Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834270 | XP_003611325.1 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 6.01e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834270 | sp|Q9FGL2|TIP23_ARATH | 79.757 | 247 | 49 | 1 | 1 | 246 | 1 | 247 | 2.95e-136 | 386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834270 | G7JXC6 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 2.87e-163 | 461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0834270 | -0.803329 | 3.671643e-49 | -8.615850e-47 |
| Msa0006700 | Msa0834270 | -0.832796 | 7.705571e-56 | -8.615850e-47 |
| Msa0008850 | Msa0834270 | -0.801656 | 8.123469e-49 | -8.615850e-47 |
| Msa0012820 | Msa0834270 | 0.831334 | 1.770544e-55 | -8.615850e-47 |
| Msa0020630 | Msa0834270 | -0.829656 | 4.555821e-55 | -8.615850e-47 |
| Msa0034310 | Msa0834270 | 0.842016 | 3.344349e-58 | -8.615850e-47 |
| Msa0036230 | Msa0834270 | 0.823554 | 1.300883e-53 | -8.615850e-47 |
| Msa0036580 | Msa0834270 | 0.810073 | 1.381597e-50 | -8.615850e-47 |
| Msa0038310 | Msa0834270 | -0.806676 | 7.326888e-50 | -8.615850e-47 |
| Msa0043940 | Msa0834270 | -0.813140 | 2.976587e-51 | -8.615850e-47 |
| Msa0046240 | Msa0834270 | 0.811119 | 8.211640e-51 | -8.615850e-47 |
| Msa0048950 | Msa0834270 | 0.829247 | 5.727982e-55 | -8.615850e-47 |
| Msa0049400 | Msa0834270 | 0.804169 | 2.457556e-49 | -8.615850e-47 |
| Msa0051100 | Msa0834270 | -0.825028 | 5.859104e-54 | -8.615850e-47 |
| Msa0053900 | Msa0834270 | -0.815511 | 8.904205e-52 | -8.615850e-47 |
| Msa0055280 | Msa0834270 | -0.836403 | 9.550456e-57 | -8.615850e-47 |
| Msa0059880 | Msa0834270 | 0.817651 | 2.952409e-52 | -8.615850e-47 |
| Msa0061600 | Msa0834270 | 0.863868 | 1.830890e-64 | -8.615850e-47 |
| Msa0068410 | Msa0834270 | -0.816123 | 6.502642e-52 | -8.615850e-47 |
| Msa0072030 | Msa0834270 | 0.800955 | 1.130620e-48 | -8.615850e-47 |
| Msa0081310 | Msa0834270 | 0.836036 | 1.183655e-56 | -8.615850e-47 |
| Msa0084680 | Msa0834270 | -0.800158 | 1.642943e-48 | -8.615850e-47 |
| Msa0092710 | Msa0834270 | -0.808117 | 3.624877e-50 | -8.615850e-47 |
| Msa0099730 | Msa0834270 | -0.808828 | 2.557119e-50 | -8.615850e-47 |
| Msa0101060 | Msa0834270 | -0.835455 | 1.661635e-56 | -8.615850e-47 |
| Msa0106120 | Msa0834270 | 0.836545 | 8.788998e-57 | -8.615850e-47 |
| Msa0106130 | Msa0834270 | 0.856870 | 2.400863e-62 | -8.615850e-47 |
| Msa0603800 | Msa0834270 | 0.834973 | 2.198469e-56 | -8.615850e-47 |
| Msa0605460 | Msa0834270 | 0.875296 | 3.446738e-68 | -8.615850e-47 |
| Msa0605470 | Msa0834270 | 0.809319 | 2.007197e-50 | -8.615850e-47 |
| Msa0618520 | Msa0834270 | -0.805246 | 1.464755e-49 | -8.615850e-47 |
| Msa0620640 | Msa0834270 | -0.840564 | 8.058834e-58 | -8.615850e-47 |
| Msa0621770 | Msa0834270 | -0.803005 | 4.285017e-49 | -8.615850e-47 |
| Msa0621890 | Msa0834270 | -0.812601 | 3.906066e-51 | -8.615850e-47 |
| Msa0628100 | Msa0834270 | -0.832616 | 8.537924e-56 | -8.615850e-47 |
| Msa0645100 | Msa0834270 | 0.853224 | 2.752420e-61 | -8.615850e-47 |
| Msa0646040 | Msa0834270 | 0.896355 | 3.994481e-76 | -8.615850e-47 |
| Msa0650650 | Msa0834270 | -0.829074 | 6.309502e-55 | -8.615850e-47 |
| Msa0650740 | Msa0834270 | -0.825035 | 5.838016e-54 | -8.615850e-47 |
| Msa0655660 | Msa0834270 | 0.817205 | 3.719884e-52 | -8.615850e-47 |
| Msa0656270 | Msa0834270 | -0.811988 | 5.314502e-51 | -8.615850e-47 |
| Msa0665910 | Msa0834270 | 0.840158 | 1.029178e-57 | -8.615850e-47 |
| Msa0670220 | Msa0834270 | 0.842051 | 3.273730e-58 | -8.615850e-47 |
| Msa0682730 | Msa0834270 | 0.802222 | 6.216351e-49 | -8.615850e-47 |
| Msa0684590 | Msa0834270 | 0.842264 | 2.875500e-58 | -8.615850e-47 |
| Msa0684600 | Msa0834270 | 0.855325 | 6.803901e-62 | -8.615850e-47 |
| Msa0684720 | Msa0834270 | 0.822894 | 1.855018e-53 | -8.615850e-47 |
| Msa0700070 | Msa0834270 | -0.808267 | 3.368515e-50 | -8.615850e-47 |
| Msa0701770 | Msa0834270 | -0.833221 | 6.041955e-56 | -8.615850e-47 |
| Msa0714600 | Msa0834270 | -0.840609 | 7.846096e-58 | -8.615850e-47 |
| Msa0724050 | Msa0834270 | -0.808189 | 3.500313e-50 | -8.615850e-47 |
| Msa0728610 | Msa0834270 | 0.815253 | 1.016233e-51 | -8.615850e-47 |
| Msa0731710 | Msa0834270 | -0.833812 | 4.300953e-56 | -8.615850e-47 |
| Msa0735280 | Msa0834270 | 0.850870 | 1.283571e-60 | -8.615850e-47 |
| Msa0739570 | Msa0834270 | -0.815263 | 1.011216e-51 | -8.615850e-47 |
| Msa0763880 | Msa0834270 | -0.804425 | 2.173931e-49 | -8.615850e-47 |
| Msa0777250 | Msa0834270 | 0.814944 | 1.190265e-51 | -8.615850e-47 |
| Msa0782330 | Msa0834270 | -0.814174 | 1.761721e-51 | -8.615850e-47 |
| Msa0792790 | Msa0834270 | 0.820011 | 8.593131e-53 | -8.615850e-47 |
| Msa0796430 | Msa0834270 | 0.993630 | 4.345426e-201 | -8.615850e-47 |
| Msa0811000 | Msa0834270 | -0.836440 | 9.345386e-57 | -8.615850e-47 |
| Msa0828570 | Msa0834270 | -0.805414 | 1.350689e-49 | -8.615850e-47 |
| Msa0834270 | Msa0839130 | 0.811950 | 5.418633e-51 | -8.615850e-47 |
| Msa0834270 | Msa0860270 | -0.828128 | 1.068011e-54 | -8.615850e-47 |
| Msa0834270 | Msa0862020 | -0.821138 | 4.735946e-53 | -8.615850e-47 |
| Msa0834270 | Msa0883640 | 0.850064 | 2.161236e-60 | -8.615850e-47 |
| Msa0834270 | Msa0887070 | -0.800750 | 1.244735e-48 | -8.615850e-47 |
| Msa0834270 | Msa0903730 | -0.821758 | 3.405457e-53 | -8.615850e-47 |
| Msa0834270 | Msa0910570 | 0.802573 | 5.261493e-49 | -8.615850e-47 |
| Msa0834270 | Msa0910830 | 0.844900 | 5.675774e-59 | -8.615850e-47 |
| Msa0834270 | Msa0913550 | 0.803476 | 3.423929e-49 | -8.615850e-47 |
| Msa0834270 | Msa0926800 | -0.805317 | 1.415235e-49 | -8.615850e-47 |
| Msa0834270 | Msa0948050 | 0.816286 | 5.981888e-52 | -8.615850e-47 |
| Msa0834270 | Msa0951720 | -0.815301 | 9.917509e-52 | -8.615850e-47 |
| Msa0834270 | Msa0960090 | 0.850641 | 1.488891e-60 | -8.615850e-47 |
| Msa0834270 | Msa0967820 | 0.830992 | 2.148100e-55 | -8.615850e-47 |
| Msa0834270 | Msa0971880 | 0.803312 | 3.701551e-49 | -8.615850e-47 |
| Msa0834270 | Msa0973230 | -0.807649 | 4.559621e-50 | -8.615850e-47 |
| Msa0834270 | Msa0981010 | -0.865909 | 4.194800e-65 | -8.615850e-47 |
| Msa0834270 | Msa0985700 | 0.850242 | 1.927834e-60 | -8.615850e-47 |
| Msa0834270 | Msa1002040 | -0.811292 | 7.529095e-51 | -8.615850e-47 |
| Msa0834270 | Msa1002990 | 0.839138 | 1.895870e-57 | -8.615850e-47 |
| Msa0834270 | Msa1004210 | -0.800215 | 1.600290e-48 | -8.615850e-47 |
| Msa0834270 | Msa1006940 | 0.836782 | 7.646547e-57 | -8.615850e-47 |
| Msa0834270 | Msa1032350 | -0.810913 | 9.100828e-51 | -8.615850e-47 |
| Msa0834270 | Msa1037060 | 0.822618 | 2.150884e-53 | -8.615850e-47 |
| Msa0834270 | Msa1038320 | -0.817196 | 3.738023e-52 | -8.615850e-47 |
| Msa0834270 | Msa1072350 | -0.807670 | 4.512923e-50 | -8.615850e-47 |
| Msa0834270 | Msa1079610 | -0.813749 | 2.186051e-51 | -8.615850e-47 |
| Msa0834270 | Msa1081600 | -0.807151 | 5.813479e-50 | -8.615850e-47 |
| Msa0834270 | Msa1109890 | 0.838816 | 2.296759e-57 | -8.615850e-47 |
| Msa0834270 | Msa1112730 | 0.821934 | 3.100448e-53 | -8.615850e-47 |
| Msa0834270 | Msa1118140 | -0.807416 | 5.108458e-50 | -8.615850e-47 |
| Msa0834270 | Msa1132560 | 0.988093 | 1.094232e-172 | -8.615850e-47 |
| Msa0834270 | Msa1142860 | 0.810783 | 9.708045e-51 | -8.615850e-47 |
| Msa0834270 | Msa1164800 | 0.820857 | 5.494690e-53 | -8.615850e-47 |
| Msa0834270 | Msa1166370 | -0.802069 | 6.683714e-49 | -8.615850e-47 |
| Msa0834270 | Msa1171060 | 0.810923 | 9.051889e-51 | -8.615850e-47 |
| Msa0834270 | Msa1175600 | 0.815167 | 1.061846e-51 | -8.615850e-47 |
| Msa0834270 | Msa1178160 | -0.803893 | 2.805179e-49 | -8.615850e-47 |
| Msa0834270 | Msa1182830 | -0.814444 | 1.535858e-51 | -8.615850e-47 |
| Msa0834270 | Msa1207480 | 0.862050 | 6.667564e-64 | -8.615850e-47 |
| Msa0834270 | Msa1216600 | 0.839867 | 1.225319e-57 | -8.615850e-47 |
| Msa0834270 | Msa1217810 | -0.802289 | 6.019844e-49 | -8.615850e-47 |
| Msa0834270 | Msa1221570 | 0.803421 | 3.514713e-49 | -8.615850e-47 |
| Msa0834270 | Msa1222030 | 0.827808 | 1.274899e-54 | -8.615850e-47 |
| Msa0834270 | Msa1233650 | 0.802482 | 5.494957e-49 | -8.615850e-47 |
