Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417150 | sp|Q9M022|AIRP2_ARATH | 48.523 | 237 | 83 | 4 | 10 | 207 | 1 | 237 | 1.26e-72 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417150 | A2Q4Q8 | 78.088 | 251 | 16 | 3 | 1 | 212 | 1 | 251 | 8.80e-132 | 380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086130 | Msa1417150 | 0.821333 | 4.268243e-53 | -8.615850e-47 |
| Msa1382160 | Msa1417150 | 0.806887 | 6.611102e-50 | -8.615850e-47 |
| Msa1417150 | Msa1444740 | 0.803186 | 3.931222e-49 | -8.615850e-47 |
| Msa0140650 | Msa1417150 | 0.804192 | 2.430804e-49 | -8.615850e-47 |
| Msa0191940 | Msa1417150 | 0.929673 | 4.956300e-93 | -8.615850e-47 |
| Msa0194950 | Msa1417150 | -0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa0234050 | Msa1417150 | 0.946078 | 9.156341e-105 | -8.615850e-47 |
| Msa0469990 | Msa1417150 | 0.807049 | 6.111856e-50 | -8.615850e-47 |
| Msa0477080 | Msa1417150 | 0.854903 | 9.026230e-62 | -8.615850e-47 |
| Msa1034150 | Msa1417150 | 0.805570 | 1.252397e-49 | -8.615850e-47 |
| Msa1058750 | Msa1417150 | 0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa1087850 | Msa1417150 | 0.931800 | 2.207011e-94 | -8.615850e-47 |
| Msa0295090 | Msa1417150 | 0.804161 | 2.467355e-49 | -8.615850e-47 |
| Msa0308270 | Msa1417150 | 0.931134 | 5.911567e-94 | -8.615850e-47 |
| Msa0315440 | Msa1417150 | -0.808536 | 2.951313e-50 | -8.615850e-47 |
| Msa1159840 | Msa1417150 | 0.818301 | 2.105689e-52 | -8.615850e-47 |
| Msa0493630 | Msa1417150 | 0.830079 | 3.593536e-55 | -8.615850e-47 |
| Msa0521430 | Msa1417150 | 0.818376 | 2.024327e-52 | -8.615850e-47 |
| Msa0548240 | Msa1417150 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0866950 | Msa1417150 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417150 | MtrunA17_Chr2g0281861 | 78.088 | 251 | 16 | 3 | 1 | 212 | 1 | 251 | 1.69e-135 | 380 |
| Msa1417150 | MtrunA17_Chr4g0047521 | 64.940 | 251 | 46 | 5 | 1 | 212 | 1 | 248 | 3.12e-104 | 300 |
| Msa1417150 | MtrunA17_Chr3g0104651 | 47.325 | 243 | 88 | 4 | 10 | 212 | 13 | 255 | 1.76e-71 | 218 |
| Msa1417150 | MtrunA17_Chr4g0006201 | 50.431 | 232 | 76 | 3 | 10 | 202 | 6 | 237 | 7.91e-71 | 216 |
| Msa1417150 | MtrunA17_Chr7g0242261 | 48.718 | 234 | 80 | 4 | 5 | 198 | 16 | 249 | 2.88e-65 | 202 |
| Msa1417150 | MtrunA17_Chr8g0376861 | 36.400 | 250 | 101 | 6 | 14 | 211 | 10 | 253 | 7.23e-42 | 142 |
| Msa1417150 | MtrunA17_Chr3g0123161 | 35.827 | 254 | 99 | 7 | 14 | 211 | 13 | 258 | 9.66e-38 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417150 | AT3G47160.1 | 51.037 | 241 | 77 | 4 | 13 | 212 | 5 | 245 | 1.66e-79 | 238 |
| Msa1417150 | AT3G47160.2 | 48.617 | 253 | 77 | 5 | 13 | 212 | 5 | 257 | 7.09e-76 | 229 |
| Msa1417150 | AT5G01520.1 | 48.523 | 237 | 83 | 4 | 10 | 207 | 1 | 237 | 1.28e-73 | 223 |
| Msa1417150 | AT5G58787.1 | 51.452 | 241 | 73 | 5 | 13 | 212 | 5 | 242 | 1.04e-70 | 216 |
| Msa1417150 | AT5G58787.2 | 50.885 | 226 | 82 | 7 | 13 | 212 | 5 | 227 | 3.01e-63 | 196 |
| Msa1417150 | AT3G47160.3 | 47.596 | 208 | 68 | 4 | 46 | 212 | 1 | 208 | 6.10e-61 | 189 |
| Msa1417150 | AT5G58787.3 | 47.619 | 210 | 81 | 7 | 29 | 212 | 2 | 208 | 1.81e-51 | 165 |
| Msa1417150 | AT5G01520.2 | 44.848 | 165 | 60 | 3 | 10 | 143 | 1 | 165 | 1.60e-43 | 144 |
| Msa1417150 | AT1G24440.1 | 38.367 | 245 | 102 | 7 | 13 | 211 | 9 | 250 | 1.21e-40 | 139 |
| Msa1417150 | AT1G13195.1 | 37.238 | 239 | 104 | 5 | 14 | 207 | 16 | 253 | 2.72e-40 | 138 |
| Msa1417150 | AT1G13195.2 | 43.624 | 149 | 73 | 3 | 69 | 207 | 68 | 215 | 1.05e-32 | 118 |
| Msa1417150 | AT1G24440.2 | 42.208 | 154 | 73 | 3 | 71 | 211 | 68 | 218 | 1.13e-32 | 117 |
Find 67 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGCCTCTTATGATATTA+AGG | 0.242881 | tig0024442:+76722 | Msa1417150:three_prime_UTR |
| CATATAATCTACCTTTATAT+TGG | 0.260470 | tig0024442:-76849 | None:intergenic |
| AAAGTCTGCATTCAACTATT+TGG | 0.271531 | tig0024442:-76879 | None:intergenic |
| GAGAGTCATAAGGATCAAAA+AGG | 0.298294 | tig0024442:-76441 | None:intergenic |
| AACTCAAGGCTGGAATCTTC+TGG | 0.300509 | tig0024442:-76597 | None:intergenic |
| TATAAACTTTGAATGTAATC+TGG | 0.341065 | tig0024442:+76531 | Msa1417150:three_prime_UTR |
| TGCAATCTTGCTGGAGCCCT+TGG | 0.344245 | tig0024442:+72883 | Msa1417150:CDS |
| TTGTTGTGGTTACTATTTCA+AGG | 0.358630 | tig0024442:+76900 | Msa1417150:three_prime_UTR |
| AAAAGAAATTTACAAGGTAT+TGG | 0.363016 | tig0024442:-71756 | None:intergenic |
| TTTAAGACTGTCACGACAAA+AGG | 0.370109 | tig0024442:-76287 | None:intergenic |
| TGTACATGAAAAGCCTTCTA+AGG | 0.378666 | tig0024442:-76387 | None:intergenic |
| AGAAGAGTGTGGAATATGTA+TGG | 0.390272 | tig0024442:+73513 | Msa1417150:CDS |
| GAGTAAACTCGGGCGATCTC+TGG | 0.395134 | tig0024442:+76311 | Msa1417150:CDS |
| AAAAGAAACAAGTGCGCTGC+TGG | 0.395977 | tig0024442:-72841 | None:intergenic |
| TGGACAGATTGCAATCTTGC+TGG | 0.408751 | tig0024442:+72874 | Msa1417150:intron |
| ACTATGAAACTTGTTGTTGT+TGG | 0.410368 | tig0024442:+71609 | Msa1417150:five_prime_UTR |
| TAGACTATGAACCAATATAA+AGG | 0.423597 | tig0024442:+76838 | Msa1417150:three_prime_UTR |
| TCTGGATATTCACCGATAGT+AGG | 0.429327 | tig0024442:+76329 | Msa1417150:CDS |
| TAACAAGAGAGAACCTTAGA+AGG | 0.432085 | tig0024442:+76374 | Msa1417150:CDS |
| AAGTGGTGGTTCTTCTTCCA+TGG | 0.437052 | tig0024442:+71682 | Msa1417150:CDS |
