Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382160 | XP_003593908.1 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382160 | sp|Q9C6Z0|FBK17_ARATH | 68.473 | 406 | 119 | 2 | 15 | 419 | 1 | 398 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382160 | G7IP74 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa1382160 | 0.829107 | 6.193791e-55 | -8.615850e-47 |
| Msa0031340 | Msa1382160 | 0.810725 | 9.992525e-51 | -8.615850e-47 |
| Msa0034490 | Msa1382160 | 0.807967 | 3.902505e-50 | -8.615850e-47 |
| Msa0043980 | Msa1382160 | 0.802933 | 4.434823e-49 | -8.615850e-47 |
| Msa0044000 | Msa1382160 | 0.809511 | 1.825521e-50 | -8.615850e-47 |
| Msa0058490 | Msa1382160 | 0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0058510 | Msa1382160 | 0.808082 | 3.687747e-50 | -8.615850e-47 |
| Msa0074700 | Msa1382160 | 0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa0078750 | Msa1382160 | 0.825514 | 4.498229e-54 | -8.615850e-47 |
| Msa0079070 | Msa1382160 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0086130 | Msa1382160 | 0.813495 | 2.487305e-51 | -8.615850e-47 |
| Msa0095560 | Msa1382160 | 0.803594 | 3.235816e-49 | -8.615850e-47 |
| Msa0096450 | Msa1382160 | 0.835981 | 1.222712e-56 | -8.615850e-47 |
| Msa1348950 | Msa1382160 | 0.804530 | 2.066881e-49 | -8.615850e-47 |
| Msa1357530 | Msa1382160 | 0.804756 | 1.853721e-49 | -8.615850e-47 |
| Msa1362880 | Msa1382160 | 0.807220 | 5.622512e-50 | -8.615850e-47 |
| Msa1372760 | Msa1382160 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
| Msa1376760 | Msa1382160 | 0.831174 | 1.938890e-55 | -8.615850e-47 |
| Msa1382160 | Msa1389830 | 0.812450 | 4.214857e-51 | -8.615850e-47 |
| Msa1382160 | Msa1393040 | 0.820427 | 6.900356e-53 | -8.615850e-47 |
| Msa1382160 | Msa1411020 | 0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa1382160 | Msa1412890 | 0.818354 | 2.048404e-52 | -8.615850e-47 |
| Msa1382160 | Msa1417150 | 0.806887 | 6.611102e-50 | -8.615850e-47 |
| Msa1382160 | Msa1424290 | 0.802429 | 5.634127e-49 | -8.615850e-47 |
| Msa1382160 | Msa1427230 | 0.816043 | 6.777694e-52 | -8.615850e-47 |
| Msa1382160 | Msa1434350 | 0.804614 | 1.984960e-49 | -8.615850e-47 |
| Msa1382160 | Msa1439320 | 0.809173 | 2.156297e-50 | -8.615850e-47 |
| Msa1382160 | Msa1444740 | 0.827224 | 1.760624e-54 | -8.615850e-47 |
| Msa1382160 | Msa1445030 | 0.820560 | 6.430306e-53 | -8.615850e-47 |
| Msa1382160 | Msa1451620 | -0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa1382160 | Msa1452240 | 0.826147 | 3.181331e-54 | -8.615850e-47 |
| Msa1382160 | Msa1459950 | 0.922613 | 7.832717e-89 | -8.615850e-47 |
| Msa1382160 | Msa1460050 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
| Msa1382160 | Msa1460830 | 0.817196 | 3.738632e-52 | -8.615850e-47 |
| Msa1382160 | Msa1464940 | 0.839105 | 1.933269e-57 | -8.615850e-47 |
| Msa0608710 | Msa1382160 | 0.822037 | 2.934001e-53 | -8.615850e-47 |
| Msa0610430 | Msa1382160 | 0.803754 | 2.997067e-49 | -8.615850e-47 |
| Msa0610590 | Msa1382160 | 0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0621750 | Msa1382160 | -0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0626820 | Msa1382160 | 0.847302 | 1.260102e-59 | -8.615850e-47 |
| Msa0651190 | Msa1382160 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa0663920 | Msa1382160 | 0.832832 | 7.546505e-56 | -8.615850e-47 |
| Msa0664950 | Msa1382160 | 0.858370 | 8.629898e-63 | -8.615850e-47 |
| Msa0669440 | Msa1382160 | 0.800307 | 1.532801e-48 | -8.615850e-47 |
| Msa0672690 | Msa1382160 | 0.804977 | 1.667206e-49 | -8.615850e-47 |
| Msa0678820 | Msa1382160 | 0.816910 | 4.335073e-52 | -8.615850e-47 |
| Msa0684450 | Msa1382160 | 0.801582 | 8.412292e-49 | -8.615850e-47 |
| Msa0688070 | Msa1382160 | 0.800580 | 1.348236e-48 | -8.615850e-47 |
| Msa0692950 | Msa1382160 | 0.810118 | 1.351178e-50 | -8.615850e-47 |
| Msa0723110 | Msa1382160 | 0.804201 | 2.419708e-49 | -8.615850e-47 |
| Msa0740510 | Msa1382160 | 0.810199 | 1.297806e-50 | -8.615850e-47 |
| Msa0743720 | Msa1382160 | 0.835725 | 1.419762e-56 | -8.615850e-47 |
| Msa0767080 | Msa1382160 | 0.812038 | 5.184523e-51 | -8.615850e-47 |
| Msa0777230 | Msa1382160 | 0.805000 | 1.648653e-49 | -8.615850e-47 |
| Msa0798430 | Msa1382160 | 0.814952 | 1.185508e-51 | -8.615850e-47 |
| Msa0799370 | Msa1382160 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0820770 | Msa1382160 | 0.820080 | 8.286535e-53 | -8.615850e-47 |
| Msa0127650 | Msa1382160 | 0.823221 | 1.556295e-53 | -8.615850e-47 |
| Msa0133130 | Msa1382160 | 0.815082 | 1.109398e-51 | -8.615850e-47 |
| Msa0170320 | Msa1382160 | 0.836116 | 1.130057e-56 | -8.615850e-47 |
| Msa0191940 | Msa1382160 | 0.818016 | 2.442213e-52 | -8.615850e-47 |
| Msa0194950 | Msa1382160 | -0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0205510 | Msa1382160 | 0.813095 | 3.044843e-51 | -8.615850e-47 |
| Msa0220580 | Msa1382160 | 0.833711 | 4.557450e-56 | -8.615850e-47 |
| Msa0223010 | Msa1382160 | 0.801738 | 7.814121e-49 | -8.615850e-47 |
| Msa0234050 | Msa1382160 | 0.819042 | 1.429063e-52 | -8.615850e-47 |
| Msa0236630 | Msa1382160 | 0.957767 | 1.223540e-115 | -8.615850e-47 |
| Msa1233890 | Msa1382160 | 0.819433 | 1.164655e-52 | -8.615850e-47 |
| Msa1242220 | Msa1382160 | 0.804351 | 2.252601e-49 | -8.615850e-47 |
| Msa1244610 | Msa1382160 | 0.828019 | 1.134619e-54 | -8.615850e-47 |
| Msa1247250 | Msa1382160 | 0.816768 | 4.663855e-52 | -8.615850e-47 |
| Msa1253020 | Msa1382160 | 0.806623 | 7.517716e-50 | -8.615850e-47 |
| Msa1279210 | Msa1382160 | 0.800712 | 1.267052e-48 | -8.615850e-47 |
| Msa1284680 | Msa1382160 | 0.802383 | 5.758611e-49 | -8.615850e-47 |
| Msa1289010 | Msa1382160 | 0.818570 | 1.829852e-52 | -8.615850e-47 |
| Msa1293510 | Msa1382160 | 0.801245 | 9.863007e-49 | -8.615850e-47 |
| Msa1296940 | Msa1382160 | 0.801603 | 8.330181e-49 | -8.615850e-47 |
| Msa1305340 | Msa1382160 | 0.813972 | 1.952616e-51 | -8.615850e-47 |
| Msa1318990 | Msa1382160 | 0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa1322890 | Msa1382160 | 0.805278 | 1.442216e-49 | -8.615850e-47 |
| Msa1325860 | Msa1382160 | -0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa1327680 | Msa1382160 | 0.804866 | 1.758762e-49 | -8.615850e-47 |
| Msa1329550 | Msa1382160 | 0.803356 | 3.625143e-49 | -8.615850e-47 |
| Msa1331000 | Msa1382160 | 0.810547 | 1.091593e-50 | -8.615850e-47 |
| Msa1340020 | Msa1382160 | 0.803982 | 2.688008e-49 | -8.615850e-47 |
| Msa1340650 | Msa1382160 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0373930 | Msa1382160 | 0.827754 | 1.313600e-54 | -8.615850e-47 |
| Msa0379640 | Msa1382160 | 0.862358 | 5.364027e-64 | -8.615850e-47 |
| Msa0391690 | Msa1382160 | 0.830763 | 2.445148e-55 | -8.615850e-47 |
| Msa0394340 | Msa1382160 | 0.826589 | 2.496770e-54 | -8.615850e-47 |
| Msa0412840 | Msa1382160 | 0.807438 | 5.054975e-50 | -8.615850e-47 |
| Msa0428930 | Msa1382160 | 0.824650 | 7.194835e-54 | -8.615850e-47 |
| Msa0431690 | Msa1382160 | 0.817469 | 3.245743e-52 | -8.615850e-47 |
| Msa0433360 | Msa1382160 | 0.816411 | 5.606090e-52 | -8.615850e-47 |
| Msa0440750 | Msa1382160 | 0.819622 | 1.054417e-52 | -8.615850e-47 |
| Msa0442200 | Msa1382160 | 0.833978 | 3.907916e-56 | -8.615850e-47 |
| Msa0453350 | Msa1382160 | 0.833602 | 4.853905e-56 | -8.615850e-47 |
| Msa0453890 | Msa1382160 | 0.814146 | 1.787421e-51 | -8.615850e-47 |
| Msa0455040 | Msa1382160 | 0.805173 | 1.516911e-49 | -8.615850e-47 |
| Msa0475490 | Msa1382160 | 0.844439 | 7.553273e-59 | -8.615850e-47 |
