCTGTCAGGCCCT+TGG | 0.430815 | tig0023943:-79278 | Msa1412760:intron |
| ACTCTCTACCCATTGAGCTT+AGG | 0.439304 | tig0023943:-79724 | Msa1412760:CDS |
| TGAAGCCAGATTTCGTGTTA+AGG | 0.440016 | tig0023943:-79193 | Msa1412760:CDS |
| TGGCTTCGACTGCAAGAGAT+TGG | 0.449210 | tig0023943:+78435 | None:intergenic |
| TGGCTTGGAAGATTGCTTTG+AGG | 0.450052 | tig0023943:-79008 | Msa1412760:CDS |
| TCTAGAACATGGAACAACTA+TGG | 0.451217 | tig0023943:-79418 | Msa1412760:CDS |
| TTCGTTGGTAGGAGTTGATA+GGG | 0.461128 | tig0023943:+78960 | None:intergenic |
| AATTGATCCCTAAGCTCAAT+GGG | 0.468495 | tig0023943:+79716 | None:intergenic |
| TATAGTACCAAAGATGTGTC+TGG | 0.470960 | tig0023943:-79448 | Msa1412760:CDS |
| AGTTCTCAGCAGGCTTGGCT+TGG | 0.483634 | tig0023943:-79023 | Msa1412760:CDS |
| GGTCGATCGGATTTAGTGCC+TGG | 0.483986 | tig0023943:-78548 | Msa1412760:CDS |
| GCCTCAAAGGCTTCCACAGA+TGG | 0.484285 | tig0023943:+78926 | None:intergenic |
| GTTGAAGTTCTCAGCAGGCT+TGG | 0.485005 | tig0023943:-79028 | Msa1412760:CDS |
| AAATTGATCCCTAAGCTCAA+TGG | 0.485829 | tig0023943:+79715 | None:intergenic |
| AACACCATAGTTTAAGGTCC+AGG | 0.491638 | tig0023943:-80395 | Msa1412760:intron |
| GTTGCAAGCGGAAAAGTAGC+TGG | 0.495148 | tig0023943:-78704 | Msa1412760:CDS |
| TAGTATACCTTGCACAAACT+AGG | 0.495714 | tig0023943:+78123 | None:intergenic |
| CTATCAACCACGCCGTCTCC+AGG | 0.500226 | tig0023943:-78103 | Msa1412760:three_prime_UTR |
| AGAAGCATTACCTGAAATAT+GGG | 0.503577 | tig0023943:-78489 | Msa1412760:CDS |
| GAGATTGGATCATTTGTTGT+TGG | 0.507343 | tig0023943:+78450 | None:intergenic |
| GATTCAAAGCTCTTTCAAGA+TGG | 0.508100 | tig0023943:-79927 | Msa1412760:exon |
| GCTTTCTTTAAGACGTTTCG+CGG | 0.509643 | tig0023943:-78152 | Msa1412760:three_prime_UTR |
| CTTGTTTACAGAGCATATGT+TGG | 0.516527 | tig0023943:-79493 | Msa1412760:intron |
| AACAACTATGGCAGGAATGA+AGG | 0.518265 | tig0023943:-79406 | Msa1412760:intron |
| ATGCGGTTGAAGTTCTCAGC+AGG | 0.526884 | tig0023943:-79033 | Msa1412760:CDS |
| TTTGCAGAGGATTCGTTGGT+AGG | 0.536737 | tig0023943:+78949 | None:intergenic |
| GAACATGGAACAACTATGGC+AGG | 0.541348 | tig0023943:-79414 | Msa1412760:CDS |
| ACTCACCCAGTAATTTCGTT+CGG | 0.548375 | tig0023943:+78187 | None:intergenic |
| AATCCTCTGCAAACCATCTG+TGG | 0.549541 | tig0023943:-78939 | Msa1412760:CDS |
| CATTGTCAAATTCGTAGCCA+AGG | 0.549744 | tig0023943:+79261 | None:intergenic |
| TTCAGAGCATGGTCAGCACC+AGG | 0.555322 | tig0023943:+78530 | None:intergenic |
| ATCGAAGCAAAACTTATGCA+TGG | 0.557183 | tig0023943:+78408 | None:intergenic |
| ATCTCTTGCAGTCGAAGCCA+CGG | 0.558687 | tig0023943:-78432 | Msa1412760:CDS |
| ATGGTTTGCAGAGGATTCGT+TGG | 0.560194 | tig0023943:+78945 | None:intergenic |
| AGTATACCTTGCACAAACTA+GGG | 0.562541 | tig0023943:+78124 | None:intergenic |
| TATACTCGTAACAGTGATCT+GGG | 0.563092 | tig0023943:+78071 | None:intergenic |
| GAGTTTCATGCTTATGTGCA+TGG | 0.564136 | tig0023943:-79236 | Msa1412760:CDS |
| TTACTGGGTGAGTCACGACC+AGG | 0.566531 | tig0023943:-78177 | Msa1412760:three_prime_UTR |
| CTGGATTTGTATCTAGAACA+TGG | 0.570926 | tig0023943:-79429 | Msa1412760:CDS |
| TTGATGACAGGTGGGTCGAT+CGG | 0.573116 | tig0023943:-78561 | Msa1412760:intron |
| TATGAATGCTGTTCAGAGCA+TGG | 0.576032 | tig0023943:+78519 | None:intergenic |
| CTTTCAAGATGGATACTCAA+AGG | 0.580368 | tig0023943:-79916 | Msa1412760:exon |
| CGCATGTGCGTGATCTGCGT+TGG | 0.594208 | tig0023943:+79051 | None:intergenic |
| CTTCCACAGATGGTTTGCAG+AGG | 0.599046 | tig0023943:+78936 | None:intergenic |
| AATTCTAATAGCAGCCTCAA+AGG | 0.600461 | tig0023943:+78913 | None:intergenic |
| ATATACCGAACGAAATTACT+GGG | 0.604916 | tig0023943:-78192 | Msa1412760:three_prime_UTR |
| ATTTAAGCACCACCATGCCA+TGG | 0.607196 | tig0023943:+78293 | None:intergenic |
| TTGTAATGGCCTCCATGGCA+TGG | 0.611695 | tig0023943:-78305 | Msa1412760:three_prime_UTR |
| ATTGTCAAATTCGTAGCCAA+GGG | 0.618916 | tig0023943:+79262 | None:intergenic |
