Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086130 | XP_003592089.1 | 97.166 | 247 | 3 | 1 | 1 | 247 | 1 | 243 | 8.90e-170 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086130 | sp|P42777|GBF4_ARATH | 49.153 | 236 | 85 | 8 | 19 | 247 | 63 | 270 | 5.88e-53 | 175 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086130 | G7IBY6 | 97.166 | 247 | 3 | 1 | 1 | 247 | 1 | 243 | 4.25e-170 | 478 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0086130 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038260 | Msa0086130 | 0.828894 | 6.974977e-55 | -8.615850e-47 |
| Msa0064380 | Msa0086130 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
| Msa0086130 | Msa0123560 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0086130 | Msa0132490 | 0.870441 | 1.456011e-66 | -8.615850e-47 |
| Msa0086130 | Msa0191940 | 0.822461 | 2.340270e-53 | -8.615850e-47 |
| Msa0086130 | Msa0194950 | -0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0086130 | Msa0234050 | 0.828981 | 6.645056e-55 | -8.615850e-47 |
| Msa0086130 | Msa0308270 | 0.831481 | 1.629168e-55 | -8.615850e-47 |
| Msa0086130 | Msa0315440 | -0.812710 | 3.697020e-51 | -8.615850e-47 |
| Msa0086130 | Msa0346430 | 0.841515 | 4.535000e-58 | -8.615850e-47 |
| Msa0086130 | Msa0391690 | 0.838112 | 3.489503e-57 | -8.615850e-47 |
| Msa0086130 | Msa0477080 | 0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0086130 | Msa0493630 | 0.808060 | 3.728274e-50 | -8.615850e-47 |
| Msa0086130 | Msa0502100 | 0.811681 | 6.197883e-51 | -8.615850e-47 |
| Msa0086130 | Msa0597330 | 0.807179 | 5.734517e-50 | -8.615850e-47 |
| Msa0086130 | Msa0607210 | 0.802378 | 5.772041e-49 | -8.615850e-47 |
| Msa0086130 | Msa0663920 | 0.809114 | 2.220194e-50 | -8.615850e-47 |
| Msa0086130 | Msa1087850 | 0.831674 | 1.460464e-55 | -8.615850e-47 |
| Msa0086130 | Msa1293510 | 0.810978 | 8.807044e-51 | -8.615850e-47 |
| Msa0086130 | Msa1382160 | 0.813495 | 2.487305e-51 | -8.615850e-47 |
| Msa0086130 | Msa1417150 | 0.821333 | 4.268243e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086130 | MtrunA17_Chr1g0201751 | 97.166 | 247 | 3 | 1 | 1 | 247 | 1 | 243 | 8.18e-174 | 478 |
| Msa0086130 | MtrunA17_Chr4g0051101 | 40.513 | 195 | 58 | 5 | 44 | 223 | 36 | 187 | 3.54e-25 | 98.6 |
| Msa0086130 | MtrunA17_Chr8g0355121 | 31.224 | 237 | 134 | 4 | 28 | 245 | 85 | 311 | 6.21e-18 | 81.3 |
| Msa0086130 | MtrunA17_Chr3g0080341 | 31.628 | 215 | 88 | 5 | 42 | 211 | 96 | 296 | 1.27e-16 | 77.8 |
| Msa0086130 | MtrunA17_Chr3g0133971 | 43.697 | 119 | 58 | 3 | 133 | 247 | 318 | 431 | 8.30e-16 | 76.3 |
| Msa0086130 | MtrunA17_Chr2g0321411 | 32.273 | 220 | 120 | 8 | 23 | 225 | 62 | 269 | 9.23e-16 | 75.1 |
| Msa0086130 | MtrunA17_Chr5g0440841 | 35.829 | 187 | 83 | 6 | 32 | 211 | 87 | 243 | 8.40e-14 | 69.3 |
| Msa0086130 | MtrunA17_Chr4g0044771 | 56.250 | 64 | 24 | 1 | 150 | 213 | 289 | 348 | 3.11e-13 | 68.6 |
| Msa0086130 | MtrunA17_Chr7g0254991 | 47.674 | 86 | 31 | 2 | 161 | 244 | 244 | 317 | 3.48e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086130 | AT5G44080.1 | 46.545 | 275 | 82 | 9 | 9 | 247 | 70 | 315 | 3.75e-66 | 207 |
| Msa0086130 | AT1G03970.1 | 49.153 | 236 | 85 | 8 | 19 | 247 | 63 | 270 | 5.98e-54 | 175 |
| Msa0086130 | AT2G36270.1 | 45.082 | 122 | 57 | 4 | 127 | 245 | 320 | 434 | 2.85e-16 | 77.8 |
| Msa0086130 | AT2G36270.2 | 45.082 | 122 | 57 | 4 | 127 | 245 | 320 | 434 | 2.85e-16 | 77.8 |
| Msa0086130 | AT1G45249.1 | 43.548 | 124 | 58 | 3 | 127 | 247 | 302 | 416 | 3.26e-16 | 77.8 |
| Msa0086130 | AT1G45249.7 | 43.548 | 124 | 58 | 3 | 127 | 247 | 317 | 431 | 4.06e-16 | 77.4 |
| Msa0086130 | AT1G45249.6 | 43.548 | 124 | 58 | 3 | 127 | 247 | 317 | 431 | 4.06e-16 | 77.4 |
| Msa0086130 | AT2G36270.3 | 50.000 | 96 | 45 | 2 | 127 | 222 | 320 | 412 | 2.07e-15 | 75.5 |
| Msa0086130 | AT3G56850.1 | 31.169 | 231 | 104 | 6 | 42 | 244 | 91 | 294 | 3.11e-15 | 73.9 |
| Msa0086130 | AT2G41070.4 | 31.944 | 216 | 102 | 8 | 42 | 244 | 85 | 268 | 2.07e-13 | 68.6 |
| Msa0086130 | AT1G45249.3 | 40.000 | 135 | 58 | 4 | 127 | 247 | 302 | 427 | 2.30e-13 | 69.3 |
| Msa0086130 | AT2G41070.3 | 31.944 | 216 | 102 | 8 | 42 | 244 | 76 | 259 | 2.39e-13 | 68.2 |
| Msa0086130 | AT2G41070.1 | 31.944 | 216 | 102 | 8 | 42 | 244 | 76 | 259 | 2.39e-13 | 68.2 |
| Msa0086130 | AT2G41070.2 | 31.944 | 216 | 102 | 8 | 42 | 244 | 76 | 259 | 2.39e-13 | 68.2 |
| Msa0086130 | AT1G49720.1 | 45.361 | 97 | 48 | 2 | 153 | 247 | 299 | 392 | 2.83e-13 | 68.9 |
| Msa0086130 | AT1G49720.3 | 45.361 | 97 | 48 | 2 | 153 | 247 | 299 | 392 | 2.83e-13 | 68.9 |
| Msa0086130 | AT3G19290.3 | 45.455 | 99 | 45 | 3 | 153 | 247 | 339 | 432 | 6.22e-13 | 68.2 |
| Msa0086130 | AT2G41070.5 | 33.871 | 186 | 86 | 7 | 42 | 213 | 76 | 238 | 1.14e-12 | 66.2 |
| Msa0086130 | AT4G34000.1 | 51.515 | 66 | 32 | 0 | 161 | 226 | 368 | 433 | 1.25e-12 | 67.4 |
| Msa0086130 | AT4G34000.4 | 51.515 | 66 | 32 | 0 | 161 | 226 | 368 | 433 | 1.25e-12 | 67.4 |
| Msa0086130 | AT4G34000.2 | 51.515 | 66 | 32 | 0 | 161 | 226 | 368 | 433 | 1.25e-12 | 67.4 |
| Msa0086130 | AT3G19290.4 | 59.016 | 61 | 25 | 0 | 153 | 213 | 339 | 399 | 1.35e-12 | 67.0 |
| Msa0086130 | AT3G19290.1 | 59.016 | 61 | 25 | 0 | 153 | 213 | 339 | 399 | 1.66e-12 | 67.0 |
| Msa0086130 | AT3G19290.5 | 59.016 | 61 | 25 | 0 | 153 | 213 | 339 | 399 | 1.66e-12 | 67.0 |
| Msa0086130 | AT4G34000.3 | 45.946 | 74 | 33 | 1 | 161 | 227 | 368 | 441 | 1.19e-11 | 64.3 |
| Msa0086130 | AT1G49720.2 | 49.296 | 71 | 36 | 0 | 153 | 223 | 299 | 369 | 3.32e-11 | 62.8 |
| Msa0086130 | AT3G44460.1 | 32.906 | 234 | 119 | 7 | 42 | 247 | 108 | 331 | 5.23e-11 | 62.0 |
Find 145 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTGGGATTGTGATTT+TGG | 0.132697 | 1_2:-66720609 | None:intergenic |
| GATTGTGGGAAATAATAAAA+TGG | 0.217623 | 1_2:+66725264 | Msa0086130:three_prime_UTR |
| ATAGAATAGATCTAAGAATT+AGG | 0.232080 | 1_2:-66720637 | None:intergenic |
| TTAGAGAGATGCTATTATTT+AGG | 0.232941 | 1_2:+66725552 | Msa0086130:three_prime_UTR |
| ACACTTCCTCAAAATATATT+AGG | 0.301732 | 1_2:-66726016 | None:intergenic |
| GAAGATGACGATTCCGTTAT+CGG | 0.332969 | 1_2:+66720940 | Msa0086130:CDS |
| TTATCCAATTGCTCCATAAC+AGG | 0.338573 | 1_2:-66721127 | None:intergenic |
| GATTAGATACAACTTTGTTT+TGG | 0.340810 | 1_2:+66725917 | Msa0086130:three_prime_UTR |
| CAAGGAATTGAAAACGTTGA+TGG | 0.345371 | 1_2:+66721007 | Msa0086130:CDS |
| GATTTGATCGTCGAGGAAAT+TGG | 0.346078 | 1_2:-66720735 | None:intergenic |
| AACGTTGATGGGTCGGTGAT+AGG | 0.356163 | 1_2:+66721019 | Msa0086130:CDS |
| GATGGGTCGGTGATAGGGTT+TGG | 0.356739 | 1_2:+66721025 | Msa0086130:CDS |
| CGGTGATAGGGTTTGGGAAT+GGG | 0.358384 | 1_2:+66721032 | Msa0086130:CDS |
| TAGAATAGATCTAAGAATTA+GGG | 0.364886 | 1_2:-66720636 | None:intergenic |