| Msa0477080 | Msa1382160 | 0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0477130 | Msa1382160 | -0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0991670 | Msa1382160 | 0.816529 | 5.277023e-52 | -8.615850e-47 |
| Msa0993290 | Msa1382160 | 0.820180 | 7.861538e-53 | -8.615850e-47 |
| Msa0993600 | Msa1382160 | 0.811222 | 7.799592e-51 | -8.615850e-47 |
| Msa1019840 | Msa1382160 | -0.821554 | 3.796328e-53 | -8.615850e-47 |
| Msa1023180 | Msa1382160 | 0.811660 | 6.266214e-51 | -8.615850e-47 |
| Msa1023920 | Msa1382160 | 0.807163 | 5.779763e-50 | -8.615850e-47 |
| Msa1034150 | Msa1382160 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa1039800 | Msa1382160 | 0.817323 | 3.500826e-52 | -8.615850e-47 |
| Msa1043050 | Msa1382160 | 0.816852 | 4.465511e-52 | -8.615850e-47 |
| Msa1043390 | Msa1382160 | 0.814949 | 1.186991e-51 | -8.615850e-47 |
| Msa1043450 | Msa1382160 | 0.812285 | 4.578204e-51 | -8.615850e-47 |
| Msa1044420 | Msa1382160 | 0.812264 | 4.627736e-51 | -8.615850e-47 |
| Msa1075220 | Msa1382160 | -0.819507 | 1.119936e-52 | -8.615850e-47 |
| Msa1078750 | Msa1382160 | -0.803748 | 3.006754e-49 | -8.615850e-47 |
| Msa1082500 | Msa1382160 | 0.815310 | 9.870308e-52 | -8.615850e-47 |
| Msa1087850 | Msa1382160 | 0.823947 | 1.052780e-53 | -8.615850e-47 |
| Msa1090260 | Msa1382160 | 0.828861 | 7.102418e-55 | -8.615850e-47 |
| Msa0258760 | Msa1382160 | 0.801913 | 7.195298e-49 | -8.615850e-47 |
| Msa0282250 | Msa1382160 | 0.804473 | 2.124086e-49 | -8.615850e-47 |
| Msa0287410 | Msa1382160 | 0.816259 | 6.063083e-52 | -8.615850e-47 |
| Msa0298610 | Msa1382160 | 0.803706 | 3.067049e-49 | -8.615850e-47 |
| Msa0308270 | Msa1382160 | 0.823050 | 1.706316e-53 | -8.615850e-47 |
| Msa0309550 | Msa1382160 | 0.803400 | 3.549538e-49 | -8.615850e-47 |
| Msa0315290 | Msa1382160 | 0.933307 | 2.291851e-95 | -8.615850e-47 |
| Msa0315530 | Msa1382160 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
| Msa0339620 | Msa1382160 | 0.804006 | 2.657359e-49 | -8.615850e-47 |
| Msa0344910 | Msa1382160 | 0.816466 | 5.452071e-52 | -8.615850e-47 |
| Msa0344980 | Msa1382160 | 0.824849 | 6.458051e-54 | -8.615850e-47 |
| Msa0346430 | Msa1382160 | 0.835861 | 1.311133e-56 | -8.615850e-47 |
| Msa0356960 | Msa1382160 | 0.819994 | 8.671067e-53 | -8.615850e-47 |
| Msa1107900 | Msa1382160 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa1116130 | Msa1382160 | -0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa1131940 | Msa1382160 | -0.822419 | 2.392884e-53 | -8.615850e-47 |
| Msa1150710 | Msa1382160 | 0.809641 | 1.711756e-50 | -8.615850e-47 |
| Msa1151720 | Msa1382160 | 0.806701 | 7.238738e-50 | -8.615850e-47 |
| Msa1158670 | Msa1382160 | 0.807440 | 5.050022e-50 | -8.615850e-47 |
| Msa1159840 | Msa1382160 | 0.807108 | 5.938047e-50 | -8.615850e-47 |
| Msa1170170 | Msa1382160 | 0.805336 | 1.402335e-49 | -8.615850e-47 |
| Msa1174040 | Msa1382160 | 0.838622 | 2.577795e-57 | -8.615850e-47 |
| Msa1190930 | Msa1382160 | 0.804248 | 2.366407e-49 | -8.615850e-47 |
| Msa1204530 | Msa1382160 | 0.803779 | 2.961832e-49 | -8.615850e-47 |
| Msa1205130 | Msa1382160 | 0.804085 | 2.558448e-49 | -8.615850e-47 |
| Msa1206100 | Msa1382160 | 0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa1211150 | Msa1382160 | -0.802532 | 5.364649e-49 | -8.615850e-47 |
| Msa1212170 | Msa1382160 | 0.810801 | 9.623404e-51 | -8.615850e-47 |
| Msa1212250 | Msa1382160 | 0.820498 | 6.643524e-53 | -8.615850e-47 |
| Msa1224480 | Msa1382160 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0488270 | Msa1382160 | 0.806194 | 9.261917e-50 | -8.615850e-47 |
| Msa0489610 | Msa1382160 | 0.807455 | 5.011628e-50 | -8.615850e-47 |
| Msa0493630 | Msa1382160 | 0.836237 | 1.052897e-56 | -8.615850e-47 |
| Msa0502100 | Msa1382160 | 0.830740 | 2.477081e-55 | -8.615850e-47 |
| Msa0512750 | Msa1382160 | 0.813756 | 2.178632e-51 | -8.615850e-47 |
| Msa0516440 | Msa1382160 | 0.818342 | 2.060855e-52 | -8.615850e-47 |
| Msa0521430 | Msa1382160 | 0.816919 | 4.314083e-52 | -8.615850e-47 |
| Msa0536220 | Msa1382160 | 0.827972 | 1.164012e-54 | -8.615850e-47 |
| Msa0539750 | Msa1382160 | 0.823675 | 1.219233e-53 | -8.615850e-47 |
| Msa0540070 | Msa1382160 | 0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0543900 | Msa1382160 | 0.808136 | 3.591255e-50 | -8.615850e-47 |
| Msa0554740 | Msa1382160 | 0.852533 | 4.338139e-61 | -8.615850e-47 |
| Msa0578970 | Msa1382160 | 0.808178 | 3.517997e-50 | -8.615850e-47 |
| Msa0585230 | Msa1382160 | 0.800937 | 1.140316e-48 | -8.615850e-47 |
| Msa0595850 | Msa1382160 | 0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0599770 | Msa1382160 | 0.818147 | 2.280707e-52 | -8.615850e-47 |
| Msa0599890 | Msa1382160 | 0.825740 | 3.976261e-54 | -8.615850e-47 |
| Msa0846810 | Msa1382160 | 0.817736 | 2.824555e-52 | -8.615850e-47 |
| Msa0861090 | Msa1382160 | 0.809974 | 1.451382e-50 | -8.615850e-47 |
| Msa0862110 | Msa1382160 | 0.818316 | 2.089162e-52 | -8.615850e-47 |
| Msa0876850 | Msa1382160 | -0.812948 | 3.278842e-51 | -8.615850e-47 |
| Msa0927670 | Msa1382160 | 0.817959 | 2.515203e-52 | -8.615850e-47 |
| Msa0933230 | Msa1382160 | 0.809154 | 2.176490e-50 | -8.615850e-47 |
| Msa0942080 | Msa1382160 | -0.812138 | 4.929166e-51 | -8.615850e-47 |
| Msa0947660 | Msa1382160 | 0.804985 | 1.661077e-49 | -8.615850e-47 |
| Msa0969520 | Msa1382160 | 0.805519 | 1.283432e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382160 | MtrunA17_Chr2g0285851 | 97.284 | 405 | 11 | 0 | 15 | 419 | 1 | 405 | 0.0 | 823 |
| Msa1382160 | MtrunA17_Chr3g0138981 | 33.880 | 366 | 214 | 7 | 56 | 419 | 7 | 346 | 4.70e-67 | 217 |
| Msa1382160 | MtrunA17_Chr4g0063531 | 33.566 | 286 | 175 | 8 | 58 | 339 | 59 | 333 | 1.75e-42 | 154 |
| Msa1382160 | MtrunA17_Chr8g0378511 | 31.834 | 289 | 182 | 8 | 63 | 347 | 74 | 351 | 3.91e-38 | 143 |
| Msa1382160 | MtrunA17_Chr3g0115401 | 27.536 | 345 | 178 | 12 | 66 | 344 | 43 | 381 | 1.06e-30 | 123 |
| Msa1382160 | MtrunA17_Chr8g0348991 | 30.031 | 323 | 205 | 11 | 65 | 378 | 24 | 334 | 4.23e-30 | 119 |
| Msa1382160 | MtrunA17_Chr2g0278921 | 28.205 | 351 | 171 | 13 | 66 | 344 | 43 | 384 | 1.37e-29 | 119 |
| Msa1382160 | MtrunA17_Chr8g0377241 | 30.263 | 304 | 186 | 9 | 59 | 348 | 34 | 325 | 1.28e-28 | 115 |
| Msa1382160 | MtrunA17_Chr3g0122681 | 27.682 | 289 | 195 | 7 | 63 | 348 | 32 | 309 | 9.03e-24 | 102 |
| Msa1382160 | MtrunA17_Chr3g0129221 | 30.272 | 294 | 176 | 11 | 66 | 352 | 9 | 280 | 6.38e-23 | 99.4 |
| Msa1382160 | MtrunA17_Chr2g0326541 | 26.377 | 345 | 230 | 9 | 64 | 400 | 18 | 346 | 1.08e-20 | 92.8 |
| Msa1382160 | MtrunA17_Chr8g0378571 | 30.357 | 224 | 140 | 4 | 66 | 276 | 7 | 227 | 9.65e-19 | 87.0 |
| Msa1382160 | MtrunA17_Chr4g0011151 | 23.120 | 359 | 226 | 12 | 26 | 368 | 80 | 404 | 3.10e-17 | 83.6 |
| Msa1382160 | MtrunA17_Chr4g0011171 | 22.841 | 359 | 227 | 12 | 26 | 368 | 80 | 404 | 1.30e-16 | 81.6 |
| Msa1382160 | MtrunA17_Chr7g0260051 | 29.954 | 217 | 135 | 7 | 66 | 272 | 4 | 213 | 1.31e-16 | 80.5 |
| Msa1382160 | MtrunA17_Chr4g0011221 | 23.120 | 359 | 226 | 12 | 26 | 368 | 80 | 404 | 1.78e-16 | 81.3 |
| Msa1382160 | MtrunA17_Chr6g0459491 | 24.662 | 296 | 196 | 9 | 67 | 347 | 57 | 340 | 2.29e-16 | 80.5 |
| Msa1382160 | MtrunA17_Chr4g0011161 | 22.563 | 359 | 228 | 12 | 26 | 368 | 80 | 404 | 2.68e-16 | 80.5 |
| Msa1382160 | MtrunA17_Chr4g0010131 | 21.907 | 388 | 259 | 13 | 29 | 392 | 25 | 392 | 1.37e-15 | 78.2 |
| Msa1382160 | MtrunA17_Chr4g0011191 | 25.100 | 251 | 155 | 7 | 26 | 275 | 80 | 298 | 5.13e-15 | 75.5 |
