AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087850 MtrunA17_Chr2g0281861 78.088 251 16 3 1 212 1 251 1.69e-135 380
Msa1087850 MtrunA17_Chr4g0047521 64.940 251 46 5 1 212 1 248 3.12e-104 300
Msa1087850 MtrunA17_Chr3g0104651 47.325 243 88 4 10 212 13 255 1.76e-71 218
Msa1087850 MtrunA17_Chr4g0006201 50.431 232 76 3 10 202 6 237 7.91e-71 216
Msa1087850 MtrunA17_Chr7g0242261 48.718 234 80 4 5 198 16 249 2.88e-65 202
Msa1087850 MtrunA17_Chr8g0376861 36.400 250 101 6 14 211 10 253 7.23e-42 142
Msa1087850 MtrunA17_Chr3g0123161 35.827 254 99 7 14 211 13 258 9.66e-38 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087850 AT3G47160.1 51.037 241 77 4 13 212 5 245 1.66e-79 238
Msa1087850 AT3G47160.2 48.617 253 77 5 13 212 5 257 7.09e-76 229
Msa1087850 AT5G01520.1 48.523 237 83 4 10 207 1 237 1.28e-73 223
Msa1087850 AT5G58787.1 51.452 241 73 5 13 212 5 242 1.04e-70 216
Msa1087850 AT5G58787.2 50.885 226 82 7 13 212 5 227 3.01e-63 196
Msa1087850 AT3G47160.3 47.596 208 68 4 46 212 1 208 6.10e-61 189
Msa1087850 AT5G58787.3 47.619 210 81 7 29 212 2 208 1.81e-51 165
Msa1087850 AT5G01520.2 44.848 165 60 3 10 143 1 165 1.60e-43 144
Msa1087850 AT1G24440.1 38.367 245 102 7 13 211 9 250 1.21e-40 139
Msa1087850 AT1G13195.1 37.238 239 104 5 14 207 16 253 2.72e-40 138
Msa1087850 AT1G13195.2 43.624 149 73 3 69 207 68 215 1.05e-32 118
Msa1087850 AT1G24440.2 42.208 154 73 3 71 211 68 218 1.13e-32 117

Find 67 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCCTCTTATGATATTA+AGG 0.242881 7_3:-622354 Msa1087850:three_prime_UTR
CATATAATCTACCTTTATAT+TGG 0.260470 7_3:+622227 None:intergenic
AAAGTCTGCATTCAACTATT+TGG 0.271531 7_3:+622197 None:intergenic
GAGAGTCATAAGGATCAAAA+AGG 0.298294 7_3:+622635 None:intergenic
AACTCAAGGCTGGAATCTTC+TGG 0.300509 7_3:+622479 None:intergenic
TATAAACTTTGAATGTAATC+TGG 0.341065 7_3:-622545 Msa1087850:three_prime_UTR
TGCAATCTTGCTGGAGCCCT+TGG 0.344245 7_3:-626194 Msa1087850:CDS
TTGTTGTGGTTACTATTTCA+AGG 0.358630 7_3:-622176 Msa1087850:three_prime_UTR
AAAAGAAATTTACAAGGTAT+TGG 0.363016 7_3:+627323 None:intergenic
TTTAAGACTGTCACGACAAA+AGG 0.370109 7_3:+622789 None:intergenic
TGTACATGAAAAGCCTTCTA+AGG 0.378666 7_3:+622689 None:intergenic
AGAAGAGTGTGGAATATGTA+TGG 0.390272 7_3:-625564 Msa1087850:CDS
GAGTAAACTCGGGCGATCTC+TGG 0.395134 7_3:-622765 Msa1087850:CDS
AAAAGAAACAAGTGCGCTGC+TGG 0.395977 7_3:+626236 None:intergenic
TGGACAGATTGCAATCTTGC+TGG 0.408751 7_3:-626203 Msa1087850:intron
ACTATGAAACTTGTTGTTGT+TGG 0.410368 7_3:-627470 Msa1087850:five_prime_UTR
TAGACTATGAACCAATATAA+AGG 0.423597 7_3:-622238 Msa1087850:three_prime_UTR
TCTGGATATTCACCGATAGT+AGG 0.429327 7_3:-622747 Msa1087850:CDS
TAACAAGAGAGAACCTTAGA+AGG 0.432085 7_3:-622702 Msa1087850:CDS
AAGTGGTGGTTCTTCTTCCA+TGG 0.437052 7_3:-627397 Msa1087850:CDS
CACAGAAATGTGTTCTTTGA+TGG 0.446529 7_3:-622589 Msa1087850:three_prime_UTR
ATTCACCTTAATATCATAAG+AGG 0.459611 7_3:+622349 None:intergenic
TTGTTGTAGTTATTGTTCCA+AGG 0.471942 7_3:-622140 None:intergenic
GTGTTCTTTGATGGGTGGTT+CGG 0.474646 7_3:-622580 Msa1087850:three_prime_UTR
ATCTTTGATCATGAATGCAT+TGG 0.478399 7_3:-622294 Msa1087850:three_prime_UTR
AGTTGGTCATGAAGTTGAAA+TGG 0.483667 7_3:-622449 Msa1087850:three_prime_UTR
TGGTTCATAGTCTAAGTTGT+TGG 0.484833 7_3:+622247 None:intergenic