| GTGGAAATGGTTGAAGGTGG+GGG | 0.368454 | 1_2:+66721085 | Msa0086130:CDS |
| CTCGAACCGTCGACGATGTC+TGG | 0.371504 | 1_2:+66720783 | Msa0086130:CDS |
| ATGGGTCGGTGATAGGGTTT+GGG | 0.380377 | 1_2:+66721026 | Msa0086130:CDS |
| GGCCTTCGCTGCTCCACAAC+AGG | 0.380747 | 1_2:-66725166 | None:intergenic |
| TTAGGCTTATCAAGTGGAAT+TGG | 0.384866 | 1_2:+66721449 | Msa0086130:intron |
| GAAGAGAGGACGGCCTGTTA+TGG | 0.389128 | 1_2:+66721114 | Msa0086130:CDS |
| ATGGCAATGGGAATGTGAAT+GGG | 0.390238 | 1_2:+66721062 | Msa0086130:CDS |
| ATTTCTTATGTACTCCATTC+AGG | 0.390544 | 1_2:-66725371 | None:intergenic |
| GGGGTGGAAATGGTTGAAGG+TGG | 0.394857 | 1_2:+66721082 | Msa0086130:CDS |
| TGTGCAGGCTGAGAGGAAAA+AGG | 0.400339 | 1_2:+66722440 | Msa0086130:intron |
| GGTGGAAATGGTTGAAGGTG+GGG | 0.410518 | 1_2:+66721084 | Msa0086130:CDS |
| GAGAATCTGCTGCTAGGTCT+AGG | 0.414539 | 1_2:+66721188 | Msa0086130:CDS |
| TAGTCTTGTTGAGGATGTTA+AGG | 0.418993 | 1_2:+66725771 | Msa0086130:three_prime_UTR |
| TCGGTGATAGGGTTTGGGAA+TGG | 0.430970 | 1_2:+66721031 | Msa0086130:CDS |
| GAATGTGAATGGGGTGGAAA+TGG | 0.432712 | 1_2:+66721072 | Msa0086130:CDS |
| ATTGTGGGAAATAATAAAAT+GGG | 0.433816 | 1_2:+66725265 | Msa0086130:three_prime_UTR |
| GCGGTGGTGAAGTGAGGTTT+AGG | 0.434316 | 1_2:-66720713 | None:intergenic |
| TGCTGTTGAGGATGAGGAGG+AGG | 0.435159 | 1_2:+66720907 | Msa0086130:CDS |
| GGCGAGTGTAAAGAGGTAGT+TGG | 0.436621 | 1_2:+66720524 | Msa0086130:five_prime_UTR |
| AATGGCAATGGGAATGTGAA+TGG | 0.440487 | 1_2:+66721061 | Msa0086130:CDS |
| CAGTGGTAGATCATATTTGC+TGG | 0.440876 | 1_2:+66725220 | Msa0086130:exon |
| ACGGCCTGTTATGGAGCAAT+TGG | 0.442422 | 1_2:+66721123 | Msa0086130:CDS |
| TAGGGTTTGGGAATGGGAAT+GGG | 0.448106 | 1_2:+66721038 | Msa0086130:CDS |
| ATGGGAATGGGAATGGCAAT+GGG | 0.449145 | 1_2:+66721050 | Msa0086130:CDS |
| GCGAGTGTAAAGAGGTAGTT+GGG | 0.455860 | 1_2:+66720525 | Msa0086130:five_prime_UTR |
| AATGGGAATGGGAATGGCAA+TGG | 0.463203 | 1_2:+66721049 | Msa0086130:CDS |
| CCACTGAGCGTCTCCGATAA+CGG | 0.464675 | 1_2:-66720953 | None:intergenic |
| ATAGGGTTTGGGAATGGGAA+TGG | 0.466638 | 1_2:+66721037 | Msa0086130:CDS |
| GGTTAATGATAAGAGATAGA+AGG | 0.467437 | 1_2:+66725340 | Msa0086130:three_prime_UTR |
| TGGAAATGGTTGAAGGTGGG+GGG | 0.467922 | 1_2:+66721086 | Msa0086130:CDS |
| ACGTTGATGGGTCGGTGATA+GGG | 0.467935 | 1_2:+66721020 | Msa0086130:CDS |
| TCAAGTGGAATTGGAGTCCT+TGG | 0.472571 | 1_2:+66721458 | Msa0086130:CDS |
| TGAGGATGAGGAGGAGGGTG+AGG | 0.474318 | 1_2:+66720913 | Msa0086130:CDS |
| AGATGGAGAAGAAGGTGGAT+CGG | 0.476558 | 1_2:-66720690 | None:intergenic |
| TGTGAAAGCTGGTGCTGTTG+AGG | 0.479685 | 1_2:+66720895 | Msa0086130:CDS |
| GGGTGGAAATGGTTGAAGGT+GGG | 0.482957 | 1_2:+66721083 | Msa0086130:CDS |
| TCTTAGATCTATTCTATCCA+TGG | 0.484430 | 1_2:+66720643 | Msa0086130:exon |
| TAAAAGCAGAATTGTGAAGT+TGG | 0.484596 | 1_2:+66725417 | Msa0086130:three_prime_UTR |
| ATGTGCTAGTAGAGGGCAAA+GGG | 0.484672 | 1_2:+66725497 | Msa0086130:three_prime_UTR |
| GGTTTAGGAGATGGAGAAGA+AGG | 0.490179 | 1_2:-66720698 | None:intergenic |
| AGCACATTTGCAGTCTGCAC+AGG | 0.493719 | 1_2:-66725481 | None:intergenic |
| TGACAAGTTGATGAAGGAAA+AGG | 0.495815 | 1_2:+66721503 | Msa0086130:CDS |
| GTGAAGTGAGGTTTAGGAGA+TGG | 0.499875 | 1_2:-66720707 | None:intergenic |
| TAGGTCTAGGGAACGCAAGC+AGG | 0.503430 | 1_2:+66721201 | Msa0086130:CDS |
| TCGAGGAGTGGCGACGGCGT+CGG | 0.506745 | 1_2:-66720765 | None:intergenic |
| TTTGGGAATGGGAATGGGAA+TGG | 0.507407 | 1_2:+66721043 | Msa0086130:CDS |
| GGAAAATGACAAGTTGATGA+AGG | 0.507651 | 1_2:+66721497 | Msa0086130:CDS |
| TGAAATAGTTTGCATGAGGA+AGG | 0.512588 | 1_2:+66725797 | Msa0086130:three_prime_UTR |
| GCGATGTGATCTCCGGCGAT+AGG | 0.515092 | 1_2:+66720822 | Msa0086130:CDS |
| AATGGGGTGGAAATGGTTGA+AGG | 0.515608 | 1_2:+66721079 | Msa0086130:CDS |
| TTCTTTACACTCCCTATCGC+CGG | 0.515808 | 1_2:-66720834 | None:intergenic |
| ATTTATCTTACTTTGACCAC+TGG | 0.518168 | 1_2:+66725737 | Msa0086130:three_prime_UTR |
| GAGTGGCGACGGCGTCGGCG+AGG | 0.520677 | 1_2:-66720760 | None:intergenic |
| ATCGGAAGAAGGCATGAGCT+TGG | 0.521805 | 1_2:-66720672 | None:intergenic |
| AAGGAATTGAAAACGTTGAT+GGG | 0.523079 | 1_2:+66721008 | Msa0086130:CDS |
| CGATGTGATCTCCGGCGATA+GGG | 0.523997 | 1_2:+66720823 | Msa0086130:CDS |
| TCGGAGACGCTCAGTGGTAG+TGG | 0.524000 | 1_2:+66720959 | Msa0086130:CDS |
| GTCTGCACAGGGGTGAGACC+AGG | 0.526399 | 1_2:-66725469 | None:intergenic |
| GTCGCCGGCGATGTGATCTC+CGG | 0.529993 | 1_2:+66720815 | Msa0086130:CDS |
| AGAAGGAATCAGTACCTGAA+TGG | 0.529994 | 1_2:+66725357 | Msa0086130:three_prime_UTR |
| GAAGAAGGTGGATCGGAAGA+AGG | 0.530586 | 1_2:-66720683 | None:intergenic |
| TTAGGAGATGGAGAAGAAGG+TGG | 0.530669 | 1_2:-66720695 | None:intergenic |
| TAGATACAATGTAGGCATCC+TGG | 0.531044 | 1_2:+66725451 | Msa0086130:three_prime_UTR |
| TGGCAATGGGAATGTGAATG+GGG | 0.531390 | 1_2:+66721063 | Msa0086130:CDS |
| ATCAAAATAGTTAGTCTCAA+GGG | 0.531521 | 1_2:+66725310 | Msa0086130:three_prime_UTR |
| AATCAAAATAGTTAGTCTCA+AGG | 0.538063 | 1_2:+66725309 | Msa0086130:three_prime_UTR |
| CTCCTCTAGCTTCACCGCCA+AGG | 0.538630 | 1_2:-66721475 | None:intergenic |
| GTGCTCTTGTAGTCTTGTTG+AGG | 0.541304 | 1_2:+66725762 | Msa0086130:three_prime_UTR |
| AAATTGGCGGTGGTGAAGTG+AGG | 0.542267 | 1_2:-66720719 | None:intergenic |
| GACAAGTGGCGAGTGTAAAG+AGG | 0.544331 | 1_2:+66720517 | Msa0086130:five_prime_UTR |
| GCCGCCACGGTTACTCCGTA+GGG | 0.544674 | 1_2:+66725186 | Msa0086130:CDS |
| AGCTGGTGCTGTTGAGGATG+AGG | 0.545765 | 1_2:+66720901 | Msa0086130:CDS |
| TATCTTACTTTGACCACTGG+TGG | 0.545885 | 1_2:+66725740 | Msa0086130:three_prime_UTR |
| CGATGAGATGATGACGCTGG+AGG | 0.560524 | 1_2:+66720865 | Msa0086130:CDS |
| CATGAGCTTGGAAGAAGCCA+TGG | 0.560742 | 1_2:-66720660 | None:intergenic |
| TCTGTCGAAATTCTGCTGCT+AGG | 0.562774 | 1_2:-66725885 | None:intergenic |
| AGAATCTGCTGCTAGGTCTA+GGG | 0.563610 | 1_2:+66721189 | Msa0086130:CDS |
| TTCCTGTTGTGGAGCAGCGA+AGG | 0.563922 | 1_2:+66725164 | Msa0086130:CDS |
| TATTAACCATCACTGATATG+TGG | 0.565134 | 1_2:+66725658 | Msa0086130:intron |
| GGCCGCCACGGTTACTCCGT+AGG | 0.566727 | 1_2:+66725185 | Msa0086130:CDS |
| ATCGTCGAGGAAATTGGCGG+TGG | 0.569885 | 1_2:-66720729 | None:intergenic |
| ACTGATATGTGGAGATGCCT+TGG | 0.571180 | 1_2:+66725669 | Msa0086130:three_prime_UTR |
| AGAATAGAGAATCTGCTGCT+AGG | 0.572500 | 1_2:+66721182 | Msa0086130:CDS |
| CTCCAGCGTCATCATCTCAT+CGG | 0.572527 | 1_2:-66720864 | None:intergenic |
| AGTGGCGACGGCGTCGGCGA+GGG | 0.573280 | 1_2:-66720759 | None:intergenic |
| ATCGTCGACGGTTCGAGGAG+TGG | 0.573362 | 1_2:-66720777 | None:intergenic |
| AGATGTGAACTGAAGATTGT+GGG | 0.576025 | 1_2:+66725250 | Msa0086130:three_prime_UTR |
| CAGACATCGTCGACGGTTCG+AGG | 0.576404 | 1_2:-66720782 | None:intergenic |