| Msa1382160 | MtrunA17_Chr4g0060541 | 22.191 | 356 | 241 | 12 | 58 | 393 | 23 | 362 | 3.92e-13 | 70.5 |
| Msa1382160 | MtrunA17_Chr3g0144091 | 25.519 | 337 | 174 | 15 | 70 | 351 | 143 | 457 | 2.54e-12 | 68.6 |
| Msa1382160 | MtrunA17_Chr7g0225551 | 23.256 | 301 | 206 | 9 | 60 | 347 | 43 | 331 | 6.95e-12 | 66.6 |
| Msa1382160 | MtrunA17_Chr7g0243481 | 32.192 | 146 | 93 | 5 | 170 | 313 | 165 | 306 | 6.76e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382160 | AT1G30090.1 | 68.473 | 406 | 119 | 2 | 15 | 419 | 1 | 398 | 0.0 | 599 |
| Msa1382160 | AT2G24540.1 | 37.433 | 374 | 217 | 9 | 49 | 418 | 11 | 371 | 5.61e-83 | 259 |
| Msa1382160 | AT1G55270.1 | 32.975 | 279 | 178 | 7 | 63 | 340 | 75 | 345 | 3.54e-41 | 151 |
| Msa1382160 | AT1G22040.1 | 30.233 | 344 | 169 | 13 | 66 | 344 | 43 | 380 | 6.70e-34 | 132 |
| Msa1382160 | AT1G67480.3 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa1382160 | AT1G67480.1 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa1382160 | AT1G67480.2 | 32.069 | 290 | 186 | 6 | 56 | 342 | 29 | 310 | 2.96e-33 | 129 |
| Msa1382160 | AT1G27420.1 | 26.398 | 322 | 184 | 9 | 65 | 386 | 9 | 277 | 1.43e-25 | 107 |
| Msa1382160 | AT1G55270.2 | 29.464 | 224 | 150 | 6 | 118 | 340 | 3 | 219 | 7.92e-22 | 95.5 |
| Msa1382160 | AT5G60570.2 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa1382160 | AT5G60570.1 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa1382160 | AT5G60570.3 | 27.365 | 296 | 193 | 7 | 59 | 346 | 39 | 320 | 6.07e-21 | 94.4 |
| Msa1382160 | AT3G63220.1 | 28.472 | 288 | 173 | 10 | 66 | 342 | 4 | 269 | 7.42e-20 | 90.5 |
| Msa1382160 | AT3G63220.3 | 28.472 | 288 | 173 | 10 | 66 | 342 | 11 | 276 | 8.26e-20 | 90.5 |
| Msa1382160 | AT3G63220.2 | 28.472 | 288 | 173 | 10 | 66 | 342 | 11 | 276 | 8.26e-20 | 90.5 |
| Msa1382160 | AT3G61350.2 | 22.956 | 318 | 219 | 11 | 66 | 375 | 21 | 320 | 1.42e-18 | 87.0 |
| Msa1382160 | AT3G61350.1 | 22.956 | 318 | 219 | 11 | 66 | 375 | 21 | 320 | 1.42e-18 | 87.0 |
| Msa1382160 | AT1G16250.2 | 27.530 | 247 | 162 | 7 | 63 | 299 | 5 | 244 | 1.47e-18 | 87.4 |
| Msa1382160 | AT1G16250.1 | 27.530 | 247 | 162 | 7 | 63 | 299 | 5 | 244 | 1.47e-18 | 87.4 |
| Msa1382160 | AT2G21950.1 | 27.303 | 304 | 194 | 11 | 66 | 358 | 20 | 307 | 3.68e-17 | 83.2 |
| Msa1382160 | AT4G39580.1 | 25.874 | 286 | 184 | 10 | 70 | 344 | 26 | 294 | 1.17e-14 | 75.5 |
| Msa1382160 | AT3G27150.2 | 23.269 | 361 | 243 | 10 | 5 | 347 | 4 | 348 | 8.91e-14 | 73.2 |
| Msa1382160 | AT3G27150.1 | 23.269 | 361 | 243 | 10 | 5 | 347 | 4 | 348 | 8.91e-14 | 73.2 |
| Msa1382160 | AT1G26930.1 | 23.602 | 322 | 212 | 10 | 66 | 368 | 71 | 377 | 8.99e-13 | 70.1 |
| Msa1382160 | AT1G60570.1 | 25.342 | 292 | 189 | 11 | 63 | 342 | 17 | 291 | 1.53e-12 | 68.9 |
| Msa1382160 | AT1G80440.1 | 29.279 | 222 | 143 | 7 | 66 | 276 | 3 | 221 | 6.88e-11 | 63.9 |
Find 123 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCCTCACAACTTTCTTT+TGG | 0.176864 | tig0020490:-89948 | None:intergenic |
| ATCAGGTAAGCCCGGAATTA+AGG | 0.209782 | tig0020490:-88995 | None:intergenic |
| GGTTCAAGCGTGGTTGTTTA+TGG | 0.236597 | tig0020490:+89726 | Msa1382160:CDS |
| TAATTGTCTTCTTCGTCTTC+CGG | 0.313205 | tig0020490:+89029 | Msa1382160:CDS |
| TTGTCCTTGCAAGGCATTGC+AGG | 0.324010 | tig0020490:-89246 | None:intergenic |
| TGTCGTAGGCCGGAATCTTC+TGG | 0.330235 | tig0020490:+89896 | Msa1382160:CDS |
| AAGAAAGTTGTGAGGGGAAA+TGG | 0.336256 | tig0020490:+89952 | Msa1382160:CDS |
| TGACACTATCTCCCAAGTTT+AGG | 0.343062 | tig0020490:+88905 | Msa1382160:CDS |
| AGCCATAGTTTCCCAGCTAT+TGG | 0.348050 | tig0020490:-89679 | None:intergenic |
| TGCCAACATGGGAACCAATA+TGG | 0.351045 | tig0020490:+89554 | Msa1382160:CDS |
| TGTTTCTTATTAAAGGGTTT+AGG | 0.355686 | tig0020490:+88789 | Msa1382160:intron |
| CTTCCCAGGAATCGGCTTCC+TGG | 0.361899 | tig0020490:-89800 | None:intergenic |
| AGGCAAAGGGGAGCCATCTA+TGG | 0.368132 | tig0020490:-89823 | None:intergenic |
| TAGATCCGATTAGCGGGAAT+TGG | 0.368843 | tig0020490:+89523 | Msa1382160:CDS |
| CCTCTAGGAGAGACATAAAA+AGG | 0.369553 | tig0020490:-89636 | None:intergenic |
| AGAGCTTGAAGGGGTCAAAT+TGG | 0.369698 | tig0020490:-90021 | None:intergenic |
| AACCAATAGCTGGGAAACTA+TGG | 0.377206 | tig0020490:+89677 | Msa1382160:CDS |
| AGAGAAGAACCCTTAATTCC+GGG | 0.383870 | tig0020490:+88985 | Msa1382160:CDS |
| AAGAGAAGAACCCTTAATTC+CGG | 0.391873 | tig0020490:+88984 | Msa1382160:CDS |
| GTTCAGAACTGCAGCATCAT+AGG | 0.399835 | tig0020490:-89580 | None:intergenic |
| ATAACCAGGAAGCCGATTCC+TGG | 0.405175 | tig0020490:+89796 | Msa1382160:CDS |
| GTTTCCCAGCTATTGGTTCT+CGG | 0.422970 | tig0020490:-89672 | None:intergenic |
| GCGCGCCAATTCCCGCTAAT+CGG | 0.425020 | tig0020490:-89528 | None:intergenic |
| AGCATCATAGGATGCCATAT+TGG | 0.428156 | tig0020490:-89568 | None:intergenic |
| TCAGGTAAGCCCGGAATTAA+GGG | 0.433050 | tig0020490:-88994 | None:intergenic |
| TGCATATTTGCTCAGGCAAA+GGG | 0.438541 | tig0020490:-89836 | None:intergenic |
| GAGATTTAACGATAAAGATA+AGG | 0.440458 | tig0020490:+88821 | Msa1382160:intron |
| GCTCGAAAGAATGAAGCTTA+AGG | 0.440805 | tig0020490:+89770 | Msa1382160:CDS |
| TCACAAGCATTCACAGCAAA+AGG | 0.445454 | tig0020490:-89861 | None:intergenic |
| CAACAGCAACCAGAAGATTC+CGG | 0.446885 | tig0020490:-89905 | None:intergenic |
| TTATGTCTCTCCTAGAGGAC+AGG | 0.451993 | tig0020490:+89641 | Msa1382160:CDS |
| TTTGACCCCTTCAAGCTCTC+AGG | 0.453320 | tig0020490:+90025 | Msa1382160:CDS |
| AACCACCGCTAACCTAAACT+TGG | 0.453592 | tig0020490:-88917 | None:intergenic |
| AAAGGTTTGCATATTTGCTC+AGG | 0.456311 | tig0020490:-89843 | None:intergenic |
| CGTGGATTGTCCTCTTGACT+TGG | 0.459145 | tig0020490:+89347 | Msa1382160:CDS |
| TTTGCATATCATAAGTGTAC+TGG | 0.463348 | tig0020490:+89171 | Msa1382160:CDS |
| AAGGACAAGGTTTGTCCTCA+TGG | 0.464137 | tig0020490:+89261 | Msa1382160:CDS |
| ATGATGCTGCAGTTCTGAAC+GGG | 0.464281 | tig0020490:+89583 | Msa1382160:CDS |
| AAATGGGTTTCAAAGATCCT+TGG | 0.469304 | tig0020490:+89139 | Msa1382160:CDS |
| ATCTATGGCTTCCCAGGAAT+CGG | 0.471739 | tig0020490:-89808 | None:intergenic |
| GATTCCTGGGAAGCCATAGA+TGG | 0.472750 | tig0020490:+89810 | Msa1382160:CDS |
| CCTCTTGCAGACAGCCCTAC+AGG | 0.472883 | tig0020490:-89067 | None:intergenic |
| GTCAAATTTATGTCGTAGGC+CGG | 0.477828 | tig0020490:+89886 | Msa1382160:CDS |
| ATCTCCCAAGTTTAGGTTAG+CGG | 0.477981 | tig0020490:+88912 | Msa1382160:CDS |
| TACTGGAAAGATTCAATGGC+AGG | 0.482203 | tig0020490:+89188 | Msa1382160:CDS |
| TTGTAACAGAAGGATGGTTA+TGG | 0.483194 | tig0020490:+89613 | Msa1382160:CDS |
| CAATTAAGAGCAACATCATC+AGG | 0.483657 | tig0020490:-89012 | None:intergenic |
| CGGAATCTTCTGGTTGCTGT+TGG | 0.483823 | tig0020490:+89906 | Msa1382160:CDS |
| GGAGCCATCTATGGCTTCCC+AGG | 0.485903 | tig0020490:-89814 | None:intergenic |
| TAGTACTGATCTTTATGAGC+TGG | 0.486572 | tig0020490:+89485 | Msa1382160:CDS |
| ACGATCCGAGAACCAATAGC+TGG | 0.496530 | tig0020490:+89667 | Msa1382160:CDS |
| TTTACTAATAGGAAGCAAAT+GGG | 0.500450 | tig0020490:+89123 | Msa1382160:CDS |
| AATAGCACCTGAGAGCTTGA+AGG | 0.504117 | tig0020490:-90032 | None:intergenic |
| TTGCATATTTGCTCAGGCAA+AGG | 0.504929 | tig0020490:-89837 | None:intergenic |
| CTTGCAAGGCATTGCAGGGA+TGG | 0.507543 | tig0020490:-89241 | None:intergenic |
| AGCTGGGAAACTATGGCTGT+TGG | 0.507613 | tig0020490:+89684 | Msa1382160:CDS |
| GATGGGATGGTTTATGCAGC+TGG | 0.507844 | tig0020490:+89456 | Msa1382160:CDS |
| CAGGATGAATGACTTTGAAC+CGG | 0.508558 | tig0020490:-89048 | None:intergenic |
| TGCCATATTGGTTCCCATGT+TGG | 0.508940 | tig0020490:-89556 | None:intergenic |