TTAGAATTCTTAATAATCCA+AGG 0.493296 7_3:+626177 None:intergenic
CAGTCTTAAAAGAGTAAACT+CGG 0.499948 7_3:-622776 Msa1087850:CDS
TTAAGACTGTCACGACAAAA+GGG 0.503150 7_3:+622790 None:intergenic
TGTTGTGGTTACTATTTCAA+GGG 0.504413 7_3:-622175 Msa1087850:three_prime_UTR
TGTTGTAGTTATTGTTCCAA+GGG 0.504529 7_3:-622139 None:intergenic
GTGGTTCTTCTTCCATGGGA+AGG 0.507770 7_3:-627392 Msa1087850:CDS
ATTAAGAATTCTAATTTACA+AGG 0.511384 7_3:-626168 Msa1087850:intron
TATCTTAAGTGAGAGTCATA+AGG 0.513554 7_3:+622625 None:intergenic
GCCTTGAGTTTGCGATGAGT+TGG 0.514298 7_3:-622466 Msa1087850:three_prime_UTR
ACTCATCGCAAACTCAAGGC+TGG 0.525194 7_3:+622469 None:intergenic
TGAGGAAACATGTACATAAG+TGG 0.527124 7_3:-627414 Msa1087850:exon
CTGGATATTCACCGATAGTA+GGG 0.527934 7_3:-622746 Msa1087850:CDS
TCTTTGTTACAACTTGAAAG+AGG 0.536875 7_3:-625695 Msa1087850:CDS
AAAACAGAAGGTTGTATGCA+TGG 0.538430 7_3:-625651 Msa1087850:CDS
TTTGAAAGAGAAGAAGAGTG+TGG 0.544267 7_3:-625575 Msa1087850:CDS
TTGATCATGAATGCATTGGA+TGG 0.551447 7_3:-622290 Msa1087850:three_prime_UTR
GTCTACTATGTCCCTACTAT+CGG 0.552253 7_3:+622735 None:intergenic
CACATGACATGGTTGCAGTT+AGG 0.552857 7_3:+625518 None:intergenic
AGTGGTGGTTCTTCTTCCAT+GGG 0.553651 7_3:-627396 Msa1087850:CDS
TCTTTGATGGGTGGTTCGGA+TGG 0.557204 7_3:-622576 Msa1087850:three_prime_UTR
AGGGATTCTGGTATGATCAA+AGG 0.560502 7_3:+622655 None:intergenic
AGCATTTCAGGCACATGACA+TGG 0.568729 7_3:+625507 None:intergenic
TTCCTTAAAAGACCTTCCCA+TGG 0.575494 7_3:+627380 None:intergenic
ACCAACTCATCGCAAACTCA+AGG 0.575881 7_3:+622465 None:intergenic
CTGGAATCTTCTGGAAGACG+TGG 0.580626 7_3:+622488 None:intergenic
AGATTGAATTACTTATCAAG+AGG 0.589731 7_3:-622387 Msa1087850:three_prime_UTR
TAGAATTCTTAATAATCCAA+GGG 0.590750 7_3:+626178 None:intergenic
CTTTCAAGTTGTAACAAAGA+CGG 0.593343 7_3:+625698 None:intergenic
CACGCACCATCGTATTCCCT+CGG 0.609698 7_3:+626284 None:intergenic
ACAGAAATGTGTTCTTTGAT+GGG 0.615943 7_3:-622588 Msa1087850:three_prime_UTR
TAGTAGGGACATAGTAGACA+TGG 0.618868 7_3:-622731 Msa1087850:CDS
TAAGTAATTCAATCTGTACA+AGG 0.625817 7_3:+622395 None:intergenic
GAAATGTGTTCTTTGATGGG+TGG 0.628752 7_3:-622585 Msa1087850:three_prime_UTR
TAAGACTGTCACGACAAAAG+GGG 0.632510 7_3:+622791 None:intergenic
GTTGAATGCAGACTTTGTTG+TGG 0.647394 7_3:-622190 Msa1087850:three_prime_UTR
GTATCGTAGAAGAGAAGACG+AGG 0.670479 7_3:-625624 Msa1087850:CDS
AGAAGGTTGTATGCATGGAG+CGG 0.676580 7_3:-625646 Msa1087850:CDS
GGAAACATGTACATAAGTGG+TGG 0.683193 7_3:-627411 Msa1087850:exon
AGTCTTAAAAGAGTAAACTC+GGG 0.691812 7_3:-622775 Msa1087850:CDS
AAGAGGTGTCACTGATGCTG+AGG 0.697146 7_3:-625678 Msa1087850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTTTATTATTTT+TGG - chr7_3:622416-622435 Msa1087850:three_prime_UTR 0.0%
!! GTTAAAAAAAATTAAGATAA+AGG + chr7_3:623836-623855 None:intergenic 10.0%
!! TCAATATTATTTATTACATA+TGG - chr7_3:624704-624723 Msa1087850:intron 10.0%
!!! AACTTAAAATATTCTTTTTA+AGG - chr7_3:626463-626482 Msa1087850:intron 10.0%
!!! ATCATGAGTTATTTTTATTT+TGG - chr7_3:622445-622464 Msa1087850:three_prime_UTR 15.0%
!!! TTTATTTTGGAATTATTTTC+TGG - chr7_3:622458-622477 Msa1087850:three_prime_UTR 15.0%
!!! TTATTTTGGAATTATTTTCT+GGG - chr7_3:622459-622478 Msa1087850:three_prime_UTR 15.0%
!!! ATTTTTCTTTTCCATAAATA+TGG - chr7_3:622526-622545 Msa1087850:three_prime_UTR 15.0%