| GCACATTTGCAGTCTGCACA+GGG | 0.576824 | 1_2:-66725480 | None:intergenic |
| GACTGCAAATGTGCTAGTAG+AGG | 0.577729 | 1_2:+66725489 | Msa0086130:three_prime_UTR |
| GCTGTTGAGGATGAGGAGGA+GGG | 0.580538 | 1_2:+66720908 | Msa0086130:CDS |
| GACGGTTCGAGGAGTGGCGA+CGG | 0.580962 | 1_2:-66720771 | None:intergenic |
| AGCAGAATTTCGACAGACAA+AGG | 0.584150 | 1_2:+66725891 | Msa0086130:three_prime_UTR |
| AATTGAAAACGTTGATGGGT+CGG | 0.585668 | 1_2:+66721012 | Msa0086130:CDS |
| GTCTGGCGAGAGATCGTCGC+CGG | 0.590254 | 1_2:+66720800 | Msa0086130:CDS |
| AAGCTGCTCAGCAGAGACAG+AGG | 0.593315 | 1_2:+66721149 | Msa0086130:CDS |
| GCATCTCCACATATCAGTGA+TGG | 0.599753 | 1_2:-66725664 | None:intergenic |
| GTTGTGAAATAGTTTGCATG+AGG | 0.601381 | 1_2:+66725793 | Msa0086130:three_prime_UTR |
| TTGATCGTCGAGGAAATTGG+CGG | 0.607652 | 1_2:-66720732 | None:intergenic |
| ACTGCAAATGTGCTAGTAGA+GGG | 0.608591 | 1_2:+66725490 | Msa0086130:three_prime_UTR |
| ATCGCCGGAGATCACATCGC+CGG | 0.608850 | 1_2:-66720819 | None:intergenic |
| TTCCGATGAGATGATGACGC+TGG | 0.609887 | 1_2:+66720862 | Msa0086130:CDS |
| CTCTCGCCAGACATCGTCGA+CGG | 0.611545 | 1_2:-66720789 | None:intergenic |
| CAATGGGAATGTGAATGGGG+TGG | 0.612710 | 1_2:+66721066 | Msa0086130:CDS |
| TGGAGCAGCGAAGGCCGCCA+CGG | 0.612735 | 1_2:+66725173 | Msa0086130:CDS |
| ATGTAGTTTAGATACAATGT+AGG | 0.614808 | 1_2:+66725443 | Msa0086130:three_prime_UTR |
| GTAGGGTTCGCTCCTTGCAG+TGG | 0.618144 | 1_2:+66725203 | Msa0086130:CDS |
| AGTGGAATTGGAGTCCTTGG+CGG | 0.619638 | 1_2:+66721461 | Msa0086130:CDS |
| GTCCTTGGCGGTGAAGCTAG+AGG | 0.622234 | 1_2:+66721473 | Msa0086130:CDS |
| TTCTGACAGTGTAGAAGCTG+CGG | 0.626318 | 1_2:-66720557 | None:intergenic |
| TACATTGTATCTAAACTACA+TGG | 0.630821 | 1_2:-66725441 | None:intergenic |
| CCGTTATCGGAGACGCTCAG+TGG | 0.634758 | 1_2:+66720953 | Msa0086130:CDS |
| ATATTCTTGTGCAGGCTGAG+AGG | 0.635094 | 1_2:+66722433 | Msa0086130:intron |
| AATGTGCTAGTAGAGGGCAA+AGG | 0.636434 | 1_2:+66725496 | Msa0086130:three_prime_UTR |
| TCATTTATGTGATCTGTCAG+TGG | 0.654675 | 1_2:+66725596 | Msa0086130:three_prime_UTR |
| AAATATGATCTACCACTGCA+AGG | 0.655779 | 1_2:-66725215 | None:intergenic |
| GTTAGTCTCAAGGGTAACTG+TGG | 0.658223 | 1_2:+66725319 | Msa0086130:three_prime_UTR |
| AAGATGTGAACTGAAGATTG+TGG | 0.663194 | 1_2:+66725249 | Msa0086130:three_prime_UTR |
| GACTACAAGAGCACCACCAG+TGG | 0.664023 | 1_2:-66725753 | None:intergenic |
| TGGTAGATCATATTTGCTGG+TGG | 0.666125 | 1_2:+66725223 | Msa0086130:exon |
| CGAGGGAGATTTGATCGTCG+AGG | 0.673387 | 1_2:-66720742 | None:intergenic |
| ACTGCAAGGAGCGAACCCTA+CGG | 0.673999 | 1_2:-66725201 | None:intergenic |
| ACGACTATATGATGTAGTCA+CGG | 0.675264 | 1_2:+66725528 | Msa0086130:three_prime_UTR |
| TGGTGCTGTTGAGGATGAGG+AGG | 0.680394 | 1_2:+66720904 | Msa0086130:CDS |
| CAAGCACAGAAGTTTCAAGA+CGG | 0.681774 | 1_2:-66725623 | None:intergenic |
| CAGTACAACTAAATTTACCA+AGG | 0.691069 | 1_2:-66725686 | None:intergenic |
| CTTGGCGGTGAAGCTAGAGG+AGG | 0.703301 | 1_2:+66721476 | Msa0086130:CDS |
| CGAACCCTACGGAGTAACCG+TGG | 0.709737 | 1_2:-66725190 | None:intergenic |
| TGTGCTAGTAGAGGGCAAAG+GGG | 0.714313 | 1_2:+66725498 | Msa0086130:three_prime_UTR |
| CACATTTGCAGTCTGCACAG+GGG | 0.730816 | 1_2:-66725479 | None:intergenic |
| ACCCTACGGAGTAACCGTGG+CGG | 0.761547 | 1_2:-66725187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAATACTATAGAAA+AGG | - | chr1_2:66722757-66722776 | None:intergenic | 10.0% |
| !!! | AATAATTTTAAACTCATTTT+GGG | - | chr1_2:66724257-66724276 | None:intergenic | 10.0% |
| !!! | TAATAATTTTAAACTCATTT+TGG | - | chr1_2:66724258-66724277 | None:intergenic | 10.0% |
| !!! | AAAATGAGTTTAAAATTATT+AGG | + | chr1_2:66724257-66724276 | Msa0086130:intron | 10.0% |
| !! | TTAAAATTATTAGGTTATAA+AGG | + | chr1_2:66724266-66724285 | Msa0086130:intron | 10.0% |
| !! | AAATAATATGTATAAATAAC+AGG | - | chr1_2:66724771-66724790 | None:intergenic | 10.0% |
| !! | TGAAAGAAAAAATATTTAAA+GGG | - | chr1_2:66724813-66724832 | None:intergenic | 10.0% |
| !!! | ATTTTGACATTTCATAAATT+AGG | + | chr1_2:66721859-66721878 | Msa0086130:intron | 15.0% |
| !!! | TTTTGACATTTCATAAATTA+GGG | + | chr1_2:66721860-66721879 | Msa0086130:intron | 15.0% |
| !! | TCATGATATCAATAATTTAT+AGG | + | chr1_2:66723008-66723027 | Msa0086130:intron | 15.0% |
| !! | CATGATATCAATAATTTATA+GGG | + | chr1_2:66723009-66723028 | Msa0086130:intron | 15.0% |
| !!! | ATTTTTTTAATGAATTTCCT+TGG | + | chr1_2:66723283-66723302 | Msa0086130:intron | 15.0% |
| !!! | ATAATTTTAAACTCATTTTG+GGG | - | chr1_2:66724256-66724275 | None:intergenic | 15.0% |
| !! | ATGTGAAATATAGAATTAAA+TGG | + | chr1_2:66724529-66724548 | Msa0086130:intron | 15.0% |
| !! | CTGAAAGAAAAAATATTTAA+AGG | - | chr1_2:66724814-66724833 | None:intergenic | 15.0% |
| !!! | TTTTTACCTAATATATTTTG+AGG | + | chr1_2:66726010-66726029 | Msa0086130:three_prime_UTR | 15.0% |
| !! | TAGAATAGATCTAAGAATTA+GGG | - | chr1_2:66720639-66720658 | None:intergenic | 20.0% |
| !! | ATAGAATAGATCTAAGAATT+AGG | - | chr1_2:66720640-66720659 | None:intergenic | 20.0% |
| !!! | GCTGATTTATAAAAAAATTG+CGG | - | chr1_2:66721548-66721567 | None:intergenic | 20.0% |
| !! | ATTATAGTAAATTTCCGAAA+TGG | + | chr1_2:66721615-66721634 | Msa0086130:intron | 20.0% |
| !! | GTTTGAAAAAAAAAAACAGA+AGG | - | chr1_2:66722116-66722135 | None:intergenic | 20.0% |
| !! | CAAATATATAAAAACAAGCA+TGG | - | chr1_2:66722286-66722305 | None:intergenic | 20.0% |
| !!! | CATGCTTGTTTTTATATATT+TGG | + | chr1_2:66722284-66722303 | Msa0086130:intron | 20.0% |
| !!! | TATATATTTGGAATGTTTCT+TGG | + | chr1_2:66722296-66722315 | Msa0086130:intron | 20.0% |
| !! | TCTAAATCTGAAAATTCAAA+GGG | - | chr1_2:66722371-66722390 | None:intergenic | 20.0% |
| !!! | TATTTTATGCTATTGTTTGT+TGG | + | chr1_2:66722488-66722507 | Msa0086130:intron | 20.0% |
| !! | AAAACACTTAAAAATGAACT+GGG | - | chr1_2:66722799-66722818 | None:intergenic | 20.0% |
| !! | AAAAACACTTAAAAATGAAC+TGG | - | chr1_2:66722800-66722819 | None:intergenic | 20.0% |
| !! | TGAAAAGGATCTTATATTAA+GGG | - | chr1_2:66722883-66722902 | None:intergenic | 20.0% |
| !! | TTGAAAAGGATCTTATATTA+AGG | - | chr1_2:66722884-66722903 | None:intergenic | 20.0% |
| !!! | ATGCATATAGAATTTTGAAA+AGG | - | chr1_2:66722898-66722917 | None:intergenic | 20.0% |
| !! | TACATTGTGTTTATAAATCA+CGG | + | chr1_2:66723752-66723771 | Msa0086130:intron | 20.0% |
| !! | ACACAAAACTAAAAAAACAA+CGG | - | chr1_2:66724185-66724204 | None:intergenic | 20.0% |
| !! | TCAAGATTCATAATTAACAA+TGG | - | chr1_2:66724308-66724327 | None:intergenic | 20.0% |
| !! | TAATTCTGTCAAATAGTTAA+AGG | + | chr1_2:66724469-66724488 | Msa0086130:intron | 20.0% |
| !! | TATCTCTTAAATCTTTGAAT+CGG | - | chr1_2:66724969-66724988 | None:intergenic | 20.0% |