| Msa0834270 | Msa1238480 | -0.804686 | 1.917698e-49 | -8.615850e-47 |
| Msa0834270 | Msa1241820 | -0.801574 | 8.443783e-49 | -8.615850e-47 |
| Msa0834270 | Msa1258280 | -0.804149 | 2.481853e-49 | -8.615850e-47 |
| Msa0834270 | Msa1265960 | -0.807814 | 4.205114e-50 | -8.615850e-47 |
| Msa0834270 | Msa1269050 | 0.804766 | 1.845508e-49 | -8.615850e-47 |
| Msa0834270 | Msa1296870 | 0.808763 | 2.639488e-50 | -8.615850e-47 |
| Msa0834270 | Msa1298290 | -0.814010 | 1.915108e-51 | -8.615850e-47 |
| Msa0834270 | Msa1300610 | 0.802715 | 4.918596e-49 | -8.615850e-47 |
| Msa0834270 | Msa1306190 | -0.814215 | 1.725954e-51 | -8.615850e-47 |
| Msa0834270 | Msa1306200 | -0.853838 | 1.833751e-61 | -8.615850e-47 |
| Msa0834270 | Msa1314710 | 0.822895 | 1.853993e-53 | -8.615850e-47 |
| Msa0834270 | Msa1317710 | -0.808447 | 3.083651e-50 | -8.615850e-47 |
| Msa0834270 | Msa1323030 | 0.829864 | 4.053752e-55 | -8.615850e-47 |
| Msa0834270 | Msa1323160 | 0.881286 | 2.723337e-70 | -8.615850e-47 |
| Msa0834270 | Msa1335970 | 0.828350 | 9.441365e-55 | -8.615850e-47 |
| Msa0834270 | Msa1355260 | -0.805037 | 1.619692e-49 | -8.615850e-47 |
| Msa0834270 | Msa1357490 | 0.835833 | 1.333103e-56 | -8.615850e-47 |
| Msa0834270 | Msa1360380 | -0.804281 | 2.329435e-49 | -8.615850e-47 |
| Msa0834270 | Msa1361190 | -0.819687 | 1.019032e-52 | -8.615850e-47 |
| Msa0834270 | Msa1370930 | 0.807928 | 3.977569e-50 | -8.615850e-47 |
| Msa0834270 | Msa1380490 | 0.852805 | 3.627015e-61 | -8.615850e-47 |
| Msa0834270 | Msa1386260 | 0.820611 | 6.258924e-53 | -8.615850e-47 |
| Msa0834270 | Msa1393440 | 0.837573 | 4.800352e-57 | -8.615850e-47 |
| Msa0834270 | Msa1395690 | 0.827295 | 1.692468e-54 | -8.615850e-47 |
| Msa0834270 | Msa1399430 | -0.816360 | 5.756127e-52 | -8.615850e-47 |
| Msa0834270 | Msa1400700 | 0.804515 | 2.081313e-49 | -8.615850e-47 |
| Msa0834270 | Msa1412760 | 0.824612 | 7.343585e-54 | -8.615850e-47 |
| Msa0834270 | Msa1416470 | 0.838974 | 2.090403e-57 | -8.615850e-47 |
| Msa0834270 | Msa1418190 | 0.814549 | 1.456010e-51 | -8.615850e-47 |
| Msa0834270 | Msa1420020 | 0.822334 | 2.504657e-53 | -8.615850e-47 |
| Msa0834270 | Msa1425010 | -0.807706 | 4.434162e-50 | -8.615850e-47 |
| Msa0834270 | Msa1426420 | 0.843232 | 1.589970e-58 | -8.615850e-47 |
| Msa0834270 | Msa1431000 | -0.808795 | 2.598055e-50 | -8.615850e-47 |
| Msa0834270 | Msa1439120 | -0.819744 | 9.890701e-53 | -8.615850e-47 |
| Msa0834270 | Msa1440220 | -0.846357 | 2.285512e-59 | -8.615850e-47 |
| Msa0834270 | Msa1445900 | 0.812883 | 3.388327e-51 | -8.615850e-47 |
| Msa0834270 | Msa1449670 | 0.840077 | 1.080070e-57 | -8.615850e-47 |
| Msa0834270 | Msa1450020 | -0.844089 | 9.381273e-59 | -8.615850e-47 |
| Msa0834270 | Msa1455660 | -0.814456 | 1.526651e-51 | -8.615850e-47 |
| Msa0834270 | Msa1459610 | 0.803661 | 3.134413e-49 | -8.615850e-47 |
| Msa0834270 | Msa1460310 | 0.813122 | 3.003665e-51 | -8.615850e-47 |
| Msa0139270 | Msa0834270 | 0.804214 | 2.404719e-49 | -8.615850e-47 |
| Msa0139460 | Msa0834270 | 0.824771 | 6.737915e-54 | -8.615850e-47 |
| Msa0139720 | Msa0834270 | 0.988821 | 1.512114e-175 | -8.615850e-47 |
| Msa0147670 | Msa0834270 | 0.800507 | 1.395023e-48 | -8.615850e-47 |
| Msa0148360 | Msa0834270 | -0.819483 | 1.134360e-52 | -8.615850e-47 |
| Msa0152740 | Msa0834270 | 0.844989 | 5.371200e-59 | -8.615850e-47 |
| Msa0159750 | Msa0834270 | -0.827868 | 1.233037e-54 | -8.615850e-47 |
| Msa0164660 | Msa0834270 | -0.824157 | 9.397433e-54 | -8.615850e-47 |
| Msa0173620 | Msa0834270 | 0.841815 | 3.780618e-58 | -8.615850e-47 |
| Msa0176620 | Msa0834270 | 0.821263 | 4.431202e-53 | -8.615850e-47 |
| Msa0182640 | Msa0834270 | -0.825589 | 4.317991e-54 | -8.615850e-47 |
| Msa0197750 | Msa0834270 | 0.895832 | 6.586987e-76 | -8.615850e-47 |
| Msa0219210 | Msa0834270 | 0.813042 | 3.126440e-51 | -8.615850e-47 |
| Msa0374130 | Msa0834270 | 0.803767 | 2.978770e-49 | -8.615850e-47 |
| Msa0375080 | Msa0834270 | 0.809496 | 1.838483e-50 | -8.615850e-47 |
| Msa0389060 | Msa0834270 | -0.814768 | 1.301807e-51 | -8.615850e-47 |
| Msa0393900 | Msa0834270 | 0.803450 | 3.466806e-49 | -8.615850e-47 |
| Msa0401340 | Msa0834270 | -0.810201 | 1.296650e-50 | -8.615850e-47 |
| Msa0405660 | Msa0834270 | 0.803937 | 2.746049e-49 | -8.615850e-47 |
| Msa0418000 | Msa0834270 | -0.845695 | 3.459801e-59 | -8.615850e-47 |
| Msa0419620 | Msa0834270 | 0.809528 | 1.810080e-50 | -8.615850e-47 |
| Msa0419990 | Msa0834270 | -0.815832 | 7.552517e-52 | -8.615850e-47 |
| Msa0423680 | Msa0834270 | 0.884017 | 2.744689e-71 | -8.615850e-47 |
| Msa0427520 | Msa0834270 | 0.807381 | 5.196693e-50 | -8.615850e-47 |
| Msa0431520 | Msa0834270 | -0.805414 | 1.350433e-49 | -8.615850e-47 |
| Msa0431830 | Msa0834270 | -0.808022 | 3.798645e-50 | -8.615850e-47 |
| Msa0455260 | Msa0834270 | -0.800465 | 1.422926e-48 | -8.615850e-47 |
| Msa0465670 | Msa0834270 | 0.802853 | 4.607041e-49 | -8.615850e-47 |
| Msa0465930 | Msa0834270 | -0.806418 | 8.306830e-50 | -8.615850e-47 |
| Msa0465970 | Msa0834270 | -0.815096 | 1.101134e-51 | -8.615850e-47 |
| Msa0469550 | Msa0834270 | 0.848748 | 5.028443e-60 | -8.615850e-47 |
| Msa0470370 | Msa0834270 | 0.870210 | 1.733851e-66 | -8.615850e-47 |
| Msa0242260 | Msa0834270 | 0.804049 | 2.602554e-49 | -8.615850e-47 |
| Msa0242700 | Msa0834270 | 0.834454 | 2.968822e-56 | -8.615850e-47 |
| Msa0260180 | Msa0834270 | -0.800476 | 1.415794e-48 | -8.615850e-47 |
| Msa0264940 | Msa0834270 | 0.814110 | 1.819957e-51 | -8.615850e-47 |
| Msa0265580 | Msa0834270 | -0.806021 | 1.007060e-49 | -8.615850e-47 |
| Msa0266650 | Msa0834270 | 0.801061 | 1.075466e-48 | -8.615850e-47 |
| Msa0266740 | Msa0834270 | 0.813321 | 2.715526e-51 | -8.615850e-47 |
| Msa0277280 | Msa0834270 | 0.886777 | 2.545902e-72 | -8.615850e-47 |
| Msa0282170 | Msa0834270 | -0.842856 | 2.002965e-58 | -8.615850e-47 |
| Msa0288240 | Msa0834270 | -0.805551 | 1.264043e-49 | -8.615850e-47 |
| Msa0295980 | Msa0834270 | 0.803427 | 3.504982e-49 | -8.615850e-47 |
| Msa0298270 | Msa0834270 | 0.810028 | 1.412829e-50 | -8.615850e-47 |
| Msa0302990 | Msa0834270 | 0.813705 | 2.235999e-51 | -8.615850e-47 |
| Msa0306130 | Msa0834270 | -0.822103 | 2.832802e-53 | -8.615850e-47 |
| Msa0311810 | Msa0834270 | -0.814376 | 1.589879e-51 | -8.615850e-47 |
| Msa0331780 | Msa0834270 | -0.803606 | 3.216745e-49 | -8.615850e-47 |
| Msa0336630 | Msa0834270 | 0.809208 | 2.119535e-50 | -8.615850e-47 |
| Msa0354390 | Msa0834270 | -0.809546 | 1.793452e-50 | -8.615850e-47 |
| Msa0357380 | Msa0834270 | -0.807868 | 4.095414e-50 | -8.615850e-47 |
| Msa0511720 | Msa0834270 | 0.814398 | 1.572603e-51 | -8.615850e-47 |
| Msa0515260 | Msa0834270 | 0.851807 | 6.977782e-61 | -8.615850e-47 |
| Msa0530950 | Msa0834270 | -0.817093 | 3.942938e-52 | -8.615850e-47 |
| Msa0533520 | Msa0834270 | 0.801464 | 8.892183e-49 | -8.615850e-47 |
| Msa0546740 | Msa0834270 | -0.807079 | 6.022711e-50 | -8.615850e-47 |
| Msa0548760 | Msa0834270 | 0.803173 | 3.954903e-49 | -8.615850e-47 |
| Msa0548770 | Msa0834270 | 0.800853 | 1.185777e-48 | -8.615850e-47 |
| Msa0548820 | Msa0834270 | 0.810187 | 1.305569e-50 | -8.615850e-47 |
| Msa0548970 | Msa0834270 | 0.831148 | 1.967112e-55 | -8.615850e-47 |
| Msa0565490 | Msa0834270 | -0.803570 | 3.273855e-49 | -8.615850e-47 |
| Msa0568610 | Msa0834270 | -0.817498 | 3.196929e-52 | -8.615850e-47 |
| Msa0579340 | Msa0834270 | -0.828710 | 7.729761e-55 | -8.615850e-47 |
| Msa0599600 | Msa0834270 | 0.817382 | 3.394473e-52 | -8.615850e-47 |
| Msa0601920 | Msa0834270 | 0.806106 | 9.661212e-50 | -8.615850e-47 |
| Msa0602530 | Msa0834270 | 0.805134 | 1.545710e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834270 | MtrunA17_Chr5g0399341 | 98.780 | 246 | 3 | 0 | 1 | 246 | 1 | 246 | 5.53e-167 | 461 |
| Msa0834270 | MtrunA17_Chr8g0340161 | 78.313 | 249 | 52 | 2 | 1 | 248 | 1 | 248 | 1.68e-131 | 371 |
| Msa0834270 | MtrunA17_Chr2g0331261 | 76.230 | 244 | 57 | 1 | 4 | 246 | 5 | 248 | 1.60e-124 | 353 |
| Msa0834270 | MtrunA17_Chr4g0030861 | 62.832 | 226 | 81 | 2 | 24 | 246 | 26 | 251 | 1.92e-91 | 270 |