!! TTATAACTTGATCATATAAT+TGG - chr7_3:623298-623317 Msa1087850:intron 15.0%
!! TATAACTTGATCATATAATT+GGG - chr7_3:623299-623318 Msa1087850:intron 15.0%
!! ATTAAGAATTCTAATTTACA+AGG - chr7_3:623458-623477 Msa1087850:intron 15.0%
!! TTATAAAAATAACTTAGACA+TGG - chr7_3:623703-623722 Msa1087850:intron 15.0%
!! TTCAGAACTAAATTAATTTA+AGG + chr7_3:624327-624346 None:intergenic 15.0%
!! GTAATAAATAATATTGAGAT+TGG + chr7_3:624701-624720 None:intergenic 15.0%
!!! AAAATACGAATCTTTAAAAT+TGG + chr7_3:624781-624800 None:intergenic 15.0%
!! GAAATCTAATAAACTTAATT+AGG + chr7_3:625739-625758 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGATGCA+TGG + chr7_3:625906-625925 None:intergenic 15.0%
!! AAAAAAATACATATTATCTG+TGG - chr7_3:625919-625938 Msa1087850:intron 15.0%
!! AAAAAATACATATTATCTGT+GGG - chr7_3:625920-625939 Msa1087850:intron 15.0%
!!! ACATTTTTTTTTTTTTTTGC+AGG - chr7_3:626792-626811 Msa1087850:intron 15.0%
!!! AAAAGAAAAACAGTATTTTG+AGG - chr7_3:622194-622213 Msa1087850:three_prime_UTR 20.0%
!! AAAAGAAATTTACAAGGTAT+TGG + chr7_3:622306-622325 None:intergenic 20.0%
!!! TTTTTTAGTTGTTTTCTTGA+AGG - chr7_3:622373-622392 Msa1087850:three_prime_UTR 20.0%
!!! TTTTTAGTTGTTTTCTTGAA+GGG - chr7_3:622374-622393 Msa1087850:three_prime_UTR 20.0%
!!! TATTTTGGAATTATTTTCTG+GGG - chr7_3:622460-622479 Msa1087850:three_prime_UTR 20.0%
!! GAACCAAAAAAAAAAAATCA+GGG + chr7_3:622498-622517 None:intergenic 20.0%
!! TGAACCAAAAAAAAAAAATC+AGG + chr7_3:622499-622518 None:intergenic 20.0%
!! TAGAATTCTTAATAATCCAA+GGG + chr7_3:623451-623470 None:intergenic 20.0%
!! TTAGAATTCTTAATAATCCA+AGG + chr7_3:623452-623471 None:intergenic 20.0%
!! TAGCTTATATGAAAAAAGTT+TGG - chr7_3:623663-623682 Msa1087850:intron 20.0%
!! CCATATAAAAAGAAATCATA+CGG + chr7_3:624288-624307 None:intergenic 20.0%
!! AGATAAAGAAGAATTTAACA+TGG + chr7_3:624829-624848 None:intergenic 20.0%
!! ACAATTCAAAACTAATGATT+TGG + chr7_3:624881-624900 None:intergenic 20.0%
!! TATAATACCATTATGAAAGA+AGG - chr7_3:625084-625103 Msa1087850:intron 20.0%
!!! GATATGAAATAGCTTTATAA+AGG - chr7_3:625634-625653 Msa1087850:CDS 20.0%
!! ATTAATTACTAATGAGAATC+AGG - chr7_3:625785-625804 Msa1087850:intron 20.0%
!! AAAAATACATATTATCTGTG+GGG - chr7_3:625921-625940 Msa1087850:intron 20.0%
!!! TTGGTATTTGTTTTATTGAT+CGG - chr7_3:626430-626449 Msa1087850:intron 20.0%
!! TATAAACTTTGAATGTAATC+TGG - chr7_3:627081-627100 Msa1087850:intron 20.0%
!! CATATAATCTACCTTTATAT+TGG + chr7_3:627402-627421 None:intergenic 20.0%
! GAAGGAAAAAGAAATTTACA+AGG + chr7_3:622312-622331 None:intergenic 25.0%
! GAGAATTGAAAGAAAAAAGA+AGG + chr7_3:622330-622349 None:intergenic 25.0%
!!! AAGCCCTGATTTTTTTTTTT+TGG - chr7_3:622492-622511 Msa1087850:three_prime_UTR 25.0%
!! TTTCTTTTCCATAAATATGG+TGG - chr7_3:622529-622548 Msa1087850:three_prime_UTR 25.0%
! TAAATTCACCACCATATTTA+TGG + chr7_3:622540-622559 None:intergenic 25.0%
! TTTATTTCACTGCAAATTCA+TGG - chr7_3:622556-622575 Msa1087850:three_prime_UTR 25.0%
! CAGTTATGAATAAATTCTTG+TGG - chr7_3:622655-622674 Msa1087850:CDS 25.0%
!!! ATTCTTGTGGAATTTTTCAA+TGG - chr7_3:622668-622687 Msa1087850:CDS 25.0%
!!! TTTGTTTTGTTTTGTGTGAA+TGG - chr7_3:622919-622938 Msa1087850:intron 25.0%
! ATAGATCAGGAAACAATAAT+TGG + chr7_3:623048-623067 None:intergenic 25.0%
! AATTATGTTAAGACTTTCGA+CGG - chr7_3:623225-623244 Msa1087850:intron 25.0%