| AGTGTTAGAAATGTTGCAAG+CGG | 0.624326 | tig0023943:-78716 | Msa1412760:CDS |
| GTATGTCGCAAGAACATACA+AGG | 0.629955 | tig0023943:-79691 | Msa1412760:intron |
| GCTGAGGCATGGAAAGCAGA+AGG | 0.639829 | tig0023943:+79168 | None:intergenic |
| AGATAGACAAAACTCTGCTG+AGG | 0.650985 | tig0023943:+78343 | None:intergenic |
| CAACGCAGATCACGCACATG+CGG | 0.653925 | tig0023943:-79050 | Msa1412760:CDS |
| GCACTACCCTAGTTTGTGCA+AGG | 0.661073 | tig0023943:-78130 | Msa1412760:three_prime_UTR |
| ACGTCTTAAAGAAAGCGACC+TGG | 0.675817 | tig0023943:+78159 | None:intergenic |
| AGCATTACCTGAAATATGGG+AGG | 0.676770 | tig0023943:-78486 | Msa1412760:CDS |
| TAATGGCCTCCATGGCATGG+TGG | 0.680313 | tig0023943:-78302 | Msa1412760:three_prime_UTR |
| TAAGCACCACCATGCCATGG+AGG | 0.695428 | tig0023943:+78296 | None:intergenic |
| CAAAACTTATGCATGGACCG+TGG | 0.699924 | tig0023943:+78415 | None:intergenic |
| TATATCTTACAATAACAGTG+TGG | 0.713748 | tig0023943:+78678 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATGTATTATTTTATTATA+TGG | - | tig0023943:78192-78211 | Msa1412760:three_prime_UTR | 10.0% |
| !!! | TTAAAAGTAAATATTGATTA+TGG | - | tig0023943:78708-78727 | Msa1412760:CDS | 10.0% |
| !!! | TGATGTATTATTTTATTATA+TGG | - | tig0023943:78192-78211 | Msa1412760:three_prime_UTR | 10.0% |
| !!! | TTAAAAGTAAATATTGATTA+TGG | - | tig0023943:78708-78727 | Msa1412760:CDS | 10.0% |
| !!! | GAAAAGTATATAAAAACTAA+AGG | + | tig0023943:78127-78146 | None:intergenic | 15.0% |
| !!! | AAAGAATATTTTGAGTATTA+CGG | + | tig0023943:79406-79425 | None:intergenic | 15.0% |
| !!! | AATCTACAATAATTTTGTAA+TGG | - | tig0023943:80169-80188 | Msa1412760:intron | 15.0% |
| !!! | GAAAAGTATATAAAAACTAA+AGG | + | tig0023943:78127-78146 | None:intergenic | 15.0% |
| !!! | AAAGAATATTTTGAGTATTA+CGG | + | tig0023943:79406-79425 | None:intergenic | 15.0% |
| !!! | AATCTACAATAATTTTGTAA+TGG | - | tig0023943:80169-80188 | Msa1412760:intron | 15.0% |
| !! | TAATAATCTTGCATGAATAT+TGG | - | tig0023943:78640-78659 | Msa1412760:intron | 20.0% |
| !! | TTCTATATGAAAATTTGAAG+AGG | + | tig0023943:78683-78702 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATATAGA+AGG | - | tig0023943:78682-78701 | Msa1412760:intron | 20.0% |
| !! | TAATAATCTTGCATGAATAT+TGG | - | tig0023943:78640-78659 | Msa1412760:intron | 20.0% |
| !! | TTCTATATGAAAATTTGAAG+AGG | + | tig0023943:78683-78702 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATATAGA+AGG | - | tig0023943:78682-78701 | Msa1412760:intron | 20.0% |
| ! | CAATTAAACACCATAGTTTA+AGG | - | tig0023943:78087-78106 | Msa1412760:three_prime_UTR | 25.0% |
| ! | AATATCAAGACCTTAATGAA+AGG | + | tig0023943:78157-78176 | None:intergenic | 25.0% |
| ! | TATTATATGGTCCATAATGA+TGG | - | tig0023943:78205-78224 | Msa1412760:three_prime_UTR | 25.0% |
| ! | TTGATCATCAATCATTTCAT+GGG | + | tig0023943:78266-78285 | None:intergenic | 25.0% |
| ! | TTTGATCATCAATCATTTCA+TGG | + | tig0023943:78267-78286 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTCAGACTTTT+CGG | - | tig0023943:78417-78436 | Msa1412760:exon | 25.0% |
| ! | TATATGAATAATCTGAACAC+TGG | + | tig0023943:78861-78880 | None:intergenic | 25.0% |
| ! | AAACAAGATTGATCAACTAT+AGG | + | tig0023943:78982-79001 | None:intergenic | 25.0% |
| ! | AGTAAGTCAATAAAAAACTG+TGG | + | tig0023943:79127-79146 | None:intergenic | 25.0% |
| !! | ATCAATCTTACTGTTTTCTT+TGG | + | tig0023943:79613-79632 | None:intergenic | 25.0% |
| ! | TATATCTTACAATAACAGTG+TGG | + | tig0023943:79813-79832 | None:intergenic | 25.0% |
| ! | AAATGTATGAATCTTGCAAT+TGG | - | tig0023943:80214-80233 | Msa1412760:intron | 25.0% |
| ! | TGAACTTTGCATTTAATAGT+TGG | + | tig0023943:80256-80275 | None:intergenic | 25.0% |
| ! | CAATTAAACACCATAGTTTA+AGG | - | tig0023943:78087-78106 | Msa1412760:three_prime_UTR | 25.0% |
| ! | AATATCAAGACCTTAATGAA+AGG | + | tig0023943:78157-78176 | None:intergenic | 25.0% |
| ! | TATTATATGGTCCATAATGA+TGG | - | tig0023943:78205-78224 | Msa1412760:three_prime_UTR | 25.0% |