| CACAGAAATGTGTTCTTTGA+TGG | 0.446529 | tig0024442:+76487 | Msa1417150:three_prime_UTR |
| ATTCACCTTAATATCATAAG+AGG | 0.459611 | tig0024442:-76727 | None:intergenic |
| TTGTTGTAGTTATTGTTCCA+AGG | 0.471942 | tig0024442:+76936 | Msa1417150:three_prime_UTR |
| GTGTTCTTTGATGGGTGGTT+CGG | 0.474646 | tig0024442:+76496 | Msa1417150:three_prime_UTR |
| ATCTTTGATCATGAATGCAT+TGG | 0.478399 | tig0024442:+76782 | Msa1417150:three_prime_UTR |
| AGTTGGTCATGAAGTTGAAA+TGG | 0.483667 | tig0024442:+76627 | Msa1417150:three_prime_UTR |
| TGGTTCATAGTCTAAGTTGT+TGG | 0.484833 | tig0024442:-76829 | None:intergenic |
| TTAGAATTCTTAATAATCCA+AGG | 0.493296 | tig0024442:-72900 | None:intergenic |
| CAGTCTTAAAAGAGTAAACT+CGG | 0.499948 | tig0024442:+76300 | Msa1417150:CDS |
| TTAAGACTGTCACGACAAAA+GGG | 0.503150 | tig0024442:-76286 | None:intergenic |
| TGTTGTGGTTACTATTTCAA+GGG | 0.504413 | tig0024442:+76901 | Msa1417150:three_prime_UTR |
| TGTTGTAGTTATTGTTCCAA+GGG | 0.504529 | tig0024442:+76937 | Msa1417150:three_prime_UTR |
| GTGGTTCTTCTTCCATGGGA+AGG | 0.507770 | tig0024442:+71687 | Msa1417150:CDS |
| ATTAAGAATTCTAATTTACA+AGG | 0.511384 | tig0024442:+72909 | Msa1417150:CDS |
| TATCTTAAGTGAGAGTCATA+AGG | 0.513554 | tig0024442:-76451 | None:intergenic |
| GCCTTGAGTTTGCGATGAGT+TGG | 0.514298 | tig0024442:+76610 | Msa1417150:three_prime_UTR |
| ACTCATCGCAAACTCAAGGC+TGG | 0.525194 | tig0024442:-76607 | None:intergenic |
| TGAGGAAACATGTACATAAG+TGG | 0.527124 | tig0024442:+71665 | Msa1417150:exon |
| CTGGATATTCACCGATAGTA+GGG | 0.527934 | tig0024442:+76330 | Msa1417150:CDS |
| TCTTTGTTACAACTTGAAAG+AGG | 0.536875 | tig0024442:+73382 | Msa1417150:CDS |
| AAAACAGAAGGTTGTATGCA+TGG | 0.538430 | tig0024442:+73426 | Msa1417150:CDS |
| TTTGAAAGAGAAGAAGAGTG+TGG | 0.544267 | tig0024442:+73502 | Msa1417150:CDS |
| TTGATCATGAATGCATTGGA+TGG | 0.551447 | tig0024442:+76786 | Msa1417150:three_prime_UTR |
| GTCTACTATGTCCCTACTAT+CGG | 0.552253 | tig0024442:-76341 | None:intergenic |
| CACATGACATGGTTGCAGTT+AGG | 0.552857 | tig0024442:-73559 | None:intergenic |
| AGTGGTGGTTCTTCTTCCAT+GGG | 0.553651 | tig0024442:+71683 | Msa1417150:CDS |
| TCTTTGATGGGTGGTTCGGA+TGG | 0.557204 | tig0024442:+76500 | Msa1417150:three_prime_UTR |
| AGGGATTCTGGTATGATCAA+AGG | 0.560502 | tig0024442:-76421 | None:intergenic |
| AGCATTTCAGGCACATGACA+TGG | 0.568729 | tig0024442:-73570 | None:intergenic |
| TTCCTTAAAAGACCTTCCCA+TGG | 0.575494 | tig0024442:-71699 | None:intergenic |
| ACCAACTCATCGCAAACTCA+AGG | 0.575881 | tig0024442:-76611 | None:intergenic |
| CTGGAATCTTCTGGAAGACG+TGG | 0.580626 | tig0024442:-76588 | None:intergenic |
| AGATTGAATTACTTATCAAG+AGG | 0.589731 | tig0024442:+76689 | Msa1417150:three_prime_UTR |
| TAGAATTCTTAATAATCCAA+GGG | 0.590750 | tig0024442:-72899 | None:intergenic |
| CTTTCAAGTTGTAACAAAGA+CGG | 0.593343 | tig0024442:-73379 | None:intergenic |
| CACGCACCATCGTATTCCCT+CGG | 0.609698 | tig0024442:-72793 | None:intergenic |
| ACAGAAATGTGTTCTTTGAT+GGG | 0.615943 | tig0024442:+76488 | Msa1417150:three_prime_UTR |
| TAGTAGGGACATAGTAGACA+TGG | 0.618868 | tig0024442:+76345 | Msa1417150:CDS |
| TAAGTAATTCAATCTGTACA+AGG | 0.625817 | tig0024442:-76681 | None:intergenic |
| GAAATGTGTTCTTTGATGGG+TGG | 0.628752 | tig0024442:+76491 | Msa1417150:three_prime_UTR |
| TAAGACTGTCACGACAAAAG+GGG | 0.632510 | tig0024442:-76285 | None:intergenic |
| GTTGAATGCAGACTTTGTTG+TGG | 0.647394 | tig0024442:+76886 | Msa1417150:three_prime_UTR |
| GTATCGTAGAAGAGAAGACG+AGG | 0.670479 | tig0024442:+73453 | Msa1417150:CDS |
| AGAAGGTTGTATGCATGGAG+CGG | 0.676580 | tig0024442:+73431 | Msa1417150:CDS |
| GGAAACATGTACATAAGTGG+TGG | 0.683193 | tig0024442:+71668 | Msa1417150:exon |
| AGTCTTAAAAGAGTAAACTC+GGG | 0.691812 | tig0024442:+76301 | Msa1417150:CDS |
| AAGAGGTGTCACTGATGCTG+AGG | 0.697146 | tig0024442:+73399 | Msa1417150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAATTTTTATTATTTT+TGG | + | tig0024442:71869-71888 | Msa1417150:intron | 0.0% |
| !! | GTTAAAAAAAATTAAGATAA+AGG | - | tig0024442:73287-73306 | None:intergenic | 10.0% |
| !! | TCAATATTATTTATTACATA+TGG | + | tig0024442:74155-74174 | Msa1417150:intron | 10.0% |
| !!! | AACTTAAAATATTCTTTTTA+AGG | + | tig0024442:75913-75932 | Msa1417150:intron | 10.0% |
| !!! | ATCATGAGTTATTTTTATTT+TGG | + | tig0024442:71898-71917 | Msa1417150:intron | 15.0% |
| !!! | TTTATTTTGGAATTATTTTC+TGG | + | tig0024442:71911-71930 | Msa1417150:intron | 15.0% |
| !!! | TTATTTTGGAATTATTTTCT+GGG | + | tig0024442:71912-71931 | Msa1417150:intron | 15.0% |
| !!! | ATTTTTCTTTTCCATAAATA+TGG | + | tig0024442:71979-71998 | Msa1417150:intron | 15.0% |
| !! | TTATAACTTGATCATATAAT+TGG | + | tig0024442:72749-72768 | Msa1417150:intron | 15.0% |
| !! | TATAACTTGATCATATAATT+GGG | + | tig0024442:72750-72769 | Msa1417150:intron | 15.0% |
| !! | ATTAAGAATTCTAATTTACA+AGG | + | tig0024442:72909-72928 | Msa1417150:CDS | 15.0% |
| !! | TTATAAAAATAACTTAGACA+TGG | + | tig0024442:73154-73173 | Msa1417150:intron | 15.0% |
| !! | TTCAGAACTAAATTAATTTA+AGG | - | tig0024442:73778-73797 | None:intergenic | 15.0% |
| !! | GTAATAAATAATATTGAGAT+TGG | - | tig0024442:74152-74171 | None:intergenic | 15.0% |
| !!! | AAAATACGAATCTTTAAAAT+TGG | - | tig0024442:74232-74251 | None:intergenic | 15.0% |