! GAATTCTAATTTACAAGGTT+AGG - chr7_3:623463-623482 Msa1087850:intron 25.0%
!! CATTATGAACTGAGAAATTT+TGG - chr7_3:623506-623525 Msa1087850:intron 25.0%
! ATGAAAGAAAAGCAAGTATT+AGG - chr7_3:623791-623810 Msa1087850:intron 25.0%
! TGAAAGAAAAGCAAGTATTA+GGG - chr7_3:623792-623811 Msa1087850:intron 25.0%
!!! GTTTTAAGAAGTATGAAGTT+TGG - chr7_3:624209-624228 Msa1087850:intron 25.0%
!! CCGTATGATTTCTTTTTATA+TGG - chr7_3:624285-624304 Msa1087850:intron 25.0%
! TCACATACATGATTCTATAT+AGG - chr7_3:624347-624366 Msa1087850:intron 25.0%
!! TCGTAAGTCTTGTATTAATT+CGG - chr7_3:624401-624420 Msa1087850:intron 25.0%
!! TTGTATTAATTCGGTTTGTT+TGG - chr7_3:624410-624429 Msa1087850:intron 25.0%
! ACTTAAAGATGCTCAAAAAA+TGG - chr7_3:624589-624608 Msa1087850:intron 25.0%
! CTTAAAGATGCTCAAAAAAT+GGG - chr7_3:624590-624609 Msa1087850:intron 25.0%
! ACAAGTATCAATATGAGATT+CGG + chr7_3:624631-624650 None:intergenic 25.0%
!!! GAATCTTTAAAATTGGAGTT+GGG + chr7_3:624774-624793 None:intergenic 25.0%
!!! ATCATTAGTTTTGAATTGTG+TGG - chr7_3:624882-624901 Msa1087850:intron 25.0%
! TAAGTATATATGTCATGCAT+AGG + chr7_3:625064-625083 None:intergenic 25.0%
! TCAAATCATGGTTTGAATTT+CGG + chr7_3:625480-625499 None:intergenic 25.0%
!!! TTTTAAAATGGCTCAAATCA+TGG + chr7_3:625492-625511 None:intergenic 25.0%
! AAAGGTTATTAAAATCGAGT+TGG + chr7_3:625579-625598 None:intergenic 25.0%
!!! AACTCGATTTTAATAACCTT+TGG - chr7_3:625578-625597 Msa1087850:CDS 25.0%
! TGAGATTACAATGATTTGAA+AGG - chr7_3:625669-625688 Msa1087850:CDS 25.0%
!!! ATTTTCTTCTGGAACTATTA+CGG - chr7_3:625704-625723 Msa1087850:CDS 25.0%
! TATATACATATTGTCTGAGT+GGG - chr7_3:625867-625886 Msa1087850:intron 25.0%
!!! TTTTTTTTTGATGCATGGTA+GGG + chr7_3:625901-625920 None:intergenic 25.0%
!!! TTTTTTTTTTGATGCATGGT+AGG + chr7_3:625902-625921 None:intergenic 25.0%
!! GAGTTATTTATAGCCTTTTT+GGG - chr7_3:626022-626041 Msa1087850:intron 25.0%
! TGAATGATAAGTATTCTATG+TGG - chr7_3:626359-626378 Msa1087850:intron 25.0%
! TTAGGCTTTGCATATTATAT+TGG - chr7_3:626411-626430 Msa1087850:intron 25.0%
!!! TTTTAATTATAGTGATGTCC+TGG - chr7_3:626488-626507 Msa1087850:intron 25.0%
! CAATGTTCATATATCTTATG+TGG - chr7_3:626520-626539 Msa1087850:intron 25.0%
! AAAACAAAGACATTTGAAAG+AGG + chr7_3:626557-626576 None:intergenic 25.0%
! TAAGTAATTCAATCTGTACA+AGG + chr7_3:627234-627253 None:intergenic 25.0%
! AGATTGAATTACTTATCAAG+AGG - chr7_3:627239-627258 Msa1087850:intron 25.0%
! ATTCACCTTAATATCATAAG+AGG + chr7_3:627280-627299 None:intergenic 25.0%
!!! ATCAAAGATTTGTTTTAGGA+GGG + chr7_3:627321-627340 None:intergenic 25.0%
!!! CATGATCAAAGATTTGTTTT+AGG + chr7_3:627325-627344 None:intergenic 25.0%
! TAGACTATGAACCAATATAA+AGG - chr7_3:627388-627407 Msa1087850:CDS 25.0%
!! ACTATGAAACTTGTTGTTGT+TGG - chr7_3:622156-622175 Msa1087850:three_prime_UTR 30.0%
AGTCAAAACTTAGACAACTT+TGG - chr7_3:622804-622823 Msa1087850:CDS 30.0%
!!! ACTCAGATGGAGAATTTTTT+TGG - chr7_3:622848-622867 Msa1087850:intron 30.0%
!!! ATTTTGTTTTCTCCACCTTA+TGG - chr7_3:622947-622966 Msa1087850:intron 30.0%
TGCAATGCATATTATAGATC+AGG + chr7_3:623061-623080 None:intergenic 30.0%
!!! TTTTTTCGCTCAATGTTTCA+AGG - chr7_3:623104-623123 Msa1087850:intron 30.0%
ATTATGTTAAGACTTTCGAC+GGG - chr7_3:623226-623245 Msa1087850:intron 30.0%
!!! TGTTTCTTTTTCTGGTTCAA+TGG - chr7_3:623403-623422 Msa1087850:intron 30.0%