| !! | ATTGTGGGAAATAATAAAAT+GGG | + | chr1_2:66725265-66725284 | Msa0086130:three_prime_UTR | 20.0% |
| !!! | GAATTAGGGTTTTTGAAATT+GGG | - | chr1_2:66720625-66720644 | None:intergenic | 25.0% |
| !!! | AGAATTAGGGTTTTTGAAAT+TGG | - | chr1_2:66720626-66720645 | None:intergenic | 25.0% |
| ! | GTTTCTCAAATTATTATGTC+CGG | - | chr1_2:66721269-66721288 | None:intergenic | 25.0% |
| !!! | TGGGTTTTTTACTTTTGTTT+TGG | + | chr1_2:66721414-66721433 | Msa0086130:intron | 25.0% |
| !!! | TTTTGGTTTTGTGTGATTTT+AGG | + | chr1_2:66721431-66721450 | Msa0086130:intron | 25.0% |
| !! | CTCTATTTAAACTTTGTTGT+CGG | + | chr1_2:66721685-66721704 | Msa0086130:intron | 25.0% |
| ! | TTCTAAACTATCATCAATAG+AGG | - | chr1_2:66721779-66721798 | None:intergenic | 25.0% |
| ! | AAACAGAAGGATTTCAATAA+TGG | - | chr1_2:66722103-66722122 | None:intergenic | 25.0% |
| !! | CACAAATAGAATGAGATTTT+AGG | - | chr1_2:66722220-66722239 | None:intergenic | 25.0% |
| ! | CTCTAAATCTGAAAATTCAA+AGG | - | chr1_2:66722372-66722391 | None:intergenic | 25.0% |
| ! | ATATTATCTGTTAGATGTCA+GGG | - | chr1_2:66722417-66722436 | None:intergenic | 25.0% |
| ! | AATATTATCTGTTAGATGTC+AGG | - | chr1_2:66722418-66722437 | None:intergenic | 25.0% |
| !!! | TATTGTTTGTTGGTTTGTTT+TGG | + | chr1_2:66722498-66722517 | Msa0086130:intron | 25.0% |
| ! | AAACACTTAAAAATGAACTG+GGG | - | chr1_2:66722798-66722817 | None:intergenic | 25.0% |
| ! | TATTAAGGGACAATAAAAAG+TGG | - | chr1_2:66722869-66722888 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCACAAATACCA+AGG | - | chr1_2:66723303-66723322 | None:intergenic | 25.0% |
| ! | AAACCAACACTTAAAAGAAA+TGG | + | chr1_2:66723323-66723342 | Msa0086130:intron | 25.0% |
| !!! | TGTTAGAATTTTTTATACCC+TGG | - | chr1_2:66723416-66723435 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr1_2:66723604-66723623 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr1_2:66723530-66723549 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | + | chr1_2:66723604-66723623 | Msa0086130:intron | 25.0% |
| ! | TATAAACACAATGTAATTGC+AGG | - | chr1_2:66723747-66723766 | None:intergenic | 25.0% |
| ! | TTACTATCAATTAGTATGCT+TGG | + | chr1_2:66723912-66723931 | Msa0086130:intron | 25.0% |
| ! | TACTATCAATTAGTATGCTT+GGG | + | chr1_2:66723913-66723932 | Msa0086130:intron | 25.0% |
| ! | TTAGGTTATAAAGGTAGATT+TGG | + | chr1_2:66724275-66724294 | Msa0086130:intron | 25.0% |
| ! | TAGGTTATAAAGGTAGATTT+GGG | + | chr1_2:66724276-66724295 | Msa0086130:intron | 25.0% |
| ! | TTTGACAGAATTATCAATCA+TGG | - | chr1_2:66724462-66724481 | None:intergenic | 25.0% |
| !!! | TTTTGTAGTGTGTTTTAACA+TGG | - | chr1_2:66724666-66724685 | None:intergenic | 25.0% |
| !! | TAATTTTTGACACACTAGTA+TGG | + | chr1_2:66724703-66724722 | Msa0086130:intron | 25.0% |
| ! | TGATATGGAAAATCAAGAAT+AGG | + | chr1_2:66724934-66724953 | Msa0086130:intron | 25.0% |
| ! | GATATGGAAAATCAAGAATA+GGG | + | chr1_2:66724935-66724954 | Msa0086130:intron | 25.0% |
| ! | AGAGATACAAAAGAATAGTT+TGG | + | chr1_2:66724982-66725001 | Msa0086130:intron | 25.0% |
| ! | ATAGATAGCTAACATCTATT+AGG | - | chr1_2:66725088-66725107 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTGTGTAGCTTA+TGG | + | chr1_2:66725132-66725151 | Msa0086130:intron | 25.0% |
| ! | GATTGTGGGAAATAATAAAA+TGG | + | chr1_2:66725264-66725283 | Msa0086130:three_prime_UTR | 25.0% |
| !! | AATCAAAATAGTTAGTCTCA+AGG | + | chr1_2:66725309-66725328 | Msa0086130:three_prime_UTR | 25.0% |
| !! | ATCAAAATAGTTAGTCTCAA+GGG | + | chr1_2:66725310-66725329 | Msa0086130:three_prime_UTR | 25.0% |
| !! | AATGTCTTTTGCTCATTTTA+TGG | + | chr1_2:66725391-66725410 | Msa0086130:three_prime_UTR | 25.0% |
| ! | TACATTGTATCTAAACTACA+TGG | - | chr1_2:66725444-66725463 | None:intergenic | 25.0% |
| ! | ATGTAGTTTAGATACAATGT+AGG | + | chr1_2:66725443-66725462 | Msa0086130:three_prime_UTR | 25.0% |
| ! | TTAGAGAGATGCTATTATTT+AGG | + | chr1_2:66725552-66725571 | Msa0086130:three_prime_UTR | 25.0% |
| !!! | GATTAGATACAACTTTGTTT+TGG | + | chr1_2:66725917-66725936 | Msa0086130:three_prime_UTR | 25.0% |
| ! | ACACTTCCTCAAAATATATT+AGG | - | chr1_2:66726019-66726038 | None:intergenic | 25.0% |
| !!! | TAATATATTTTGAGGAAGTG+TGG | + | chr1_2:66726018-66726037 | Msa0086130:three_prime_UTR | 25.0% |
| ! | TGAAATTGGGATTGTGATTT+TGG | - | chr1_2:66720612-66720631 | None:intergenic | 30.0% |
| TCTTAGATCTATTCTATCCA+TGG | + | chr1_2:66720643-66720662 | Msa0086130:exon | 30.0% | |
| AAGGAATTGAAAACGTTGAT+GGG | + | chr1_2:66721008-66721027 | Msa0086130:CDS | 30.0% | |
| GTCTGATATGTTATGATACA+CGG | + | chr1_2:66721240-66721259 | Msa0086130:intron | 30.0% | |
| !!! | TGCTTTTGTTTTTGTGATGT+GGG | + | chr1_2:66721395-66721414 | Msa0086130:intron | 30.0% |
| ! | ATTTAAACTTTGTTGTCGGT+AGG | + | chr1_2:66721689-66721708 | Msa0086130:intron | 30.0% |
| ! | TAGGATTTAAAGTAGGGTTA+GGG | + | chr1_2:66721708-66721727 | Msa0086130:intron | 30.0% |
| ! | TTTGGCAGTTTTCGATTTAA+GGG | + | chr1_2:66721833-66721852 | Msa0086130:intron | 30.0% |
| !! | AGGATTTCAATAATGGACAT+TGG | - | chr1_2:66722096-66722115 | None:intergenic | 30.0% |
| AAAACTAATTGCACAGTCAA+AGG | - | chr1_2:66722158-66722177 | None:intergenic | 30.0% | |
| !!! | TGTGCAATTAGTTTTTACGT+GGG | + | chr1_2:66722163-66722182 | Msa0086130:intron | 30.0% |
| !!! | TTTTAGGACTGAATTCTATG+AGG | - | chr1_2:66722204-66722223 | None:intergenic | 30.0% |
| AGAACAAAAAAGGAACTTTG+TGG | - | chr1_2:66722249-66722268 | None:intergenic | 30.0% | |
| ATGTGTTAGGAGAACAAAAA+AGG | - | chr1_2:66722259-66722278 | None:intergenic | 30.0% | |
| TATTATCTGTTAGATGTCAG+GGG | - | chr1_2:66722416-66722435 | None:intergenic | 30.0% | |
| AACAGATAATATTCTTGTGC+AGG | + | chr1_2:66722425-66722444 | Msa0086130:intron | 30.0% | |
| CAGTTGTATTGTTTACCAAA+AGG | - | chr1_2:66722525-66722544 | None:intergenic | 30.0% | |
| TACTGATGAATATGTTGTCT+TGG | + | chr1_2:66722616-66722635 | Msa0086130:intron | 30.0% | |
| ! | AGTTTTCGTTCTTAAATGTG+AGG | + | chr1_2:66722669-66722688 | Msa0086130:intron | 30.0% |
| ! | TTTTACTTCCAATATGCCAT+TGG | + | chr1_2:66722708-66722727 | Msa0086130:intron | 30.0% |
| GAGGAATTTATGTTTCTCAA+TGG | - | chr1_2:66722958-66722977 | None:intergenic | 30.0% | |
| GGTATTAAGAAAAGTAGTTG+TGG | - | chr1_2:66723072-66723091 | None:intergenic | 30.0% | |
| !! | TCTCCATTTCTTTTAAGTGT+TGG | - | chr1_2:66723329-66723348 | None:intergenic | 30.0% |
| ATGTATGTGGTCTATATTGT+AGG | - | chr1_2:66723556-66723575 | None:intergenic | 30.0% | |
| !!! | CCTAATTGACAGTTTTTTGT+TGG | - | chr1_2:66723662-66723681 | None:intergenic | 30.0% |
| CCAACAAAAAACTGTCAATT+AGG | + | chr1_2:66723659-66723678 | Msa0086130:intron | 30.0% | |
| !!! | TTTCTTTTTTTAGTAGCCAG+CGG | + | chr1_2:66724145-66724164 | Msa0086130:intron | 30.0% |