| TGCAATGCCTTGCAAGGACA+AGG | 0.510866 | tig0020490:+89248 | Msa1382160:CDS |
| ATGGGATGGTTTATGCAGCT+GGG | 0.512009 | tig0020490:+89457 | Msa1382160:CDS |
| AGGTATTAGATCCGATTAGC+GGG | 0.521082 | tig0020490:+89517 | Msa1382160:CDS |
| TTGGGAGATAGTGTCATTTG+AGG | 0.521340 | tig0020490:-88898 | None:intergenic |
| AATGGAACTTCAGTGTTCAA+TGG | 0.527552 | tig0020490:+89970 | Msa1382160:CDS |
| AGTGTACTGGAAAGATTCAA+TGG | 0.529957 | tig0020490:+89184 | Msa1382160:CDS |
| ATAGCACCTGAGAGCTTGAA+GGG | 0.534517 | tig0020490:-90031 | None:intergenic |
| GCTCAGAAACAACAAATAAG+TGG | 0.537113 | tig0020490:-89749 | None:intergenic |
| TAACCAGGAAGCCGATTCCT+GGG | 0.538113 | tig0020490:+89797 | Msa1382160:CDS |
| CTTAGAGAATGATCTAACTC+TGG | 0.539641 | tig0020490:-88964 | None:intergenic |
| TTTGCCAGTGGAGTAATCGA+TGG | 0.542803 | tig0020490:+89438 | Msa1382160:CDS |
| CAAGCACCGGTTCACAAGCT+AGG | 0.543317 | tig0020490:+88871 | Msa1382160:CDS |
| TTGCCAGTGGAGTAATCGAT+GGG | 0.543911 | tig0020490:+89439 | Msa1382160:CDS |
| AAGAGGTGGCATATGTTACT+TGG | 0.546808 | tig0020490:+89084 | Msa1382160:CDS |
| GGACTTAGAGAAGGGTGGAC+TGG | 0.550423 | tig0020490:+89705 | Msa1382160:CDS |
| TTGGCGCGCTATTGCCAACA+TGG | 0.550527 | tig0020490:+89542 | Msa1382160:CDS |
| GGATCACCTAGCTTGTGAAC+CGG | 0.553072 | tig0020490:-88877 | None:intergenic |
| GCAACATCATCAGGTAAGCC+CGG | 0.556029 | tig0020490:-89003 | None:intergenic |
| TCAAAGTCATTCATCCTGTA+GGG | 0.557607 | tig0020490:+89053 | Msa1382160:CDS |
| GGATCGTAGACCTGTCCTCT+AGG | 0.560032 | tig0020490:-89651 | None:intergenic |
| CATCCCTGCAATGCCTTGCA+AGG | 0.560526 | tig0020490:+89242 | Msa1382160:CDS |
| GATTGTCAAATTTATGTCGT+AGG | 0.561359 | tig0020490:+89882 | Msa1382160:CDS |
| GAATGATCTAACTCTGGCAT+CGG | 0.561877 | tig0020490:-88958 | None:intergenic |
| CATCCCATCGATTACTCCAC+TGG | 0.564791 | tig0020490:-89442 | None:intergenic |
| TGTCCTTGCAAGGCATTGCA+GGG | 0.566024 | tig0020490:-89245 | None:intergenic |
| TCTTTACGTATGCGGTGGCA+TGG | 0.567533 | tig0020490:+89317 | Msa1382160:CDS |
| AACCCAAAAGAAAGTTGTGA+GGG | 0.567884 | tig0020490:+89945 | Msa1382160:CDS |
| TTCAAAGTCATTCATCCTGT+AGG | 0.569327 | tig0020490:+89052 | Msa1382160:CDS |
| TATGATGCTGCAGTTCTGAA+CGG | 0.569619 | tig0020490:+89582 | Msa1382160:CDS |
| GTAGGGCTGTCTGCAAGAGG+TGG | 0.571680 | tig0020490:+89070 | Msa1382160:CDS |
| ATGGCTGTTGGACTTAGAGA+AGG | 0.574595 | tig0020490:+89696 | Msa1382160:CDS |
| CCTGTAGGGCTGTCTGCAAG+AGG | 0.578172 | tig0020490:+89067 | Msa1382160:CDS |
| CAGTGGAGTAATCGATGGGA+TGG | 0.581579 | tig0020490:+89443 | Msa1382160:CDS |
| TGTTACTTGGTAGTAAAGAG+AGG | 0.594306 | tig0020490:+89097 | Msa1382160:CDS |
| GGACAAACCTTGTCCTTGCA+AGG | 0.597418 | tig0020490:-89255 | None:intergenic |
| TGGGATGGTTTATGCAGCTG+GGG | 0.601401 | tig0020490:+89458 | Msa1382160:CDS |
| GAAGCTTAAGGTTTATAACC+AGG | 0.604476 | tig0020490:+89782 | Msa1382160:CDS |
| TCCCAAGTTTAGGTTAGCGG+TGG | 0.605858 | tig0020490:+88915 | Msa1382160:CDS |
| TTATGAGCTGGATTCAGCTG+AGG | 0.606127 | tig0020490:+89497 | Msa1382160:CDS |
| TATTTCAACACCAAGTCAAG+AGG | 0.607388 | tig0020490:-89357 | None:intergenic |
| CGGTGGCATGGTCTCTGACG+TGG | 0.609464 | tig0020490:+89329 | Msa1382160:CDS |
| GAGGTATTAGATCCGATTAG+CGG | 0.618113 | tig0020490:+89516 | Msa1382160:CDS |
| GGGAAACTGCTTGTAACAGA+AGG | 0.619168 | tig0020490:+89603 | Msa1382160:CDS |
| CGATCCGAGAACCAATAGCT+GGG | 0.621734 | tig0020490:+89668 | Msa1382160:CDS |
| TGGCTGTTGGACTTAGAGAA+GGG | 0.623432 | tig0020490:+89697 | Msa1382160:CDS |
| AACTGCTTGTAACAGAAGGA+TGG | 0.627353 | tig0020490:+89607 | Msa1382160:CDS |
| TGGCGCGCTATTGCCAACAT+GGG | 0.632332 | tig0020490:+89543 | Msa1382160:CDS |
| TGAATCGAATGATCAGTGCT+AGG | 0.644133 | tig0020490:+89409 | Msa1382160:CDS |
| CTGTTGGACTTAGAGAAGGG+TGG | 0.655252 | tig0020490:+89700 | Msa1382160:CDS |
| GGTAATCTTTACGTATGCGG+TGG | 0.656082 | tig0020490:+89312 | Msa1382160:CDS |
| TGTGTTTCGATGCCTCACGA+TGG | 0.656289 | tig0020490:+89291 | Msa1382160:CDS |
| ACCACCGCTAACCTAAACTT+GGG | 0.656767 | tig0020490:-88916 | None:intergenic |
| GCATATTTGCTCAGGCAAAG+GGG | 0.660049 | tig0020490:-89835 | None:intergenic |
| CTAGTAACTCAAAATGCGCG+TGG | 0.665345 | tig0020490:+87866 | None:intergenic |
| ACGTAAAGATTACCATCGTG+AGG | 0.668276 | tig0020490:-89303 | None:intergenic |
| AGGGTGGACTGGTTCAAGCG+TGG | 0.672213 | tig0020490:+89716 | Msa1382160:CDS |
| GGGATGGTTTATGCAGCTGG+GGG | 0.673599 | tig0020490:+89459 | Msa1382160:CDS |
| GAACCCAAAAGAAAGTTGTG+AGG | 0.676488 | tig0020490:+89944 | Msa1382160:CDS |
| ACTGATCATTCGATTCATCA+CGG | 0.677591 | tig0020490:-89403 | None:intergenic |
| GGATGGTTTATGCAGCTGGG+GGG | 0.678556 | tig0020490:+89460 | Msa1382160:CDS |
| ACCCAAAAGAAAGTTGTGAG+GGG | 0.696628 | tig0020490:+89946 | Msa1382160:CDS |
| TAGCACCTGAGAGCTTGAAG+GGG | 0.706757 | tig0020490:-90030 | None:intergenic |
| GATGGTAATCTTTACGTATG+CGG | 0.716864 | tig0020490:+89309 | Msa1382160:CDS |
| GAAACACACCGAAAACCATG+AGG | 0.732405 | tig0020490:-89276 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATAGCAAATTAA+AGG | - | tig0020490:88614-88633 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTCTTATTAAA+GGG | + | tig0020490:88783-88802 | Msa1382160:intron | 10.0% |
| !!! | ATTTTTTTATAGCAAATTAA+AGG | - | tig0020490:88614-88633 | None:intergenic | 10.0% |
| !!! | TTTTATTGTTTCTTATTAAA+GGG | + | tig0020490:88783-88802 | Msa1382160:intron | 10.0% |
| !!! | ATGATTAATTTTTTGCTAAT+AGG | - | tig0020490:87951-87970 | None:intergenic | 15.0% |
| !! | AATAAAAATCTCAACTTTAT+AGG | - | tig0020490:88293-88312 | None:intergenic | 15.0% |
| !!! | GTTTTATTGTTTCTTATTAA+AGG | + | tig0020490:88782-88801 | Msa1382160:intron | 15.0% |
| !!! | ATGATTAATTTTTTGCTAAT+AGG | - | tig0020490:87951-87970 | None:intergenic | 15.0% |
| !! | AATAAAAATCTCAACTTTAT+AGG | - | tig0020490:88293-88312 | None:intergenic | 15.0% |
| !!! | GTTTTATTGTTTCTTATTAA+AGG | + | tig0020490:88782-88801 | Msa1382160:intron | 15.0% |
| !! | TTAACACATACATAAATTCT+GGG | + | tig0020490:88213-88232 | Msa1382160:intron | 20.0% |
| !!! | TTTTTATTTGATATTGCTTC+TGG | + | tig0020490:88305-88324 | Msa1382160:intron | 20.0% |
| !!! | TTTTATTTGATATTGCTTCT+GGG | + | tig0020490:88306-88325 | Msa1382160:intron | 20.0% |
| !! | ATCAGTTGAATATCTAATAA+GGG | + | tig0020490:88491-88510 | Msa1382160:intron | 20.0% |
| !! | TTAACACATACATAAATTCT+GGG | + | tig0020490:88213-88232 | Msa1382160:intron | 20.0% |
| !!! | TTTTTATTTGATATTGCTTC+TGG | + | tig0020490:88305-88324 | Msa1382160:intron | 20.0% |
| !!! | TTTTATTTGATATTGCTTCT+GGG | + | tig0020490:88306-88325 | Msa1382160:intron | 20.0% |
| !! | ATCAGTTGAATATCTAATAA+GGG | + | tig0020490:88491-88510 | Msa1382160:intron | 20.0% |
| ! | GTTAACACATACATAAATTC+TGG | + | tig0020490:88212-88231 | Msa1382160:intron | 25.0% |
| ! | TTTATAGGAAAATAACAGTG+AGG | - | tig0020490:88278-88297 | None:intergenic | 25.0% |
| ! | TTTATTTGATATTGCTTCTG+GGG | + | tig0020490:88307-88326 | Msa1382160:intron | 25.0% |
| !!! | GTGCAAAATTATAGCTTTTT+TGG | + | tig0020490:88372-88391 | Msa1382160:intron | 25.0% |
| ! | GATCAGTTGAATATCTAATA+AGG | + | tig0020490:88490-88509 | Msa1382160:intron | 25.0% |
| ! | TCAGTTGAATATCTAATAAG+GGG | + | tig0020490:88492-88511 | Msa1382160:intron | 25.0% |
| !!! | TGTTTTATTCTATCTGCTTT+TGG | + | tig0020490:88527-88546 | Msa1382160:intron | 25.0% |
| !! | TTTTCTCTTTATTGTGGATT+AGG | + | tig0020490:88577-88596 | Msa1382160:intron | 25.0% |
| ! | TATCTCTTGGATTGAAAATT+TGG | + | tig0020490:88672-88691 | Msa1382160:intron | 25.0% |