! ATTTACAAGGTTAGGCATTT+TGG - chr7_3:623471-623490 Msa1087850:intron 30.0%
ACTTATTTGAGCTTACTTAC+TGG - chr7_3:623548-623567 Msa1087850:intron 30.0%
! TTTTCTTTCATGTGTAGACA+TGG + chr7_3:623782-623801 None:intergenic 30.0%
! TGAAATTCTGTATTGATCAG+CGG - chr7_3:623897-623916 Msa1087850:intron 30.0%
!! CTTTCAAGTTGTAACAAAGA+CGG + chr7_3:623931-623950 None:intergenic 30.0%
TCTTTGTTACAACTTGAAAG+AGG - chr7_3:623931-623950 Msa1087850:intron 30.0%
!!! CATTCCTTATTTTACGATCA+TGG - chr7_3:624179-624198 Msa1087850:intron 30.0%
CTTATGCAAAATCTGAATGA+TGG + chr7_3:624469-624488 None:intergenic 30.0%
TCATATATATGGTAAAGCAC+AGG + chr7_3:624509-624528 None:intergenic 30.0%
TAAGTCATAGCTTAGAAACT+AGG + chr7_3:624574-624593 None:intergenic 30.0%
!! CGAATCTTTAAAATTGGAGT+TGG + chr7_3:624775-624794 None:intergenic 30.0%
TAAATGATGTGATCTGATGT+AGG - chr7_3:624800-624819 Msa1087850:intron 30.0%
AAATGATGTGATCTGATGTA+GGG - chr7_3:624801-624820 Msa1087850:intron 30.0%
CTTGAGATTCTTGATAAACT+TGG - chr7_3:624989-625008 Msa1087850:intron 30.0%
CATTATGAAAGAAGGAAACA+GGG - chr7_3:625092-625111 Msa1087850:intron 30.0%
AAAGAGGTTCTTCTTTACTT+AGG - chr7_3:625610-625629 Msa1087850:CDS 30.0%
!! TGAAATAGCTTTATAAAGGC+CGG - chr7_3:625638-625657 Msa1087850:CDS 30.0%
! AGAATCAGGCACAATATTTT+AGG - chr7_3:625799-625818 Msa1087850:intron 30.0%
ACAGAATCTAAATACAGTGT+TGG + chr7_3:625830-625849 None:intergenic 30.0%
CTATATACATATTGTCTGAG+TGG - chr7_3:625866-625885 Msa1087850:intron 30.0%
ATATACATATTGTCTGAGTG+GGG - chr7_3:625868-625887 Msa1087850:intron 30.0%
!!! TTTTTTTTGATGCATGGTAG+GGG + chr7_3:625900-625919 None:intergenic 30.0%
TGAGTACAATACTGAAACTA+GGG - chr7_3:625957-625976 Msa1087850:intron 30.0%
! GGAGTTATTTATAGCCTTTT+TGG - chr7_3:626021-626040 Msa1087850:intron 30.0%
TTGTAGGATAATGCTCTAAT+TGG - chr7_3:626314-626333 Msa1087850:intron 30.0%
CATACAGCTTTCAATTAAAC+AGG + chr7_3:626765-626784 None:intergenic 30.0%
CAGTCTTAAAAGAGTAAACT+CGG - chr7_3:626850-626869 Msa1087850:intron 30.0%
AGTCTTAAAAGAGTAAACTC+GGG - chr7_3:626851-626870 Msa1087850:intron 30.0%
AGAGTCATAAGGATCAAAAA+GGG + chr7_3:626993-627012 None:intergenic 30.0%
TATCTTAAGTGAGAGTCATA+AGG + chr7_3:627004-627023 None:intergenic 30.0%
ACAGAAATGTGTTCTTTGAT+GGG - chr7_3:627038-627057 Msa1087850:intron 30.0%
ATGTGCCTCTTATGATATTA+AGG - chr7_3:627272-627291 Msa1087850:intron 30.0%
!!! GATCAAAGATTTGTTTTAGG+AGG + chr7_3:627322-627341 None:intergenic 30.0%
ATCTTTGATCATGAATGCAT+TGG - chr7_3:627332-627351 Msa1087850:intron 30.0%
AAAGTCTGCATTCAACTATT+TGG + chr7_3:627432-627451 None:intergenic 30.0%
TTGTTGTGGTTACTATTTCA+AGG - chr7_3:627450-627469 Msa1087850:five_prime_UTR 30.0%
TGTTGTGGTTACTATTTCAA+GGG - chr7_3:627451-627470 Msa1087850:five_prime_UTR 30.0%
TGAGGAAACATGTACATAAG+TGG - chr7_3:622212-622231 Msa1087850:three_prime_UTR 35.0%
! TCACTGCAAATTCATGGTTT+TGG - chr7_3:622562-622581 Msa1087850:three_prime_UTR 35.0%
ACTCATCAAGAAAAAGTTGC+TGG + chr7_3:623271-623290 None:intergenic 35.0%
ATCATATAATTGGGCGTGTA+GGG - chr7_3:623308-623327 Msa1087850:intron 35.0%
!!! AGGTTAGGCATTTTGGTTTT+TGG - chr7_3:623478-623497 Msa1087850:intron 35.0%
! CTAAATTTTCCTCATGCTGT+AGG - chr7_3:623735-623754 Msa1087850:intron 35.0%
GCAAGTATTAGGGAATTCTA+TGG - chr7_3:623802-623821 Msa1087850:intron 35.0%
! AGTTTGCATTTTACTGTGTG+TGG - chr7_3:623861-623880 Msa1087850:intron 35.0%