| ! | TTGATCATCAATCATTTCAT+GGG | + | tig0023943:78266-78285 | None:intergenic | 25.0% |
| ! | TTTGATCATCAATCATTTCA+TGG | + | tig0023943:78267-78286 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTCAGACTTTT+CGG | - | tig0023943:78417-78436 | Msa1412760:exon | 25.0% |
| ! | TATATGAATAATCTGAACAC+TGG | + | tig0023943:78861-78880 | None:intergenic | 25.0% |
| ! | AAACAAGATTGATCAACTAT+AGG | + | tig0023943:78982-79001 | None:intergenic | 25.0% |
| ! | AGTAAGTCAATAAAAAACTG+TGG | + | tig0023943:79127-79146 | None:intergenic | 25.0% |
| !! | ATCAATCTTACTGTTTTCTT+TGG | + | tig0023943:79613-79632 | None:intergenic | 25.0% |
| ! | TATATCTTACAATAACAGTG+TGG | + | tig0023943:79813-79832 | None:intergenic | 25.0% |
| ! | AAATGTATGAATCTTGCAAT+TGG | - | tig0023943:80214-80233 | Msa1412760:intron | 25.0% |
| ! | TGAACTTTGCATTTAATAGT+TGG | + | tig0023943:80256-80275 | None:intergenic | 25.0% |
| AAACTAAAGGAAACAATACC+TGG | + | tig0023943:78114-78133 | None:intergenic | 30.0% | |
| TGATCACAGAATTAAATGCT+AGG | + | tig0023943:78293-78312 | None:intergenic | 30.0% | |
| CAACAAGTATGTCTTTCTTA+TGG | - | tig0023943:78311-78330 | Msa1412760:three_prime_UTR | 30.0% | |
| GTCTTTCTTATGGTCAAATT+TGG | - | tig0023943:78321-78340 | Msa1412760:three_prime_UTR | 30.0% | |
| !! | TCTTTGAAACGTACTTTGTT+AGG | - | tig0023943:78375-78394 | Msa1412760:three_prime_UTR | 30.0% |
| ! | TTTTCTTTGTTCTTTCTCCA+AGG | + | tig0023943:78510-78529 | None:intergenic | 30.0% |
| !!! | GCACTCATAGTTTATTTTAG+AGG | - | tig0023943:78825-78844 | Msa1412760:intron | 30.0% |
| !! | TTTAAGTCTTATTTCCTGTC+AGG | - | tig0023943:79203-79222 | Msa1412760:CDS | 30.0% |
| ATGCTCTTTAATGAACAAAC+TGG | + | tig0023943:79383-79402 | None:intergenic | 30.0% | |
| TACTTACCTAAAAAGTGACA+TGG | - | tig0023943:79633-79652 | Msa1412760:intron | 30.0% | |
| ! | GAGAGATTACTTCTTTTATG+TGG | - | tig0023943:79655-79674 | Msa1412760:intron | 30.0% |
| !!! | CTATAGATTTTTTTACCCCT+AGG | - | tig0023943:79684-79703 | Msa1412760:intron | 30.0% |
| TTCTATCTATGCATCATATG+TGG | - | tig0023943:79836-79855 | Msa1412760:intron | 30.0% | |
| ! | AGTAACAACATATTGATGAC+AGG | - | tig0023943:79915-79934 | Msa1412760:exon | 30.0% |
| !! | AGAAGCATTACCTGAAATAT+GGG | - | tig0023943:79999-80018 | Msa1412760:intron | 30.0% |
| AATATACCGAACGAAATTAC+TGG | - | tig0023943:80295-80314 | Msa1412760:intron | 30.0% | |
| ATATACCGAACGAAATTACT+GGG | - | tig0023943:80296-80315 | Msa1412760:intron | 30.0% | |
| AAACTAAAGGAAACAATACC+TGG | + | tig0023943:78114-78133 | None:intergenic | 30.0% | |
| TGATCACAGAATTAAATGCT+AGG | + | tig0023943:78293-78312 | None:intergenic | 30.0% | |
| CAACAAGTATGTCTTTCTTA+TGG | - | tig0023943:78311-78330 | Msa1412760:three_prime_UTR | 30.0% | |
| GTCTTTCTTATGGTCAAATT+TGG | - | tig0023943:78321-78340 | Msa1412760:three_prime_UTR | 30.0% | |
| !! | TCTTTGAAACGTACTTTGTT+AGG | - | tig0023943:78375-78394 | Msa1412760:three_prime_UTR | 30.0% |
| ! | TTTTCTTTGTTCTTTCTCCA+AGG | + | tig0023943:78510-78529 | None:intergenic | 30.0% |
| !!! | GCACTCATAGTTTATTTTAG+AGG | - | tig0023943:78825-78844 | Msa1412760:intron | 30.0% |
| !! | TTTAAGTCTTATTTCCTGTC+AGG | - | tig0023943:79203-79222 | Msa1412760:CDS | 30.0% |
| ATGCTCTTTAATGAACAAAC+TGG | + | tig0023943:79383-79402 | None:intergenic | 30.0% | |
| TACTTACCTAAAAAGTGACA+TGG | - | tig0023943:79633-79652 | Msa1412760:intron | 30.0% | |
| ! | GAGAGATTACTTCTTTTATG+TGG | - | tig0023943:79655-79674 | Msa1412760:intron | 30.0% |
| !!! | CTATAGATTTTTTTACCCCT+AGG | - | tig0023943:79684-79703 | Msa1412760:intron | 30.0% |
| TTCTATCTATGCATCATATG+TGG | - | tig0023943:79836-79855 | Msa1412760:intron | 30.0% | |
| ! | AGTAACAACATATTGATGAC+AGG | - | tig0023943:79915-79934 | Msa1412760:exon | 30.0% |
| !! | AGAAGCATTACCTGAAATAT+GGG | - | tig0023943:79999-80018 | Msa1412760:intron | 30.0% |
| AATATACCGAACGAAATTAC+TGG | - | tig0023943:80295-80314 | Msa1412760:intron | 30.0% | |