| AGGTTATAAAGGTAGATTTG+GGG | + | chr1_2:66724277-66724296 | Msa0086130:intron | 30.0% | |
| GATATCATCACAGAACATTA+TGG | + | chr1_2:66724562-66724581 | Msa0086130:intron | 30.0% | |
| AGTACACATAGTACATTGTA+GGG | - | chr1_2:66724862-66724881 | None:intergenic | 30.0% | |
| TAGTACACATAGTACATTGT+AGG | - | chr1_2:66724863-66724882 | None:intergenic | 30.0% | |
| !! | GCACATGTTTTATTAGTTGA+AGG | + | chr1_2:66724900-66724919 | Msa0086130:intron | 30.0% |
| AAGGTTACTTGCATATGATA+TGG | + | chr1_2:66724919-66724938 | Msa0086130:intron | 30.0% | |
| AACAGCAAACAAACTTCATA+AGG | - | chr1_2:66725042-66725061 | None:intergenic | 30.0% | |
| TGTTAGCTATCTATAGTGAT+TGG | + | chr1_2:66725094-66725113 | Msa0086130:intron | 30.0% | |
| AAGCTACACACAAATAAAAC+AGG | - | chr1_2:66725131-66725150 | None:intergenic | 30.0% | |
| GGTTAATGATAAGAGATAGA+AGG | + | chr1_2:66725340-66725359 | Msa0086130:three_prime_UTR | 30.0% | |
| ATTTCTTATGTACTCCATTC+AGG | - | chr1_2:66725374-66725393 | None:intergenic | 30.0% | |
| TAAAAGCAGAATTGTGAAGT+TGG | + | chr1_2:66725417-66725436 | Msa0086130:three_prime_UTR | 30.0% | |
| TATTAACCATCACTGATATG+TGG | + | chr1_2:66725658-66725677 | Msa0086130:intron | 30.0% | |
| CAGTACAACTAAATTTACCA+AGG | - | chr1_2:66725689-66725708 | None:intergenic | 30.0% | |
| ATAAATTCCTCAAAAAGACG+AGG | - | chr1_2:66725723-66725742 | None:intergenic | 30.0% | |
| ATTTATCTTACTTTGACCAC+TGG | + | chr1_2:66725737-66725756 | Msa0086130:three_prime_UTR | 30.0% | |
| !!! | CAACTTTGTTTTGGTATCTT+AGG | + | chr1_2:66725926-66725945 | Msa0086130:three_prime_UTR | 30.0% |
| CAAGGAATTGAAAACGTTGA+TGG | + | chr1_2:66721007-66721026 | Msa0086130:CDS | 35.0% | |
| ! | AATTGAAAACGTTGATGGGT+CGG | + | chr1_2:66721012-66721031 | Msa0086130:CDS | 35.0% |
| TTATCCAATTGCTCCATAAC+AGG | - | chr1_2:66721130-66721149 | None:intergenic | 35.0% | |
| !!! | GTGCTTTTGTTTTTGTGATG+TGG | + | chr1_2:66721394-66721413 | Msa0086130:intron | 35.0% |
| ! | GTGATTTTAGGCTTATCAAG+TGG | + | chr1_2:66721443-66721462 | Msa0086130:intron | 35.0% |
| TTAGGCTTATCAAGTGGAAT+TGG | + | chr1_2:66721449-66721468 | Msa0086130:intron | 35.0% | |
| !! | GGAAAATGACAAGTTGATGA+AGG | + | chr1_2:66721497-66721516 | Msa0086130:CDS | 35.0% |
| !! | TGACAAGTTGATGAAGGAAA+AGG | + | chr1_2:66721503-66721522 | Msa0086130:CDS | 35.0% |
| ! | CAAAGACGGTTTTACCATTT+CGG | - | chr1_2:66721632-66721651 | None:intergenic | 35.0% |
| ACCATCATCAATTCCAAAGA+CGG | - | chr1_2:66721646-66721665 | None:intergenic | 35.0% | |
| ! | TTGTCGGTAGGATTTAAAGT+AGG | + | chr1_2:66721701-66721720 | Msa0086130:intron | 35.0% |
| ! | TGTCGGTAGGATTTAAAGTA+GGG | + | chr1_2:66721702-66721721 | Msa0086130:intron | 35.0% |
| ! | GTAGGATTTAAAGTAGGGTT+AGG | + | chr1_2:66721707-66721726 | Msa0086130:intron | 35.0% |
| ! | GAGATTGCTGTCGATTAATT+TGG | + | chr1_2:66721750-66721769 | Msa0086130:intron | 35.0% |
| ! | TGATGATTTTTCACGACAGA+GGG | + | chr1_2:66721801-66721820 | Msa0086130:intron | 35.0% |
| ! | GTTTGGCAGTTTTCGATTTA+AGG | + | chr1_2:66721832-66721851 | Msa0086130:intron | 35.0% |
| TACAAGGCAAACATTCTTTG+TGG | + | chr1_2:66721980-66721999 | Msa0086130:intron | 35.0% | |
| AACCATTCGACTCTGATTAA+GGG | + | chr1_2:66722018-66722037 | Msa0086130:intron | 35.0% | |
| !!! | CTGTGCAATTAGTTTTTACG+TGG | + | chr1_2:66722162-66722181 | Msa0086130:intron | 35.0% |
| TACGTGGGTAATTTCCATAA+CGG | + | chr1_2:66722178-66722197 | Msa0086130:intron | 35.0% | |
| ATTATCTGTTAGATGTCAGG+GGG | - | chr1_2:66722415-66722434 | None:intergenic | 35.0% | |
| !!! | TTGGTTTGTTTTGGACCTTT+TGG | + | chr1_2:66722507-66722526 | Msa0086130:intron | 35.0% |
| CTTCAGCTATGGTATCAAAT+GGG | - | chr1_2:66722580-66722599 | None:intergenic | 35.0% | |
| TCTTCAGCTATGGTATCAAA+TGG | - | chr1_2:66722581-66722600 | None:intergenic | 35.0% | |
| AGAAGAAACCAATGGCATAT+TGG | - | chr1_2:66722719-66722738 | None:intergenic | 35.0% | |
| CTTGATGTAGAAGAAACCAA+TGG | - | chr1_2:66722727-66722746 | None:intergenic | 35.0% | |
| GTCTTATAATTAGAGGCAGA+GGG | - | chr1_2:66722840-66722859 | None:intergenic | 35.0% | |
| AGGGACAATAAAAAGTGGAA+GGG | - | chr1_2:66722864-66722883 | None:intergenic | 35.0% | |
| AAGGGACAATAAAAAGTGGA+AGG | - | chr1_2:66722865-66722884 | None:intergenic | 35.0% | |
| ! | TTCTCAATGGTGCTTTAAAC+AGG | - | chr1_2:66722945-66722964 | None:intergenic | 35.0% |
| TTAATACCCTTGAACTTCGT+TGG | + | chr1_2:66723084-66723103 | Msa0086130:intron | 35.0% | |
| ! | GTTGGAGAGTCTTATGATAA+GGG | + | chr1_2:66723102-66723121 | Msa0086130:intron | 35.0% |
| ATGCAGCAACATATGTATAG+AGG | + | chr1_2:66723441-66723460 | Msa0086130:intron | 35.0% | |
| TGCAGCAACATATGTATAGA+GGG | + | chr1_2:66723442-66723461 | Msa0086130:intron | 35.0% | |
| TTGTTGGACTGAAATCATTC+AGG | - | chr1_2:66723646-66723665 | None:intergenic | 35.0% | |
| AATCTAGTGCAAGAGATAAC+CGG | - | chr1_2:66723813-66723832 | None:intergenic | 35.0% | |
| AATTAGTATGCTTGGGAAGA+GGG | + | chr1_2:66723920-66723939 | Msa0086130:intron | 35.0% | |
| ! | CTTTTGTCTTGCTGCATAAA+TGG | - | chr1_2:66723980-66723999 | None:intergenic | 35.0% |
| ATGCAGCAAGACAAAAGTTA+TGG | + | chr1_2:66723983-66724002 | Msa0086130:intron | 35.0% | |
| TGCAGCAAGACAAAAGTTAT+GGG | + | chr1_2:66723984-66724003 | Msa0086130:intron | 35.0% | |
| ! | TTGGTGGACAGAAATCATTA+AGG | + | chr1_2:66724022-66724041 | Msa0086130:intron | 35.0% |
| GTTGTTTAGAGGAAGCAAAT+AGG | - | chr1_2:66724120-66724139 | None:intergenic | 35.0% | |
| AAGAAATCGCAGTTGTTTAG+AGG | - | chr1_2:66724131-66724150 | None:intergenic | 35.0% | |
| !!! | CTCATTTTGGGGTTTAAGAT+TGG | - | chr1_2:66724245-66724264 | None:intergenic | 35.0% |
| ATTAGCAAATTGCTCACGTA+GGG | - | chr1_2:66724407-66724426 | None:intergenic | 35.0% | |
| !! | AGCAATTTGCTAATGTGCTA+TGG | + | chr1_2:66724413-66724432 | Msa0086130:intron | 35.0% |
| !! | GCAATTTGCTAATGTGCTAT+GGG | + | chr1_2:66724414-66724433 | Msa0086130:intron | 35.0% |
| GAGAGACTACAGAAAACTAT+AGG | + | chr1_2:66724496-66724515 | Msa0086130:intron | 35.0% | |
| ATAGCTAACATCTATTAGGC+TGG | - | chr1_2:66725084-66725103 | None:intergenic | 35.0% | |
| AAATATGATCTACCACTGCA+AGG | - | chr1_2:66725218-66725237 | None:intergenic | 35.0% | |
| AAGATGTGAACTGAAGATTG+TGG | + | chr1_2:66725249-66725268 | Msa0086130:three_prime_UTR | 35.0% | |
| AGATGTGAACTGAAGATTGT+GGG | + | chr1_2:66725250-66725269 | Msa0086130:three_prime_UTR | 35.0% | |
| ACGACTATATGATGTAGTCA+CGG | + | chr1_2:66725528-66725547 | Msa0086130:three_prime_UTR | 35.0% | |
| TCATTTATGTGATCTGTCAG+TGG | + | chr1_2:66725596-66725615 | Msa0086130:three_prime_UTR | 35.0% | |
| ! | TAATAGTCCTCGTCTTTTTG+AGG | + | chr1_2:66725713-66725732 | Msa0086130:three_prime_UTR | 35.0% |
| !! | TAGTCTTGTTGAGGATGTTA+AGG | + | chr1_2:66725771-66725790 | Msa0086130:three_prime_UTR | 35.0% |