| Msa0834270 | MtrunA17_Chr7g0264961 | 62.449 | 245 | 91 | 1 | 3 | 246 | 5 | 249 | 4.81e-90 | 266 |
| Msa0834270 | MtrunA17_Chr1g0212671 | 55.061 | 247 | 108 | 2 | 3 | 247 | 5 | 250 | 1.26e-89 | 265 |
| Msa0834270 | MtrunA17_Chr1g0146161 | 54.812 | 239 | 103 | 3 | 1 | 238 | 1 | 235 | 2.70e-83 | 249 |
| Msa0834270 | MtrunA17_Chr7g0222791 | 54.878 | 246 | 110 | 1 | 3 | 247 | 5 | 250 | 9.28e-80 | 240 |
| Msa0834270 | MtrunA17_Chr1g0188771 | 50.833 | 240 | 117 | 1 | 3 | 241 | 5 | 244 | 1.21e-78 | 237 |
| Msa0834270 | MtrunA17_Chr1g0146171 | 52.610 | 249 | 110 | 5 | 1 | 246 | 1 | 244 | 1.24e-78 | 237 |
| Msa0834270 | MtrunA17_Chr6g0478191 | 53.333 | 240 | 111 | 1 | 3 | 241 | 5 | 244 | 2.83e-73 | 224 |
| Msa0834270 | MtrunA17_Chr4g0020781 | 48.990 | 198 | 99 | 2 | 44 | 240 | 4 | 200 | 4.24e-58 | 184 |
| Msa0834270 | MtrunA17_Chr5g0426131 | 38.866 | 247 | 133 | 8 | 8 | 248 | 26 | 260 | 3.78e-40 | 139 |
| Msa0834270 | MtrunA17_Chr2g0326621 | 38.153 | 249 | 134 | 7 | 9 | 238 | 28 | 275 | 1.40e-38 | 135 |
| Msa0834270 | MtrunA17_Chr7g0264111 | 39.301 | 229 | 122 | 5 | 19 | 231 | 39 | 266 | 6.01e-38 | 134 |
| Msa0834270 | MtrunA17_Chr4g0029071 | 37.712 | 236 | 130 | 5 | 19 | 238 | 39 | 273 | 3.18e-36 | 129 |
| Msa0834270 | MtrunA17_Chr3g0145671 | 39.631 | 217 | 116 | 5 | 19 | 223 | 37 | 250 | 5.58e-36 | 129 |
| Msa0834270 | MtrunA17_Chr1g0199731 | 37.991 | 229 | 125 | 5 | 19 | 231 | 39 | 266 | 1.61e-33 | 122 |
| Msa0834270 | MtrunA17_Chr3g0113211 | 35.398 | 226 | 130 | 5 | 19 | 231 | 55 | 277 | 4.72e-31 | 116 |
| Msa0834270 | MtrunA17_Chr5g0436701 | 35.841 | 226 | 129 | 5 | 19 | 231 | 55 | 277 | 2.64e-30 | 114 |
| Msa0834270 | MtrunA17_Chr5g0397391 | 37.168 | 226 | 126 | 6 | 19 | 231 | 52 | 274 | 3.79e-29 | 111 |
| Msa0834270 | MtrunA17_Chr8g0386961 | 36.283 | 226 | 128 | 7 | 19 | 231 | 52 | 274 | 9.04e-29 | 110 |
| Msa0834270 | MtrunA17_Chr4g0006001 | 36.889 | 225 | 127 | 6 | 19 | 231 | 56 | 277 | 9.50e-29 | 110 |
| Msa0834270 | MtrunA17_Chr2g0284611 | 35.874 | 223 | 131 | 7 | 3 | 223 | 24 | 236 | 3.62e-27 | 105 |
| Msa0834270 | MtrunA17_Chr3g0079421 | 36.170 | 235 | 136 | 7 | 15 | 247 | 22 | 244 | 4.57e-27 | 105 |
| Msa0834270 | MtrunA17_Chr2g0284591 | 33.921 | 227 | 139 | 6 | 3 | 228 | 22 | 238 | 2.68e-26 | 103 |
| Msa0834270 | MtrunA17_Chr2g0284631 | 34.167 | 240 | 141 | 8 | 14 | 249 | 86 | 312 | 5.09e-26 | 103 |
| Msa0834270 | MtrunA17_Chr7g0217331 | 34.272 | 213 | 133 | 3 | 19 | 231 | 37 | 242 | 7.41e-26 | 102 |
| Msa0834270 | MtrunA17_Chr8g0379901 | 32.068 | 237 | 144 | 6 | 14 | 246 | 34 | 257 | 8.45e-26 | 102 |
| Msa0834270 | MtrunA17_Chr5g0435051 | 33.610 | 241 | 141 | 7 | 14 | 248 | 35 | 262 | 1.08e-25 | 101 |
| Msa0834270 | MtrunA17_Chr2g0333771 | 35.749 | 207 | 114 | 5 | 23 | 223 | 84 | 277 | 2.03e-25 | 101 |
| Msa0834270 | MtrunA17_Chr4g0001221 | 35.122 | 205 | 118 | 4 | 23 | 223 | 79 | 272 | 4.14e-25 | 100 |
| Msa0834270 | MtrunA17_Chr8g0379911 | 32.365 | 241 | 149 | 5 | 10 | 246 | 26 | 256 | 8.79e-25 | 99.4 |
| Msa0834270 | MtrunA17_Chr4g0044201 | 33.621 | 232 | 128 | 7 | 18 | 246 | 34 | 242 | 9.84e-24 | 96.3 |
| Msa0834270 | MtrunA17_Chr1g0201331 | 36.792 | 212 | 114 | 6 | 23 | 228 | 78 | 275 | 4.19e-23 | 95.5 |
| Msa0834270 | MtrunA17_Chr2g0284581 | 31.739 | 230 | 146 | 7 | 18 | 246 | 37 | 256 | 9.94e-23 | 94.0 |
| Msa0834270 | MtrunA17_Chr2g0284601 | 33.491 | 212 | 132 | 6 | 36 | 246 | 5 | 208 | 3.59e-21 | 88.6 |
| Msa0834270 | MtrunA17_Chr1g0184541 | 33.491 | 212 | 129 | 6 | 19 | 228 | 62 | 263 | 7.50e-19 | 83.6 |
| Msa0834270 | MtrunA17_Chr6g0467461 | 37.607 | 117 | 53 | 3 | 127 | 242 | 3 | 100 | 4.24e-17 | 74.7 |
| Msa0834270 | MtrunA17_Chr4g0038591 | 32.129 | 249 | 137 | 8 | 11 | 237 | 43 | 281 | 1.23e-16 | 77.8 |
| Msa0834270 | MtrunA17_Chr8g0362451 | 39.604 | 101 | 41 | 3 | 143 | 242 | 8 | 89 | 8.00e-15 | 68.2 |
| Msa0834270 | MtrunA17_Chr4g0001121 | 45.000 | 60 | 33 | 0 | 164 | 223 | 6 | 65 | 1.53e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834270 | AT5G47450.1 | 79.757 | 247 | 49 | 1 | 1 | 246 | 1 | 247 | 3.00e-137 | 386 |
| Msa0834270 | AT4G17340.1 | 82.800 | 250 | 42 | 1 | 1 | 249 | 1 | 250 | 1.43e-133 | 377 |
| Msa0834270 | AT3G16240.1 | 76.639 | 244 | 56 | 1 | 1 | 243 | 1 | 244 | 1.74e-129 | 366 |
| Msa0834270 | AT3G26520.1 | 64.069 | 231 | 82 | 1 | 7 | 236 | 10 | 240 | 6.59e-99 | 289 |
| Msa0834270 | AT2G36830.1 | 61.538 | 247 | 94 | 1 | 3 | 248 | 5 | 251 | 2.61e-98 | 287 |
| Msa0834270 | AT4G01470.1 | 55.466 | 247 | 107 | 2 | 3 | 246 | 5 | 251 | 2.38e-88 | 262 |
| Msa0834270 | AT1G73190.1 | 53.909 | 243 | 106 | 2 | 5 | 241 | 10 | 252 | 3.19e-76 | 232 |
| Msa0834270 | AT1G17810.1 | 53.600 | 250 | 110 | 2 | 5 | 248 | 10 | 259 | 3.44e-76 | 232 |
| Msa0834270 | AT2G25810.1 | 54.000 | 250 | 110 | 3 | 1 | 249 | 1 | 246 | 5.59e-76 | 231 |
| Msa0834270 | AT3G47440.1 | 45.798 | 238 | 126 | 3 | 1 | 236 | 4 | 240 | 7.87e-66 | 205 |
| Msa0834270 | AT5G60660.1 | 38.865 | 229 | 123 | 6 | 19 | 231 | 39 | 266 | 5.04e-37 | 132 |
| Msa0834270 | AT2G37170.2 | 38.306 | 248 | 134 | 8 | 9 | 238 | 68 | 314 | 8.10e-37 | 132 |
| Msa0834270 | AT2G37170.1 | 38.095 | 252 | 137 | 8 | 9 | 242 | 25 | 275 | 8.84e-37 | 131 |
| Msa0834270 | AT2G37180.1 | 37.860 | 243 | 134 | 6 | 19 | 245 | 37 | 278 | 1.82e-36 | 130 |
| Msa0834270 | AT4G35100.1 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 5.00e-36 | 129 |
| Msa0834270 | AT4G35100.2 | 41.364 | 220 | 108 | 7 | 19 | 223 | 38 | 251 | 5.00e-36 | 129 |
| Msa0834270 | AT3G53420.1 | 39.419 | 241 | 127 | 7 | 19 | 242 | 39 | 277 | 8.16e-36 | 129 |
| Msa0834270 | AT3G53420.2 | 39.419 | 241 | 127 | 7 | 19 | 242 | 39 | 277 | 8.16e-36 | 129 |
| Msa0834270 | AT3G54820.1 | 36.145 | 249 | 133 | 7 | 19 | 243 | 38 | 284 | 1.75e-35 | 128 |
| Msa0834270 | AT2G39010.1 | 35.802 | 243 | 133 | 6 | 11 | 231 | 24 | 265 | 1.27e-34 | 125 |
| Msa0834270 | AT2G16850.1 | 39.631 | 217 | 116 | 5 | 19 | 223 | 36 | 249 | 1.46e-33 | 122 |
| Msa0834270 | AT4G00430.1 | 37.333 | 225 | 126 | 5 | 19 | 231 | 53 | 274 | 3.12e-30 | 114 |
| Msa0834270 | AT4G23400.1 | 36.889 | 225 | 127 | 5 | 19 | 231 | 53 | 274 | 3.81e-30 | 114 |
| Msa0834270 | AT3G61430.2 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 5.74e-30 | 113 |
| Msa0834270 | AT3G61430.1 | 36.444 | 225 | 128 | 5 | 19 | 231 | 52 | 273 | 5.74e-30 | 113 |
| Msa0834270 | AT1G52180.1 | 60.674 | 89 | 35 | 0 | 123 | 211 | 34 | 122 | 9.61e-30 | 108 |
| Msa0834270 | AT1G01620.1 | 36.889 | 225 | 127 | 5 | 19 | 231 | 52 | 273 | 1.09e-29 | 112 |
| Msa0834270 | AT2G45960.1 | 35.556 | 225 | 130 | 5 | 19 | 231 | 52 | 273 | 7.72e-29 | 110 |
| Msa0834270 | AT1G01620.2 | 39.153 | 189 | 102 | 4 | 55 | 231 | 14 | 201 | 1.07e-26 | 103 |
| Msa0834270 | AT4G18910.1 | 33.745 | 243 | 143 | 7 | 12 | 246 | 45 | 277 | 6.43e-26 | 103 |
| Msa0834270 | AT5G37810.1 | 33.913 | 230 | 139 | 6 | 19 | 246 | 43 | 261 | 9.33e-26 | 102 |
| Msa0834270 | AT1G80760.1 | 33.043 | 230 | 135 | 5 | 23 | 246 | 84 | 300 | 1.91e-25 | 102 |
| Msa0834270 | AT4G19030.1 | 32.099 | 243 | 147 | 6 | 12 | 246 | 48 | 280 | 2.08e-25 | 101 |
| Msa0834270 | AT5G37820.1 | 34.545 | 220 | 124 | 6 | 19 | 231 | 43 | 249 | 1.85e-24 | 99.0 |
| Msa0834270 | AT5G37820.2 | 33.333 | 231 | 139 | 6 | 19 | 246 | 79 | 297 | 3.25e-24 | 99.0 |
| Msa0834270 | AT3G06100.1 | 31.878 | 229 | 150 | 3 | 6 | 234 | 33 | 255 | 3.52e-24 | 98.2 |
| Msa0834270 | AT1G31885.1 | 32.653 | 245 | 141 | 5 | 5 | 232 | 20 | 257 | 4.41e-24 | 98.6 |
| Msa0834270 | AT3G06100.2 | 32.864 | 213 | 137 | 3 | 22 | 234 | 1 | 207 | 1.45e-22 | 92.8 |
| Msa0834270 | AT4G10380.1 | 32.895 | 228 | 132 | 6 | 6 | 223 | 59 | 275 | 2.19e-21 | 91.3 |
| Msa0834270 | AT1G31885.2 | 34.762 | 210 | 122 | 4 | 31 | 232 | 1 | 203 | 3.59e-21 | 89.7 |
| Msa0834270 | AT2G45960.2 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 6.17e-21 | 89.4 |
| Msa0834270 | AT2G45960.3 | 35.025 | 197 | 116 | 4 | 19 | 206 | 52 | 245 | 8.01e-21 | 89.7 |
| Msa0834270 | AT2G39010.2 | 32.222 | 180 | 106 | 4 | 11 | 175 | 24 | 202 | 2.77e-18 | 81.3 |
| Msa0834270 | AT2G34390.1 | 32.599 | 227 | 137 | 6 | 13 | 231 | 42 | 260 | 1.30e-17 | 80.5 |