TGCTGAGGATAAAAAACAGA+AGG - chr7_3:623963-623982 Msa1087850:intron 35.0%
AAAACAGAAGGTTGTATGCA+TGG - chr7_3:623975-623994 Msa1087850:intron 35.0%
TTTGAAAGAGAAGAAGAGTG+TGG - chr7_3:624051-624070 Msa1087850:intron 35.0%
! AGAAGAGTGTGGAATATGTA+TGG - chr7_3:624062-624081 Msa1087850:intron 35.0%
AATAAGGAATGTGTGTGTGA+GGG + chr7_3:624170-624189 None:intergenic 35.0%
AAATAAGGAATGTGTGTGTG+AGG + chr7_3:624171-624190 None:intergenic 35.0%
CAAGCCATGATCGTAAAATA+AGG + chr7_3:624186-624205 None:intergenic 35.0%
!! ATTTTACGATCATGGCTTGT+TGG - chr7_3:624187-624206 Msa1087850:intron 35.0%
CCTGTTAGGCATCATATATA+TGG + chr7_3:624520-624539 None:intergenic 35.0%
CCATATATATGATGCCTAAC+AGG - chr7_3:624517-624536 Msa1087850:intron 35.0%
ACAACATAACCCTCTTCTTA+CGG + chr7_3:624545-624564 None:intergenic 35.0%
CAGTATTACACACACATTCA+TGG - chr7_3:624666-624685 Msa1087850:intron 35.0%
ATTACATATGGACTTGAGAG+AGG - chr7_3:624716-624735 Msa1087850:intron 35.0%
TTACATATGGACTTGAGAGA+GGG - chr7_3:624717-624736 Msa1087850:intron 35.0%
TAAAATTGGAGTTGGGTAAG+TGG + chr7_3:624767-624786 None:intergenic 35.0%
CCTGTTTCCTTCTTTCATAA+TGG + chr7_3:625094-625113 None:intergenic 35.0%
CCATTATGAAAGAAGGAAAC+AGG - chr7_3:625091-625110 Msa1087850:intron 35.0%
GTGTTCTCACTTACTTTACT+TGG + chr7_3:625149-625168 None:intergenic 35.0%
AGTGAGAACACATTCATTGA+AGG - chr7_3:625158-625177 Msa1087850:intron 35.0%
AACTGTTTGGAAACAAGGTT+AGG + chr7_3:625413-625432 None:intergenic 35.0%
TGAATTTCGGAGACAAGAAA+GGG + chr7_3:625467-625486 None:intergenic 35.0%
TTGAATTTCGGAGACAAGAA+AGG + chr7_3:625468-625487 None:intergenic 35.0%
!! GAAATAGCTTTATAAAGGCC+GGG - chr7_3:625639-625658 Msa1087850:CDS 35.0%
TATACATATTGTCTGAGTGG+GGG - chr7_3:625869-625888 Msa1087850:intron 35.0%
GTGAGTACAATACTGAAACT+AGG - chr7_3:625956-625975 Msa1087850:intron 35.0%
CTAGGGTTTAGTATCTGATT+AGG - chr7_3:625974-625993 Msa1087850:intron 35.0%
AGGCTATAAATAACTCCCTT+GGG + chr7_3:626018-626037 None:intergenic 35.0%
AAGGCTATAAATAACTCCCT+TGG + chr7_3:626019-626038 None:intergenic 35.0%
TATGCGTTTCTACCTATCTT+GGG + chr7_3:626079-626098 None:intergenic 35.0%
ATATGCGTTTCTACCTATCT+TGG + chr7_3:626080-626099 None:intergenic 35.0%
AGCCAGAATATCCATATTTG+GGG + chr7_3:626107-626126 None:intergenic 35.0%
CAGCCAGAATATCCATATTT+GGG + chr7_3:626108-626127 None:intergenic 35.0%
TCAGCCAGAATATCCATATT+TGG + chr7_3:626109-626128 None:intergenic 35.0%
GACCACCAATACTCAAATAA+GGG + chr7_3:626231-626250 None:intergenic 35.0%
ATTATCCTACAAATGAACCC+TGG + chr7_3:626306-626325 None:intergenic 35.0%
ATGCTCTAATTGGAACTTAC+TGG - chr7_3:626324-626343 Msa1087850:intron 35.0%
TGAACATTGAAAACAGTTCC+AGG + chr7_3:626509-626528 None:intergenic 35.0%
GAAACTTGGTTAGACAACTA+GGG + chr7_3:626598-626617 None:intergenic 35.0%
CTAGTTGTCTAACCAAGTTT+CGG - chr7_3:626597-626616 Msa1087850:intron 35.0%
AGAAAACAATCACCGAAACT+TGG + chr7_3:626612-626631 None:intergenic 35.0%
CTTGGTACACAACAAAATTG+TGG - chr7_3:626705-626724 Msa1087850:intron 35.0%
TTAAGACTGTCACGACAAAA+GGG + chr7_3:626839-626858 None:intergenic 35.0%
! TTTAAGACTGTCACGACAAA+AGG + chr7_3:626840-626859 None:intergenic 35.0%
TAACAAGAGAGAACCTTAGA+AGG - chr7_3:626924-626943 Msa1087850:intron 35.0%
TGTACATGAAAAGCCTTCTA+AGG + chr7_3:626940-626959 None:intergenic 35.0%