| ! | GTTGTGAAATAGTTTGCATG+AGG | + | chr1_2:66725793-66725812 | Msa0086130:three_prime_UTR | 35.0% |
| ! | TGAAATAGTTTGCATGAGGA+AGG | + | chr1_2:66725797-66725816 | Msa0086130:three_prime_UTR | 35.0% |
| GATTTGATCGTCGAGGAAAT+TGG | - | chr1_2:66720738-66720757 | None:intergenic | 40.0% | |
| ! | GAGGATTTTCTTGTGAAAGC+TGG | + | chr1_2:66720884-66720903 | Msa0086130:CDS | 40.0% |
| GAAGATGACGATTCCGTTAT+CGG | + | chr1_2:66720940-66720959 | Msa0086130:CDS | 40.0% | |
| !!! | TGGTAGTGGTATGTTTTCGT+TGG | + | chr1_2:66720973-66720992 | Msa0086130:CDS | 40.0% |
| !! | TCGTTGGATTCGAGTTTTCA+AGG | + | chr1_2:66720989-66721008 | Msa0086130:CDS | 40.0% |
| AATGGCAATGGGAATGTGAA+TGG | + | chr1_2:66721061-66721080 | Msa0086130:CDS | 40.0% | |
| ATGGCAATGGGAATGTGAAT+GGG | + | chr1_2:66721062-66721081 | Msa0086130:CDS | 40.0% | |
| AGAATAGAGAATCTGCTGCT+AGG | + | chr1_2:66721182-66721201 | Msa0086130:CDS | 40.0% | |
| ATGTTATGATACACGGACAC+CGG | + | chr1_2:66721247-66721266 | Msa0086130:intron | 40.0% | |
| CAAATGTGTCAGTGTTGTGT+TGG | + | chr1_2:66721308-66721327 | Msa0086130:intron | 40.0% | |
| GTTGGACTAAAAACACGTGT+CGG | + | chr1_2:66721326-66721345 | Msa0086130:intron | 40.0% | |
| TAAAAACACGTGTCGGATAC+AGG | + | chr1_2:66721333-66721352 | Msa0086130:intron | 40.0% | |
| CGAAATGGTAAAACCGTCTT+TGG | + | chr1_2:66721630-66721649 | Msa0086130:intron | 40.0% | |
| !! | ACCGTCTTTGGAATTGATGA+TGG | + | chr1_2:66721642-66721661 | Msa0086130:intron | 40.0% |
| !! | TTGGAATTGATGATGGTCTG+TGG | + | chr1_2:66721649-66721668 | Msa0086130:intron | 40.0% |
| ! | GTGATGATTTTTCACGACAG+AGG | + | chr1_2:66721800-66721819 | Msa0086130:intron | 40.0% |
| TTGCTGTGGTTAATGCTACA+AGG | + | chr1_2:66721964-66721983 | Msa0086130:intron | 40.0% | |
| GAACCATTCGACTCTGATTA+AGG | + | chr1_2:66722017-66722036 | Msa0086130:intron | 40.0% | |
| ! | GTTGTGCTTGTTAACAGAAG+TGG | + | chr1_2:66722066-66722085 | Msa0086130:intron | 40.0% |
| TGAATTCTATGAGGCCGTTA+TGG | - | chr1_2:66722195-66722214 | None:intergenic | 40.0% | |
| !! | AATGTTTCTTGGAGCACTGT+TGG | + | chr1_2:66722307-66722326 | Msa0086130:intron | 40.0% |
| CTGAAAATTCAAAGGGTTGC+AGG | - | chr1_2:66722364-66722383 | None:intergenic | 40.0% | |
| GCTATGGTATCAAATGGGAA+AGG | - | chr1_2:66722575-66722594 | None:intergenic | 40.0% | |
| TAGCAAGCAATCTTCAGCTA+TGG | - | chr1_2:66722591-66722610 | None:intergenic | 40.0% | |
| ! | GGTCTTATAATTAGAGGCAG+AGG | - | chr1_2:66722841-66722860 | None:intergenic | 40.0% |
| ! | GAAGGGGGTCTTATAATTAG+AGG | - | chr1_2:66722847-66722866 | None:intergenic | 40.0% |
| GGACAATAAAAAGTGGAAGG+GGG | - | chr1_2:66722862-66722881 | None:intergenic | 40.0% | |
| GGGACAATAAAAAGTGGAAG+GGG | - | chr1_2:66722863-66722882 | None:intergenic | 40.0% | |
| ! | CGTTGGAGAGTCTTATGATA+AGG | + | chr1_2:66723101-66723120 | Msa0086130:intron | 40.0% |
| ! | GAGAGTCTTATGATAAGGGA+CGG | + | chr1_2:66723106-66723125 | Msa0086130:intron | 40.0% |
| AATCACTAGTTGACGTGTAG+TGG | + | chr1_2:66723384-66723403 | Msa0086130:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr1_2:66723608-66723627 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr1_2:66723607-66723626 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr1_2:66723607-66723626 | Msa0086130:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr1_2:66723608-66723627 | Msa0086130:intron | 40.0% | |
| AAACTGTCAATTAGGTGCAC+TGG | + | chr1_2:66723667-66723686 | Msa0086130:intron | 40.0% | |
| AATCACGGAAAAACCCACTT+TGG | + | chr1_2:66723767-66723786 | Msa0086130:intron | 40.0% | |
| GAGATAACCGGTTATCATCT+CGG | - | chr1_2:66723801-66723820 | None:intergenic | 40.0% | |
| ACTTGTGCAATAGAGACATC+TGG | - | chr1_2:66723851-66723870 | None:intergenic | 40.0% | |
| CTTCACTAGTAGGCAATGAA+AGG | - | chr1_2:66723886-66723905 | None:intergenic | 40.0% | |
| TTCATTGCCTACTAGTGAAG+AGG | + | chr1_2:66723886-66723905 | Msa0086130:intron | 40.0% | |
| TCATTGCCTACTAGTGAAGA+GGG | + | chr1_2:66723887-66723906 | Msa0086130:intron | 40.0% | |
| GTAATACCCTCTTCACTAGT+AGG | - | chr1_2:66723896-66723915 | None:intergenic | 40.0% | |
| CAATTAGTATGCTTGGGAAG+AGG | + | chr1_2:66723919-66723938 | Msa0086130:intron | 40.0% | |
| CAAACCACCAAAGTTCATTC+AGG | + | chr1_2:66723951-66723970 | Msa0086130:intron | 40.0% | |
| ATGGATGCCTGAATGAACTT+TGG | - | chr1_2:66723961-66723980 | None:intergenic | 40.0% | |
| TGACACTATAGCGTCACTAT+TGG | + | chr1_2:66724204-66724223 | Msa0086130:intron | 40.0% | |
| GACACTATAGCGTCACTATT+GGG | + | chr1_2:66724205-66724224 | Msa0086130:intron | 40.0% | |
| CATTAGCAAATTGCTCACGT+AGG | - | chr1_2:66724408-66724427 | None:intergenic | 40.0% | |
| !!! | GTGGTATTGGCTCTTTTACA+TGG | - | chr1_2:66724599-66724618 | None:intergenic | 40.0% |
| ! | CAAAATCTTTTCCCACTAGG+TGG | - | chr1_2:66724618-66724637 | None:intergenic | 40.0% |
| ! | CACCTAGTGGGAAAAGATTT+TGG | + | chr1_2:66724616-66724635 | Msa0086130:intron | 40.0% |
| ! | CACCAAAATCTTTTCCCACT+AGG | - | chr1_2:66724621-66724640 | None:intergenic | 40.0% |
| ! | CTAGTGGGAAAAGATTTTGG+TGG | + | chr1_2:66724619-66724638 | Msa0086130:intron | 40.0% |
| GGAAAAAGTGATTCCTGTTG+TGG | + | chr1_2:66725153-66725172 | Msa0086130:CDS | 40.0% | |
| CAGTGGTAGATCATATTTGC+TGG | + | chr1_2:66725220-66725239 | Msa0086130:exon | 40.0% | |
| ! | TGGTAGATCATATTTGCTGG+TGG | + | chr1_2:66725223-66725242 | Msa0086130:exon | 40.0% |
| AGAAGGAATCAGTACCTGAA+TGG | + | chr1_2:66725357-66725376 | Msa0086130:three_prime_UTR | 40.0% | |
| TAGATACAATGTAGGCATCC+TGG | + | chr1_2:66725451-66725470 | Msa0086130:three_prime_UTR | 40.0% | |
| CAAGCACAGAAGTTTCAAGA+CGG | - | chr1_2:66725626-66725645 | None:intergenic | 40.0% | |
| TATCTTACTTTGACCACTGG+TGG | + | chr1_2:66725740-66725759 | Msa0086130:three_prime_UTR | 40.0% | |
| AGCAGAATTTCGACAGACAA+AGG | + | chr1_2:66725891-66725910 | Msa0086130:three_prime_UTR | 40.0% | |
| GCGAGTGTAAAGAGGTAGTT+GGG | + | chr1_2:66720525-66720544 | Msa0086130:five_prime_UTR | 45.0% | |
| TTCTGACAGTGTAGAAGCTG+CGG | - | chr1_2:66720560-66720579 | None:intergenic | 45.0% | |
| AGATGGAGAAGAAGGTGGAT+CGG | - | chr1_2:66720693-66720712 | None:intergenic | 45.0% | |
| TTAGGAGATGGAGAAGAAGG+TGG | - | chr1_2:66720698-66720717 | None:intergenic | 45.0% | |
| GGTTTAGGAGATGGAGAAGA+AGG | - | chr1_2:66720701-66720720 | None:intergenic | 45.0% | |
| GTGAAGTGAGGTTTAGGAGA+TGG | - | chr1_2:66720710-66720729 | None:intergenic | 45.0% | |
| TTGATCGTCGAGGAAATTGG+CGG | - | chr1_2:66720735-66720754 | None:intergenic | 45.0% | |
| TTCTTTACACTCCCTATCGC+CGG | - | chr1_2:66720837-66720856 | None:intergenic | 45.0% | |
| ATAGGGTTTGGGAATGGGAA+TGG | + | chr1_2:66721037-66721056 | Msa0086130:CDS | 45.0% | |
| TAGGGTTTGGGAATGGGAAT+GGG | + | chr1_2:66721038-66721057 | Msa0086130:CDS | 45.0% | |
| TTTGGGAATGGGAATGGGAA+TGG | + | chr1_2:66721043-66721062 | Msa0086130:CDS | 45.0% | |