| !! | GAAATCTAATAAACTTAATT+AGG | - | tig0024442:75190-75209 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTTTGATGCA+TGG | - | tig0024442:75357-75376 | None:intergenic | 15.0% |
| !! | AAAAAAATACATATTATCTG+TGG | + | tig0024442:75369-75388 | Msa1417150:intron | 15.0% |
| !! | AAAAAATACATATTATCTGT+GGG | + | tig0024442:75370-75389 | Msa1417150:intron | 15.0% |
| !!! | ACATTTTTTTTTTTTTTTGC+AGG | + | tig0024442:76242-76261 | Msa1417150:intron | 15.0% |
| !!! | AAAAGAAAAACAGTATTTTG+AGG | + | tig0024442:71647-71666 | Msa1417150:five_prime_UTR | 20.0% |
| !! | AAAAGAAATTTACAAGGTAT+TGG | - | tig0024442:71759-71778 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTTGTTTTCTTGA+AGG | + | tig0024442:71826-71845 | Msa1417150:intron | 20.0% |
| !!! | TTTTTAGTTGTTTTCTTGAA+GGG | + | tig0024442:71827-71846 | Msa1417150:intron | 20.0% |
| !!! | TATTTTGGAATTATTTTCTG+GGG | + | tig0024442:71913-71932 | Msa1417150:intron | 20.0% |
| !! | GAACCAAAAAAAAAAAATCA+GGG | - | tig0024442:71951-71970 | None:intergenic | 20.0% |
| !! | TGAACCAAAAAAAAAAAATC+AGG | - | tig0024442:71952-71971 | None:intergenic | 20.0% |
| !! | TAGAATTCTTAATAATCCAA+GGG | - | tig0024442:72902-72921 | None:intergenic | 20.0% |
| !! | TTAGAATTCTTAATAATCCA+AGG | - | tig0024442:72903-72922 | None:intergenic | 20.0% |
| !! | TAGCTTATATGAAAAAAGTT+TGG | + | tig0024442:73114-73133 | Msa1417150:intron | 20.0% |
| !! | CCATATAAAAAGAAATCATA+CGG | - | tig0024442:73739-73758 | None:intergenic | 20.0% |
| !! | AGATAAAGAAGAATTTAACA+TGG | - | tig0024442:74280-74299 | None:intergenic | 20.0% |
| !! | ACAATTCAAAACTAATGATT+TGG | - | tig0024442:74332-74351 | None:intergenic | 20.0% |
| !! | TATAATACCATTATGAAAGA+AGG | + | tig0024442:74535-74554 | Msa1417150:intron | 20.0% |
| !!! | GATATGAAATAGCTTTATAA+AGG | + | tig0024442:75085-75104 | Msa1417150:intron | 20.0% |
| !! | ATTAATTACTAATGAGAATC+AGG | + | tig0024442:75236-75255 | Msa1417150:intron | 20.0% |
| !! | AAAAATACATATTATCTGTG+GGG | + | tig0024442:75371-75390 | Msa1417150:intron | 20.0% |
| !!! | TTGGTATTTGTTTTATTGAT+CGG | + | tig0024442:75880-75899 | Msa1417150:intron | 20.0% |
| !! | TATAAACTTTGAATGTAATC+TGG | + | tig0024442:76531-76550 | Msa1417150:three_prime_UTR | 20.0% |
| !! | CATATAATCTACCTTTATAT+TGG | - | tig0024442:76852-76871 | None:intergenic | 20.0% |
| ! | GAAGGAAAAAGAAATTTACA+AGG | - | tig0024442:71765-71784 | None:intergenic | 25.0% |
| ! | GAGAATTGAAAGAAAAAAGA+AGG | - | tig0024442:71783-71802 | None:intergenic | 25.0% |
| !!! | AAGCCCTGATTTTTTTTTTT+TGG | + | tig0024442:71945-71964 | Msa1417150:intron | 25.0% |
| !! | TTTCTTTTCCATAAATATGG+TGG | + | tig0024442:71982-72001 | Msa1417150:intron | 25.0% |
| ! | TAAATTCACCACCATATTTA+TGG | - | tig0024442:71993-72012 | None:intergenic | 25.0% |
| ! | TTTATTTCACTGCAAATTCA+TGG | + | tig0024442:72009-72028 | Msa1417150:intron | 25.0% |
| ! | CAGTTATGAATAAATTCTTG+TGG | + | tig0024442:72108-72127 | Msa1417150:intron | 25.0% |
| !!! | ATTCTTGTGGAATTTTTCAA+TGG | + | tig0024442:72121-72140 | Msa1417150:intron | 25.0% |
| !!! | TTTGTTTTGTTTTGTGTGAA+TGG | + | tig0024442:72370-72389 | Msa1417150:intron | 25.0% |
| ! | ATAGATCAGGAAACAATAAT+TGG | - | tig0024442:72499-72518 | None:intergenic | 25.0% |
| ! | AATTATGTTAAGACTTTCGA+CGG | + | tig0024442:72676-72695 | Msa1417150:intron | 25.0% |
| ! | GAATTCTAATTTACAAGGTT+AGG | + | tig0024442:72914-72933 | Msa1417150:intron | 25.0% |
| !! | CATTATGAACTGAGAAATTT+TGG | + | tig0024442:72957-72976 | Msa1417150:intron | 25.0% |
| ! | ATGAAAGAAAAGCAAGTATT+AGG | + | tig0024442:73242-73261 | Msa1417150:intron | 25.0% |
| ! | TGAAAGAAAAGCAAGTATTA+GGG | + | tig0024442:73243-73262 | Msa1417150:intron | 25.0% |
| !!! | GTTTTAAGAAGTATGAAGTT+TGG | + | tig0024442:73660-73679 | Msa1417150:intron | 25.0% |
| !! | CCGTATGATTTCTTTTTATA+TGG | + | tig0024442:73736-73755 | Msa1417150:intron | 25.0% |
| ! | TCACATACATGATTCTATAT+AGG | + | tig0024442:73798-73817 | Msa1417150:intron | 25.0% |
| !! | TCGTAAGTCTTGTATTAATT+CGG | + | tig0024442:73852-73871 | Msa1417150:intron | 25.0% |
| !! | TTGTATTAATTCGGTTTGTT+TGG | + | tig0024442:73861-73880 | Msa1417150:intron | 25.0% |
| ! | ACTTAAAGATGCTCAAAAAA+TGG | + | tig0024442:74040-74059 | Msa1417150:intron | 25.0% |
| ! | CTTAAAGATGCTCAAAAAAT+GGG | + | tig0024442:74041-74060 | Msa1417150:intron | 25.0% |
| ! | ACAAGTATCAATATGAGATT+CGG | - | tig0024442:74082-74101 | None:intergenic | 25.0% |
| !!! | GAATCTTTAAAATTGGAGTT+GGG | - | tig0024442:74225-74244 | None:intergenic | 25.0% |
| !!! | ATCATTAGTTTTGAATTGTG+TGG | + | tig0024442:74333-74352 | Msa1417150:intron | 25.0% |
| ! | TAAGTATATATGTCATGCAT+AGG | - | tig0024442:74515-74534 | None:intergenic | 25.0% |
| ! | TCAAATCATGGTTTGAATTT+CGG | - | tig0024442:74931-74950 | None:intergenic | 25.0% |
| !!! | TTTTAAAATGGCTCAAATCA+TGG | - | tig0024442:74943-74962 | None:intergenic | 25.0% |
| ! | AAAGGTTATTAAAATCGAGT+TGG | - | tig0024442:75030-75049 | None:intergenic | 25.0% |
| !!! | AACTCGATTTTAATAACCTT+TGG | + | tig0024442:75029-75048 | Msa1417150:intron | 25.0% |
| ! | TGAGATTACAATGATTTGAA+AGG | + | tig0024442:75120-75139 | Msa1417150:intron | 25.0% |
| !!! | ATTTTCTTCTGGAACTATTA+CGG | + | tig0024442:75155-75174 | Msa1417150:intron | 25.0% |
| ! | TATATACATATTGTCTGAGT+GGG | + | tig0024442:75318-75337 | Msa1417150:intron | 25.0% |