| ATATACCGAACGAAATTACT+GGG | - | tig0023943:80296-80315 | Msa1412760:intron | 30.0% | |
| AATACCTGGACCTTAAACTA+TGG | + | tig0023943:78100-78119 | None:intergenic | 35.0% | |
| TTCCATTCCACCTTTCATTA+AGG | - | tig0023943:78144-78163 | Msa1412760:three_prime_UTR | 35.0% | |
| ATCAAGACCTTAATGAAAGG+TGG | + | tig0023943:78154-78173 | None:intergenic | 35.0% | |
| AGTAACGTTGTCCATCATTA+TGG | + | tig0023943:78219-78238 | None:intergenic | 35.0% | |
| !! | GTGTTGATCGCTTAGATTTT+TGG | - | tig0023943:78345-78364 | Msa1412760:three_prime_UTR | 35.0% |
| TAAGATCTCAAAACTTGCCT+TGG | - | tig0023943:78490-78509 | Msa1412760:CDS | 35.0% | |
| GATTCAAAGCTCTTTCAAGA+TGG | - | tig0023943:78561-78580 | Msa1412760:intron | 35.0% | |
| CTTTCAAGATGGATACTCAA+AGG | - | tig0023943:78572-78591 | Msa1412760:intron | 35.0% | |
| !! | AAATACGAGTGCTTGCTTTT+TGG | - | tig0023943:78607-78626 | Msa1412760:intron | 35.0% |
| !!! | TGCTTGCTTTTTGGTATGAA+TGG | - | tig0023943:78616-78635 | Msa1412760:intron | 35.0% |
| TTGATTATGGTTCCACATGT+TGG | - | tig0023943:78721-78740 | Msa1412760:CDS | 35.0% | |
| TATCTGTTGTTACCAACATG+TGG | + | tig0023943:78736-78755 | None:intergenic | 35.0% | |
| !! | CATGTTGGTAACAACAGATA+TGG | - | tig0023943:78736-78755 | Msa1412760:intron | 35.0% |
| AATTGATCCCTAAGCTCAAT+GGG | + | tig0023943:78775-78794 | None:intergenic | 35.0% | |
| AAATTGATCCCTAAGCTCAA+TGG | + | tig0023943:78776-78795 | None:intergenic | 35.0% | |
| ATTGAGCTTAGGGATCAATT+TGG | - | tig0023943:78775-78794 | Msa1412760:intron | 35.0% | |
| CTTGTTTACAGAGCATATGT+TGG | - | tig0023943:78995-79014 | Msa1412760:CDS | 35.0% | |
| TATAGTACCAAAGATGTGTC+TGG | - | tig0023943:79040-79059 | Msa1412760:CDS | 35.0% | |
| TACAAATCCAGACACATCTT+TGG | + | tig0023943:79050-79069 | None:intergenic | 35.0% | |
| ! | CTGGATTTGTATCTAGAACA+TGG | - | tig0023943:79059-79078 | Msa1412760:CDS | 35.0% |
| ! | TCTAGAACATGGAACAACTA+TGG | - | tig0023943:79070-79089 | Msa1412760:intron | 35.0% |
| ATTGTCAAATTCGTAGCCAA+GGG | + | tig0023943:79229-79248 | None:intergenic | 35.0% | |
| GTAAAATCGTACGTGGAAAA+AGG | - | tig0023943:79343-79362 | Msa1412760:intron | 35.0% | |
| AATTCTAATAGCAGCCTCAA+AGG | + | tig0023943:79578-79597 | None:intergenic | 35.0% | |
| !!! | ATCTCTCCATGTCACTTTTT+AGG | + | tig0023943:79642-79661 | None:intergenic | 35.0% |
| TTCCAAGAGTTTCAAACCTA+GGG | + | tig0023943:79703-79722 | None:intergenic | 35.0% | |
| ATTCCAAGAGTTTCAAACCT+AGG | + | tig0023943:79704-79723 | None:intergenic | 35.0% | |
| AGTGTTAGAAATGTTGCAAG+CGG | - | tig0023943:79772-79791 | Msa1412760:intron | 35.0% | |
| ! | AACAACATATTGATGACAGG+TGG | - | tig0023943:79918-79937 | Msa1412760:exon | 35.0% |
| ! | ACAACATATTGATGACAGGT+GGG | - | tig0023943:79919-79938 | Msa1412760:exon | 35.0% |
| !! | GAGAAGCATTACCTGAAATA+TGG | - | tig0023943:79998-80017 | Msa1412760:intron | 35.0% |
| !! | GAGATTGGATCATTTGTTGT+TGG | + | tig0023943:80041-80060 | None:intergenic | 35.0% |
| ATCGAAGCAAAACTTATGCA+TGG | + | tig0023943:80083-80102 | None:intergenic | 35.0% | |
| ! | TAATTTTGTAATGGCCTCCA+TGG | - | tig0023943:80178-80197 | Msa1412760:intron | 35.0% |
| TTGCAATTGGCATCACAAAA+TGG | - | tig0023943:80227-80246 | Msa1412760:intron | 35.0% | |
| AGTATACCTTGCACAAACTA+GGG | + | tig0023943:80367-80386 | None:intergenic | 35.0% | |
| TAGTATACCTTGCACAAACT+AGG | + | tig0023943:80368-80387 | None:intergenic | 35.0% | |
| AATACCTGGACCTTAAACTA+TGG | + | tig0023943:78100-78119 | None:intergenic | 35.0% | |
| TTCCATTCCACCTTTCATTA+AGG | - | tig0023943:78144-78163 | Msa1412760:three_prime_UTR | 35.0% | |
| ATCAAGACCTTAATGAAAGG+TGG | + | tig0023943:78154-78173 | None:intergenic | 35.0% | |
| AGTAACGTTGTCCATCATTA+TGG | + | tig0023943:78219-78238 | None:intergenic | 35.0% | |
| !! | GTGTTGATCGCTTAGATTTT+TGG | - | tig0023943:78345-78364 | Msa1412760:three_prime_UTR | 35.0% |
| TAAGATCTCAAAACTTGCCT+TGG | - | tig0023943:78490-78509 | Msa1412760:CDS | 35.0% | |