| Msa0834270 | AT2G34390.2 | 33.028 | 218 | 130 | 6 | 22 | 231 | 9 | 218 | 1.11e-16 | 77.4 |
| Msa0834270 | AT3G06100.3 | 35.606 | 132 | 84 | 1 | 103 | 234 | 44 | 174 | 1.78e-15 | 72.8 |
| Msa0834270 | AT4G00430.2 | 34.783 | 161 | 97 | 3 | 19 | 174 | 53 | 210 | 5.81e-15 | 72.0 |
Find 109 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCTATCTTCACCATTT+TGG | 0.165967 | 5_4:+7273569 | None:intergenic |
| GGCTTGGCTGGGTTGATTTA+TGG | 0.208743 | 5_4:-7271724 | Msa0834270:CDS |
| TTTCAAGTAAATTGCCAAAA+TGG | 0.224680 | 5_4:-7273583 | Msa0834270:exon |
| TTGCTGATAACTGGATCTAT+TGG | 0.258320 | 5_4:-7271768 | Msa0834270:CDS |
| TCCTAACTGGTCTCTTCTAT+TGG | 0.261693 | 5_4:-7272423 | Msa0834270:CDS |
| ATTTATGGTGACGTCTTTAT+TGG | 0.274341 | 5_4:-7271709 | Msa0834270:CDS |
| CACAGCAGCTGACCCCAAAA+AGG | 0.277234 | 5_4:-7271923 | Msa0834270:CDS |
| TTGAACCCAGCTGTTACTTT+TGG | 0.284387 | 5_4:-7272472 | Msa0834270:CDS |
| GCTTGCTGTCATGAACCTTT+TGG | 0.293239 | 5_4:-7271596 | Msa0834270:three_prime_UTR |
| ACCATTGCACCGATTGCTAT+TGG | 0.294639 | 5_4:-7271889 | Msa0834270:CDS |
| GTGGAAACTTTGCTGATAAC+TGG | 0.301786 | 5_4:-7271777 | Msa0834270:CDS |
| TTTGAGATTATCATAACATT+TGG | 0.330146 | 5_4:-7271967 | Msa0834270:CDS |
| TCAAACACTAATCCAGCAAT+AGG | 0.335099 | 5_4:+7271985 | None:intergenic |
| ACCTGAGATGTTTGCTGCTA+TGG | 0.342340 | 5_4:+7272501 | None:intergenic |
| ATGAACCCGGCTCGCTCATT+CGG | 0.368228 | 5_4:-7271814 | Msa0834270:CDS |
| CCATTGCACCGATTGCTATT+GGG | 0.370396 | 5_4:-7271888 | Msa0834270:CDS |
| TATTGGGTTGGACCATTGAT+AGG | 0.371182 | 5_4:-7271751 | Msa0834270:CDS |
| TAATTAACGGAAGACTAATT+AGG | 0.371184 | 5_4:+7273620 | None:intergenic |
| TGCTGATAACTGGATCTATT+GGG | 0.375661 | 5_4:-7271767 | Msa0834270:CDS |
| AAAATGGTGAAGATAGGTTT+TGG | 0.375817 | 5_4:-7273567 | Msa0834270:CDS |
| CATGCATTTGCACTATTTGT+TGG | 0.376412 | 5_4:-7272529 | Msa0834270:CDS |
| TATGTTTCAGATGCTGGTGC+TGG | 0.377613 | 5_4:+7271676 | None:intergenic |
| TTGATAGGAGGAGGCTTGGC+TGG | 0.378621 | 5_4:-7271736 | Msa0834270:CDS |
| TATTGGATTGCCCAATTGCT+TGG | 0.382330 | 5_4:-7272406 | Msa0834270:CDS |
| AAGGGTGAGGGTGGTTAGTT+AGG | 0.388555 | 5_4:-7273830 | Msa0834270:five_prime_UTR |
| CAACGATGGAGCCAAGCAAT+TGG | 0.397490 | 5_4:+7272395 | None:intergenic |
| CCAACCCATGGAGTGGCTGC+TGG | 0.411983 | 5_4:-7272015 | Msa0834270:CDS |
| TAAGGGTATGTTTCAGATGC+TGG | 0.414974 | 5_4:+7271670 | None:intergenic |
| CTCTGATAAATAAGCCTTGA+GGG | 0.415032 | 5_4:+7273515 | None:intergenic |
| GGCAACATCACCATCCTAAC+TGG | 0.420270 | 5_4:-7272436 | Msa0834270:CDS |
| TAAAATTGAATCATGGTTGT+TGG | 0.422441 | 5_4:-7271649 | Msa0834270:three_prime_UTR |
| GCTGGACTGAACCCTATTGC+TGG | 0.425119 | 5_4:-7271997 | Msa0834270:CDS |
| ATGTTTCAGATGCTGGTGCT+GGG | 0.433498 | 5_4:+7271677 | None:intergenic |
| CAAAGGAATTAGCTAATTAA+CGG | 0.444117 | 5_4:+7273607 | None:intergenic |
| CTTGGATCCAGCGGGTTTAG+TGG | 0.446191 | 5_4:-7272566 | Msa0834270:CDS |
| TTCGGCCCAGCTGTGGTTAG+TGG | 0.448499 | 5_4:-7271796 | Msa0834270:CDS |
| TCAGTCCAGCAGCCACTCCA+TGG | 0.457656 | 5_4:+7272010 | None:intergenic |
| CTGGGCCGAATGAGCGAGCC+GGG | 0.457837 | 5_4:+7271809 | None:intergenic |
| ATTGCCAAAATGGTGAAGAT+AGG | 0.457933 | 5_4:-7273573 | Msa0834270:exon |
| ATTGCTATTGGGTTCGTTGT+CGG | 0.459779 | 5_4:-7271877 | Msa0834270:CDS |
| AAGTTTCCACTAACCACAGC+TGG | 0.477936 | 5_4:+7271790 | None:intergenic |
| GATTATCATAACATTTGGAT+TGG | 0.481301 | 5_4:-7271962 | Msa0834270:CDS |
| TGTTGCCCTTGCACCGTCCA+TGG | 0.481816 | 5_4:+7273766 | None:intergenic |
| GCTAATCCAAAAGTAACAGC+TGG | 0.483137 | 5_4:+7272466 | None:intergenic |
| TTCATTGAACCTCCACTGAA+TGG | 0.492137 | 5_4:+7271832 | None:intergenic |
| GCCATAGCAGCAAACATCTC+AGG | 0.493649 | 5_4:-7272502 | Msa0834270:CDS |
| AACGATGGAGCCAAGCAATT+GGG | 0.495370 | 5_4:+7272396 | None:intergenic |
| TGATAGGAGGAGGCTTGGCT+GGG | 0.495930 | 5_4:-7271735 | Msa0834270:CDS |
| TTGAAATAAAGAAAAGGGTG+AGG | 0.496455 | 5_4:-7273843 | Msa0834270:five_prime_UTR |
| ACCATTGATAGGAGGAGGCT+TGG | 0.499184 | 5_4:-7271740 | Msa0834270:CDS |
| ATACCCTTAAAATTGAATCA+TGG | 0.499958 | 5_4:-7271656 | Msa0834270:exon |
| TGCATAAGAATTCTTTGCCA+TGG | 0.501658 | 5_4:+7273681 | None:intergenic |
| CAAACACTAATCCAGCAATA+GGG | 0.503864 | 5_4:+7271986 | None:intergenic |
| TGAACAAGTTTAAGCTTGAA+AGG | 0.504042 | 5_4:+7271625 | None:intergenic |
| AAAATGTATATGATTGTGAA+AGG | 0.508605 | 5_4:+7273730 | None:intergenic |
| CACTAAACCCGCTGGATCCA+AGG | 0.511849 | 5_4:+7272567 | None:intergenic |
| GCCAAGCCTCCTCCTATCAA+TGG | 0.517459 | 5_4:+7271739 | None:intergenic |
| TCTAACATCAGATGCAGCCT+TGG | 0.521701 | 5_4:-7272584 | Msa0834270:CDS |
| CCCAATAGCAATCGGTGCAA+TGG | 0.522337 | 5_4:+7271888 | None:intergenic |
| GGCAATTTACTTGAAAACAA+AGG | 0.531006 | 5_4:+7273590 | None:intergenic |
| ATATGTCCATGGACGGTGCA+AGG | 0.535026 | 5_4:-7273772 | Msa0834270:five_prime_UTR |
| TGTATATGATTGTGAAAGGG+AGG | 0.536341 | 5_4:+7273734 | None:intergenic |
| GTTGGACCATTGATAGGAGG+AGG | 0.537767 | 5_4:-7271745 | Msa0834270:CDS |
| TTGCAGAGTGTTCCAACCCA+TGG | 0.540788 | 5_4:-7272027 | Msa0834270:intron |
| ATTTGCACTATTTGTTGGTG+TGG | 0.541154 | 5_4:-7272524 | Msa0834270:CDS |
| GCTGGGCCGAATGAGCGAGC+CGG | 0.544156 | 5_4:+7271808 | None:intergenic |
| CAGTGGAGGTTCAATGAACC+CGG | 0.550196 | 5_4:-7271827 | Msa0834270:CDS |
| CAGTCCAGCAGCCACTCCAT+GGG | 0.550781 | 5_4:+7272011 | None:intergenic |
| AAATGTATATGATTGTGAAA+GGG | 0.558417 | 5_4:+7273731 | None:intergenic |
| TACAATTTATTACAAGCAGC+GGG | 0.560033 | 5_4:+7271526 | None:intergenic |
| TGAACCTCCACTGAATGGAC+CGG | 0.561117 | 5_4:+7271837 | None:intergenic |
| CCAGCAGCCACTCCATGGGT+TGG | 0.562685 | 5_4:+7272015 | None:intergenic |
| TCCAATAGAAGAGACCAGTT+AGG | 0.566741 | 5_4:+7272422 | None:intergenic |
| ATTTAGCATTGCCTCCCTCA+AGG | 0.567116 | 5_4:-7273529 | Msa0834270:CDS |
| TCGCTCATTCGGCCCAGCTG+TGG | 0.568998 | 5_4:-7271803 | Msa0834270:CDS |
| TAATGCTTGATTATAATGCT+AGG | 0.569994 | 5_4:+7273806 | None:intergenic |
| ACAACGAACCCAATAGCAAT+CGG | 0.576808 | 5_4:+7271880 | None:intergenic |
| GATAACTGGATCTATTGGGT+TGG | 0.583637 | 5_4:-7271763 | Msa0834270:CDS |
| CCTTAGCGGTGACATAATTG+AGG | 0.583882 | 5_4:+7272362 | None:intergenic |
| CCTCAATTATGTCACCGCTA+AGG | 0.583887 | 5_4:-7272362 | Msa0834270:intron |
| TATGTCCATGGACGGTGCAA+GGG | 0.584097 | 5_4:-7273771 | Msa0834270:five_prime_UTR |
| TGAAATAAAGAAAAGGGTGA+GGG | 0.584837 | 5_4:-7273842 | Msa0834270:five_prime_UTR |
| GATGCAGCCTTGGATCCAGC+GGG | 0.590239 | 5_4:-7272574 | Msa0834270:CDS |
| TCTAACAACTCATATGTCCA+TGG | 0.591289 | 5_4:-7273783 | Msa0834270:five_prime_UTR |
| AATAAAGAAAAGGGTGAGGG+TGG | 0.594742 | 5_4:-7273839 | Msa0834270:five_prime_UTR |
| GCTACTGCCACTAAACCCGC+TGG | 0.595890 | 5_4:+7272559 | None:intergenic |
| GATGGTGATGTTGCCTCCAA+TGG | 0.596576 | 5_4:+7272444 | None:intergenic |
| ATAGAAGAGACCAGTTAGGA+TGG | 0.597084 | 5_4:+7272426 | None:intergenic |
| GGGTTTAGTGGCAGTAGCTG+TGG | 0.598717 | 5_4:-7272554 | Msa0834270:CDS |
| TTACAATTTATTACAAGCAG+CGG | 0.603382 | 5_4:+7271525 | None:intergenic |
| TGTTTCAGATGCTGGTGCTG+GGG | 0.605971 | 5_4:+7271678 | None:intergenic |
| TGGGTTGGACCATTGATAGG+AGG | 0.606483 | 5_4:-7271748 | Msa0834270:CDS |
| TTAGCCGCCGGTCCATTCAG+TGG | 0.614841 | 5_4:-7271844 | Msa0834270:CDS |
| TGGCAAAGAATTCTTATGCA+AGG | 0.616445 | 5_4:-7273678 | Msa0834270:five_prime_UTR |
| CTAATCCAAAAGTAACAGCT+GGG | 0.617109 | 5_4:+7272467 | None:intergenic |
| GCCGCCGGTCCATTCAGTGG+AGG | 0.622801 | 5_4:-7271841 | Msa0834270:CDS |
| GGAGCTAACATCTTAGCCGC+CGG | 0.625071 | 5_4:-7271856 | Msa0834270:CDS |
| AACTCTTCATATATATACCA+TGG | 0.629426 | 5_4:-7273698 | Msa0834270:five_prime_UTR |
| GAGGAGGAGACATGCAACGA+TGG | 0.629914 | 5_4:+7272381 | None:intergenic |
| GTATATGATTGTGAAAGGGA+GGG | 0.633698 | 5_4:+7273735 | None:intergenic |
| ACTCTGATAAATAAGCCTTG+AGG | 0.644736 | 5_4:+7273514 | None:intergenic |
| AGATGCAGCCTTGGATCCAG+CGG | 0.648942 | 5_4:-7272575 | Msa0834270:CDS |
| ACAACTCATATGTCCATGGA+CGG | 0.650006 | 5_4:-7273779 | Msa0834270:five_prime_UTR |