| !!! | TTTTTTTTTGATGCATGGTA+GGG | - | tig0024442:75352-75371 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTGATGCATGGT+AGG | - | tig0024442:75353-75372 | None:intergenic | 25.0% |
| !! | GAGTTATTTATAGCCTTTTT+GGG | + | tig0024442:75472-75491 | Msa1417150:intron | 25.0% |
| ! | TGAATGATAAGTATTCTATG+TGG | + | tig0024442:75809-75828 | Msa1417150:intron | 25.0% |
| ! | TTAGGCTTTGCATATTATAT+TGG | + | tig0024442:75861-75880 | Msa1417150:intron | 25.0% |
| !!! | TTTTAATTATAGTGATGTCC+TGG | + | tig0024442:75938-75957 | Msa1417150:intron | 25.0% |
| ! | CAATGTTCATATATCTTATG+TGG | + | tig0024442:75970-75989 | Msa1417150:intron | 25.0% |
| ! | AAAACAAAGACATTTGAAAG+AGG | - | tig0024442:76007-76026 | None:intergenic | 25.0% |
| ! | TAAGTAATTCAATCTGTACA+AGG | - | tig0024442:76684-76703 | None:intergenic | 25.0% |
| ! | AGATTGAATTACTTATCAAG+AGG | + | tig0024442:76689-76708 | Msa1417150:three_prime_UTR | 25.0% |
| ! | ATTCACCTTAATATCATAAG+AGG | - | tig0024442:76730-76749 | None:intergenic | 25.0% |
| !!! | ATCAAAGATTTGTTTTAGGA+GGG | - | tig0024442:76771-76790 | None:intergenic | 25.0% |
| !!! | CATGATCAAAGATTTGTTTT+AGG | - | tig0024442:76775-76794 | None:intergenic | 25.0% |
| ! | TAGACTATGAACCAATATAA+AGG | + | tig0024442:76838-76857 | Msa1417150:three_prime_UTR | 25.0% |
| !! | ACTATGAAACTTGTTGTTGT+TGG | + | tig0024442:71609-71628 | Msa1417150:five_prime_UTR | 30.0% |
| AGTCAAAACTTAGACAACTT+TGG | + | tig0024442:72255-72274 | Msa1417150:intron | 30.0% | |
| !!! | ACTCAGATGGAGAATTTTTT+TGG | + | tig0024442:72299-72318 | Msa1417150:intron | 30.0% |
| !!! | ATTTTGTTTTCTCCACCTTA+TGG | + | tig0024442:72398-72417 | Msa1417150:intron | 30.0% |
| TGCAATGCATATTATAGATC+AGG | - | tig0024442:72512-72531 | None:intergenic | 30.0% | |
| !!! | TTTTTTCGCTCAATGTTTCA+AGG | + | tig0024442:72555-72574 | Msa1417150:intron | 30.0% |
| ATTATGTTAAGACTTTCGAC+GGG | + | tig0024442:72677-72696 | Msa1417150:intron | 30.0% | |
| !!! | TGTTTCTTTTTCTGGTTCAA+TGG | + | tig0024442:72854-72873 | Msa1417150:intron | 30.0% |
| ! | ATTTACAAGGTTAGGCATTT+TGG | + | tig0024442:72922-72941 | Msa1417150:intron | 30.0% |
| ACTTATTTGAGCTTACTTAC+TGG | + | tig0024442:72999-73018 | Msa1417150:intron | 30.0% | |
| ! | TTTTCTTTCATGTGTAGACA+TGG | - | tig0024442:73233-73252 | None:intergenic | 30.0% |
| ! | TGAAATTCTGTATTGATCAG+CGG | + | tig0024442:73348-73367 | Msa1417150:intron | 30.0% |
| !! | CTTTCAAGTTGTAACAAAGA+CGG | - | tig0024442:73382-73401 | None:intergenic | 30.0% |
| TCTTTGTTACAACTTGAAAG+AGG | + | tig0024442:73382-73401 | Msa1417150:CDS | 30.0% | |
| !!! | CATTCCTTATTTTACGATCA+TGG | + | tig0024442:73630-73649 | Msa1417150:intron | 30.0% |
| CTTATGCAAAATCTGAATGA+TGG | - | tig0024442:73920-73939 | None:intergenic | 30.0% | |
| TCATATATATGGTAAAGCAC+AGG | - | tig0024442:73960-73979 | None:intergenic | 30.0% | |
| TAAGTCATAGCTTAGAAACT+AGG | - | tig0024442:74025-74044 | None:intergenic | 30.0% | |
| !! | CGAATCTTTAAAATTGGAGT+TGG | - | tig0024442:74226-74245 | None:intergenic | 30.0% |
| TAAATGATGTGATCTGATGT+AGG | + | tig0024442:74251-74270 | Msa1417150:intron | 30.0% | |
| AAATGATGTGATCTGATGTA+GGG | + | tig0024442:74252-74271 | Msa1417150:intron | 30.0% | |
| CTTGAGATTCTTGATAAACT+TGG | + | tig0024442:74440-74459 | Msa1417150:intron | 30.0% | |
| CATTATGAAAGAAGGAAACA+GGG | + | tig0024442:74543-74562 | Msa1417150:intron | 30.0% | |
| AAAGAGGTTCTTCTTTACTT+AGG | + | tig0024442:75061-75080 | Msa1417150:intron | 30.0% | |
| !! | TGAAATAGCTTTATAAAGGC+CGG | + | tig0024442:75089-75108 | Msa1417150:intron | 30.0% |
| ! | AGAATCAGGCACAATATTTT+AGG | + | tig0024442:75250-75269 | Msa1417150:intron | 30.0% |
| ACAGAATCTAAATACAGTGT+TGG | - | tig0024442:75281-75300 | None:intergenic | 30.0% | |
| CTATATACATATTGTCTGAG+TGG | + | tig0024442:75317-75336 | Msa1417150:intron | 30.0% | |
| ATATACATATTGTCTGAGTG+GGG | + | tig0024442:75319-75338 | Msa1417150:intron | 30.0% | |
| !!! | TTTTTTTTGATGCATGGTAG+GGG | - | tig0024442:75351-75370 | None:intergenic | 30.0% |
| TGAGTACAATACTGAAACTA+GGG | + | tig0024442:75407-75426 | Msa1417150:intron | 30.0% | |
| ! | GGAGTTATTTATAGCCTTTT+TGG | + | tig0024442:75471-75490 | Msa1417150:intron | 30.0% |
| TTGTAGGATAATGCTCTAAT+TGG | + | tig0024442:75764-75783 | Msa1417150:intron | 30.0% | |
| CATACAGCTTTCAATTAAAC+AGG | - | tig0024442:76215-76234 | None:intergenic | 30.0% | |
| CAGTCTTAAAAGAGTAAACT+CGG | + | tig0024442:76300-76319 | Msa1417150:CDS | 30.0% | |
| AGTCTTAAAAGAGTAAACTC+GGG | + | tig0024442:76301-76320 | Msa1417150:CDS | 30.0% | |
| AGAGTCATAAGGATCAAAAA+GGG | - | tig0024442:76443-76462 | None:intergenic | 30.0% | |
| TATCTTAAGTGAGAGTCATA+AGG | - | tig0024442:76454-76473 | None:intergenic | 30.0% | |
| ACAGAAATGTGTTCTTTGAT+GGG | + | tig0024442:76488-76507 | Msa1417150:three_prime_UTR | 30.0% | |
| ATGTGCCTCTTATGATATTA+AGG | + | tig0024442:76722-76741 | Msa1417150:three_prime_UTR | 30.0% | |
| !!! | GATCAAAGATTTGTTTTAGG+AGG | - | tig0024442:76772-76791 | None:intergenic | 30.0% |
| ATCTTTGATCATGAATGCAT+TGG | + | tig0024442:76782-76801 | Msa1417150:three_prime_UTR | 30.0% | |
| AAAGTCTGCATTCAACTATT+TGG | - | tig0024442:76882-76901 | None:intergenic | 30.0% | |
| TTGTTGTGGTTACTATTTCA+AGG | + | tig0024442:76900-76919 | Msa1417150:three_prime_UTR | 30.0% | |