| GATTCAAAGCTCTTTCAAGA+TGG | - | tig0023943:78561-78580 | Msa1412760:intron | 35.0% | |
| CTTTCAAGATGGATACTCAA+AGG | - | tig0023943:78572-78591 | Msa1412760:intron | 35.0% | |
| !! | AAATACGAGTGCTTGCTTTT+TGG | - | tig0023943:78607-78626 | Msa1412760:intron | 35.0% |
| !!! | TGCTTGCTTTTTGGTATGAA+TGG | - | tig0023943:78616-78635 | Msa1412760:intron | 35.0% |
| TTGATTATGGTTCCACATGT+TGG | - | tig0023943:78721-78740 | Msa1412760:CDS | 35.0% | |
| TATCTGTTGTTACCAACATG+TGG | + | tig0023943:78736-78755 | None:intergenic | 35.0% | |
| !! | CATGTTGGTAACAACAGATA+TGG | - | tig0023943:78736-78755 | Msa1412760:intron | 35.0% |
| AATTGATCCCTAAGCTCAAT+GGG | + | tig0023943:78775-78794 | None:intergenic | 35.0% | |
| AAATTGATCCCTAAGCTCAA+TGG | + | tig0023943:78776-78795 | None:intergenic | 35.0% | |
| ATTGAGCTTAGGGATCAATT+TGG | - | tig0023943:78775-78794 | Msa1412760:intron | 35.0% | |
| CTTGTTTACAGAGCATATGT+TGG | - | tig0023943:78995-79014 | Msa1412760:CDS | 35.0% | |
| TATAGTACCAAAGATGTGTC+TGG | - | tig0023943:79040-79059 | Msa1412760:CDS | 35.0% | |
| TACAAATCCAGACACATCTT+TGG | + | tig0023943:79050-79069 | None:intergenic | 35.0% | |
| ! | CTGGATTTGTATCTAGAACA+TGG | - | tig0023943:79059-79078 | Msa1412760:CDS | 35.0% |
| ! | TCTAGAACATGGAACAACTA+TGG | - | tig0023943:79070-79089 | Msa1412760:intron | 35.0% |
| ATTGTCAAATTCGTAGCCAA+GGG | + | tig0023943:79229-79248 | None:intergenic | 35.0% | |
| GTAAAATCGTACGTGGAAAA+AGG | - | tig0023943:79343-79362 | Msa1412760:intron | 35.0% | |
| AATTCTAATAGCAGCCTCAA+AGG | + | tig0023943:79578-79597 | None:intergenic | 35.0% | |
| !!! | ATCTCTCCATGTCACTTTTT+AGG | + | tig0023943:79642-79661 | None:intergenic | 35.0% |
| TTCCAAGAGTTTCAAACCTA+GGG | + | tig0023943:79703-79722 | None:intergenic | 35.0% | |
| ATTCCAAGAGTTTCAAACCT+AGG | + | tig0023943:79704-79723 | None:intergenic | 35.0% | |
| AGTGTTAGAAATGTTGCAAG+CGG | - | tig0023943:79772-79791 | Msa1412760:intron | 35.0% | |
| ! | AACAACATATTGATGACAGG+TGG | - | tig0023943:79918-79937 | Msa1412760:exon | 35.0% |
| ! | ACAACATATTGATGACAGGT+GGG | - | tig0023943:79919-79938 | Msa1412760:exon | 35.0% |
| !! | GAGAAGCATTACCTGAAATA+TGG | - | tig0023943:79998-80017 | Msa1412760:intron | 35.0% |
| !! | GAGATTGGATCATTTGTTGT+TGG | + | tig0023943:80041-80060 | None:intergenic | 35.0% |
| ATCGAAGCAAAACTTATGCA+TGG | + | tig0023943:80083-80102 | None:intergenic | 35.0% | |
| ! | TAATTTTGTAATGGCCTCCA+TGG | - | tig0023943:80178-80197 | Msa1412760:intron | 35.0% |
| TTGCAATTGGCATCACAAAA+TGG | - | tig0023943:80227-80246 | Msa1412760:intron | 35.0% | |
| AGTATACCTTGCACAAACTA+GGG | + | tig0023943:80367-80386 | None:intergenic | 35.0% | |
| TAGTATACCTTGCACAAACT+AGG | + | tig0023943:80368-80387 | None:intergenic | 35.0% | |
| ! | AACACCATAGTTTAAGGTCC+AGG | - | tig0023943:78093-78112 | Msa1412760:three_prime_UTR | 40.0% |
| GACCTTAATGAAAGGTGGAA+TGG | + | tig0023943:78149-78168 | None:intergenic | 40.0% | |
| ATGGATACTCAAAGGATTGC+TGG | - | tig0023943:78580-78599 | Msa1412760:intron | 40.0% | |
| GTATGTCGCAAGAACATACA+AGG | - | tig0023943:78797-78816 | Msa1412760:intron | 40.0% | |
| AACAACTATGGCAGGAATGA+AGG | - | tig0023943:79082-79101 | Msa1412760:intron | 40.0% | |
| ! | GGAATGAAGGTATGCAGATT+TGG | - | tig0023943:79095-79114 | Msa1412760:intron | 40.0% |
| CATTGTCAAATTCGTAGCCA+AGG | + | tig0023943:79230-79249 | None:intergenic | 40.0% | |
| GAGTTTCATGCTTATGTGCA+TGG | - | tig0023943:79252-79271 | Msa1412760:CDS | 40.0% | |
| ! | TCTGGCTTCAGTTTCTCATA+TGG | + | tig0023943:79285-79304 | None:intergenic | 40.0% |
| TGAAGCCAGATTTCGTGTTA+AGG | - | tig0023943:79295-79314 | Msa1412760:intron | 40.0% | |
| AGGTTCCTTAACACGAAATC+TGG | + | tig0023943:79303-79322 | None:intergenic | 40.0% | |
| !! | TTCGTTGGTAGGAGTTGATA+GGG | + | tig0023943:79531-79550 | None:intergenic | 40.0% |
| ! | ATTCGTTGGTAGGAGTTGAT+AGG | + | tig0023943:79532-79551 | None:intergenic | 40.0% |
| TCCAAGAGTTTCAAACCTAG+GGG | + | tig0023943:79702-79721 | None:intergenic | 40.0% | |