| ATAGCAGCAAACATCTCAGG+TGG | 0.653320 | 5_4:-7272499 | Msa0834270:CDS |
| AGTTTCCACTAACCACAGCT+GGG | 0.662001 | 5_4:+7271791 | None:intergenic |
| GAGTGTTCCAACCCATGGAG+TGG | 0.667041 | 5_4:-7272022 | Msa0834270:CDS |
| TAGCGGTGACATAATTGAGG+AGG | 0.669128 | 5_4:+7272365 | None:intergenic |
| ACCTCCACTGAATGGACCGG+CGG | 0.670839 | 5_4:+7271840 | None:intergenic |
| TGATAAATAAGCCTTGAGGG+AGG | 0.682523 | 5_4:+7273518 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTAATATATTATGT+TGG | - | chr5_4:7273303-7273322 | Msa0834270:intron | 10.0% |
| !! | CATATATTAATATATTATGT+TGG | - | chr5_4:7273303-7273322 | Msa0834270:intron | 10.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | - | chr5_4:7273030-7273049 | Msa0834270:intron | 15.0% |
| !! | TTCAATGATTTATTAATATG+TGG | + | chr5_4:7273257-7273276 | None:intergenic | 15.0% |
| !!! | AAAGTACATTACATAATTTT+AGG | - | chr5_4:7273030-7273049 | Msa0834270:intron | 15.0% |
| !! | TTCAATGATTTATTAATATG+TGG | + | chr5_4:7273257-7273276 | None:intergenic | 15.0% |
| !! | AAATGTATATGATTGTGAAA+GGG | + | chr5_4:7271633-7271652 | None:intergenic | 20.0% |
| !! | AAAATGTATATGATTGTGAA+AGG | + | chr5_4:7271634-7271653 | None:intergenic | 20.0% |
| !! | AAAATTATGCAAGAAATAAG+AGG | - | chr5_4:7272005-7272024 | Msa0834270:CDS | 20.0% |
| !!! | TCTATGAGATTTTCATAAAT+TGG | + | chr5_4:7272064-7272083 | None:intergenic | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | - | chr5_4:7272236-7272255 | Msa0834270:intron | 20.0% |
| !! | ACTACAATAAATTGCAATAT+TGG | - | chr5_4:7272338-7272357 | Msa0834270:intron | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | - | chr5_4:7272236-7272255 | Msa0834270:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | - | chr5_4:7272707-7272726 | Msa0834270:intron | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | - | chr5_4:7273394-7273413 | Msa0834270:intron | 20.0% |
| !! | AAAGAAAAAACAAAACCAAA+AGG | + | chr5_4:7273783-7273802 | None:intergenic | 20.0% |
| !! | AAATGTATATGATTGTGAAA+GGG | + | chr5_4:7271633-7271652 | None:intergenic | 20.0% |
| !! | AAAATGTATATGATTGTGAA+AGG | + | chr5_4:7271634-7271653 | None:intergenic | 20.0% |
| !! | AAAATTATGCAAGAAATAAG+AGG | - | chr5_4:7272005-7272024 | Msa0834270:CDS | 20.0% |
| !!! | TCTATGAGATTTTCATAAAT+TGG | + | chr5_4:7272064-7272083 | None:intergenic | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | - | chr5_4:7272236-7272255 | Msa0834270:intron | 20.0% |
| !! | ACTACAATAAATTGCAATAT+TGG | - | chr5_4:7272338-7272357 | Msa0834270:intron | 20.0% |
| !! | AAATGTTTGACAAATGATAA+CGG | - | chr5_4:7272236-7272255 | Msa0834270:intron | 20.0% |
| !! | ACTTCAATAAATTGCAATAT+TGG | - | chr5_4:7272707-7272726 | Msa0834270:intron | 20.0% |
| !!! | TTTGAGATTATCATAACATT+TGG | - | chr5_4:7273394-7273413 | Msa0834270:intron | 20.0% |
| !! | AAAGAAAAAACAAAACCAAA+AGG | + | chr5_4:7273783-7273802 | None:intergenic | 20.0% |
| ! | TAATGCTTGATTATAATGCT+AGG | + | chr5_4:7271558-7271577 | None:intergenic | 25.0% |
| ! | AACTCTTCATATATATACCA+TGG | - | chr5_4:7271663-7271682 | Msa0834270:exon | 25.0% |
| ! | TAATTAACGGAAGACTAATT+AGG | + | chr5_4:7271744-7271763 | None:intergenic | 25.0% |
| ! | CAAAGGAATTAGCTAATTAA+CGG | + | chr5_4:7271757-7271776 | None:intergenic | 25.0% |
| !! | TTTCAAGTAAATTGCCAAAA+TGG | - | chr5_4:7271778-7271797 | Msa0834270:CDS | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | - | chr5_4:7272363-7272382 | Msa0834270:CDS | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | - | chr5_4:7272363-7272382 | Msa0834270:CDS | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | + | chr5_4:7273016-7273035 | None:intergenic | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | - | chr5_4:7273036-7273055 | Msa0834270:intron | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | - | chr5_4:7273399-7273418 | Msa0834270:intron | 25.0% |
| ! | ATACCCTTAAAATTGAATCA+TGG | - | chr5_4:7273705-7273724 | Msa0834270:five_prime_UTR | 25.0% |
| !! | CAACCATGATTCAATTTTAA+GGG | + | chr5_4:7273711-7273730 | None:intergenic | 25.0% |
| !! | ACAACCATGATTCAATTTTA+AGG | + | chr5_4:7273712-7273731 | None:intergenic | 25.0% |
| ! | TAAAATTGAATCATGGTTGT+TGG | - | chr5_4:7273712-7273731 | Msa0834270:five_prime_UTR | 25.0% |
| ! | TTACAATTTATTACAAGCAG+CGG | + | chr5_4:7273839-7273858 | None:intergenic | 25.0% |
| ! | TAATGCTTGATTATAATGCT+AGG | + | chr5_4:7271558-7271577 | None:intergenic | 25.0% |
| ! | AACTCTTCATATATATACCA+TGG | - | chr5_4:7271663-7271682 | Msa0834270:exon | 25.0% |
| ! | TAATTAACGGAAGACTAATT+AGG | + | chr5_4:7271744-7271763 | None:intergenic | 25.0% |
| ! | CAAAGGAATTAGCTAATTAA+CGG | + | chr5_4:7271757-7271776 | None:intergenic | 25.0% |
| !! | TTTCAAGTAAATTGCCAAAA+TGG | - | chr5_4:7271778-7271797 | Msa0834270:CDS | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | - | chr5_4:7272363-7272382 | Msa0834270:CDS | 25.0% |
| ! | AAATATAAGCTTACATCAGA+TGG | - | chr5_4:7272363-7272382 | Msa0834270:CDS | 25.0% |
| !! | TACTTTTGAATATACCTTAG+CGG | + | chr5_4:7273016-7273035 | None:intergenic | 25.0% |
| !!! | CATTACATAATTTTAGGTTC+AGG | - | chr5_4:7273036-7273055 | Msa0834270:intron | 25.0% |
| ! | GATTATCATAACATTTGGAT+TGG | - | chr5_4:7273399-7273418 | Msa0834270:intron | 25.0% |
| ! | ATACCCTTAAAATTGAATCA+TGG | - | chr5_4:7273705-7273724 | Msa0834270:five_prime_UTR | 25.0% |
| !! | CAACCATGATTCAATTTTAA+GGG | + | chr5_4:7273711-7273730 | None:intergenic | 25.0% |
| !! | ACAACCATGATTCAATTTTA+AGG | + | chr5_4:7273712-7273731 | None:intergenic | 25.0% |
| ! | TAAAATTGAATCATGGTTGT+TGG | - | chr5_4:7273712-7273731 | Msa0834270:five_prime_UTR | 25.0% |
| ! | TTACAATTTATTACAAGCAG+CGG | + | chr5_4:7273839-7273858 | None:intergenic | 25.0% |
| TTGAAATAAAGAAAAGGGTG+AGG | - | chr5_4:7271518-7271537 | Msa0834270:three_prime_UTR | 30.0% | |
| TGAAATAAAGAAAAGGGTGA+GGG | - | chr5_4:7271519-7271538 | Msa0834270:three_prime_UTR | 30.0% | |
| GGCAATTTACTTGAAAACAA+AGG | + | chr5_4:7271774-7271793 | None:intergenic | 30.0% | |
| ! | AAAACCTATCTTCACCATTT+TGG | + | chr5_4:7271795-7271814 | None:intergenic | 30.0% |
| ! | AAAATGGTGAAGATAGGTTT+TGG | - | chr5_4:7271794-7271813 | Msa0834270:CDS | 30.0% |
| !! | AATAAGCTTTGTAGTTCTAG+AGG | - | chr5_4:7272028-7272047 | Msa0834270:intron | 30.0% |
| TTACGTGAGACAAAATTTGA+AGG | - | chr5_4:7272284-7272303 | Msa0834270:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | - | chr5_4:7272387-7272406 | Msa0834270:CDS | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | - | chr5_4:7272402-7272421 | Msa0834270:CDS | 30.0% | |
| !!! | TACATAATTTTAGGTTCAGG+TGG | - | chr5_4:7273039-7273058 | Msa0834270:intron | 30.0% |
| !!! | GGTTGATGACAAATTGTTTT+GGG | - | chr5_4:7273073-7273092 | Msa0834270:intron | 30.0% |
| AAATTGTTTCAGTCGAGATT+TGG | + | chr5_4:7273109-7273128 | None:intergenic | 30.0% | |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | + | chr5_4:7273187-7273206 | None:intergenic | 30.0% |
| ! | ATTTATGGTGACGTCTTTAT+TGG | - | chr5_4:7273652-7273671 | Msa0834270:five_prime_UTR | 30.0% |
| TGAACAAGTTTAAGCTTGAA+AGG | + | chr5_4:7273739-7273758 | None:intergenic | 30.0% | |
| TACAATTTATTACAAGCAGC+GGG | + | chr5_4:7273838-7273857 | None:intergenic | 30.0% | |
| TTGAAATAAAGAAAAGGGTG+AGG | - | chr5_4:7271518-7271537 | Msa0834270:three_prime_UTR | 30.0% | |
| TGAAATAAAGAAAAGGGTGA+GGG | - | chr5_4:7271519-7271538 | Msa0834270:three_prime_UTR | 30.0% | |
| GGCAATTTACTTGAAAACAA+AGG | + | chr5_4:7271774-7271793 | None:intergenic | 30.0% | |
| ! | AAAACCTATCTTCACCATTT+TGG | + | chr5_4:7271795-7271814 | None:intergenic | 30.0% |
| ! | AAAATGGTGAAGATAGGTTT+TGG | - | chr5_4:7271794-7271813 | Msa0834270:CDS | 30.0% |
| !! | AATAAGCTTTGTAGTTCTAG+AGG | - | chr5_4:7272028-7272047 | Msa0834270:intron | 30.0% |
| TTACGTGAGACAAAATTTGA+AGG | - | chr5_4:7272284-7272303 | Msa0834270:intron | 30.0% | |
| TGGTAACAATATTGGACTAT+TGG | - | chr5_4:7272387-7272406 | Msa0834270:CDS | 30.0% | |
| ACTATTGGTACAAATGTAGA+AGG | - | chr5_4:7272402-7272421 | Msa0834270:CDS | 30.0% | |
| !!! | TACATAATTTTAGGTTCAGG+TGG | - | chr5_4:7273039-7273058 | Msa0834270:intron | 30.0% |