| TGTTGTGGTTACTATTTCAA+GGG | + | tig0024442:76901-76920 | Msa1417150:three_prime_UTR | 30.0% | |
| TGAGGAAACATGTACATAAG+TGG | + | tig0024442:71665-71684 | Msa1417150:exon | 35.0% | |
| ! | TCACTGCAAATTCATGGTTT+TGG | + | tig0024442:72015-72034 | Msa1417150:intron | 35.0% |
| ACTCATCAAGAAAAAGTTGC+TGG | - | tig0024442:72722-72741 | None:intergenic | 35.0% | |
| ATCATATAATTGGGCGTGTA+GGG | + | tig0024442:72759-72778 | Msa1417150:intron | 35.0% | |
| !!! | AGGTTAGGCATTTTGGTTTT+TGG | + | tig0024442:72929-72948 | Msa1417150:intron | 35.0% |
| ! | CTAAATTTTCCTCATGCTGT+AGG | + | tig0024442:73186-73205 | Msa1417150:intron | 35.0% |
| GCAAGTATTAGGGAATTCTA+TGG | + | tig0024442:73253-73272 | Msa1417150:intron | 35.0% | |
| ! | AGTTTGCATTTTACTGTGTG+TGG | + | tig0024442:73312-73331 | Msa1417150:intron | 35.0% |
| TGCTGAGGATAAAAAACAGA+AGG | + | tig0024442:73414-73433 | Msa1417150:CDS | 35.0% | |
| AAAACAGAAGGTTGTATGCA+TGG | + | tig0024442:73426-73445 | Msa1417150:CDS | 35.0% | |
| TTTGAAAGAGAAGAAGAGTG+TGG | + | tig0024442:73502-73521 | Msa1417150:CDS | 35.0% | |
| ! | AGAAGAGTGTGGAATATGTA+TGG | + | tig0024442:73513-73532 | Msa1417150:CDS | 35.0% |
| AATAAGGAATGTGTGTGTGA+GGG | - | tig0024442:73621-73640 | None:intergenic | 35.0% | |
| AAATAAGGAATGTGTGTGTG+AGG | - | tig0024442:73622-73641 | None:intergenic | 35.0% | |
| CAAGCCATGATCGTAAAATA+AGG | - | tig0024442:73637-73656 | None:intergenic | 35.0% | |
| !! | ATTTTACGATCATGGCTTGT+TGG | + | tig0024442:73638-73657 | Msa1417150:intron | 35.0% |
| CCTGTTAGGCATCATATATA+TGG | - | tig0024442:73971-73990 | None:intergenic | 35.0% | |
| CCATATATATGATGCCTAAC+AGG | + | tig0024442:73968-73987 | Msa1417150:intron | 35.0% | |
| ACAACATAACCCTCTTCTTA+CGG | - | tig0024442:73996-74015 | None:intergenic | 35.0% | |
| CAGTATTACACACACATTCA+TGG | + | tig0024442:74117-74136 | Msa1417150:intron | 35.0% | |
| ATTACATATGGACTTGAGAG+AGG | + | tig0024442:74167-74186 | Msa1417150:intron | 35.0% | |
| TTACATATGGACTTGAGAGA+GGG | + | tig0024442:74168-74187 | Msa1417150:intron | 35.0% | |
| TAAAATTGGAGTTGGGTAAG+TGG | - | tig0024442:74218-74237 | None:intergenic | 35.0% | |
| CCTGTTTCCTTCTTTCATAA+TGG | - | tig0024442:74545-74564 | None:intergenic | 35.0% | |
| CCATTATGAAAGAAGGAAAC+AGG | + | tig0024442:74542-74561 | Msa1417150:intron | 35.0% | |
| GTGTTCTCACTTACTTTACT+TGG | - | tig0024442:74600-74619 | None:intergenic | 35.0% | |
| AGTGAGAACACATTCATTGA+AGG | + | tig0024442:74609-74628 | Msa1417150:intron | 35.0% | |
| AACTGTTTGGAAACAAGGTT+AGG | - | tig0024442:74864-74883 | None:intergenic | 35.0% | |
| TGAATTTCGGAGACAAGAAA+GGG | - | tig0024442:74918-74937 | None:intergenic | 35.0% | |
| TTGAATTTCGGAGACAAGAA+AGG | - | tig0024442:74919-74938 | None:intergenic | 35.0% | |
| !! | GAAATAGCTTTATAAAGGCC+GGG | + | tig0024442:75090-75109 | Msa1417150:intron | 35.0% |
| TATACATATTGTCTGAGTGG+GGG | + | tig0024442:75320-75339 | Msa1417150:intron | 35.0% | |
| GTGAGTACAATACTGAAACT+AGG | + | tig0024442:75406-75425 | Msa1417150:intron | 35.0% | |
| CTAGGGTTTAGTATCTGATT+AGG | + | tig0024442:75424-75443 | Msa1417150:intron | 35.0% | |
| AGGCTATAAATAACTCCCTT+GGG | - | tig0024442:75468-75487 | None:intergenic | 35.0% | |
| AAGGCTATAAATAACTCCCT+TGG | - | tig0024442:75469-75488 | None:intergenic | 35.0% | |
| TATGCGTTTCTACCTATCTT+GGG | - | tig0024442:75529-75548 | None:intergenic | 35.0% | |
| ATATGCGTTTCTACCTATCT+TGG | - | tig0024442:75530-75549 | None:intergenic | 35.0% | |
| AGCCAGAATATCCATATTTG+GGG | - | tig0024442:75557-75576 | None:intergenic | 35.0% | |
| CAGCCAGAATATCCATATTT+GGG | - | tig0024442:75558-75577 | None:intergenic | 35.0% | |
| TCAGCCAGAATATCCATATT+TGG | - | tig0024442:75559-75578 | None:intergenic | 35.0% | |
| GACCACCAATACTCAAATAA+GGG | - | tig0024442:75681-75700 | None:intergenic | 35.0% | |
| ATTATCCTACAAATGAACCC+TGG | - | tig0024442:75756-75775 | None:intergenic | 35.0% | |
| ATGCTCTAATTGGAACTTAC+TGG | + | tig0024442:75774-75793 | Msa1417150:intron | 35.0% | |
| TGAACATTGAAAACAGTTCC+AGG | - | tig0024442:75959-75978 | None:intergenic | 35.0% | |
| GAAACTTGGTTAGACAACTA+GGG | - | tig0024442:76048-76067 | None:intergenic | 35.0% | |
| CTAGTTGTCTAACCAAGTTT+CGG | + | tig0024442:76047-76066 | Msa1417150:intron | 35.0% | |
| AGAAAACAATCACCGAAACT+TGG | - | tig0024442:76062-76081 | None:intergenic | 35.0% | |
| CTTGGTACACAACAAAATTG+TGG | + | tig0024442:76155-76174 | Msa1417150:intron | 35.0% | |
| TTAAGACTGTCACGACAAAA+GGG | - | tig0024442:76289-76308 | None:intergenic | 35.0% | |
| ! | TTTAAGACTGTCACGACAAA+AGG | - | tig0024442:76290-76309 | None:intergenic | 35.0% |
| TAACAAGAGAGAACCTTAGA+AGG | + | tig0024442:76374-76393 | Msa1417150:CDS | 35.0% | |
| TGTACATGAAAAGCCTTCTA+AGG | - | tig0024442:76390-76409 | None:intergenic | 35.0% | |
| TAAGGATCAAAAAGGGATTC+TGG | - | tig0024442:76436-76455 | None:intergenic | 35.0% | |
| GAGAGTCATAAGGATCAAAA+AGG | - | tig0024442:76444-76463 | None:intergenic | 35.0% | |
| CACAGAAATGTGTTCTTTGA+TGG | + | tig0024442:76487-76506 | Msa1417150:three_prime_UTR | 35.0% | |
| AGTTGGTCATGAAGTTGAAA+TGG | + | tig0024442:76627-76646 | Msa1417150:three_prime_UTR | 35.0% | |
| !!! | AAGATTTGTTTTAGGAGGGA+GGG | - | tig0024442:76767-76786 | None:intergenic | 35.0% |