| TATGAATGCTGTTCAGAGCA+TGG | + | tig0023943:79972-79991 | None:intergenic | 40.0% | |
| AGCATTACCTGAAATATGGG+AGG | - | tig0023943:80002-80021 | Msa1412760:intron | 40.0% | |
| TCTTCAACCTCCCATATTTC+AGG | + | tig0023943:80012-80031 | None:intergenic | 40.0% | |
| AGATAGACAAAACTCTGCTG+AGG | + | tig0023943:80148-80167 | None:intergenic | 40.0% | |
| ACTCACCCAGTAATTTCGTT+CGG | + | tig0023943:80304-80323 | None:intergenic | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | tig0023943:80336-80355 | Msa1412760:intron | 40.0% |
| ! | AACACCATAGTTTAAGGTCC+AGG | - | tig0023943:78093-78112 | Msa1412760:three_prime_UTR | 40.0% |
| GACCTTAATGAAAGGTGGAA+TGG | + | tig0023943:78149-78168 | None:intergenic | 40.0% | |
| ATGGATACTCAAAGGATTGC+TGG | - | tig0023943:78580-78599 | Msa1412760:intron | 40.0% | |
| GTATGTCGCAAGAACATACA+AGG | - | tig0023943:78797-78816 | Msa1412760:intron | 40.0% | |
| AACAACTATGGCAGGAATGA+AGG | - | tig0023943:79082-79101 | Msa1412760:intron | 40.0% | |
| ! | GGAATGAAGGTATGCAGATT+TGG | - | tig0023943:79095-79114 | Msa1412760:intron | 40.0% |
| CATTGTCAAATTCGTAGCCA+AGG | + | tig0023943:79230-79249 | None:intergenic | 40.0% | |
| GAGTTTCATGCTTATGTGCA+TGG | - | tig0023943:79252-79271 | Msa1412760:CDS | 40.0% | |
| ! | TCTGGCTTCAGTTTCTCATA+TGG | + | tig0023943:79285-79304 | None:intergenic | 40.0% |
| TGAAGCCAGATTTCGTGTTA+AGG | - | tig0023943:79295-79314 | Msa1412760:intron | 40.0% | |
| AGGTTCCTTAACACGAAATC+TGG | + | tig0023943:79303-79322 | None:intergenic | 40.0% | |
| !! | TTCGTTGGTAGGAGTTGATA+GGG | + | tig0023943:79531-79550 | None:intergenic | 40.0% |
| ! | ATTCGTTGGTAGGAGTTGAT+AGG | + | tig0023943:79532-79551 | None:intergenic | 40.0% |
| TCCAAGAGTTTCAAACCTAG+GGG | + | tig0023943:79702-79721 | None:intergenic | 40.0% | |
| TATGAATGCTGTTCAGAGCA+TGG | + | tig0023943:79972-79991 | None:intergenic | 40.0% | |
| AGCATTACCTGAAATATGGG+AGG | - | tig0023943:80002-80021 | Msa1412760:intron | 40.0% | |
| TCTTCAACCTCCCATATTTC+AGG | + | tig0023943:80012-80031 | None:intergenic | 40.0% | |
| AGATAGACAAAACTCTGCTG+AGG | + | tig0023943:80148-80167 | None:intergenic | 40.0% | |
| ACTCACCCAGTAATTTCGTT+CGG | + | tig0023943:80304-80323 | None:intergenic | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | tig0023943:80336-80355 | Msa1412760:intron | 40.0% |
| ACTCTCTACCCATTGAGCTT+AGG | - | tig0023943:78764-78783 | Msa1412760:intron | 45.0% | |
| CTCTCTACCCATTGAGCTTA+GGG | - | tig0023943:78765-78784 | Msa1412760:intron | 45.0% | |
| GAACATGGAACAACTATGGC+AGG | - | tig0023943:79074-79093 | Msa1412760:intron | 45.0% | |
| ! | TACGATTTTACGCTGAGGCA+TGG | + | tig0023943:79334-79353 | None:intergenic | 45.0% |
| ! | TGGCTTGGAAGATTGCTTTG+AGG | - | tig0023943:79480-79499 | Msa1412760:CDS | 45.0% |
| GGCTTGGAAGATTGCTTTGA+GGG | - | tig0023943:79481-79500 | Msa1412760:CDS | 45.0% | |
| TTTGCAGAGGATTCGTTGGT+AGG | + | tig0023943:79542-79561 | None:intergenic | 45.0% | |
| ! | ATGGTTTGCAGAGGATTCGT+TGG | + | tig0023943:79546-79565 | None:intergenic | 45.0% |
| AATCCTCTGCAAACCATCTG+TGG | - | tig0023943:79549-79568 | Msa1412760:intron | 45.0% | |
| ! | ACCCCTAGGTTTGAAACTCT+TGG | - | tig0023943:79698-79717 | Msa1412760:CDS | 45.0% |
| CAAAACTTATGCATGGACCG+TGG | + | tig0023943:80076-80095 | None:intergenic | 45.0% | |
| ATTTAAGCACCACCATGCCA+TGG | + | tig0023943:80198-80217 | None:intergenic | 45.0% | |
| ACGTCTTAAAGAAAGCGACC+TGG | + | tig0023943:80332-80351 | None:intergenic | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | tig0023943:80406-80425 | None:intergenic | 45.0% |
| ACTCTCTACCCATTGAGCTT+AGG | - | tig0023943:78764-78783 | Msa1412760:intron | 45.0% | |
| CTCTCTACCCATTGAGCTTA+GGG | - | tig0023943:78765-78784 | Msa1412760:intron | 45.0% | |
| GAACATGGAACAACTATGGC+AGG | - | tig0023943:79074-79093 | Msa1412760:intron | 45.0% | |
| ! | TACGATTTTACGCTGAGGCA+TGG | + | tig0023943:79334-79353 | None:intergenic | 45.0% |