| !!! | GGTTGATGACAAATTGTTTT+GGG | - | chr5_4:7273073-7273092 | Msa0834270:intron | 30.0% |
| AAATTGTTTCAGTCGAGATT+TGG | + | chr5_4:7273109-7273128 | None:intergenic | 30.0% | |
| !!! | TTTCATCCTCCAGTTTTAAA+TGG | + | chr5_4:7273187-7273206 | None:intergenic | 30.0% |
| ! | ATTTATGGTGACGTCTTTAT+TGG | - | chr5_4:7273652-7273671 | Msa0834270:five_prime_UTR | 30.0% |
| TGAACAAGTTTAAGCTTGAA+AGG | + | chr5_4:7273739-7273758 | None:intergenic | 30.0% | |
| TACAATTTATTACAAGCAGC+GGG | + | chr5_4:7273838-7273857 | None:intergenic | 30.0% | |
| TCTAACAACTCATATGTCCA+TGG | - | chr5_4:7271578-7271597 | Msa0834270:three_prime_UTR | 35.0% | |
| GTATATGATTGTGAAAGGGA+GGG | + | chr5_4:7271629-7271648 | None:intergenic | 35.0% | |
| TGTATATGATTGTGAAAGGG+AGG | + | chr5_4:7271630-7271649 | None:intergenic | 35.0% | |
| TGCATAAGAATTCTTTGCCA+TGG | + | chr5_4:7271683-7271702 | None:intergenic | 35.0% | |
| TGGCAAAGAATTCTTATGCA+AGG | - | chr5_4:7271683-7271702 | Msa0834270:CDS | 35.0% | |
| ATTGCCAAAATGGTGAAGAT+AGG | - | chr5_4:7271788-7271807 | Msa0834270:CDS | 35.0% | |
| CTCTGATAAATAAGCCTTGA+GGG | + | chr5_4:7271849-7271868 | None:intergenic | 35.0% | |
| ACTCTGATAAATAAGCCTTG+AGG | + | chr5_4:7271850-7271869 | None:intergenic | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | - | chr5_4:7272367-7272386 | Msa0834270:CDS | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | - | chr5_4:7272379-7272398 | Msa0834270:CDS | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | - | chr5_4:7272417-7272436 | Msa0834270:CDS | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | - | chr5_4:7272832-7272851 | Msa0834270:intron | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | - | chr5_4:7272837-7272856 | Msa0834270:intron | 35.0% |
| CTAATCCAAAAGTAACAGCT+GGG | + | chr5_4:7272897-7272916 | None:intergenic | 35.0% | |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | - | chr5_4:7272901-7272920 | Msa0834270:intron | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | - | chr5_4:7273046-7273065 | Msa0834270:intron | 35.0% |
| !!! | CGGTTGATGACAAATTGTTT+TGG | - | chr5_4:7273072-7273091 | Msa0834270:intron | 35.0% |
| TTAGTTGAACTCCTGAACAT+CGG | - | chr5_4:7273152-7273171 | Msa0834270:intron | 35.0% | |
| !!! | CTCCAGTTTTAAATGGAAAG+GGG | + | chr5_4:7273180-7273199 | None:intergenic | 35.0% |
| !!! | CCTCCAGTTTTAAATGGAAA+GGG | + | chr5_4:7273181-7273200 | None:intergenic | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | + | chr5_4:7273182-7273201 | None:intergenic | 35.0% |
| CAAACACTAATCCAGCAATA+GGG | + | chr5_4:7273378-7273397 | None:intergenic | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | + | chr5_4:7273379-7273398 | None:intergenic | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | - | chr5_4:7273593-7273612 | Msa0834270:five_prime_UTR | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | - | chr5_4:7273594-7273613 | Msa0834270:five_prime_UTR | 35.0% | |
| TCTAACAACTCATATGTCCA+TGG | - | chr5_4:7271578-7271597 | Msa0834270:three_prime_UTR | 35.0% | |
| GTATATGATTGTGAAAGGGA+GGG | + | chr5_4:7271629-7271648 | None:intergenic | 35.0% | |
| TGTATATGATTGTGAAAGGG+AGG | + | chr5_4:7271630-7271649 | None:intergenic | 35.0% | |
| TGCATAAGAATTCTTTGCCA+TGG | + | chr5_4:7271683-7271702 | None:intergenic | 35.0% | |
| TGGCAAAGAATTCTTATGCA+AGG | - | chr5_4:7271683-7271702 | Msa0834270:CDS | 35.0% | |
| ATTGCCAAAATGGTGAAGAT+AGG | - | chr5_4:7271788-7271807 | Msa0834270:CDS | 35.0% | |
| CTCTGATAAATAAGCCTTGA+GGG | + | chr5_4:7271849-7271868 | None:intergenic | 35.0% | |
| ACTCTGATAAATAAGCCTTG+AGG | + | chr5_4:7271850-7271869 | None:intergenic | 35.0% | |
| ATAAGCTTACATCAGATGGT+TGG | - | chr5_4:7272367-7272386 | Msa0834270:CDS | 35.0% | |
| !! | CAGATGGTTGGTAACAATAT+TGG | - | chr5_4:7272379-7272398 | Msa0834270:CDS | 35.0% |
| GTAGAAGGAATGATGAAATG+TGG | - | chr5_4:7272417-7272436 | Msa0834270:CDS | 35.0% | |
| CATGCATTTGCACTATTTGT+TGG | - | chr5_4:7272832-7272851 | Msa0834270:intron | 35.0% | |
| ! | ATTTGCACTATTTGTTGGTG+TGG | - | chr5_4:7272837-7272856 | Msa0834270:intron | 35.0% |
| CTAATCCAAAAGTAACAGCT+GGG | + | chr5_4:7272897-7272916 | None:intergenic | 35.0% | |
| !!! | GTTACTTTTGGATTAGCCAT+TGG | - | chr5_4:7272901-7272920 | Msa0834270:intron | 35.0% |
| !!! | TTTTAGGTTCAGGTGGTTAA+TGG | - | chr5_4:7273046-7273065 | Msa0834270:intron | 35.0% |
| !!! | CGGTTGATGACAAATTGTTT+TGG | - | chr5_4:7273072-7273091 | Msa0834270:intron | 35.0% |
| TTAGTTGAACTCCTGAACAT+CGG | - | chr5_4:7273152-7273171 | Msa0834270:intron | 35.0% | |
| !!! | CTCCAGTTTTAAATGGAAAG+GGG | + | chr5_4:7273180-7273199 | None:intergenic | 35.0% |
| !!! | CCTCCAGTTTTAAATGGAAA+GGG | + | chr5_4:7273181-7273200 | None:intergenic | 35.0% |
| !!! | TCCTCCAGTTTTAAATGGAA+AGG | + | chr5_4:7273182-7273201 | None:intergenic | 35.0% |
| CAAACACTAATCCAGCAATA+GGG | + | chr5_4:7273378-7273397 | None:intergenic | 35.0% | |
| TCAAACACTAATCCAGCAAT+AGG | + | chr5_4:7273379-7273398 | None:intergenic | 35.0% | |
| TTGCTGATAACTGGATCTAT+TGG | - | chr5_4:7273593-7273612 | Msa0834270:five_prime_UTR | 35.0% | |
| TGCTGATAACTGGATCTATT+GGG | - | chr5_4:7273594-7273613 | Msa0834270:five_prime_UTR | 35.0% | |
| AATAAAGAAAAGGGTGAGGG+TGG | - | chr5_4:7271522-7271541 | Msa0834270:three_prime_UTR | 40.0% | |
| ACAACTCATATGTCCATGGA+CGG | - | chr5_4:7271582-7271601 | Msa0834270:three_prime_UTR | 40.0% | |
| TGATAAATAAGCCTTGAGGG+AGG | + | chr5_4:7271846-7271865 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | + | chr5_4:7271879-7271898 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | - | chr5_4:7271878-7271897 | Msa0834270:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | - | chr5_4:7271884-7271903 | Msa0834270:CDS | 40.0% |
| AGACGTGACATAAATGAGGT+TGG | + | chr5_4:7272562-7272581 | None:intergenic | 40.0% | |
| ! | TCTGAGACGTGACATAAATG+AGG | + | chr5_4:7272566-7272585 | None:intergenic | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | - | chr5_4:7272889-7272908 | Msa0834270:intron | 40.0% |
| GCTAATCCAAAAGTAACAGC+TGG | + | chr5_4:7272898-7272917 | None:intergenic | 40.0% | |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | - | chr5_4:7272904-7272923 | Msa0834270:intron | 40.0% |
| ATAGAAGAGACCAGTTAGGA+TGG | + | chr5_4:7272938-7272957 | None:intergenic | 40.0% | |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | - | chr5_4:7272938-7272957 | Msa0834270:intron | 40.0% |
| TCCAATAGAAGAGACCAGTT+AGG | + | chr5_4:7272942-7272961 | None:intergenic | 40.0% | |
| TATTGGATTGCCCAATTGCT+TGG | - | chr5_4:7272955-7272974 | Msa0834270:intron | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | - | chr5_4:7273052-7273071 | Msa0834270:intron | 40.0% | |
| TAGTTGAACTCCTGAACATC+GGG | - | chr5_4:7273153-7273172 | Msa0834270:intron | 40.0% | |
| ! | GACCCCTTTCCATTTAAAAC+TGG | - | chr5_4:7273175-7273194 | Msa0834270:intron | 40.0% |
| ! | CCCTTTCCATTTAAAACTGG+AGG | - | chr5_4:7273178-7273197 | Msa0834270:intron | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | + | chr5_4:7273453-7273472 | None:intergenic | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | + | chr5_4:7273454-7273473 | None:intergenic | 40.0% |
| ACAACGAACCCAATAGCAAT+CGG | + | chr5_4:7273484-7273503 | None:intergenic | 40.0% | |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | - | chr5_4:7273484-7273503 | Msa0834270:CDS | 40.0% |
| TTCATTGAACCTCCACTGAA+TGG | + | chr5_4:7273532-7273551 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | - | chr5_4:7273584-7273603 | Msa0834270:exon | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | - | chr5_4:7273598-7273617 | Msa0834270:five_prime_UTR | 40.0% | |
| !! | TATTGGGTTGGACCATTGAT+AGG | - | chr5_4:7273610-7273629 | Msa0834270:five_prime_UTR | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | + | chr5_4:7273694-7273713 | None:intergenic | 40.0% |
| AATAAAGAAAAGGGTGAGGG+TGG | - | chr5_4:7271522-7271541 | Msa0834270:three_prime_UTR | 40.0% | |
| ACAACTCATATGTCCATGGA+CGG | - | chr5_4:7271582-7271601 | Msa0834270:three_prime_UTR | 40.0% | |