| !!! | AAAGATTTGTTTTAGGAGGG+AGG | - | tig0024442:76768-76787 | None:intergenic | 35.0% |
| TTGATCATGAATGCATTGGA+TGG | + | tig0024442:76786-76805 | Msa1417150:three_prime_UTR | 35.0% | |
| TGGTTCATAGTCTAAGTTGT+TGG | - | tig0024442:76832-76851 | None:intergenic | 35.0% | |
| GGAAACATGTACATAAGTGG+TGG | + | tig0024442:71668-71687 | Msa1417150:exon | 40.0% | |
| ! | TTCCATGGGAAGGTCTTTTA+AGG | + | tig0024442:71697-71716 | Msa1417150:CDS | 40.0% |
| TTCCTTAAAAGACCTTCCCA+TGG | - | tig0024442:71702-71721 | None:intergenic | 40.0% | |
| ! | AACAGTGTCTCTGTCTTGTT+GGG | + | tig0024442:72063-72082 | Msa1417150:intron | 40.0% |
| GTACAACACAAAGGTAGTGA+AGG | - | tig0024442:72281-72300 | None:intergenic | 40.0% | |
| ACCTTTGTGTTGTACTCAGA+TGG | + | tig0024442:72286-72305 | Msa1417150:intron | 40.0% | |
| TCCATCTGAGTACAACACAA+AGG | - | tig0024442:72290-72309 | None:intergenic | 40.0% | |
| TTTCTCCACCTTATGGTATG+TGG | + | tig0024442:72405-72424 | Msa1417150:intron | 40.0% | |
| TTCTCCACCTTATGGTATGT+GGG | + | tig0024442:72406-72425 | Msa1417150:intron | 40.0% | |
| TGTTAGCAGGGATAGTACTT+TGG | + | tig0024442:72440-72459 | Msa1417150:intron | 40.0% | |
| CTGTATTTGTGATGAGTCTC+TGG | + | tig0024442:72584-72603 | Msa1417150:intron | 40.0% | |
| TGATGAGTCTCTGGTGAAAT+TGG | + | tig0024442:72593-72612 | Msa1417150:intron | 40.0% | |
| ! | GGTGAAATTGGACTAGAGAA+AGG | + | tig0024442:72605-72624 | Msa1417150:intron | 40.0% |
| TCAAGAAAAAGTTGCTGGAG+AGG | - | tig0024442:72717-72736 | None:intergenic | 40.0% | |
| GATCATATAATTGGGCGTGT+AGG | + | tig0024442:72758-72777 | Msa1417150:intron | 40.0% | |
| !! | AGCGCACTTGTTTCTTTTTC+TGG | + | tig0024442:72846-72865 | Msa1417150:intron | 40.0% |
| GCATAAACACTTGTCAGACT+GGG | + | tig0024442:73021-73040 | Msa1417150:intron | 40.0% | |
| ACCATTCATGGTAGCATTTC+AGG | - | tig0024442:73585-73604 | None:intergenic | 40.0% | |
| ! | CAGATTTTGCATAAGCGACA+TGG | + | tig0024442:73925-73944 | Msa1417150:intron | 40.0% |
| ! | TTTTGAATTGTGTGGTCCAG+TGG | + | tig0024442:74341-74360 | Msa1417150:intron | 40.0% |
| GACTTCACTAAAGGGTGAAA+GGG | - | tig0024442:74376-74395 | None:intergenic | 40.0% | |
| GCAAGTGAGAACACAATCAT+TGG | + | tig0024442:74651-74670 | Msa1417150:intron | 40.0% | |
| GTGAGAACACAATCATTGGA+TGG | + | tig0024442:74655-74674 | Msa1417150:intron | 40.0% | |
| GTTGCAACTGTTTGGAAACA+AGG | - | tig0024442:74869-74888 | None:intergenic | 40.0% | |
| TGTTTCCAAACAGTTGCAAC+TGG | + | tig0024442:74869-74888 | Msa1417150:intron | 40.0% | |
| GACTCAATTTCGCGAGTTTA+AGG | - | tig0024442:74997-75016 | None:intergenic | 40.0% | |
| TTGTAATCTCACACTAGTCC+CGG | - | tig0024442:75111-75130 | None:intergenic | 40.0% | |
| !!! | AGCGTGTTGCTATTTTCTTC+TGG | + | tig0024442:75144-75163 | Msa1417150:intron | 40.0% |
| TTAGATTCTGTCAGTCTCTC+AGG | + | tig0024442:75290-75309 | Msa1417150:intron | 40.0% | |
| TATCTGATTAGGTCATGCCT+TGG | + | tig0024442:75435-75454 | Msa1417150:intron | 40.0% | |
| ATCTGATTAGGTCATGCCTT+GGG | + | tig0024442:75436-75455 | Msa1417150:intron | 40.0% | |
| ACGTAATAAGAGGCCCAAAA+AGG | - | tig0024442:75488-75507 | None:intergenic | 40.0% | |
| GGAGTAAGTCACGTAATAAG+AGG | - | tig0024442:75498-75517 | None:intergenic | 40.0% | |
| TACCTATCTTGGGTGACTTA+GGG | - | tig0024442:75519-75538 | None:intergenic | 40.0% | |
| CCAGAATATCCATATTTGGG+GGG | - | tig0024442:75555-75574 | None:intergenic | 40.0% | |
| GCCAGAATATCCATATTTGG+GGG | - | tig0024442:75556-75575 | None:intergenic | 40.0% | |
| ! | GGATATTCTGGCTGAATATC+TGG | + | tig0024442:75564-75583 | Msa1417150:intron | 40.0% |
| GGACCACCAATACTCAAATA+AGG | - | tig0024442:75682-75701 | None:intergenic | 40.0% | |
| AACCCAGACTGTTGTTCTTT+AGG | + | tig0024442:75843-75862 | Msa1417150:intron | 40.0% | |
| AGCCTAAAGAACAACAGTCT+GGG | - | tig0024442:75848-75867 | None:intergenic | 40.0% | |
| AAGCCTAAAGAACAACAGTC+TGG | - | tig0024442:75849-75868 | None:intergenic | 40.0% | |
| CGAAACTTGGTTAGACAACT+AGG | - | tig0024442:76049-76068 | None:intergenic | 40.0% | |
| TAAGACTGTCACGACAAAAG+GGG | - | tig0024442:76288-76307 | None:intergenic | 40.0% | |
| TCTGGATATTCACCGATAGT+AGG | + | tig0024442:76329-76348 | Msa1417150:CDS | 40.0% | |
| CTGGATATTCACCGATAGTA+GGG | + | tig0024442:76330-76349 | Msa1417150:CDS | 40.0% | |
| GTCTACTATGTCCCTACTAT+CGG | - | tig0024442:76344-76363 | None:intergenic | 40.0% | |
| TAGTAGGGACATAGTAGACA+TGG | + | tig0024442:76345-76364 | Msa1417150:CDS | 40.0% | |
| AGGGATTCTGGTATGATCAA+AGG | - | tig0024442:76424-76443 | None:intergenic | 40.0% | |
| GAAATGTGTTCTTTGATGGG+TGG | + | tig0024442:76491-76510 | Msa1417150:three_prime_UTR | 40.0% | |
| GTTGAATGCAGACTTTGTTG+TGG | + | tig0024442:76886-76905 | Msa1417150:three_prime_UTR | 40.0% | |
| AAGTGGTGGTTCTTCTTCCA+TGG | + | tig0024442:71682-71701 | Msa1417150:CDS | 45.0% | |
| AGTGGTGGTTCTTCTTCCAT+GGG | + | tig0024442:71683-71702 | Msa1417150:CDS | 45.0% | |
| AGACACTGTTGATCGTTGAG+TGG | - | tig0024442:72053-72072 | None:intergenic | 45.0% | |
| CAACAGTGTCTCTGTCTTGT+TGG | + | tig0024442:72062-72081 | Msa1417150:intron | 45.0% | |
| ! | ACAGTGTCTCTGTCTTGTTG+GGG | + | tig0024442:72064-72083 | Msa1417150:intron | 45.0% |
| TCTCCACCTTATGGTATGTG+GGG | + | tig0024442:72407-72426 | Msa1417150:intron | 45.0% | |
| ACAATGCCCCACATACCATA+AGG | - | tig0024442:72416-72435 | None:intergenic | 45.0% | |