| AATGGGAATGGGAATGGCAA+TGG | + | chr1_2:66721049-66721068 | Msa0086130:CDS | 45.0% | |
| ATGGGAATGGGAATGGCAAT+GGG | + | chr1_2:66721050-66721069 | Msa0086130:CDS | 45.0% | |
| TGGCAATGGGAATGTGAATG+GGG | + | chr1_2:66721063-66721082 | Msa0086130:CDS | 45.0% | |
| GAATGTGAATGGGGTGGAAA+TGG | + | chr1_2:66721072-66721091 | Msa0086130:CDS | 45.0% | |
| AATGGGGTGGAAATGGTTGA+AGG | + | chr1_2:66721079-66721098 | Msa0086130:CDS | 45.0% | |
| AGAATCTGCTGCTAGGTCTA+GGG | + | chr1_2:66721189-66721208 | Msa0086130:CDS | 45.0% | |
| TCAAGTGGAATTGGAGTCCT+TGG | + | chr1_2:66721458-66721477 | Msa0086130:CDS | 45.0% | |
| GACAGAGGGACAAAGTTGTT+TGG | + | chr1_2:66721815-66721834 | Msa0086130:intron | 45.0% | |
| CAAGCAGCTGATGGAAAATG+TGG | - | chr1_2:66721940-66721959 | None:intergenic | 45.0% | |
| AGCAAAAAGCAAGCAGCTGA+TGG | - | chr1_2:66721949-66721968 | None:intergenic | 45.0% | |
| GTCCCTTAATCAGAGTCGAA+TGG | - | chr1_2:66722023-66722042 | None:intergenic | 45.0% | |
| CAAGCATGGTAGCATGTGTT+AGG | - | chr1_2:66722272-66722291 | None:intergenic | 45.0% | |
| ATATTCTTGTGCAGGCTGAG+AGG | + | chr1_2:66722433-66722452 | Msa0086130:intron | 45.0% | |
| GAAAAAGGAGAGGTTCAAGC+AGG | + | chr1_2:66722455-66722474 | Msa0086130:CDS | 45.0% | |
| GACTCTCCAACGAAGTTCAA+GGG | - | chr1_2:66723093-66723112 | None:intergenic | 45.0% | |
| AGACTCTCCAACGAAGTTCA+AGG | - | chr1_2:66723094-66723113 | None:intergenic | 45.0% | |
| ATTCCAAGATGTACTCCCTC+CGG | + | chr1_2:66723473-66723492 | Msa0086130:intron | 45.0% | |
| AGGATATGAGTTACTCCCTC+CGG | - | chr1_2:66723626-66723645 | None:intergenic | 45.0% | |
| ATAACCGGTTATCATCTCGG+TGG | - | chr1_2:66723798-66723817 | None:intergenic | 45.0% | |
| GATGCCTGAATGAACTTTGG+TGG | - | chr1_2:66723958-66723977 | None:intergenic | 45.0% | |
| !!! | TGGGCTGCTCGTTAGTTTTT+TGG | + | chr1_2:66724003-66724022 | Msa0086130:intron | 45.0% |
| !!! | GCTGCTCGTTAGTTTTTTGG+TGG | + | chr1_2:66724006-66724025 | Msa0086130:intron | 45.0% |
| !!! | CTTTTTTTAGTAGCCAGCGG+TGG | + | chr1_2:66724148-66724167 | Msa0086130:intron | 45.0% |
| ! | TCACTATTGGGTTGCAAGAG+TGG | + | chr1_2:66724217-66724236 | Msa0086130:intron | 45.0% |
| TTGCTAATGTGCTATGGGAC+TGG | + | chr1_2:66724419-66724438 | Msa0086130:intron | 45.0% | |
| AAAGAGCCAATACCACCTAG+TGG | + | chr1_2:66724603-66724622 | Msa0086130:intron | 45.0% | |
| AAGAGCCAATACCACCTAGT+GGG | + | chr1_2:66724604-66724623 | Msa0086130:intron | 45.0% | |
| ! | CTTTTCCCACTAGGTGGTAT+TGG | - | chr1_2:66724612-66724631 | None:intergenic | 45.0% |
| ! | GTTAGTCTCAAGGGTAACTG+TGG | + | chr1_2:66725319-66725338 | Msa0086130:three_prime_UTR | 45.0% |
| GCATCTCCACATATCAGTGA+TGG | - | chr1_2:66725667-66725686 | None:intergenic | 45.0% | |
| ACTGATATGTGGAGATGCCT+TGG | + | chr1_2:66725669-66725688 | Msa0086130:three_prime_UTR | 45.0% | |
| !! | GTGCTCTTGTAGTCTTGTTG+AGG | + | chr1_2:66725762-66725781 | Msa0086130:three_prime_UTR | 45.0% |
| TCTGTCGAAATTCTGCTGCT+AGG | - | chr1_2:66725888-66725907 | None:intergenic | 45.0% | |
| GACAAGTGGCGAGTGTAAAG+AGG | + | chr1_2:66720517-66720536 | Msa0086130:five_prime_UTR | 50.0% | |
| GGCGAGTGTAAAGAGGTAGT+TGG | + | chr1_2:66720524-66720543 | Msa0086130:five_prime_UTR | 50.0% | |
| CATGAGCTTGGAAGAAGCCA+TGG | - | chr1_2:66720663-66720682 | None:intergenic | 50.0% | |
| ! | ATCGGAAGAAGGCATGAGCT+TGG | - | chr1_2:66720675-66720694 | None:intergenic | 50.0% |
| GAAGAAGGTGGATCGGAAGA+AGG | - | chr1_2:66720686-66720705 | None:intergenic | 50.0% | |
| AAATTGGCGGTGGTGAAGTG+AGG | - | chr1_2:66720722-66720741 | None:intergenic | 50.0% | |
| ! | TTCCGATGAGATGATGACGC+TGG | + | chr1_2:66720862-66720881 | Msa0086130:CDS | 50.0% |
| CTCCAGCGTCATCATCTCAT+CGG | - | chr1_2:66720867-66720886 | None:intergenic | 50.0% | |
| !! | TGTGAAAGCTGGTGCTGTTG+AGG | + | chr1_2:66720895-66720914 | Msa0086130:CDS | 50.0% |
| ! | AACGTTGATGGGTCGGTGAT+AGG | + | chr1_2:66721019-66721038 | Msa0086130:CDS | 50.0% |
| ! | ACGTTGATGGGTCGGTGATA+GGG | + | chr1_2:66721020-66721039 | Msa0086130:CDS | 50.0% |
| ATGGGTCGGTGATAGGGTTT+GGG | + | chr1_2:66721026-66721045 | Msa0086130:CDS | 50.0% | |
| TCGGTGATAGGGTTTGGGAA+TGG | + | chr1_2:66721031-66721050 | Msa0086130:CDS | 50.0% | |
| CGGTGATAGGGTTTGGGAAT+GGG | + | chr1_2:66721032-66721051 | Msa0086130:CDS | 50.0% | |
| CAATGGGAATGTGAATGGGG+TGG | + | chr1_2:66721066-66721085 | Msa0086130:CDS | 50.0% | |
| GGGTGGAAATGGTTGAAGGT+GGG | + | chr1_2:66721083-66721102 | Msa0086130:CDS | 50.0% | |
| GGTGGAAATGGTTGAAGGTG+GGG | + | chr1_2:66721084-66721103 | Msa0086130:CDS | 50.0% | |
| GTGGAAATGGTTGAAGGTGG+GGG | + | chr1_2:66721085-66721104 | Msa0086130:CDS | 50.0% | |
| TGGAAATGGTTGAAGGTGGG+GGG | + | chr1_2:66721086-66721105 | Msa0086130:CDS | 50.0% | |
| ACGGCCTGTTATGGAGCAAT+TGG | + | chr1_2:66721123-66721142 | Msa0086130:CDS | 50.0% | |
| GAGAATCTGCTGCTAGGTCT+AGG | + | chr1_2:66721188-66721207 | Msa0086130:CDS | 50.0% | |
| AGTGGAATTGGAGTCCTTGG+CGG | + | chr1_2:66721461-66721480 | Msa0086130:CDS | 50.0% | |
| !!! | CAGCTGCTTGCTTTTTGCTG+TGG | + | chr1_2:66721950-66721969 | Msa0086130:intron | 50.0% |
| TGTGCAGGCTGAGAGGAAAA+AGG | + | chr1_2:66722440-66722459 | Msa0086130:intron | 50.0% | |
| AGGCTGAGAGGAAAAAGGAG+AGG | + | chr1_2:66722445-66722464 | Msa0086130:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr1_2:66722975-66722994 | None:intergenic | 50.0% | |
| ! | GTCAATTAGGTGCACTGGTC+AGG | + | chr1_2:66723672-66723691 | Msa0086130:intron | 50.0% |
| TGCAGACCGCATCACATGAT+GGG | + | chr1_2:66723704-66723723 | Msa0086130:intron | 50.0% | |
| ! | ATCACATGATGGGGTCCACA+GGG | + | chr1_2:66723714-66723733 | Msa0086130:intron | 50.0% |
| CACACCACCGAGATGATAAC+CGG | + | chr1_2:66723791-66723810 | Msa0086130:intron | 50.0% | |
| CTAATGTGCTATGGGACTGG+TGG | + | chr1_2:66724422-66724441 | Msa0086130:intron | 50.0% | |
| CACATTTGCAGTCTGCACAG+GGG | - | chr1_2:66725482-66725501 | None:intergenic | 50.0% | |
| GCACATTTGCAGTCTGCACA+GGG | - | chr1_2:66725483-66725502 | None:intergenic | 50.0% | |
| AGCACATTTGCAGTCTGCAC+AGG | - | chr1_2:66725484-66725503 | None:intergenic | 50.0% | |
| GCGGTGGTGAAGTGAGGTTT+AGG | - | chr1_2:66720716-66720735 | None:intergenic | 55.0% | |
| ATCGTCGAGGAAATTGGCGG+TGG | - | chr1_2:66720732-66720751 | None:intergenic | 55.0% | |
| CGAGGGAGATTTGATCGTCG+AGG | - | chr1_2:66720745-66720764 | None:intergenic | 55.0% | |
| CGATGTGATCTCCGGCGATA+GGG | + | chr1_2:66720823-66720842 | Msa0086130:CDS | 55.0% | |
| ! | CGATGAGATGATGACGCTGG+AGG | + | chr1_2:66720865-66720884 | Msa0086130:CDS | 55.0% |
| !! | AGCTGGTGCTGTTGAGGATG+AGG | + | chr1_2:66720901-66720920 | Msa0086130:CDS | 55.0% |
| !! | TGGTGCTGTTGAGGATGAGG+AGG | + | chr1_2:66720904-66720923 | Msa0086130:CDS | 55.0% |