| ! | TGGCTTGGAAGATTGCTTTG+AGG | - | tig0023943:79480-79499 | Msa1412760:CDS | 45.0% |
| GGCTTGGAAGATTGCTTTGA+GGG | - | tig0023943:79481-79500 | Msa1412760:CDS | 45.0% | |
| TTTGCAGAGGATTCGTTGGT+AGG | + | tig0023943:79542-79561 | None:intergenic | 45.0% | |
| ! | ATGGTTTGCAGAGGATTCGT+TGG | + | tig0023943:79546-79565 | None:intergenic | 45.0% |
| AATCCTCTGCAAACCATCTG+TGG | - | tig0023943:79549-79568 | Msa1412760:intron | 45.0% | |
| ! | ACCCCTAGGTTTGAAACTCT+TGG | - | tig0023943:79698-79717 | Msa1412760:CDS | 45.0% |
| CAAAACTTATGCATGGACCG+TGG | + | tig0023943:80076-80095 | None:intergenic | 45.0% | |
| ATTTAAGCACCACCATGCCA+TGG | + | tig0023943:80198-80217 | None:intergenic | 45.0% | |
| ACGTCTTAAAGAAAGCGACC+TGG | + | tig0023943:80332-80351 | None:intergenic | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | tig0023943:80406-80425 | None:intergenic | 45.0% |
| CTTATTTCCTGTCAGGCCCT+TGG | - | tig0023943:79210-79229 | Msa1412760:CDS | 50.0% | |
| ! | CCACGTACGATTTTACGCTG+AGG | + | tig0023943:79339-79358 | None:intergenic | 50.0% |
| CCTCAGCGTAAAATCGTACG+TGG | - | tig0023943:79336-79355 | Msa1412760:intron | 50.0% | |
| ATGCGGTTGAAGTTCTCAGC+AGG | - | tig0023943:79455-79474 | Msa1412760:CDS | 50.0% | |
| GTTGAAGTTCTCAGCAGGCT+TGG | - | tig0023943:79460-79479 | Msa1412760:CDS | 50.0% | |
| ! | CTTCCACAGATGGTTTGCAG+AGG | + | tig0023943:79555-79574 | None:intergenic | 50.0% |
| ACCATCTGTGGAAGCCTTTG+AGG | - | tig0023943:79561-79580 | Msa1412760:intron | 50.0% | |
| GTTGCAAGCGGAAAAGTAGC+TGG | - | tig0023943:79784-79803 | Msa1412760:intron | 50.0% | |
| ! | TTGATGACAGGTGGGTCGAT+CGG | - | tig0023943:79927-79946 | Msa1412760:exon | 50.0% |
| TGGCTTCGACTGCAAGAGAT+TGG | + | tig0023943:80056-80075 | None:intergenic | 50.0% | |
| ATCTCTTGCAGTCGAAGCCA+CGG | - | tig0023943:80056-80075 | Msa1412760:intron | 50.0% | |
| TTGTAATGGCCTCCATGGCA+TGG | - | tig0023943:80183-80202 | Msa1412760:intron | 50.0% | |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | tig0023943:80358-80377 | Msa1412760:intron | 50.0% |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | tig0023943:80400-80419 | None:intergenic | 50.0% |
| CTTATTTCCTGTCAGGCCCT+TGG | - | tig0023943:79210-79229 | Msa1412760:CDS | 50.0% | |
| ! | CCACGTACGATTTTACGCTG+AGG | + | tig0023943:79339-79358 | None:intergenic | 50.0% |
| CCTCAGCGTAAAATCGTACG+TGG | - | tig0023943:79336-79355 | Msa1412760:intron | 50.0% | |
| ATGCGGTTGAAGTTCTCAGC+AGG | - | tig0023943:79455-79474 | Msa1412760:CDS | 50.0% | |
| GTTGAAGTTCTCAGCAGGCT+TGG | - | tig0023943:79460-79479 | Msa1412760:CDS | 50.0% | |
| ! | CTTCCACAGATGGTTTGCAG+AGG | + | tig0023943:79555-79574 | None:intergenic | 50.0% |
| ACCATCTGTGGAAGCCTTTG+AGG | - | tig0023943:79561-79580 | Msa1412760:intron | 50.0% | |
| GTTGCAAGCGGAAAAGTAGC+TGG | - | tig0023943:79784-79803 | Msa1412760:intron | 50.0% | |
| ! | TTGATGACAGGTGGGTCGAT+CGG | - | tig0023943:79927-79946 | Msa1412760:exon | 50.0% |
| TGGCTTCGACTGCAAGAGAT+TGG | + | tig0023943:80056-80075 | None:intergenic | 50.0% | |
| ATCTCTTGCAGTCGAAGCCA+CGG | - | tig0023943:80056-80075 | Msa1412760:intron | 50.0% | |
| TTGTAATGGCCTCCATGGCA+TGG | - | tig0023943:80183-80202 | Msa1412760:intron | 50.0% | |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | tig0023943:80358-80377 | Msa1412760:intron | 50.0% |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | tig0023943:80400-80419 | None:intergenic | 50.0% |
| GCTGAGGCATGGAAAGCAGA+AGG | + | tig0023943:79323-79342 | None:intergenic | 55.0% | |
| CAACGCAGATCACGCACATG+CGG | - | tig0023943:79438-79457 | Msa1412760:CDS | 55.0% | |
| AGTTCTCAGCAGGCTTGGCT+TGG | - | tig0023943:79465-79484 | Msa1412760:CDS | 55.0% | |
| GCCTCAAAGGCTTCCACAGA+TGG | + | tig0023943:79565-79584 | None:intergenic | 55.0% | |
| GGTCGATCGGATTTAGTGCC+TGG | - | tig0023943:79940-79959 | Msa1412760:intron | 55.0% | |
| TTCAGAGCATGGTCAGCACC+AGG | + | tig0023943:79961-79980 | None:intergenic | 55.0% | |