| GGCATTGTCACATGTTAGCA+GGG | + | tig0024442:72428-72447 | Msa1417150:intron | 45.0% | |
| ! | TGGACTAGAGAAAGGTTTCG+AGG | + | tig0024442:72613-72632 | Msa1417150:intron | 45.0% |
| !! | TAGGGCATCTGATTTTCCGA+GGG | + | tig0024442:72777-72796 | Msa1417150:intron | 45.0% |
| ! | GATTTTCCGAGGGAATACGA+TGG | + | tig0024442:72787-72806 | Msa1417150:CDS | 45.0% |
| AAAAGAAACAAGTGCGCTGC+TGG | - | tig0024442:72844-72863 | None:intergenic | 45.0% | |
| TGGACAGATTGCAATCTTGC+TGG | + | tig0024442:72874-72893 | Msa1417150:intron | 45.0% | |
| GGCATAAACACTTGTCAGAC+TGG | + | tig0024442:73020-73039 | Msa1417150:intron | 45.0% | |
| ATGCTGTAGGTGTATGTGGA+TGG | + | tig0024442:73199-73218 | Msa1417150:intron | 45.0% | |
| TGCTGTAGGTGTATGTGGAT+GGG | + | tig0024442:73200-73219 | Msa1417150:intron | 45.0% | |
| AGAAGGTTGTATGCATGGAG+CGG | + | tig0024442:73431-73450 | Msa1417150:CDS | 45.0% | |
| GTATCGTAGAAGAGAAGACG+AGG | + | tig0024442:73453-73472 | Msa1417150:CDS | 45.0% | |
| CACATGACATGGTTGCAGTT+AGG | - | tig0024442:73562-73581 | None:intergenic | 45.0% | |
| AGCATTTCAGGCACATGACA+TGG | - | tig0024442:73573-73592 | None:intergenic | 45.0% | |
| GCCTGAAATGCTACCATGAA+TGG | + | tig0024442:73581-73600 | Msa1417150:intron | 45.0% | |
| !! | GCAAGAGAGAGTACCATTCA+TGG | - | tig0024442:73597-73616 | None:intergenic | 45.0% |
| ! | TAACAGGCACCGTAAGAAGA+GGG | + | tig0024442:73984-74003 | Msa1417150:intron | 45.0% |
| AATTGGAGTTGGGTAAGTGG+TGG | - | tig0024442:74215-74234 | None:intergenic | 45.0% | |
| GGACTTCACTAAAGGGTGAA+AGG | - | tig0024442:74377-74396 | None:intergenic | 45.0% | |
| ! | GAGCAACGGACTTCACTAAA+GGG | - | tig0024442:74384-74403 | None:intergenic | 45.0% |
| ! | AGAGCAACGGACTTCACTAA+AGG | - | tig0024442:74385-74404 | None:intergenic | 45.0% |
| TCCTCGCATCTAAAGAGCAA+CGG | - | tig0024442:74398-74417 | None:intergenic | 45.0% | |
| TTGCTCTTTAGATGCGAGGA+AGG | + | tig0024442:74398-74417 | Msa1417150:intron | 45.0% | |
| CTGACTCACGATCTTCAAAC+AGG | - | tig0024442:74737-74756 | None:intergenic | 45.0% | |
| ! | AGATCGTGAGTCAGCATTGA+AGG | + | tig0024442:74743-74762 | Msa1417150:intron | 45.0% |
| !! | GAAGGCTTAGTTTGCGTTGT+TGG | + | tig0024442:74761-74780 | Msa1417150:intron | 45.0% |
| !!! | AGACTTTTTTTCGCGTCACC+AGG | + | tig0024442:74790-74809 | Msa1417150:intron | 45.0% |
| !!! | TTTTTTTCGCGTCACCAGGA+TGG | + | tig0024442:74794-74813 | Msa1417150:intron | 45.0% |
| CGCAAACAAAATCTCCATCC+TGG | - | tig0024442:74811-74830 | None:intergenic | 45.0% | |
| TTTGCGTCATCCACGACAAT+AGG | + | tig0024442:74825-74844 | Msa1417150:intron | 45.0% | |
| TGTCACAGAACCTATTGTCG+TGG | - | tig0024442:74838-74857 | None:intergenic | 45.0% | |
| CTCATCCAGTTGCAACTGTT+TGG | - | tig0024442:74877-74896 | None:intergenic | 45.0% | |
| CCTCTTTATGCTTGCTCCAA+AGG | - | tig0024442:75048-75067 | None:intergenic | 45.0% | |
| !! | CCTTTGGAGCAAGCATAAAG+AGG | + | tig0024442:75045-75064 | Msa1417150:intron | 45.0% |
| CTACCTATCTTGGGTGACTT+AGG | - | tig0024442:75520-75539 | None:intergenic | 45.0% | |
| CGCATATATCCCCCCAAATA+TGG | + | tig0024442:75543-75562 | Msa1417150:intron | 45.0% | |
| CCCCCCAAATATGGATATTC+TGG | + | tig0024442:75552-75571 | Msa1417150:intron | 45.0% | |
| !! | GGCCCTTATTTGAGTATTGG+TGG | + | tig0024442:75676-75695 | Msa1417150:intron | 45.0% |
| TTAACCAAGACTCATGCTCG+GGG | - | tig0024442:75711-75730 | None:intergenic | 45.0% | |
| CTTAACCAAGACTCATGCTC+GGG | - | tig0024442:75712-75731 | None:intergenic | 45.0% | |
| CCTTAACCAAGACTCATGCT+CGG | - | tig0024442:75713-75732 | None:intergenic | 45.0% | |
| CGAGCATGAGTCTTGGTTAA+GGG | + | tig0024442:75711-75730 | Msa1417150:intron | 45.0% | |
| GTTAAGGGCGAAGTGGTTAT+TGG | + | tig0024442:75726-75745 | Msa1417150:intron | 45.0% | |
| CAACAGTCTGGGTTCATACT+CGG | - | tig0024442:75837-75856 | None:intergenic | 45.0% | |
| ! | TTCTTTTCTGCCTCGTGTCT+TGG | + | tig0024442:76137-76156 | Msa1417150:intron | 45.0% |
| TTGTTGTGTACCAAGACACG+AGG | - | tig0024442:76150-76169 | None:intergenic | 45.0% | |
| ! | GTGTTCTTTGATGGGTGGTT+CGG | + | tig0024442:76496-76515 | Msa1417150:three_prime_UTR | 45.0% |
| AACTCAAGGCTGGAATCTTC+TGG | - | tig0024442:76600-76619 | None:intergenic | 45.0% | |
| ACCAACTCATCGCAAACTCA+AGG | - | tig0024442:76614-76633 | None:intergenic | 45.0% | |
| !!! | CATTTTTTTATTTTTTAAAA+TGG | - | tig0024442:74955-74974 | None:intergenic | 5.0% |
| GTGGTTCTTCTTCCATGGGA+AGG | + | tig0024442:71687-71706 | Msa1417150:CDS | 50.0% | |
| ATGCCCCACATACCATAAGG+TGG | - | tig0024442:72413-72432 | None:intergenic | 50.0% | |
| ! | GGGCATTGTCACATGTTAGC+AGG | + | tig0024442:72427-72446 | Msa1417150:intron | 50.0% |
| !! | GTAGGGCATCTGATTTTCCG+AGG | + | tig0024442:72776-72795 | Msa1417150:intron | 50.0% |
| CCACATACACCTACAGCATG+AGG | - | tig0024442:73198-73217 | None:intergenic | 50.0% | |
| CCTCATGCTGTAGGTGTATG+TGG | + | tig0024442:73195-73214 | Msa1417150:intron | 50.0% | |
| !! | AAGAGGTGTCACTGATGCTG+AGG | + | tig0024442:73399-73418 | Msa1417150:CDS | 50.0% |
| CTCTTCTTACGGTGCCTGTT+AGG | - | tig0024442:73985-74004 | None:intergenic | 50.0% | |
| ! | CTAACAGGCACCGTAAGAAG+AGG | + | tig0024442:73983-74002 | Msa1417150:intron | 50.0% |
| GAAAGGGCAATGATCACCAC+TGG | - | tig0024442:74360-74379 | None:intergenic | 50.0% | |
| TCCGTTGCTCTTTAGATGCG+AGG | + | tig0024442:74394-74413 | Msa1417150:intron | 50.0% | |