TAAGGATCAAAAAGGGATTC+TGG + chr7_3:626986-627005 None:intergenic 35.0%
GAGAGTCATAAGGATCAAAA+AGG + chr7_3:626994-627013 None:intergenic 35.0%
CACAGAAATGTGTTCTTTGA+TGG - chr7_3:627037-627056 Msa1087850:intron 35.0%
AGTTGGTCATGAAGTTGAAA+TGG - chr7_3:627177-627196 Msa1087850:intron 35.0%
!!! AAGATTTGTTTTAGGAGGGA+GGG + chr7_3:627317-627336 None:intergenic 35.0%
!!! AAAGATTTGTTTTAGGAGGG+AGG + chr7_3:627318-627337 None:intergenic 35.0%
TTGATCATGAATGCATTGGA+TGG - chr7_3:627336-627355 Msa1087850:CDS 35.0%
TGGTTCATAGTCTAAGTTGT+TGG + chr7_3:627382-627401 None:intergenic 35.0%
GGAAACATGTACATAAGTGG+TGG - chr7_3:622215-622234 Msa1087850:three_prime_UTR 40.0%
! TTCCATGGGAAGGTCTTTTA+AGG - chr7_3:622244-622263 Msa1087850:three_prime_UTR 40.0%
TTCCTTAAAAGACCTTCCCA+TGG + chr7_3:622249-622268 None:intergenic 40.0%
! AACAGTGTCTCTGTCTTGTT+GGG - chr7_3:622610-622629 Msa1087850:exon 40.0%
GTACAACACAAAGGTAGTGA+AGG + chr7_3:622830-622849 None:intergenic 40.0%
ACCTTTGTGTTGTACTCAGA+TGG - chr7_3:622835-622854 Msa1087850:intron 40.0%
TCCATCTGAGTACAACACAA+AGG + chr7_3:622839-622858 None:intergenic 40.0%
TTTCTCCACCTTATGGTATG+TGG - chr7_3:622954-622973 Msa1087850:intron 40.0%
TTCTCCACCTTATGGTATGT+GGG - chr7_3:622955-622974 Msa1087850:intron 40.0%
TGTTAGCAGGGATAGTACTT+TGG - chr7_3:622989-623008 Msa1087850:intron 40.0%
CTGTATTTGTGATGAGTCTC+TGG - chr7_3:623133-623152 Msa1087850:intron 40.0%
TGATGAGTCTCTGGTGAAAT+TGG - chr7_3:623142-623161 Msa1087850:intron 40.0%
! GGTGAAATTGGACTAGAGAA+AGG - chr7_3:623154-623173 Msa1087850:intron 40.0%
TCAAGAAAAAGTTGCTGGAG+AGG + chr7_3:623266-623285 None:intergenic 40.0%
GATCATATAATTGGGCGTGT+AGG - chr7_3:623307-623326 Msa1087850:intron 40.0%
!! AGCGCACTTGTTTCTTTTTC+TGG - chr7_3:623395-623414 Msa1087850:intron 40.0%
GCATAAACACTTGTCAGACT+GGG - chr7_3:623570-623589 Msa1087850:intron 40.0%
ACCATTCATGGTAGCATTTC+AGG + chr7_3:624134-624153 None:intergenic 40.0%
! CAGATTTTGCATAAGCGACA+TGG - chr7_3:624474-624493 Msa1087850:intron 40.0%
! TTTTGAATTGTGTGGTCCAG+TGG - chr7_3:624890-624909 Msa1087850:intron 40.0%
GACTTCACTAAAGGGTGAAA+GGG + chr7_3:624925-624944 None:intergenic 40.0%
GCAAGTGAGAACACAATCAT+TGG - chr7_3:625200-625219 Msa1087850:intron 40.0%
GTGAGAACACAATCATTGGA+TGG - chr7_3:625204-625223 Msa1087850:intron 40.0%
GTTGCAACTGTTTGGAAACA+AGG + chr7_3:625418-625437 None:intergenic 40.0%
TGTTTCCAAACAGTTGCAAC+TGG - chr7_3:625418-625437 Msa1087850:intron 40.0%
GACTCAATTTCGCGAGTTTA+AGG + chr7_3:625546-625565 None:intergenic 40.0%
TTGTAATCTCACACTAGTCC+CGG + chr7_3:625660-625679 None:intergenic 40.0%
!!! AGCGTGTTGCTATTTTCTTC+TGG - chr7_3:625693-625712 Msa1087850:CDS 40.0%
TTAGATTCTGTCAGTCTCTC+AGG - chr7_3:625839-625858 Msa1087850:intron 40.0%
TATCTGATTAGGTCATGCCT+TGG - chr7_3:625985-626004 Msa1087850:intron 40.0%
ATCTGATTAGGTCATGCCTT+GGG - chr7_3:625986-626005 Msa1087850:intron 40.0%
ACGTAATAAGAGGCCCAAAA+AGG + chr7_3:626038-626057 None:intergenic 40.0%
GGAGTAAGTCACGTAATAAG+AGG + chr7_3:626048-626067 None:intergenic 40.0%
TACCTATCTTGGGTGACTTA+GGG + chr7_3:626069-626088 None:intergenic 40.0%
CCAGAATATCCATATTTGGG+GGG + chr7_3:626105-626124 None:intergenic 40.0%
GCCAGAATATCCATATTTGG+GGG + chr7_3:626106-626125 None:intergenic 40.0%
! GGATATTCTGGCTGAATATC+TGG - chr7_3:626114-626133 Msa1087850:intron 40.0%