| TGATAAATAAGCCTTGAGGG+AGG | + | chr5_4:7271846-7271865 | None:intergenic | 40.0% | |
| AGCGAACACAAAAATCAGAG+TGG | + | chr5_4:7271879-7271898 | None:intergenic | 40.0% | |
| ! | ACTCTGATTTTTGTGTTCGC+TGG | - | chr5_4:7271878-7271897 | Msa0834270:CDS | 40.0% |
| ! | ATTTTTGTGTTCGCTGGAGT+TGG | - | chr5_4:7271884-7271903 | Msa0834270:CDS | 40.0% |
| AGACGTGACATAAATGAGGT+TGG | + | chr5_4:7272562-7272581 | None:intergenic | 40.0% | |
| ! | TCTGAGACGTGACATAAATG+AGG | + | chr5_4:7272566-7272585 | None:intergenic | 40.0% |
| !!! | TTGAACCCAGCTGTTACTTT+TGG | - | chr5_4:7272889-7272908 | Msa0834270:intron | 40.0% |
| GCTAATCCAAAAGTAACAGC+TGG | + | chr5_4:7272898-7272917 | None:intergenic | 40.0% | |
| !!! | ACTTTTGGATTAGCCATTGG+AGG | - | chr5_4:7272904-7272923 | Msa0834270:intron | 40.0% |
| ATAGAAGAGACCAGTTAGGA+TGG | + | chr5_4:7272938-7272957 | None:intergenic | 40.0% | |
| ! | TCCTAACTGGTCTCTTCTAT+TGG | - | chr5_4:7272938-7272957 | Msa0834270:intron | 40.0% |
| TCCAATAGAAGAGACCAGTT+AGG | + | chr5_4:7272942-7272961 | None:intergenic | 40.0% | |
| TATTGGATTGCCCAATTGCT+TGG | - | chr5_4:7272955-7272974 | Msa0834270:intron | 40.0% | |
| GTTCAGGTGGTTAATGGTTT+CGG | - | chr5_4:7273052-7273071 | Msa0834270:intron | 40.0% | |
| TAGTTGAACTCCTGAACATC+GGG | - | chr5_4:7273153-7273172 | Msa0834270:intron | 40.0% | |
| ! | GACCCCTTTCCATTTAAAAC+TGG | - | chr5_4:7273175-7273194 | Msa0834270:intron | 40.0% |
| ! | CCCTTTCCATTTAAAACTGG+AGG | - | chr5_4:7273178-7273197 | Msa0834270:intron | 40.0% |
| ! | TTCCAATTGAGCCCTTTTTG+GGG | + | chr5_4:7273453-7273472 | None:intergenic | 40.0% |
| ! | GTTCCAATTGAGCCCTTTTT+GGG | + | chr5_4:7273454-7273473 | None:intergenic | 40.0% |
| ACAACGAACCCAATAGCAAT+CGG | + | chr5_4:7273484-7273503 | None:intergenic | 40.0% | |
| ! | ATTGCTATTGGGTTCGTTGT+CGG | - | chr5_4:7273484-7273503 | Msa0834270:CDS | 40.0% |
| TTCATTGAACCTCCACTGAA+TGG | + | chr5_4:7273532-7273551 | None:intergenic | 40.0% | |
| GTGGAAACTTTGCTGATAAC+TGG | - | chr5_4:7273584-7273603 | Msa0834270:exon | 40.0% | |
| GATAACTGGATCTATTGGGT+TGG | - | chr5_4:7273598-7273617 | Msa0834270:five_prime_UTR | 40.0% | |
| !! | TATTGGGTTGGACCATTGAT+AGG | - | chr5_4:7273610-7273629 | Msa0834270:five_prime_UTR | 40.0% |
| ! | TAAGGGTATGTTTCAGATGC+TGG | + | chr5_4:7273694-7273713 | None:intergenic | 40.0% |
| ATTTAGCATTGCCTCCCTCA+AGG | - | chr5_4:7271832-7271851 | Msa0834270:CDS | 45.0% | |
| AGACGTGGCATAAATGAGGT+TGG | + | chr5_4:7272193-7272212 | None:intergenic | 45.0% | |
| ! | TCTGAGACGTGGCATAAATG+AGG | + | chr5_4:7272197-7272216 | None:intergenic | 45.0% |
| ! | AAACACACATGTCTGAGACG+TGG | + | chr5_4:7272208-7272227 | None:intergenic | 45.0% |
| TCTAACATCAGATGCAGCCT+TGG | - | chr5_4:7272777-7272796 | Msa0834270:intron | 45.0% | |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | + | chr5_4:7272863-7272882 | None:intergenic | 45.0% |
| ATAGCAGCAAACATCTCAGG+TGG | - | chr5_4:7272862-7272881 | Msa0834270:intron | 45.0% | |
| AACGATGGAGCCAAGCAATT+GGG | + | chr5_4:7272968-7272987 | None:intergenic | 45.0% | |
| TAGCGGTGACATAATTGAGG+AGG | + | chr5_4:7272999-7273018 | None:intergenic | 45.0% | |
| CCTTAGCGGTGACATAATTG+AGG | + | chr5_4:7273002-7273021 | None:intergenic | 45.0% | |
| CCTCAATTATGTCACCGCTA+AGG | - | chr5_4:7272999-7273018 | Msa0834270:intron | 45.0% | |
| !!! | AAATTGTTTTGGGAAGCCCG+AGG | - | chr5_4:7273083-7273102 | Msa0834270:intron | 45.0% |
| TTTCAGTCGAGATTTGGCCT+CGG | + | chr5_4:7273103-7273122 | None:intergenic | 45.0% | |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | + | chr5_4:7273455-7273474 | None:intergenic | 45.0% |
| !! | ACCATTGCACCGATTGCTAT+TGG | - | chr5_4:7273472-7273491 | Msa0834270:CDS | 45.0% |
| !! | CCATTGCACCGATTGCTATT+GGG | - | chr5_4:7273473-7273492 | Msa0834270:CDS | 45.0% |
| AGTTTCCACTAACCACAGCT+GGG | + | chr5_4:7273573-7273592 | None:intergenic | 45.0% | |
| AAGTTTCCACTAACCACAGC+TGG | + | chr5_4:7273574-7273593 | None:intergenic | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | + | chr5_4:7273687-7273706 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | + | chr5_4:7273688-7273707 | None:intergenic | 45.0% | |
| !!! | GCTTGCTGTCATGAACCTTT+TGG | - | chr5_4:7273765-7273784 | Msa0834270:five_prime_UTR | 45.0% |
| ATTTAGCATTGCCTCCCTCA+AGG | - | chr5_4:7271832-7271851 | Msa0834270:CDS | 45.0% | |
| AGACGTGGCATAAATGAGGT+TGG | + | chr5_4:7272193-7272212 | None:intergenic | 45.0% | |
| ! | TCTGAGACGTGGCATAAATG+AGG | + | chr5_4:7272197-7272216 | None:intergenic | 45.0% |
| ! | AAACACACATGTCTGAGACG+TGG | + | chr5_4:7272208-7272227 | None:intergenic | 45.0% |
| TCTAACATCAGATGCAGCCT+TGG | - | chr5_4:7272777-7272796 | Msa0834270:intron | 45.0% | |
| ! | ACCTGAGATGTTTGCTGCTA+TGG | + | chr5_4:7272863-7272882 | None:intergenic | 45.0% |
| ATAGCAGCAAACATCTCAGG+TGG | - | chr5_4:7272862-7272881 | Msa0834270:intron | 45.0% | |
| AACGATGGAGCCAAGCAATT+GGG | + | chr5_4:7272968-7272987 | None:intergenic | 45.0% | |
| TAGCGGTGACATAATTGAGG+AGG | + | chr5_4:7272999-7273018 | None:intergenic | 45.0% | |
| CCTTAGCGGTGACATAATTG+AGG | + | chr5_4:7273002-7273021 | None:intergenic | 45.0% | |
| CCTCAATTATGTCACCGCTA+AGG | - | chr5_4:7272999-7273018 | Msa0834270:intron | 45.0% | |
| !!! | AAATTGTTTTGGGAAGCCCG+AGG | - | chr5_4:7273083-7273102 | Msa0834270:intron | 45.0% |
| TTTCAGTCGAGATTTGGCCT+CGG | + | chr5_4:7273103-7273122 | None:intergenic | 45.0% | |
| ! | GGTTCCAATTGAGCCCTTTT+TGG | + | chr5_4:7273455-7273474 | None:intergenic | 45.0% |
| !! | ACCATTGCACCGATTGCTAT+TGG | - | chr5_4:7273472-7273491 | Msa0834270:CDS | 45.0% |
| !! | CCATTGCACCGATTGCTATT+GGG | - | chr5_4:7273473-7273492 | Msa0834270:CDS | 45.0% |
| AGTTTCCACTAACCACAGCT+GGG | + | chr5_4:7273573-7273592 | None:intergenic | 45.0% | |
| AAGTTTCCACTAACCACAGC+TGG | + | chr5_4:7273574-7273593 | None:intergenic | 45.0% | |
| ATGTTTCAGATGCTGGTGCT+GGG | + | chr5_4:7273687-7273706 | None:intergenic | 45.0% | |
| TATGTTTCAGATGCTGGTGC+TGG | + | chr5_4:7273688-7273707 | None:intergenic | 45.0% | |
| !!! | GCTTGCTGTCATGAACCTTT+TGG | - | chr5_4:7273765-7273784 | Msa0834270:five_prime_UTR | 45.0% |
| ! | AAGGGTGAGGGTGGTTAGTT+AGG | - | chr5_4:7271531-7271550 | Msa0834270:three_prime_UTR | 50.0% |
| ATATGTCCATGGACGGTGCA+AGG | - | chr5_4:7271589-7271608 | Msa0834270:three_prime_UTR | 50.0% | |
| TATGTCCATGGACGGTGCAA+GGG | - | chr5_4:7271590-7271609 | Msa0834270:three_prime_UTR | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | - | chr5_4:7272859-7272878 | Msa0834270:intron | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | + | chr5_4:7272920-7272939 | None:intergenic | 50.0% |
| GGCAACATCACCATCCTAAC+TGG | - | chr5_4:7272925-7272944 | Msa0834270:intron | 50.0% | |
| CAACGATGGAGCCAAGCAAT+TGG | + | chr5_4:7272969-7272988 | None:intergenic | 50.0% | |
| TTCAGTCGAGATTTGGCCTC+GGG | + | chr5_4:7273102-7273121 | None:intergenic | 50.0% | |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | - | chr5_4:7273334-7273353 | Msa0834270:intron | 50.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | - | chr5_4:7273439-7273458 | Msa0834270:intron | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | - | chr5_4:7273448-7273467 | Msa0834270:intron | 50.0% | |
| CCCAATAGCAATCGGTGCAA+TGG | + | chr5_4:7273476-7273495 | None:intergenic | 50.0% | |
| TGAACCTCCACTGAATGGAC+CGG | + | chr5_4:7273527-7273546 | None:intergenic | 50.0% | |
| CAGTGGAGGTTCAATGAACC+CGG | - | chr5_4:7273534-7273553 | Msa0834270:CDS | 50.0% | |
| ! | TGGGTTGGACCATTGATAGG+AGG | - | chr5_4:7273613-7273632 | Msa0834270:five_prime_UTR | 50.0% |
| GTTGGACCATTGATAGGAGG+AGG | - | chr5_4:7273616-7273635 | Msa0834270:five_prime_UTR | 50.0% | |
| ACCATTGATAGGAGGAGGCT+TGG | - | chr5_4:7273621-7273640 | Msa0834270:five_prime_UTR | 50.0% | |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | - | chr5_4:7273637-7273656 | Msa0834270:five_prime_UTR | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | + | chr5_4:7273686-7273705 | None:intergenic | 50.0% |
| ! | AAGGGTGAGGGTGGTTAGTT+AGG | - | chr5_4:7271531-7271550 | Msa0834270:three_prime_UTR | 50.0% |