| ! | TGTTTCTTATTAAAGGGTTT+AGG | + | tig0020490:88789-88808 | Msa1382160:intron | 25.0% |
| ! | GAGATTTAACGATAAAGATA+AGG | + | tig0020490:88821-88840 | Msa1382160:intron | 25.0% |
| !!! | AAGAGAGGTTTTTTACTAAT+AGG | + | tig0020490:89112-89131 | Msa1382160:CDS | 25.0% |
| !! | TTTTACTAATAGGAAGCAAA+TGG | + | tig0020490:89122-89141 | Msa1382160:CDS | 25.0% |
| ! | TTTACTAATAGGAAGCAAAT+GGG | + | tig0020490:89123-89142 | Msa1382160:CDS | 25.0% |
| !! | GTCAAATTGGATAAACTTTT+AGG | - | tig0020490:90011-90030 | None:intergenic | 25.0% |
| ! | GTTAACACATACATAAATTC+TGG | + | tig0020490:88212-88231 | Msa1382160:intron | 25.0% |
| ! | TTTATAGGAAAATAACAGTG+AGG | - | tig0020490:88278-88297 | None:intergenic | 25.0% |
| ! | TTTATTTGATATTGCTTCTG+GGG | + | tig0020490:88307-88326 | Msa1382160:intron | 25.0% |
| !!! | GTGCAAAATTATAGCTTTTT+TGG | + | tig0020490:88372-88391 | Msa1382160:intron | 25.0% |
| ! | GATCAGTTGAATATCTAATA+AGG | + | tig0020490:88490-88509 | Msa1382160:intron | 25.0% |
| ! | TCAGTTGAATATCTAATAAG+GGG | + | tig0020490:88492-88511 | Msa1382160:intron | 25.0% |
| !!! | TGTTTTATTCTATCTGCTTT+TGG | + | tig0020490:88527-88546 | Msa1382160:intron | 25.0% |
| !! | TTTTCTCTTTATTGTGGATT+AGG | + | tig0020490:88577-88596 | Msa1382160:intron | 25.0% |
| ! | TATCTCTTGGATTGAAAATT+TGG | + | tig0020490:88672-88691 | Msa1382160:intron | 25.0% |
| ! | TGTTTCTTATTAAAGGGTTT+AGG | + | tig0020490:88789-88808 | Msa1382160:intron | 25.0% |
| ! | GAGATTTAACGATAAAGATA+AGG | + | tig0020490:88821-88840 | Msa1382160:intron | 25.0% |
| !!! | AAGAGAGGTTTTTTACTAAT+AGG | + | tig0020490:89112-89131 | Msa1382160:CDS | 25.0% |
| !! | TTTTACTAATAGGAAGCAAA+TGG | + | tig0020490:89122-89141 | Msa1382160:CDS | 25.0% |
| ! | TTTACTAATAGGAAGCAAAT+GGG | + | tig0020490:89123-89142 | Msa1382160:CDS | 25.0% |
| !! | GTCAAATTGGATAAACTTTT+AGG | - | tig0020490:90011-90030 | None:intergenic | 25.0% |
| AGGAAGATTTGATTATTGTG+TGG | - | tig0020490:87931-87950 | None:intergenic | 30.0% | |
| TTTGTTTGTGAGGAGAAAAA+TGG | - | tig0020490:87992-88011 | None:intergenic | 30.0% | |
| ACAAAGAAAGAGATAAAGAC+TGG | - | tig0020490:88029-88048 | None:intergenic | 30.0% | |
| ATGAGATTCAATTCAGTTGA+AGG | - | tig0020490:88077-88096 | None:intergenic | 30.0% | |
| CTTACAAGAAGCAAATAAAG+TGG | - | tig0020490:88116-88135 | None:intergenic | 30.0% | |
| CAAAAACACACAAAGAAACA+AGG | - | tig0020490:88169-88188 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAGACATGTGAAT+TGG | + | tig0020490:88335-88354 | Msa1382160:intron | 30.0% |
| !! | TTTTTGGAGACATGTGAATT+GGG | + | tig0020490:88336-88355 | Msa1382160:intron | 30.0% |
| ! | TGAATTGGGTTATTTGCTTT+TGG | + | tig0020490:88350-88369 | Msa1382160:intron | 30.0% |
| !!! | GTGCTTTTTTCTCTTTATTG+TGG | + | tig0020490:88571-88590 | Msa1382160:intron | 30.0% |
| !! | CTTTATTGTGGATTAGGATT+TGG | + | tig0020490:88583-88602 | Msa1382160:intron | 30.0% |
| TGGAATAGATTCTTATCTCT+TGG | + | tig0020490:88659-88678 | Msa1382160:intron | 30.0% | |
| TATGCAAATACAAAAAGCCA+AGG | - | tig0020490:89159-89178 | None:intergenic | 30.0% | |
| TTTGCATATCATAAGTGTAC+TGG | + | tig0020490:89171-89190 | Msa1382160:CDS | 30.0% | |
| !! | TTGATCTAACTCACTTTTCT+TGG | + | tig0020490:89214-89233 | Msa1382160:CDS | 30.0% |
| GATTGTCAAATTTATGTCGT+AGG | + | tig0020490:89882-89901 | Msa1382160:CDS | 30.0% | |
| AGGAAGATTTGATTATTGTG+TGG | - | tig0020490:87931-87950 | None:intergenic | 30.0% | |
| TTTGTTTGTGAGGAGAAAAA+TGG | - | tig0020490:87992-88011 | None:intergenic | 30.0% | |
| ACAAAGAAAGAGATAAAGAC+TGG | - | tig0020490:88029-88048 | None:intergenic | 30.0% | |
| ATGAGATTCAATTCAGTTGA+AGG | - | tig0020490:88077-88096 | None:intergenic | 30.0% | |
| CTTACAAGAAGCAAATAAAG+TGG | - | tig0020490:88116-88135 | None:intergenic | 30.0% | |
| CAAAAACACACAAAGAAACA+AGG | - | tig0020490:88169-88188 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGAGACATGTGAAT+TGG | + | tig0020490:88335-88354 | Msa1382160:intron | 30.0% |
| !! | TTTTTGGAGACATGTGAATT+GGG | + | tig0020490:88336-88355 | Msa1382160:intron | 30.0% |
| ! | TGAATTGGGTTATTTGCTTT+TGG | + | tig0020490:88350-88369 | Msa1382160:intron | 30.0% |
| !!! | GTGCTTTTTTCTCTTTATTG+TGG | + | tig0020490:88571-88590 | Msa1382160:intron | 30.0% |
| !! | CTTTATTGTGGATTAGGATT+TGG | + | tig0020490:88583-88602 | Msa1382160:intron | 30.0% |
| TGGAATAGATTCTTATCTCT+TGG | + | tig0020490:88659-88678 | Msa1382160:intron | 30.0% | |
| TATGCAAATACAAAAAGCCA+AGG | - | tig0020490:89159-89178 | None:intergenic | 30.0% | |
| TTTGCATATCATAAGTGTAC+TGG | + | tig0020490:89171-89190 | Msa1382160:CDS | 30.0% | |
| !! | TTGATCTAACTCACTTTTCT+TGG | + | tig0020490:89214-89233 | Msa1382160:CDS | 30.0% |
| GATTGTCAAATTTATGTCGT+AGG | + | tig0020490:89882-89901 | Msa1382160:CDS | 30.0% | |
| AAGCTAGTAGAGCAGATATA+AGG | - | tig0020490:87900-87919 | None:intergenic | 35.0% | |
| !!! | TGAAGACTGTTTTGTTTGTG+AGG | - | tig0020490:88002-88021 | None:intergenic | 35.0% |
| AGAAACAAGGTAAAGTGAAG+AGG | - | tig0020490:88156-88175 | None:intergenic | 35.0% | |
| !! | TATCTGCTTTTGGATCATTG+TGG | + | tig0020490:88537-88556 | Msa1382160:intron | 35.0% |
| AAATGTGAGTGTATCAGCTT+AGG | + | tig0020490:88630-88649 | Msa1382160:intron | 35.0% | |
| TGTATCAGCTTAGGAGAATT+TGG | + | tig0020490:88639-88658 | Msa1382160:intron | 35.0% | |
| CACTATGTTCTCAAATTGGT+TGG | - | tig0020490:88724-88743 | None:intergenic | 35.0% | |
| CAACCAATTTGAGAACATAG+TGG | + | tig0020490:88722-88741 | Msa1382160:intron | 35.0% | |
| CTTCCACTATGTTCTCAAAT+TGG | - | tig0020490:88728-88747 | None:intergenic | 35.0% | |
| CTTAGAGAATGATCTAACTC+TGG | - | tig0020490:88967-88986 | None:intergenic | 35.0% | |
| AAGAGAAGAACCCTTAATTC+CGG | + | tig0020490:88984-89003 | Msa1382160:CDS | 35.0% | |
| CAATTAAGAGCAACATCATC+AGG | - | tig0020490:89015-89034 | None:intergenic | 35.0% | |
| TAATTGTCTTCTTCGTCTTC+CGG | + | tig0020490:89029-89048 | Msa1382160:CDS | 35.0% | |
| TTCAAAGTCATTCATCCTGT+AGG | + | tig0020490:89052-89071 | Msa1382160:CDS | 35.0% | |
| TCAAAGTCATTCATCCTGTA+GGG | + | tig0020490:89053-89072 | Msa1382160:CDS | 35.0% | |
| ! | TGTTACTTGGTAGTAAAGAG+AGG | + | tig0020490:89097-89116 | Msa1382160:CDS | 35.0% |
| ! | AAATGGGTTTCAAAGATCCT+TGG | + | tig0020490:89139-89158 | Msa1382160:CDS | 35.0% |
| AGTGTACTGGAAAGATTCAA+TGG | + | tig0020490:89184-89203 | Msa1382160:CDS | 35.0% | |
| GATGGTAATCTTTACGTATG+CGG | + | tig0020490:89309-89328 | Msa1382160:CDS | 35.0% | |
| TATTTCAACACCAAGTCAAG+AGG | - | tig0020490:89360-89379 | None:intergenic | 35.0% | |
| ATGAGATCACGAAAAATCGT+TGG | + | tig0020490:89379-89398 | Msa1382160:CDS | 35.0% | |
| ACTGATCATTCGATTCATCA+CGG | - | tig0020490:89406-89425 | None:intergenic | 35.0% | |
| !! | TAGTACTGATCTTTATGAGC+TGG | + | tig0020490:89485-89504 | Msa1382160:CDS | 35.0% |
| TTGTAACAGAAGGATGGTTA+TGG | + | tig0020490:89613-89632 | Msa1382160:CDS | 35.0% | |
| GCTCAGAAACAACAAATAAG+TGG | - | tig0020490:89752-89771 | None:intergenic | 35.0% | |
| GAAGCTTAAGGTTTATAACC+AGG | + | tig0020490:89782-89801 | Msa1382160:CDS | 35.0% | |
| AAAGGTTTGCATATTTGCTC+AGG | - | tig0020490:89846-89865 | None:intergenic | 35.0% | |
| !!! | ACTTTCTTTTGGGTTCAGTA+TGG | - | tig0020490:89940-89959 | None:intergenic | 35.0% |
| AACCCAAAAGAAAGTTGTGA+GGG | + | tig0020490:89945-89964 | Msa1382160:CDS | 35.0% | |
| AATGGAACTTCAGTGTTCAA+TGG | + | tig0020490:89970-89989 | Msa1382160:CDS | 35.0% | |
| AAGCTAGTAGAGCAGATATA+AGG | - | tig0020490:87900-87919 | None:intergenic | 35.0% | |