| CTGCTCGCTCGAAATAGAGA+GGG | + | tig0024442:74709-74728 | Msa1417150:intron | 50.0% | |
| TGCTCGCTCGAAATAGAGAG+GGG | + | tig0024442:74710-74729 | Msa1417150:intron | 50.0% | |
| TTTGATGCATGGTAGGGGCA+AGG | - | tig0024442:75346-75365 | None:intergenic | 50.0% | |
| ATGCCTTGGGAATGATCCCA+AGG | + | tig0024442:75449-75468 | Msa1417150:intron | 50.0% | |
| TGCCTTGGGAATGATCCCAA+GGG | + | tig0024442:75450-75469 | Msa1417150:intron | 50.0% | |
| CTCCCTAAGTCACCCAAGAT+AGG | + | tig0024442:75514-75533 | Msa1417150:intron | 50.0% | |
| ! | CTTGATGGTTTCGGGGGATA+AGG | + | tig0024442:75601-75620 | Msa1417150:intron | 50.0% |
| ATGGTTTCGGGGGATAAGGA+GGG | + | tig0024442:75605-75624 | Msa1417150:intron | 50.0% | |
| GTAGGCGACGTCCTTGTATA+GGG | + | tig0024442:75647-75666 | Msa1417150:intron | 50.0% | |
| ACGTCCTTGTATAGGGCTAG+CGG | + | tig0024442:75654-75673 | Msa1417150:intron | 50.0% | |
| ! | GCGGGCCCTTATTTGAGTAT+TGG | + | tig0024442:75673-75692 | Msa1417150:intron | 50.0% |
| TAACCAAGACTCATGCTCGG+GGG | - | tig0024442:75710-75729 | None:intergenic | 50.0% | |
| CCGAGCATGAGTCTTGGTTA+AGG | + | tig0024442:75710-75729 | Msa1417150:intron | 50.0% | |
| AGTCTTGGTTAAGGGCGAAG+TGG | + | tig0024442:75719-75738 | Msa1417150:intron | 50.0% | |
| AAGGGCGAAGTGGTTATTGG+CGG | + | tig0024442:75729-75748 | Msa1417150:intron | 50.0% | |
| AAGTGGTTATTGGCGGTCCA+GGG | + | tig0024442:75736-75755 | Msa1417150:intron | 50.0% | |
| ! | TCTTTGATGGGTGGTTCGGA+TGG | + | tig0024442:76500-76519 | Msa1417150:three_prime_UTR | 50.0% |
| ! | CTGGAATCTTCTGGAAGACG+TGG | - | tig0024442:76591-76610 | None:intergenic | 50.0% |
| ACTCATCGCAAACTCAAGGC+TGG | - | tig0024442:76610-76629 | None:intergenic | 50.0% | |
| GCCTTGAGTTTGCGATGAGT+TGG | + | tig0024442:76610-76629 | Msa1417150:three_prime_UTR | 50.0% | |
| CACGCACCATCGTATTCCCT+CGG | - | tig0024442:72796-72815 | None:intergenic | 55.0% | |
| TGCAATCTTGCTGGAGCCCT+TGG | + | tig0024442:72883-72902 | Msa1417150:CDS | 55.0% | |
| ATGCGAGGAAGGAGCAAGCA+AGG | + | tig0024442:74409-74428 | Msa1417150:intron | 55.0% | |
| CGAGCGAGCAGCAAACTGAA+CGG | - | tig0024442:74700-74719 | None:intergenic | 55.0% | |
| GCTGCTCGCTCGAAATAGAG+AGG | + | tig0024442:74708-74727 | Msa1417150:intron | 55.0% | |
| CTCCCTTGGGATCATTCCCA+AGG | - | tig0024442:75455-75474 | None:intergenic | 55.0% | |
| ! | GTTCGGGCTTGATGGTTTCG+GGG | + | tig0024442:75594-75613 | Msa1417150:intron | 55.0% |
| ! | TTCGGGCTTGATGGTTTCGG+GGG | + | tig0024442:75595-75614 | Msa1417150:intron | 55.0% |
| GATGGTTTCGGGGGATAAGG+AGG | + | tig0024442:75604-75623 | Msa1417150:intron | 55.0% | |
| TGGTTTCGGGGGATAAGGAG+GGG | + | tig0024442:75606-75625 | Msa1417150:intron | 55.0% | |
| CGTAGGCGACGTCCTTGTAT+AGG | + | tig0024442:75646-75665 | Msa1417150:intron | 55.0% | |
| ! | CGTCCTTGTATAGGGCTAGC+GGG | + | tig0024442:75655-75674 | Msa1417150:intron | 55.0% |
| GAAGTGGTTATTGGCGGTCC+AGG | + | tig0024442:75735-75754 | Msa1417150:intron | 55.0% | |
| GCGGTCCAGGGTTCATTTGT+AGG | + | tig0024442:75748-75767 | Msa1417150:intron | 55.0% | |
| GAGTAAACTCGGGCGATCTC+TGG | + | tig0024442:76311-76330 | Msa1417150:CDS | 55.0% | |
| AGCATGCCCTACGCAAGCGT+AGG | + | tig0024442:75629-75648 | Msa1417150:intron | 60.0% | |
| ACGTCGCCTACGCTTGCGTA+GGG | - | tig0024442:75638-75657 | None:intergenic | 60.0% | |
| AGTCCCCCGAGCATGAGTCT+TGG | + | tig0024442:75704-75723 | Msa1417150:intron | 60.0% | |
| GACGTCGCCTACGCTTGCGT+AGG | - | tig0024442:75639-75658 | None:intergenic | 65.0% | |
| GGGCCCGCTAGCCCTATACA+AGG | - | tig0024442:75661-75680 | None:intergenic | 65.0% | |
| GACTCATGCTCGGGGGACTG+TGG | - | tig0024442:75703-75722 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024442 | gene | 71594 | 76957 | 71594 | ID=Msa1417150;Name=Msa1417150 |
| tig0024442 | mRNA | 71594 | 76957 | 71594 | ID=Msa1417150-mRNA-1;Parent=Msa1417150;Name=Msa1417150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=80|0.25|0.4|1|0.25|0.4|5|483|212 |
| tig0024442 | exon | 71594 | 71765 | 71594 | ID=Msa1417150-mRNA-1:exon:23225;Parent=Msa1417150-mRNA-1 |
| tig0024442 | exon | 72780 | 72854 | 72780 | ID=Msa1417150-mRNA-1:exon:23226;Parent=Msa1417150-mRNA-1 |
| tig0024442 | exon | 72881 | 72930 | 72881 | ID=Msa1417150-mRNA-1:exon:23227;Parent=Msa1417150-mRNA-1 |
| tig0024442 | exon | 73368 | 73578 | 73368 | ID=Msa1417150-mRNA-1:exon:23228;Parent=Msa1417150-mRNA-1 |
| tig0024442 | exon | 76264 | 76957 | 76264 | ID=Msa1417150-mRNA-1:exon:23229;Parent=Msa1417150-mRNA-1 |
| tig0024442 | five_prime_UTR | 71594 | 71673 | 71594 | ID=Msa1417150-mRNA-1:five_prime_utr;Parent=Msa1417150-mRNA-1 |
| tig0024442 | CDS | 71674 | 71765 | 71674 | ID=Msa1417150-mRNA-1:cds;Parent=Msa1417150-mRNA-1 |
| tig0024442 | CDS | 72780 | 72854 | 72780 | ID=Msa1417150-mRNA-1:cds;Parent=Msa1417150-mRNA-1 |
| tig0024442 | CDS | 72881 | 72930 | 72881 | ID=Msa1417150-mRNA-1:cds;Parent=Msa1417150-mRNA-1 |
| tig0024442 | CDS | 73368 | 73578 | 73368 | ID=Msa1417150-mRNA-1:cds;Parent=Msa1417150-mRNA-1 |
| tig0024442 | CDS | 76264 | 76474 | 76264 | ID=Msa1417150-mRNA-1:cds;Parent=Msa1417150-mRNA-1 |
| tig0024442 | three_prime_UTR | 76475 | 76957 | 76475 | ID=Msa1417150-mRNA-1:three_prime_utr;Parent=Msa1417150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