| ATATGTCCATGGACGGTGCA+AGG | - | chr5_4:7271589-7271608 | Msa0834270:three_prime_UTR | 50.0% | |
| TATGTCCATGGACGGTGCAA+GGG | - | chr5_4:7271590-7271609 | Msa0834270:three_prime_UTR | 50.0% | |
| GCCATAGCAGCAAACATCTC+AGG | - | chr5_4:7272859-7272878 | Msa0834270:intron | 50.0% | |
| ! | GATGGTGATGTTGCCTCCAA+TGG | + | chr5_4:7272920-7272939 | None:intergenic | 50.0% |
| GGCAACATCACCATCCTAAC+TGG | - | chr5_4:7272925-7272944 | Msa0834270:intron | 50.0% | |
| CAACGATGGAGCCAAGCAAT+TGG | + | chr5_4:7272969-7272988 | None:intergenic | 50.0% | |
| TTCAGTCGAGATTTGGCCTC+GGG | + | chr5_4:7273102-7273121 | None:intergenic | 50.0% | |
| ! | TTGCAGAGTGTTCCAACCCA+TGG | - | chr5_4:7273334-7273353 | Msa0834270:intron | 50.0% |
| ACAGCAGCTGACCCCAAAAA+GGG | - | chr5_4:7273439-7273458 | Msa0834270:intron | 50.0% | |
| GACCCCAAAAAGGGCTCAAT+TGG | - | chr5_4:7273448-7273467 | Msa0834270:intron | 50.0% | |
| CCCAATAGCAATCGGTGCAA+TGG | + | chr5_4:7273476-7273495 | None:intergenic | 50.0% | |
| TGAACCTCCACTGAATGGAC+CGG | + | chr5_4:7273527-7273546 | None:intergenic | 50.0% | |
| CAGTGGAGGTTCAATGAACC+CGG | - | chr5_4:7273534-7273553 | Msa0834270:CDS | 50.0% | |
| ! | TGGGTTGGACCATTGATAGG+AGG | - | chr5_4:7273613-7273632 | Msa0834270:five_prime_UTR | 50.0% |
| GTTGGACCATTGATAGGAGG+AGG | - | chr5_4:7273616-7273635 | Msa0834270:five_prime_UTR | 50.0% | |
| ACCATTGATAGGAGGAGGCT+TGG | - | chr5_4:7273621-7273640 | Msa0834270:five_prime_UTR | 50.0% | |
| !! | GGCTTGGCTGGGTTGATTTA+TGG | - | chr5_4:7273637-7273656 | Msa0834270:five_prime_UTR | 50.0% |
| ! | TGTTTCAGATGCTGGTGCTG+GGG | + | chr5_4:7273686-7273705 | None:intergenic | 50.0% |
| AGATGCAGCCTTGGATCCAG+CGG | - | chr5_4:7272786-7272805 | Msa0834270:intron | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | + | chr5_4:7272797-7272816 | None:intergenic | 55.0% | |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | - | chr5_4:7272795-7272814 | Msa0834270:intron | 55.0% |
| GGGTTTAGTGGCAGTAGCTG+TGG | - | chr5_4:7272807-7272826 | Msa0834270:intron | 55.0% | |
| GAGGAGGAGACATGCAACGA+TGG | + | chr5_4:7272983-7273002 | None:intergenic | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | - | chr5_4:7273339-7273358 | Msa0834270:intron | 55.0% | |
| GCTGGACTGAACCCTATTGC+TGG | - | chr5_4:7273364-7273383 | Msa0834270:intron | 55.0% | |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | + | chr5_4:7273440-7273459 | None:intergenic | 55.0% |
| CACAGCAGCTGACCCCAAAA+AGG | - | chr5_4:7273438-7273457 | Msa0834270:intron | 55.0% | |
| GGAGCTAACATCTTAGCCGC+CGG | - | chr5_4:7273505-7273524 | Msa0834270:CDS | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+CGG | - | chr5_4:7273547-7273566 | Msa0834270:CDS | 55.0% |
| GCCAAGCCTCCTCCTATCAA+TGG | + | chr5_4:7273625-7273644 | None:intergenic | 55.0% | |
| TTGATAGGAGGAGGCTTGGC+TGG | - | chr5_4:7273625-7273644 | Msa0834270:five_prime_UTR | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | - | chr5_4:7273626-7273645 | Msa0834270:five_prime_UTR | 55.0% | |
| AGATGCAGCCTTGGATCCAG+CGG | - | chr5_4:7272786-7272805 | Msa0834270:intron | 55.0% | |
| CACTAAACCCGCTGGATCCA+AGG | + | chr5_4:7272797-7272816 | None:intergenic | 55.0% | |
| ! | CTTGGATCCAGCGGGTTTAG+TGG | - | chr5_4:7272795-7272814 | Msa0834270:intron | 55.0% |
| GGGTTTAGTGGCAGTAGCTG+TGG | - | chr5_4:7272807-7272826 | Msa0834270:intron | 55.0% | |
| GAGGAGGAGACATGCAACGA+TGG | + | chr5_4:7272983-7273002 | None:intergenic | 55.0% | |
| GAGTGTTCCAACCCATGGAG+TGG | - | chr5_4:7273339-7273358 | Msa0834270:intron | 55.0% | |
| GCTGGACTGAACCCTATTGC+TGG | - | chr5_4:7273364-7273383 | Msa0834270:intron | 55.0% | |
| !!! | CTTTTTGGGGTCAGCTGCTG+TGG | + | chr5_4:7273440-7273459 | None:intergenic | 55.0% |
| CACAGCAGCTGACCCCAAAA+AGG | - | chr5_4:7273438-7273457 | Msa0834270:intron | 55.0% | |
| GGAGCTAACATCTTAGCCGC+CGG | - | chr5_4:7273505-7273524 | Msa0834270:CDS | 55.0% | |
| ! | ATGAACCCGGCTCGCTCATT+CGG | - | chr5_4:7273547-7273566 | Msa0834270:CDS | 55.0% |
| GCCAAGCCTCCTCCTATCAA+TGG | + | chr5_4:7273625-7273644 | None:intergenic | 55.0% | |
| TTGATAGGAGGAGGCTTGGC+TGG | - | chr5_4:7273625-7273644 | Msa0834270:five_prime_UTR | 55.0% | |
| TGATAGGAGGAGGCTTGGCT+GGG | - | chr5_4:7273626-7273645 | Msa0834270:five_prime_UTR | 55.0% | |
| TGTTGCCCTTGCACCGTCCA+TGG | + | chr5_4:7271598-7271617 | None:intergenic | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | - | chr5_4:7272787-7272806 | Msa0834270:intron | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | + | chr5_4:7272805-7272824 | None:intergenic | 60.0% | |
| GGAAAGGGGTCCCGATGTTC+AGG | + | chr5_4:7273166-7273185 | None:intergenic | 60.0% | |
| CAGTCCAGCAGCCACTCCAT+GGG | + | chr5_4:7273353-7273372 | None:intergenic | 60.0% | |
| TCAGTCCAGCAGCCACTCCA+TGG | + | chr5_4:7273354-7273373 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | - | chr5_4:7273517-7273536 | Msa0834270:CDS | 60.0% | |
| ACCTCCACTGAATGGACCGG+CGG | + | chr5_4:7273524-7273543 | None:intergenic | 60.0% | |
| TTCGGCCCAGCTGTGGTTAG+TGG | - | chr5_4:7273565-7273584 | Msa0834270:CDS | 60.0% | |
| TGTTGCCCTTGCACCGTCCA+TGG | + | chr5_4:7271598-7271617 | None:intergenic | 60.0% | |
| GATGCAGCCTTGGATCCAGC+GGG | - | chr5_4:7272787-7272806 | Msa0834270:intron | 60.0% | |
| GCTACTGCCACTAAACCCGC+TGG | + | chr5_4:7272805-7272824 | None:intergenic | 60.0% | |
| GGAAAGGGGTCCCGATGTTC+AGG | + | chr5_4:7273166-7273185 | None:intergenic | 60.0% | |
| CAGTCCAGCAGCCACTCCAT+GGG | + | chr5_4:7273353-7273372 | None:intergenic | 60.0% | |
| TCAGTCCAGCAGCCACTCCA+TGG | + | chr5_4:7273354-7273373 | None:intergenic | 60.0% | |
| TTAGCCGCCGGTCCATTCAG+TGG | - | chr5_4:7273517-7273536 | Msa0834270:CDS | 60.0% | |
| ACCTCCACTGAATGGACCGG+CGG | + | chr5_4:7273524-7273543 | None:intergenic | 60.0% | |
| TTCGGCCCAGCTGTGGTTAG+TGG | - | chr5_4:7273565-7273584 | Msa0834270:CDS | 60.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | + | chr5_4:7273349-7273368 | None:intergenic | 65.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | - | chr5_4:7273346-7273365 | Msa0834270:intron | 65.0% | |
| TCGCTCATTCGGCCCAGCTG+TGG | - | chr5_4:7273558-7273577 | Msa0834270:CDS | 65.0% | |
| CCAGCAGCCACTCCATGGGT+TGG | + | chr5_4:7273349-7273368 | None:intergenic | 65.0% | |
| CCAACCCATGGAGTGGCTGC+TGG | - | chr5_4:7273346-7273365 | Msa0834270:intron | 65.0% | |
| TCGCTCATTCGGCCCAGCTG+TGG | - | chr5_4:7273558-7273577 | Msa0834270:CDS | 65.0% | |
| GCCGCCGGTCCATTCAGTGG+AGG | - | chr5_4:7273520-7273539 | Msa0834270:CDS | 70.0% | |
| CTGGGCCGAATGAGCGAGCC+GGG | + | chr5_4:7273555-7273574 | None:intergenic | 70.0% | |
| GCTGGGCCGAATGAGCGAGC+CGG | + | chr5_4:7273556-7273575 | None:intergenic | 70.0% | |
| GCCGCCGGTCCATTCAGTGG+AGG | - | chr5_4:7273520-7273539 | Msa0834270:CDS | 70.0% | |
| CTGGGCCGAATGAGCGAGCC+GGG | + | chr5_4:7273555-7273574 | None:intergenic | 70.0% | |
| GCTGGGCCGAATGAGCGAGC+CGG | + | chr5_4:7273556-7273575 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 7271518 | 7273865 | 7271518 | ID=Msa0834270;Name=Msa0834270 |
| chr5_4 | mRNA | 7271518 | 7273865 | 7271518 | ID=Msa0834270-mRNA-1;Parent=Msa0834270;Name=Msa0834270-mRNA-1;_AED=0.02;_eAED=0.02;_QI=279|1|1|1|1|1|3|151|249 |
| chr5_4 | exon | 7271518 | 7272043 | 7271518 | ID=Msa0834270-mRNA-1:exon:3226;Parent=Msa0834270-mRNA-1 |
| chr5_4 | exon | 7272363 | 7272610 | 7272363 | ID=Msa0834270-mRNA-1:exon:3225;Parent=Msa0834270-mRNA-1 |
| chr5_4 | exon | 7273460 | 7273865 | 7273460 | ID=Msa0834270-mRNA-1:exon:3224;Parent=Msa0834270-mRNA-1 |
| chr5_4 | five_prime_UTR | 7273587 | 7273865 | 7273587 | ID=Msa0834270-mRNA-1:five_prime_utr;Parent=Msa0834270-mRNA-1 |
| chr5_4 | CDS | 7273460 | 7273586 | 7273460 | ID=Msa0834270-mRNA-1:cds;Parent=Msa0834270-mRNA-1 |
| chr5_4 | CDS | 7272363 | 7272610 | 7272363 | ID=Msa0834270-mRNA-1:cds;Parent=Msa0834270-mRNA-1 |
| chr5_4 | CDS | 7271669 | 7272043 | 7271669 | ID=Msa0834270-mRNA-1:cds;Parent=Msa0834270-mRNA-1 |
| chr5_4 | three_prime_UTR | 7271518 | 7271668 | 7271518 | ID=Msa0834270-mRNA-1:three_prime_utr;Parent=Msa0834270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