| !!! | TGAAGACTGTTTTGTTTGTG+AGG | - | tig0020490:88002-88021 | None:intergenic | 35.0% |
| AGAAACAAGGTAAAGTGAAG+AGG | - | tig0020490:88156-88175 | None:intergenic | 35.0% | |
| !! | TATCTGCTTTTGGATCATTG+TGG | + | tig0020490:88537-88556 | Msa1382160:intron | 35.0% |
| AAATGTGAGTGTATCAGCTT+AGG | + | tig0020490:88630-88649 | Msa1382160:intron | 35.0% | |
| TGTATCAGCTTAGGAGAATT+TGG | + | tig0020490:88639-88658 | Msa1382160:intron | 35.0% | |
| CACTATGTTCTCAAATTGGT+TGG | - | tig0020490:88724-88743 | None:intergenic | 35.0% | |
| CAACCAATTTGAGAACATAG+TGG | + | tig0020490:88722-88741 | Msa1382160:intron | 35.0% | |
| CTTCCACTATGTTCTCAAAT+TGG | - | tig0020490:88728-88747 | None:intergenic | 35.0% | |
| CTTAGAGAATGATCTAACTC+TGG | - | tig0020490:88967-88986 | None:intergenic | 35.0% | |
| AAGAGAAGAACCCTTAATTC+CGG | + | tig0020490:88984-89003 | Msa1382160:CDS | 35.0% | |
| CAATTAAGAGCAACATCATC+AGG | - | tig0020490:89015-89034 | None:intergenic | 35.0% | |
| TAATTGTCTTCTTCGTCTTC+CGG | + | tig0020490:89029-89048 | Msa1382160:CDS | 35.0% | |
| TTCAAAGTCATTCATCCTGT+AGG | + | tig0020490:89052-89071 | Msa1382160:CDS | 35.0% | |
| TCAAAGTCATTCATCCTGTA+GGG | + | tig0020490:89053-89072 | Msa1382160:CDS | 35.0% | |
| ! | TGTTACTTGGTAGTAAAGAG+AGG | + | tig0020490:89097-89116 | Msa1382160:CDS | 35.0% |
| ! | AAATGGGTTTCAAAGATCCT+TGG | + | tig0020490:89139-89158 | Msa1382160:CDS | 35.0% |
| AGTGTACTGGAAAGATTCAA+TGG | + | tig0020490:89184-89203 | Msa1382160:CDS | 35.0% | |
| GATGGTAATCTTTACGTATG+CGG | + | tig0020490:89309-89328 | Msa1382160:CDS | 35.0% | |
| TATTTCAACACCAAGTCAAG+AGG | - | tig0020490:89360-89379 | None:intergenic | 35.0% | |
| ATGAGATCACGAAAAATCGT+TGG | + | tig0020490:89379-89398 | Msa1382160:CDS | 35.0% | |
| ACTGATCATTCGATTCATCA+CGG | - | tig0020490:89406-89425 | None:intergenic | 35.0% | |
| !! | TAGTACTGATCTTTATGAGC+TGG | + | tig0020490:89485-89504 | Msa1382160:CDS | 35.0% |
| TTGTAACAGAAGGATGGTTA+TGG | + | tig0020490:89613-89632 | Msa1382160:CDS | 35.0% | |
| GCTCAGAAACAACAAATAAG+TGG | - | tig0020490:89752-89771 | None:intergenic | 35.0% | |
| GAAGCTTAAGGTTTATAACC+AGG | + | tig0020490:89782-89801 | Msa1382160:CDS | 35.0% | |
| AAAGGTTTGCATATTTGCTC+AGG | - | tig0020490:89846-89865 | None:intergenic | 35.0% | |
| !!! | ACTTTCTTTTGGGTTCAGTA+TGG | - | tig0020490:89940-89959 | None:intergenic | 35.0% |
| AACCCAAAAGAAAGTTGTGA+GGG | + | tig0020490:89945-89964 | Msa1382160:CDS | 35.0% | |
| AATGGAACTTCAGTGTTCAA+TGG | + | tig0020490:89970-89989 | Msa1382160:CDS | 35.0% | |
| !! | CTAGCTTTTTACGAAGTAGC+AGG | + | tig0020490:88424-88443 | Msa1382160:intron | 40.0% |
| ! | ATTTTCGTCTCAACAAGCAC+CGG | + | tig0020490:88858-88877 | Msa1382160:CDS | 40.0% |
| !! | TTGGGAGATAGTGTCATTTG+AGG | - | tig0020490:88901-88920 | None:intergenic | 40.0% |
| TGACACTATCTCCCAAGTTT+AGG | + | tig0020490:88905-88924 | Msa1382160:CDS | 40.0% | |
| ! | ATCTCCCAAGTTTAGGTTAG+CGG | + | tig0020490:88912-88931 | Msa1382160:CDS | 40.0% |
| GAATGATCTAACTCTGGCAT+CGG | - | tig0020490:88961-88980 | None:intergenic | 40.0% | |
| AGAGAAGAACCCTTAATTCC+GGG | + | tig0020490:88985-89004 | Msa1382160:CDS | 40.0% | |
| CAGGATGAATGACTTTGAAC+CGG | - | tig0020490:89051-89070 | None:intergenic | 40.0% | |
| AAGAGGTGGCATATGTTACT+TGG | + | tig0020490:89084-89103 | Msa1382160:CDS | 40.0% | |
| TACTGGAAAGATTCAATGGC+AGG | + | tig0020490:89188-89207 | Msa1382160:CDS | 40.0% | |
| ! | AGGTTTGTCCTCATGGTTTT+CGG | + | tig0020490:89268-89287 | Msa1382160:CDS | 40.0% |
| ACGTAAAGATTACCATCGTG+AGG | - | tig0020490:89306-89325 | None:intergenic | 40.0% | |
| TGAATCGAATGATCAGTGCT+AGG | + | tig0020490:89409-89428 | Msa1382160:CDS | 40.0% | |
| ! | GAGGTATTAGATCCGATTAG+CGG | + | tig0020490:89516-89535 | Msa1382160:CDS | 40.0% |
| AGGTATTAGATCCGATTAGC+GGG | + | tig0020490:89517-89536 | Msa1382160:CDS | 40.0% | |
| AGCATCATAGGATGCCATAT+TGG | - | tig0020490:89571-89590 | None:intergenic | 40.0% | |
| !! | TATGATGCTGCAGTTCTGAA+CGG | + | tig0020490:89582-89601 | Msa1382160:CDS | 40.0% |
| AACTGCTTGTAACAGAAGGA+TGG | + | tig0020490:89607-89626 | Msa1382160:CDS | 40.0% | |
| ! | CCTCTAGGAGAGACATAAAA+AGG | - | tig0020490:89639-89658 | None:intergenic | 40.0% |
| ! | CCTTTTTATGTCTCTCCTAG+AGG | + | tig0020490:89636-89655 | Msa1382160:CDS | 40.0% |
| AACCAATAGCTGGGAAACTA+TGG | + | tig0020490:89677-89696 | Msa1382160:CDS | 40.0% | |
| GCTCGAAAGAATGAAGCTTA+AGG | + | tig0020490:89770-89789 | Msa1382160:CDS | 40.0% | |
| TGCATATTTGCTCAGGCAAA+GGG | - | tig0020490:89839-89858 | None:intergenic | 40.0% | |
| TTGCATATTTGCTCAGGCAA+AGG | - | tig0020490:89840-89859 | None:intergenic | 40.0% | |
| TCACAAGCATTCACAGCAAA+AGG | - | tig0020490:89864-89883 | None:intergenic | 40.0% | |
| GTCAAATTTATGTCGTAGGC+CGG | + | tig0020490:89886-89905 | Msa1382160:CDS | 40.0% | |
| GAACCCAAAAGAAAGTTGTG+AGG | + | tig0020490:89944-89963 | Msa1382160:CDS | 40.0% | |
| ACCCAAAAGAAAGTTGTGAG+GGG | + | tig0020490:89946-89965 | Msa1382160:CDS | 40.0% | |
| ! | TCCCCTCACAACTTTCTTTT+GGG | - | tig0020490:89950-89969 | None:intergenic | 40.0% |
| ! | TTCCCCTCACAACTTTCTTT+TGG | - | tig0020490:89951-89970 | None:intergenic | 40.0% |
| AAGAAAGTTGTGAGGGGAAA+TGG | + | tig0020490:89952-89971 | Msa1382160:CDS | 40.0% | |
| !! | CTAGCTTTTTACGAAGTAGC+AGG | + | tig0020490:88424-88443 | Msa1382160:intron | 40.0% |
| ! | ATTTTCGTCTCAACAAGCAC+CGG | + | tig0020490:88858-88877 | Msa1382160:CDS | 40.0% |
| !! | TTGGGAGATAGTGTCATTTG+AGG | - | tig0020490:88901-88920 | None:intergenic | 40.0% |
| TGACACTATCTCCCAAGTTT+AGG | + | tig0020490:88905-88924 | Msa1382160:CDS | 40.0% | |
| ! | ATCTCCCAAGTTTAGGTTAG+CGG | + | tig0020490:88912-88931 | Msa1382160:CDS | 40.0% |
| GAATGATCTAACTCTGGCAT+CGG | - | tig0020490:88961-88980 | None:intergenic | 40.0% | |
| AGAGAAGAACCCTTAATTCC+GGG | + | tig0020490:88985-89004 | Msa1382160:CDS | 40.0% | |
| CAGGATGAATGACTTTGAAC+CGG | - | tig0020490:89051-89070 | None:intergenic | 40.0% | |
| AAGAGGTGGCATATGTTACT+TGG | + | tig0020490:89084-89103 | Msa1382160:CDS | 40.0% | |
| TACTGGAAAGATTCAATGGC+AGG | + | tig0020490:89188-89207 | Msa1382160:CDS | 40.0% | |
| ! | AGGTTTGTCCTCATGGTTTT+CGG | + | tig0020490:89268-89287 | Msa1382160:CDS | 40.0% |
| ACGTAAAGATTACCATCGTG+AGG | - | tig0020490:89306-89325 | None:intergenic | 40.0% | |
| TGAATCGAATGATCAGTGCT+AGG | + | tig0020490:89409-89428 | Msa1382160:CDS | 40.0% | |
| ! | GAGGTATTAGATCCGATTAG+CGG | + | tig0020490:89516-89535 | Msa1382160:CDS | 40.0% |
| AGGTATTAGATCCGATTAGC+GGG | + | tig0020490:89517-89536 | Msa1382160:CDS | 40.0% | |
| AGCATCATAGGATGCCATAT+TGG | - | tig0020490:89571-89590 | None:intergenic | 40.0% | |
| !! | TATGATGCTGCAGTTCTGAA+CGG | + | tig0020490:89582-89601 | Msa1382160:CDS | 40.0% |
| AACTGCTTGTAACAGAAGGA+TGG | + | tig0020490:89607-89626 | Msa1382160:CDS | 40.0% | |
| ! | CCTCTAGGAGAGACATAAAA+AGG | - | tig0020490:89639-89658 | None:intergenic | 40.0% |
| ! | CCTTTTTATGTCTCTCCTAG+AGG | + | tig0020490:89636-89655 | Msa1382160:CDS | 40.0% |
| AACCAATAGCTGGGAAACTA+TGG | + | tig0020490:89677-89696 | Msa1382160:CDS | 40.0% | |
| GCTCGAAAGAATGAAGCTTA+AGG | + | tig0020490:89770-89789 | Msa1382160:CDS | 40.0% | |
| TGCATATTTGCTCAGGCAAA+GGG | - | tig0020490:89839-89858 | None:intergenic | 40.0% | |
| TTGCATATTTGCTCAGGCAA+AGG | - | tig0020490:89840-89859 | None:intergenic | 40.0% | |
| TCACAAGCATTCACAGCAAA+AGG | - | tig0020490:89864-89883 | None:intergenic | 40.0% | |
| GTCAAATTTATGTCGTAGGC+CGG | + | tig0020490:89886-89905 | Msa1382160:CDS | 40.0% | |