| TAATGGCCTCCATGGCATGG+TGG | - | tig0023943:80186-80205 | Msa1412760:intron | 55.0% | |
| TAAGCACCACCATGCCATGG+AGG | + | tig0023943:80195-80214 | None:intergenic | 55.0% | |
| TTACTGGGTGAGTCACGACC+AGG | - | tig0023943:80311-80330 | Msa1412760:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | tig0023943:80395-80414 | None:intergenic | 55.0% |
| GCTGAGGCATGGAAAGCAGA+AGG | + | tig0023943:79323-79342 | None:intergenic | 55.0% | |
| CAACGCAGATCACGCACATG+CGG | - | tig0023943:79438-79457 | Msa1412760:CDS | 55.0% | |
| AGTTCTCAGCAGGCTTGGCT+TGG | - | tig0023943:79465-79484 | Msa1412760:CDS | 55.0% | |
| GCCTCAAAGGCTTCCACAGA+TGG | + | tig0023943:79565-79584 | None:intergenic | 55.0% | |
| GGTCGATCGGATTTAGTGCC+TGG | - | tig0023943:79940-79959 | Msa1412760:intron | 55.0% | |
| TTCAGAGCATGGTCAGCACC+AGG | + | tig0023943:79961-79980 | None:intergenic | 55.0% | |
| TAATGGCCTCCATGGCATGG+TGG | - | tig0023943:80186-80205 | Msa1412760:intron | 55.0% | |
| TAAGCACCACCATGCCATGG+AGG | + | tig0023943:80195-80214 | None:intergenic | 55.0% | |
| TTACTGGGTGAGTCACGACC+AGG | - | tig0023943:80311-80330 | Msa1412760:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | tig0023943:80395-80414 | None:intergenic | 55.0% |
| TTCGTAGCCAAGGGCCTGAC+AGG | + | tig0023943:79220-79239 | None:intergenic | 60.0% | |
| CGCATGTGCGTGATCTGCGT+TGG | + | tig0023943:79440-79459 | None:intergenic | 60.0% | |
| CTATCAACCACGCCGTCTCC+AGG | - | tig0023943:80385-80404 | Msa1412760:intron | 60.0% | |
| TTCGTAGCCAAGGGCCTGAC+AGG | + | tig0023943:79220-79239 | None:intergenic | 60.0% | |
| CGCATGTGCGTGATCTGCGT+TGG | + | tig0023943:79440-79459 | None:intergenic | 60.0% | |
| CTATCAACCACGCCGTCTCC+AGG | - | tig0023943:80385-80404 | Msa1412760:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023943 | gene | 78076 | 80434 | 78076 | ID=Msa1412760;Name=Msa1412760 |
| tig0023943 | mRNA | 78076 | 80434 | 78076 | ID=Msa1412760-mRNA-1;Parent=Msa1412760;Name=Msa1412760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=57|1|1|1|0.71|0.75|8|345|249 |
| tig0023943 | exon | 78076 | 78573 | 78076 | ID=Msa1412760-mRNA-1:exon:20782;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 78688 | 78753 | 78688 | ID=Msa1412760-mRNA-1:exon:20781;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 78889 | 79080 | 78889 | ID=Msa1412760-mRNA-1:exon:20780;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 79160 | 79285 | 79160 | ID=Msa1412760-mRNA-1:exon:20779;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 79407 | 79504 | 79407 | ID=Msa1412760-mRNA-1:exon:20778;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 79692 | 79757 | 79692 | ID=Msa1412760-mRNA-1:exon:20777;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 79882 | 79948 | 79882 | ID=Msa1412760-mRNA-1:exon:20776;Parent=Msa1412760-mRNA-1 |
| tig0023943 | exon | 80396 | 80434 | 80396 | ID=Msa1412760-mRNA-1:exon:20775;Parent=Msa1412760-mRNA-1 |
| tig0023943 | five_prime_UTR | 80396 | 80434 | 80396 | ID=Msa1412760-mRNA-1:five_prime_utr;Parent=Msa1412760-mRNA-1 |
| tig0023943 | five_prime_UTR | 79931 | 79948 | 79931 | ID=Msa1412760-mRNA-1:five_prime_utr;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 79882 | 79930 | 79882 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 79692 | 79757 | 79692 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 79407 | 79504 | 79407 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 79160 | 79285 | 79160 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 78889 | 79080 | 78889 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 78688 | 78753 | 78688 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | CDS | 78421 | 78573 | 78421 | ID=Msa1412760-mRNA-1:cds;Parent=Msa1412760-mRNA-1 |
| tig0023943 | three_prime_UTR | 78076 | 78420 | 78076 | ID=Msa1412760-mRNA-1:three_prime_utr;Parent=Msa1412760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