| TGCTGTTGAGGATGAGGAGG+AGG | + | chr1_2:66720907-66720926 | Msa0086130:CDS | 55.0% | |
| GCTGTTGAGGATGAGGAGGA+GGG | + | chr1_2:66720908-66720927 | Msa0086130:CDS | 55.0% | |
| CCACTGAGCGTCTCCGATAA+CGG | - | chr1_2:66720956-66720975 | None:intergenic | 55.0% | |
| GATGGGTCGGTGATAGGGTT+TGG | + | chr1_2:66721025-66721044 | Msa0086130:CDS | 55.0% | |
| GGGGTGGAAATGGTTGAAGG+TGG | + | chr1_2:66721082-66721101 | Msa0086130:CDS | 55.0% | |
| AAATGGTTGAAGGTGGGGGG+AGG | + | chr1_2:66721089-66721108 | Msa0086130:CDS | 55.0% | |
| AATGGTTGAAGGTGGGGGGA+GGG | + | chr1_2:66721090-66721109 | Msa0086130:CDS | 55.0% | |
| GAAGAGAGGACGGCCTGTTA+TGG | + | chr1_2:66721114-66721133 | Msa0086130:CDS | 55.0% | |
| AAGCTGCTCAGCAGAGACAG+AGG | + | chr1_2:66721149-66721168 | Msa0086130:CDS | 55.0% | |
| TAGGTCTAGGGAACGCAAGC+AGG | + | chr1_2:66721201-66721220 | Msa0086130:CDS | 55.0% | |
| ACGTGTAGTGGCAGCAACCA+GGG | + | chr1_2:66723396-66723415 | Msa0086130:intron | 55.0% | |
| ! | TGACCGGAGGGAGTACATCT+TGG | - | chr1_2:66723479-66723498 | None:intergenic | 55.0% |
| CTGCAGACCGCATCACATGA+TGG | + | chr1_2:66723703-66723722 | Msa0086130:intron | 55.0% | |
| GCAGACCGCATCACATGATG+GGG | + | chr1_2:66723705-66723724 | Msa0086130:intron | 55.0% | |
| GTGGACCCCATCATGTGATG+CGG | - | chr1_2:66723713-66723732 | None:intergenic | 55.0% | |
| ! | CATCACATGATGGGGTCCAC+AGG | + | chr1_2:66723713-66723732 | Msa0086130:intron | 55.0% |
| ! | TCACATGATGGGGTCCACAG+GGG | + | chr1_2:66723715-66723734 | Msa0086130:intron | 55.0% |
| CGGTTATCATCTCGGTGGTG+TGG | - | chr1_2:66723793-66723812 | None:intergenic | 55.0% | |
| TTCCTGTTGTGGAGCAGCGA+AGG | + | chr1_2:66725164-66725183 | Msa0086130:CDS | 55.0% | |
| ACTGCAAGGAGCGAACCCTA+CGG | - | chr1_2:66725204-66725223 | None:intergenic | 55.0% | |
| !! | GACTACAAGAGCACCACCAG+TGG | - | chr1_2:66725756-66725775 | None:intergenic | 55.0% |
| ATCGTCGACGGTTCGAGGAG+TGG | - | chr1_2:66720780-66720799 | None:intergenic | 60.0% | |
| CAGACATCGTCGACGGTTCG+AGG | - | chr1_2:66720785-66720804 | None:intergenic | 60.0% | |
| CTCGAACCGTCGACGATGTC+TGG | + | chr1_2:66720783-66720802 | Msa0086130:CDS | 60.0% | |
| CTCTCGCCAGACATCGTCGA+CGG | - | chr1_2:66720792-66720811 | None:intergenic | 60.0% | |
| ATCGCCGGAGATCACATCGC+CGG | - | chr1_2:66720822-66720841 | None:intergenic | 60.0% | |
| GCGATGTGATCTCCGGCGAT+AGG | + | chr1_2:66720822-66720841 | Msa0086130:CDS | 60.0% | |
| TGAGGATGAGGAGGAGGGTG+AGG | + | chr1_2:66720913-66720932 | Msa0086130:CDS | 60.0% | |
| CCGTTATCGGAGACGCTCAG+TGG | + | chr1_2:66720953-66720972 | Msa0086130:CDS | 60.0% | |
| TCGGAGACGCTCAGTGGTAG+TGG | + | chr1_2:66720959-66720978 | Msa0086130:CDS | 60.0% | |
| ATGGTTGAAGGTGGGGGGAG+GGG | + | chr1_2:66721091-66721110 | Msa0086130:CDS | 60.0% | |
| GTCCTTGGCGGTGAAGCTAG+AGG | + | chr1_2:66721473-66721492 | Msa0086130:CDS | 60.0% | |
| ! | CTCCTCTAGCTTCACCGCCA+AGG | - | chr1_2:66721478-66721497 | None:intergenic | 60.0% |
| CTTGGCGGTGAAGCTAGAGG+AGG | + | chr1_2:66721476-66721495 | Msa0086130:CDS | 60.0% | |
| GACGTGTAGTGGCAGCAACC+AGG | + | chr1_2:66723395-66723414 | Msa0086130:intron | 60.0% | |
| ATTGCAGGCAGATGCCCCTG+TGG | - | chr1_2:66723732-66723751 | None:intergenic | 60.0% | |
| CTCGGTGGTGTGGCCAAAGT+GGG | - | chr1_2:66723783-66723802 | None:intergenic | 60.0% | |
| TCTCGGTGGTGTGGCCAAAG+TGG | - | chr1_2:66723784-66723803 | None:intergenic | 60.0% | |
| ACCCTACGGAGTAACCGTGG+CGG | - | chr1_2:66725190-66725209 | None:intergenic | 60.0% | |
| CGAACCCTACGGAGTAACCG+TGG | - | chr1_2:66725193-66725212 | None:intergenic | 60.0% | |
| GTAGGGTTCGCTCCTTGCAG+TGG | + | chr1_2:66725203-66725222 | Msa0086130:CDS | 60.0% | |
| GACGGTTCGAGGAGTGGCGA+CGG | - | chr1_2:66720774-66720793 | None:intergenic | 65.0% | |
| GTCTGGCGAGAGATCGTCGC+CGG | + | chr1_2:66720800-66720819 | Msa0086130:CDS | 65.0% | |
| GTCGCCGGCGATGTGATCTC+CGG | + | chr1_2:66720815-66720834 | Msa0086130:CDS | 65.0% | |
| TGGTTGAAGGTGGGGGGAGG+GGG | + | chr1_2:66721092-66721111 | Msa0086130:CDS | 65.0% | |
| AGTAGCCAGCGGTGGCGCAA+CGG | + | chr1_2:66724156-66724175 | Msa0086130:intron | 65.0% | |
| GGCCTTCGCTGCTCCACAAC+AGG | - | chr1_2:66725169-66725188 | None:intergenic | 65.0% | |
| GCCGCCACGGTTACTCCGTA+GGG | + | chr1_2:66725186-66725205 | Msa0086130:CDS | 65.0% | |
| GTCTGCACAGGGGTGAGACC+AGG | - | chr1_2:66725472-66725491 | None:intergenic | 65.0% | |
| TCGAGGAGTGGCGACGGCGT+CGG | - | chr1_2:66720768-66720787 | None:intergenic | 70.0% | |
| GGGGGAGGGGGAAGAGAGGA+CGG | + | chr1_2:66721104-66721123 | Msa0086130:CDS | 70.0% | |
| TGGAGCAGCGAAGGCCGCCA+CGG | + | chr1_2:66725173-66725192 | Msa0086130:CDS | 70.0% | |
| GGCCGCCACGGTTACTCCGT+AGG | + | chr1_2:66725185-66725204 | Msa0086130:CDS | 70.0% | |
| !! | AGTGGCGACGGCGTCGGCGA+GGG | - | chr1_2:66720762-66720781 | None:intergenic | 75.0% |
| GGTGGGGGGAGGGGGAAGAG+AGG | + | chr1_2:66721100-66721119 | Msa0086130:CDS | 75.0% | |
| !!! | GAGTGGCGACGGCGTCGGCG+AGG | - | chr1_2:66720763-66720782 | None:intergenic | 80.0% |
| ! | GGCAGCCGTTGCGCCACCGC+TGG | - | chr1_2:66724164-66724183 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66720508 | 66726045 | 66720508 | ID=Msa0086130;Name=Msa0086130 |
| chr1_2 | mRNA | 66720508 | 66726045 | 66720508 | ID=Msa0086130-mRNA-1;Parent=Msa0086130;Name=Msa0086130-mRNA-1;_AED=0.06;_eAED=0.06;_QI=154|1|1|1|0.75|0.6|5|795|247 |
| chr1_2 | exon | 66720508 | 66721222 | 66720508 | ID=Msa0086130-mRNA-1:exon:22509;Parent=Msa0086130-mRNA-1 |
| chr1_2 | exon | 66721453 | 66721524 | 66721453 | ID=Msa0086130-mRNA-1:exon:22510;Parent=Msa0086130-mRNA-1 |
| chr1_2 | exon | 66722447 | 66722476 | 66722447 | ID=Msa0086130-mRNA-1:exon:22511;Parent=Msa0086130-mRNA-1 |
| chr1_2 | exon | 66725148 | 66725636 | 66725148 | ID=Msa0086130-mRNA-1:exon:22512;Parent=Msa0086130-mRNA-1 |
| chr1_2 | exon | 66725659 | 66726045 | 66725659 | ID=Msa0086130-mRNA-1:exon:22513;Parent=Msa0086130-mRNA-1 |
| chr1_2 | five_prime_UTR | 66720508 | 66720661 | 66720508 | ID=Msa0086130-mRNA-1:five_prime_utr;Parent=Msa0086130-mRNA-1 |
| chr1_2 | CDS | 66720662 | 66721222 | 66720662 | ID=Msa0086130-mRNA-1:cds;Parent=Msa0086130-mRNA-1 |
| chr1_2 | CDS | 66721453 | 66721524 | 66721453 | ID=Msa0086130-mRNA-1:cds;Parent=Msa0086130-mRNA-1 |
| chr1_2 | CDS | 66722447 | 66722476 | 66722447 | ID=Msa0086130-mRNA-1:cds;Parent=Msa0086130-mRNA-1 |
| chr1_2 | CDS | 66725148 | 66725228 | 66725148 | ID=Msa0086130-mRNA-1:cds;Parent=Msa0086130-mRNA-1 |
| chr1_2 | three_prime_UTR | 66725229 | 66725636 | 66725229 | ID=Msa0086130-mRNA-1:three_prime_utr;Parent=Msa0086130-mRNA-1 |
| chr1_2 | three_prime_UTR | 66725659 | 66726045 | 66725659 | ID=Msa0086130-mRNA-1:three_prime_utr;Parent=Msa0086130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