| GAACCCAAAAGAAAGTTGTG+AGG | + | tig0020490:89944-89963 | Msa1382160:CDS | 40.0% | |
| ACCCAAAAGAAAGTTGTGAG+GGG | + | tig0020490:89946-89965 | Msa1382160:CDS | 40.0% | |
| ! | TCCCCTCACAACTTTCTTTT+GGG | - | tig0020490:89950-89969 | None:intergenic | 40.0% |
| ! | TTCCCCTCACAACTTTCTTT+TGG | - | tig0020490:89951-89970 | None:intergenic | 40.0% |
| AAGAAAGTTGTGAGGGGAAA+TGG | + | tig0020490:89952-89971 | Msa1382160:CDS | 40.0% | |
| !!! | GCTTCTGGGGTGTTGTTTTT+TGG | + | tig0020490:88320-88339 | Msa1382160:intron | 45.0% |
| !! | CTGCTTTTGGATCATTGTGG+AGG | + | tig0020490:88540-88559 | Msa1382160:intron | 45.0% |
| ! | CTTTTGGATCATTGTGGAGG+AGG | + | tig0020490:88543-88562 | Msa1382160:intron | 45.0% |
| GATCATTGTGGAGGAGGAAT+TGG | + | tig0020490:88549-88568 | Msa1382160:intron | 45.0% | |
| ACCACCGCTAACCTAAACTT+GGG | - | tig0020490:88919-88938 | None:intergenic | 45.0% | |
| AACCACCGCTAACCTAAACT+TGG | - | tig0020490:88920-88939 | None:intergenic | 45.0% | |
| TCAGGTAAGCCCGGAATTAA+GGG | - | tig0020490:88997-89016 | None:intergenic | 45.0% | |
| ATCAGGTAAGCCCGGAATTA+AGG | - | tig0020490:88998-89017 | None:intergenic | 45.0% | |
| AAGGACAAGGTTTGTCCTCA+TGG | + | tig0020490:89261-89280 | Msa1382160:CDS | 45.0% | |
| GAAACACACCGAAAACCATG+AGG | - | tig0020490:89279-89298 | None:intergenic | 45.0% | |
| GGTAATCTTTACGTATGCGG+TGG | + | tig0020490:89312-89331 | Msa1382160:CDS | 45.0% | |
| !!! | GCTAGGTCATTTTTTGCCAG+TGG | + | tig0020490:89426-89445 | Msa1382160:CDS | 45.0% |
| TTTGCCAGTGGAGTAATCGA+TGG | + | tig0020490:89438-89457 | Msa1382160:CDS | 45.0% | |
| TTGCCAGTGGAGTAATCGAT+GGG | + | tig0020490:89439-89458 | Msa1382160:CDS | 45.0% | |
| ATGGGATGGTTTATGCAGCT+GGG | + | tig0020490:89457-89476 | Msa1382160:CDS | 45.0% | |
| TTATGAGCTGGATTCAGCTG+AGG | + | tig0020490:89497-89516 | Msa1382160:CDS | 45.0% | |
| TAGATCCGATTAGCGGGAAT+TGG | + | tig0020490:89523-89542 | Msa1382160:CDS | 45.0% | |
| TGCCAACATGGGAACCAATA+TGG | + | tig0020490:89554-89573 | Msa1382160:CDS | 45.0% | |
| !! | TGCCATATTGGTTCCCATGT+TGG | - | tig0020490:89559-89578 | None:intergenic | 45.0% |
| GTTCAGAACTGCAGCATCAT+AGG | - | tig0020490:89583-89602 | None:intergenic | 45.0% | |
| !! | ATGATGCTGCAGTTCTGAAC+GGG | + | tig0020490:89583-89602 | Msa1382160:CDS | 45.0% |
| GGGAAACTGCTTGTAACAGA+AGG | + | tig0020490:89603-89622 | Msa1382160:CDS | 45.0% | |
| TTATGTCTCTCCTAGAGGAC+AGG | + | tig0020490:89641-89660 | Msa1382160:CDS | 45.0% | |
| !! | GTTTCCCAGCTATTGGTTCT+CGG | - | tig0020490:89675-89694 | None:intergenic | 45.0% |
| AGCCATAGTTTCCCAGCTAT+TGG | - | tig0020490:89682-89701 | None:intergenic | 45.0% | |
| ATGGCTGTTGGACTTAGAGA+AGG | + | tig0020490:89696-89715 | Msa1382160:CDS | 45.0% | |
| TGGCTGTTGGACTTAGAGAA+GGG | + | tig0020490:89697-89716 | Msa1382160:CDS | 45.0% | |
| GGTTCAAGCGTGGTTGTTTA+TGG | + | tig0020490:89726-89745 | Msa1382160:CDS | 45.0% | |
| ATCTATGGCTTCCCAGGAAT+CGG | - | tig0020490:89811-89830 | None:intergenic | 45.0% | |
| GCATATTTGCTCAGGCAAAG+GGG | - | tig0020490:89838-89857 | None:intergenic | 45.0% | |
| CAACAGCAACCAGAAGATTC+CGG | - | tig0020490:89908-89927 | None:intergenic | 45.0% | |
| AGAGCTTGAAGGGGTCAAAT+TGG | - | tig0020490:90024-90043 | None:intergenic | 45.0% | |
| ATAGCACCTGAGAGCTTGAA+GGG | - | tig0020490:90034-90053 | None:intergenic | 45.0% | |
| AATAGCACCTGAGAGCTTGA+AGG | - | tig0020490:90035-90054 | None:intergenic | 45.0% | |
| !!! | GCTTCTGGGGTGTTGTTTTT+TGG | + | tig0020490:88320-88339 | Msa1382160:intron | 45.0% |
| !! | CTGCTTTTGGATCATTGTGG+AGG | + | tig0020490:88540-88559 | Msa1382160:intron | 45.0% |
| ! | CTTTTGGATCATTGTGGAGG+AGG | + | tig0020490:88543-88562 | Msa1382160:intron | 45.0% |
| GATCATTGTGGAGGAGGAAT+TGG | + | tig0020490:88549-88568 | Msa1382160:intron | 45.0% | |
| ACCACCGCTAACCTAAACTT+GGG | - | tig0020490:88919-88938 | None:intergenic | 45.0% | |
| AACCACCGCTAACCTAAACT+TGG | - | tig0020490:88920-88939 | None:intergenic | 45.0% | |
| TCAGGTAAGCCCGGAATTAA+GGG | - | tig0020490:88997-89016 | None:intergenic | 45.0% | |
| ATCAGGTAAGCCCGGAATTA+AGG | - | tig0020490:88998-89017 | None:intergenic | 45.0% | |
| AAGGACAAGGTTTGTCCTCA+TGG | + | tig0020490:89261-89280 | Msa1382160:CDS | 45.0% | |
| GAAACACACCGAAAACCATG+AGG | - | tig0020490:89279-89298 | None:intergenic | 45.0% | |
| GGTAATCTTTACGTATGCGG+TGG | + | tig0020490:89312-89331 | Msa1382160:CDS | 45.0% | |
| !!! | GCTAGGTCATTTTTTGCCAG+TGG | + | tig0020490:89426-89445 | Msa1382160:CDS | 45.0% |
| TTTGCCAGTGGAGTAATCGA+TGG | + | tig0020490:89438-89457 | Msa1382160:CDS | 45.0% | |
| TTGCCAGTGGAGTAATCGAT+GGG | + | tig0020490:89439-89458 | Msa1382160:CDS | 45.0% | |
| ATGGGATGGTTTATGCAGCT+GGG | + | tig0020490:89457-89476 | Msa1382160:CDS | 45.0% | |
| TTATGAGCTGGATTCAGCTG+AGG | + | tig0020490:89497-89516 | Msa1382160:CDS | 45.0% | |
| TAGATCCGATTAGCGGGAAT+TGG | + | tig0020490:89523-89542 | Msa1382160:CDS | 45.0% | |
| TGCCAACATGGGAACCAATA+TGG | + | tig0020490:89554-89573 | Msa1382160:CDS | 45.0% | |
| !! | TGCCATATTGGTTCCCATGT+TGG | - | tig0020490:89559-89578 | None:intergenic | 45.0% |
| GTTCAGAACTGCAGCATCAT+AGG | - | tig0020490:89583-89602 | None:intergenic | 45.0% | |
| !! | ATGATGCTGCAGTTCTGAAC+GGG | + | tig0020490:89583-89602 | Msa1382160:CDS | 45.0% |
| GGGAAACTGCTTGTAACAGA+AGG | + | tig0020490:89603-89622 | Msa1382160:CDS | 45.0% | |
| TTATGTCTCTCCTAGAGGAC+AGG | + | tig0020490:89641-89660 | Msa1382160:CDS | 45.0% | |
| !! | GTTTCCCAGCTATTGGTTCT+CGG | - | tig0020490:89675-89694 | None:intergenic | 45.0% |
| AGCCATAGTTTCCCAGCTAT+TGG | - | tig0020490:89682-89701 | None:intergenic | 45.0% | |
| ATGGCTGTTGGACTTAGAGA+AGG | + | tig0020490:89696-89715 | Msa1382160:CDS | 45.0% | |
| TGGCTGTTGGACTTAGAGAA+GGG | + | tig0020490:89697-89716 | Msa1382160:CDS | 45.0% | |
| GGTTCAAGCGTGGTTGTTTA+TGG | + | tig0020490:89726-89745 | Msa1382160:CDS | 45.0% | |
| ATCTATGGCTTCCCAGGAAT+CGG | - | tig0020490:89811-89830 | None:intergenic | 45.0% | |
| GCATATTTGCTCAGGCAAAG+GGG | - | tig0020490:89838-89857 | None:intergenic | 45.0% | |
| CAACAGCAACCAGAAGATTC+CGG | - | tig0020490:89908-89927 | None:intergenic | 45.0% | |
| AGAGCTTGAAGGGGTCAAAT+TGG | - | tig0020490:90024-90043 | None:intergenic | 45.0% | |
| ATAGCACCTGAGAGCTTGAA+GGG | - | tig0020490:90034-90053 | None:intergenic | 45.0% | |
| AATAGCACCTGAGAGCTTGA+AGG | - | tig0020490:90035-90054 | None:intergenic | 45.0% | |
| ! | GGATCACCTAGCTTGTGAAC+CGG | - | tig0020490:88880-88899 | None:intergenic | 50.0% |
| ! | TCCCAAGTTTAGGTTAGCGG+TGG | + | tig0020490:88915-88934 | Msa1382160:CDS | 50.0% |
| GCAACATCATCAGGTAAGCC+CGG | - | tig0020490:89006-89025 | None:intergenic | 50.0% | |
| !! | TGTCCTTGCAAGGCATTGCA+GGG | - | tig0020490:89248-89267 | None:intergenic | 50.0% |
| !! | TTGTCCTTGCAAGGCATTGC+AGG | - | tig0020490:89249-89268 | None:intergenic | 50.0% |
| TGCAATGCCTTGCAAGGACA+AGG | + | tig0020490:89248-89267 | Msa1382160:CDS | 50.0% | |
| GGACAAACCTTGTCCTTGCA+AGG | - | tig0020490:89258-89277 | None:intergenic | 50.0% | |
| TGTGTTTCGATGCCTCACGA+TGG | + | tig0020490:89291-89310 | Msa1382160:CDS | 50.0% | |
| TCTTTACGTATGCGGTGGCA+TGG | + | tig0020490:89317-89336 | Msa1382160:CDS | 50.0% | |
| ! | CGTGGATTGTCCTCTTGACT+TGG | + | tig0020490:89347-89366 | Msa1382160:CDS | 50.0% |
| ! | CATCCCATCGATTACTCCAC+TGG | - | tig0020490:89445-89464 | None:intergenic | 50.0% |
| CAGTGGAGTAATCGATGGGA+TGG | + | tig0020490:89443-89462 | Msa1382160:CDS | 50.0% | |
| GATGGGATGGTTTATGCAGC+TGG | + | tig0020490:89456-89475 | Msa1382160:CDS | 50.0% | |
| TGGGATGGTTTATGCAGCTG+GGG | + | tig0020490:89458-89477 | Msa1382160:CDS | 50.0% | |
| ACGATCCGAGAACCAATAGC+TGG | + | tig0020490:89667-89686 | Msa1382160:CDS | 50.0% | |
| CGATCCGAGAACCAATAGCT+GGG | + | tig0020490:89668-89687 | Msa1382160:CDS | 50.0% | |
| AGCTGGGAAACTATGGCTGT+TGG | + | tig0020490:89684-89703 | Msa1382160:CDS | 50.0% | |
| CTGTTGGACTTAGAGAAGGG+TGG | + | tig0020490:89700-89719 | Msa1382160:CDS | 50.0% | |
| ! | ATAACCAGGAAGCCGATTCC+TGG | + | tig0020490:89796-89815 | Msa1382160:CDS | 50.0% |
| ! | TAACCAGGAAGCCGATTCCT+GGG | + | tig0020490:89797-89816 | Msa1382160:CDS | 50.0% |
| GATTCCTGGGAAGCCATAGA+TGG | + | tig0020490:89810-89829 | Msa1382160:CDS | 50.0% | |
| ! | CGGAATCTTCTGGTTGCTGT+TGG | + | tig0020490:89906-89925 | Msa1382160:CDS | 50.0% |
| TTTGACCCCTTCAAGCTCTC+AGG | + | tig0020490:90025-90044 | Msa1382160:CDS | 50.0% | |
| TAGCACCTGAGAGCTTGAAG+GGG | - | tig0020490:90033-90052 | None:intergenic | 50.0% | |
| ! | GGATCACCTAGCTTGTGAAC+CGG | - | tig0020490:88880-88899 | None:intergenic | 50.0% |
| ! | TCCCAAGTTTAGGTTAGCGG+TGG | + | tig0020490:88915-88934 | Msa1382160:CDS | 50.0% |
| GCAACATCATCAGGTAAGCC+CGG | - | tig0020490:89006-89025 | None:intergenic | 50.0% | |
| !! | TGTCCTTGCAAGGCATTGCA+GGG | - | tig0020490:89248-89267 | None:intergenic | 50.0% |
| !! | TTGTCCTTGCAAGGCATTGC+AGG | - | tig0020490:89249-89268 | None:intergenic | 50.0% |
| TGCAATGCCTTGCAAGGACA+AGG | + | tig0020490:89248-89267 | Msa1382160:CDS | 50.0% | |
| GGACAAACCTTGTCCTTGCA+AGG | - | tig0020490:89258-89277 | None:intergenic | 50.0% | |
| TGTGTTTCGATGCCTCACGA+TGG | + | tig0020490:89291-89310 | Msa1382160:CDS | 50.0% | |
| TCTTTACGTATGCGGTGGCA+TGG | + | tig0020490:89317-89336 | Msa1382160:CDS | 50.0% | |
| ! | CGTGGATTGTCCTCTTGACT+TGG | + | tig0020490:89347-89366 | Msa1382160:CDS | 50.0% |
| ! | CATCCCATCGATTACTCCAC+TGG | - | tig0020490:89445-89464 | None:intergenic | 50.0% |
| CAGTGGAGTAATCGATGGGA+TGG | + | tig0020490:89443-89462 | Msa1382160:CDS | 50.0% | |
| GATGGGATGGTTTATGCAGC+TGG | + | tig0020490:89456-89475 | Msa1382160:CDS | 50.0% | |
| TGGGATGGTTTATGCAGCTG+GGG | + | tig0020490:89458-89477 | Msa1382160:CDS | 50.0% | |
| ACGATCCGAGAACCAATAGC+TGG | + | tig0020490:89667-89686 | Msa1382160:CDS | 50.0% | |
| CGATCCGAGAACCAATAGCT+GGG | + | tig0020490:89668-89687 | Msa1382160:CDS | 50.0% | |
| AGCTGGGAAACTATGGCTGT+TGG | + | tig0020490:89684-89703 | Msa1382160:CDS | 50.0% | |
| CTGTTGGACTTAGAGAAGGG+TGG | + | tig0020490:89700-89719 | Msa1382160:CDS | 50.0% | |
| ! | ATAACCAGGAAGCCGATTCC+TGG | + | tig0020490:89796-89815 | Msa1382160:CDS | 50.0% |
| ! | TAACCAGGAAGCCGATTCCT+GGG | + | tig0020490:89797-89816 | Msa1382160:CDS | 50.0% |
| GATTCCTGGGAAGCCATAGA+TGG | + | tig0020490:89810-89829 | Msa1382160:CDS | 50.0% | |
| ! | CGGAATCTTCTGGTTGCTGT+TGG | + | tig0020490:89906-89925 | Msa1382160:CDS | 50.0% |
| TTTGACCCCTTCAAGCTCTC+AGG | + | tig0020490:90025-90044 | Msa1382160:CDS | 50.0% | |
| TAGCACCTGAGAGCTTGAAG+GGG | - | tig0020490:90033-90052 | None:intergenic | 50.0% | |
| !! | CAAGCACCGGTTCACAAGCT+AGG | + | tig0020490:88871-88890 | Msa1382160:CDS | 55.0% |
| !! | CTTGCAAGGCATTGCAGGGA+TGG | - | tig0020490:89244-89263 | None:intergenic | 55.0% |
| CATCCCTGCAATGCCTTGCA+AGG | + | tig0020490:89242-89261 | Msa1382160:CDS | 55.0% | |
| GGGATGGTTTATGCAGCTGG+GGG | + | tig0020490:89459-89478 | Msa1382160:CDS | 55.0% | |
| GGATGGTTTATGCAGCTGGG+GGG | + | tig0020490:89460-89479 | Msa1382160:CDS | 55.0% | |
| TTGGCGCGCTATTGCCAACA+TGG | + | tig0020490:89542-89561 | Msa1382160:CDS | 55.0% | |
| TGGCGCGCTATTGCCAACAT+GGG | + | tig0020490:89543-89562 | Msa1382160:CDS | 55.0% | |
| GGATCGTAGACCTGTCCTCT+AGG | - | tig0020490:89654-89673 | None:intergenic | 55.0% | |
| GGACTTAGAGAAGGGTGGAC+TGG | + | tig0020490:89705-89724 | Msa1382160:CDS | 55.0% | |
| AGGCAAAGGGGAGCCATCTA+TGG | - | tig0020490:89826-89845 | None:intergenic | 55.0% | |
| TGTCGTAGGCCGGAATCTTC+TGG | + | tig0020490:89896-89915 | Msa1382160:CDS | 55.0% | |
| !! | CAAGCACCGGTTCACAAGCT+AGG | + | tig0020490:88871-88890 | Msa1382160:CDS | 55.0% |
| !! | CTTGCAAGGCATTGCAGGGA+TGG | - | tig0020490:89244-89263 | None:intergenic | 55.0% |
| CATCCCTGCAATGCCTTGCA+AGG | + | tig0020490:89242-89261 | Msa1382160:CDS | 55.0% | |
| GGGATGGTTTATGCAGCTGG+GGG | + | tig0020490:89459-89478 | Msa1382160:CDS | 55.0% | |
| GGATGGTTTATGCAGCTGGG+GGG | + | tig0020490:89460-89479 | Msa1382160:CDS | 55.0% | |
| TTGGCGCGCTATTGCCAACA+TGG | + | tig0020490:89542-89561 | Msa1382160:CDS | 55.0% | |
| TGGCGCGCTATTGCCAACAT+GGG | + | tig0020490:89543-89562 | Msa1382160:CDS | 55.0% | |
| GGATCGTAGACCTGTCCTCT+AGG | - | tig0020490:89654-89673 | None:intergenic | 55.0% | |
| GGACTTAGAGAAGGGTGGAC+TGG | + | tig0020490:89705-89724 | Msa1382160:CDS | 55.0% | |
| AGGCAAAGGGGAGCCATCTA+TGG | - | tig0020490:89826-89845 | None:intergenic | 55.0% | |
| TGTCGTAGGCCGGAATCTTC+TGG | + | tig0020490:89896-89915 | Msa1382160:CDS | 55.0% | |
| CCTCTTGCAGACAGCCCTAC+AGG | - | tig0020490:89070-89089 | None:intergenic | 60.0% | |
| CCTGTAGGGCTGTCTGCAAG+AGG | + | tig0020490:89067-89086 | Msa1382160:CDS | 60.0% | |
| GTAGGGCTGTCTGCAAGAGG+TGG | + | tig0020490:89070-89089 | Msa1382160:CDS | 60.0% | |
| GCGCGCCAATTCCCGCTAAT+CGG | - | tig0020490:89531-89550 | None:intergenic | 60.0% | |
| !! | AGGGTGGACTGGTTCAAGCG+TGG | + | tig0020490:89716-89735 | Msa1382160:CDS | 60.0% |
| ! | CTTCCCAGGAATCGGCTTCC+TGG | - | tig0020490:89803-89822 | None:intergenic | 60.0% |
| GGAGCCATCTATGGCTTCCC+AGG | - | tig0020490:89817-89836 | None:intergenic | 60.0% | |
| CCTCTTGCAGACAGCCCTAC+AGG | - | tig0020490:89070-89089 | None:intergenic | 60.0% | |
| CCTGTAGGGCTGTCTGCAAG+AGG | + | tig0020490:89067-89086 | Msa1382160:CDS | 60.0% | |
| GTAGGGCTGTCTGCAAGAGG+TGG | + | tig0020490:89070-89089 | Msa1382160:CDS | 60.0% | |
| GCGCGCCAATTCCCGCTAAT+CGG | - | tig0020490:89531-89550 | None:intergenic | 60.0% | |
| !! | AGGGTGGACTGGTTCAAGCG+TGG | + | tig0020490:89716-89735 | Msa1382160:CDS | 60.0% |
| ! | CTTCCCAGGAATCGGCTTCC+TGG | - | tig0020490:89803-89822 | None:intergenic | 60.0% |
| GGAGCCATCTATGGCTTCCC+AGG | - | tig0020490:89817-89836 | None:intergenic | 60.0% | |
| CGGTGGCATGGTCTCTGACG+TGG | + | tig0020490:89329-89348 | Msa1382160:CDS | 65.0% | |
| CGGTGGCATGGTCTCTGACG+TGG | + | tig0020490:89329-89348 | Msa1382160:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020490 | gene | 87879 | 90061 | 87879 | ID=Msa1382160;Name=Msa1382160 |
| tig0020490 | mRNA | 87879 | 90061 | 87879 | ID=Msa1382160-mRNA-1;Parent=Msa1382160;Name=Msa1382160-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.75|1|1|4|0|419 |
| tig0020490 | exon | 87879 | 87887 | 87879 | ID=Msa1382160-mRNA-1:exon:7932;Parent=Msa1382160-mRNA-1 |
| tig0020490 | exon | 88599 | 88604 | 88599 | ID=Msa1382160-mRNA-1:exon:7933;Parent=Msa1382160-mRNA-1 |
| tig0020490 | exon | 88804 | 88810 | 88804 | ID=Msa1382160-mRNA-1:exon:7934;Parent=Msa1382160-mRNA-1 |
| tig0020490 | exon | 88824 | 90061 | 88824 | ID=Msa1382160-mRNA-1:exon:7935;Parent=Msa1382160-mRNA-1 |
| tig0020490 | CDS | 87879 | 87887 | 87879 | ID=Msa1382160-mRNA-1:cds;Parent=Msa1382160-mRNA-1 |
| tig0020490 | CDS | 88599 | 88604 | 88599 | ID=Msa1382160-mRNA-1:cds;Parent=Msa1382160-mRNA-1 |
| tig0020490 | CDS | 88804 | 88810 | 88804 | ID=Msa1382160-mRNA-1:cds;Parent=Msa1382160-mRNA-1 |
| tig0020490 | CDS | 88824 | 90061 | 88824 | ID=Msa1382160-mRNA-1:cds;Parent=Msa1382160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