GGACCACCAATACTCAAATA+AGG + chr7_3:626232-626251 None:intergenic 40.0%
AACCCAGACTGTTGTTCTTT+AGG - chr7_3:626393-626412 Msa1087850:intron 40.0%
AGCCTAAAGAACAACAGTCT+GGG + chr7_3:626398-626417 None:intergenic 40.0%
AAGCCTAAAGAACAACAGTC+TGG + chr7_3:626399-626418 None:intergenic 40.0%
CGAAACTTGGTTAGACAACT+AGG + chr7_3:626599-626618 None:intergenic 40.0%
TAAGACTGTCACGACAAAAG+GGG + chr7_3:626838-626857 None:intergenic 40.0%
TCTGGATATTCACCGATAGT+AGG - chr7_3:626879-626898 Msa1087850:intron 40.0%
CTGGATATTCACCGATAGTA+GGG - chr7_3:626880-626899 Msa1087850:intron 40.0%
GTCTACTATGTCCCTACTAT+CGG + chr7_3:626894-626913 None:intergenic 40.0%
TAGTAGGGACATAGTAGACA+TGG - chr7_3:626895-626914 Msa1087850:intron 40.0%
AGGGATTCTGGTATGATCAA+AGG + chr7_3:626974-626993 None:intergenic 40.0%
GAAATGTGTTCTTTGATGGG+TGG - chr7_3:627041-627060 Msa1087850:intron 40.0%
GTTGAATGCAGACTTTGTTG+TGG - chr7_3:627436-627455 Msa1087850:five_prime_UTR 40.0%
AAGTGGTGGTTCTTCTTCCA+TGG - chr7_3:622229-622248 Msa1087850:three_prime_UTR 45.0%
AGTGGTGGTTCTTCTTCCAT+GGG - chr7_3:622230-622249 Msa1087850:three_prime_UTR 45.0%
AGACACTGTTGATCGTTGAG+TGG + chr7_3:622600-622619 None:intergenic 45.0%
CAACAGTGTCTCTGTCTTGT+TGG - chr7_3:622609-622628 Msa1087850:exon 45.0%
! ACAGTGTCTCTGTCTTGTTG+GGG - chr7_3:622611-622630 Msa1087850:exon 45.0%
TCTCCACCTTATGGTATGTG+GGG - chr7_3:622956-622975 Msa1087850:intron 45.0%
ACAATGCCCCACATACCATA+AGG + chr7_3:622965-622984 None:intergenic 45.0%
GGCATTGTCACATGTTAGCA+GGG - chr7_3:622977-622996 Msa1087850:intron 45.0%
! TGGACTAGAGAAAGGTTTCG+AGG - chr7_3:623162-623181 Msa1087850:intron 45.0%
!! TAGGGCATCTGATTTTCCGA+GGG - chr7_3:623326-623345 Msa1087850:intron 45.0%
! GATTTTCCGAGGGAATACGA+TGG - chr7_3:623336-623355 Msa1087850:intron 45.0%
AAAAGAAACAAGTGCGCTGC+TGG + chr7_3:623393-623412 None:intergenic 45.0%
TGGACAGATTGCAATCTTGC+TGG - chr7_3:623423-623442 Msa1087850:intron 45.0%
GGCATAAACACTTGTCAGAC+TGG - chr7_3:623569-623588 Msa1087850:intron 45.0%
ATGCTGTAGGTGTATGTGGA+TGG - chr7_3:623748-623767 Msa1087850:intron 45.0%
TGCTGTAGGTGTATGTGGAT+GGG - chr7_3:623749-623768 Msa1087850:intron 45.0%
AGAAGGTTGTATGCATGGAG+CGG - chr7_3:623980-623999 Msa1087850:intron 45.0%
GTATCGTAGAAGAGAAGACG+AGG - chr7_3:624002-624021 Msa1087850:intron 45.0%
CACATGACATGGTTGCAGTT+AGG + chr7_3:624111-624130 None:intergenic 45.0%
AGCATTTCAGGCACATGACA+TGG + chr7_3:624122-624141 None:intergenic 45.0%
GCCTGAAATGCTACCATGAA+TGG - chr7_3:624130-624149 Msa1087850:intron 45.0%
!! GCAAGAGAGAGTACCATTCA+TGG + chr7_3:624146-624165 None:intergenic 45.0%
! TAACAGGCACCGTAAGAAGA+GGG - chr7_3:624533-624552 Msa1087850:intron 45.0%
AATTGGAGTTGGGTAAGTGG+TGG + chr7_3:624764-624783 None:intergenic 45.0%
GGACTTCACTAAAGGGTGAA+AGG + chr7_3:624926-624945 None:intergenic 45.0%
! GAGCAACGGACTTCACTAAA+GGG + chr7_3:624933-624952 None:intergenic 45.0%
! AGAGCAACGGACTTCACTAA+AGG + chr7_3:624934-624953 None:intergenic 45.0%
TCCTCGCATCTAAAGAGCAA+CGG + chr7_3:624947-624966 None:intergenic 45.0%
TTGCTCTTTAGATGCGAGGA+AGG - chr7_3:624947-624966 Msa1087850:intron 45.0%
CTGACTCACGATCTTCAAAC+AGG + chr7_3:625286-625305 None:intergenic 45.0%
! AGATCGTGAGTCAGCATTGA+AGG - chr7_3:625292-625311 Msa1087850:intron 45.0%
!! GAAGGCTTAGTTTGCGTTGT+TGG - chr7_3:625310-625329 Msa1087850:intron 45.0%
!!! AGACTTTTTTTCGCGTCACC+AGG - chr7_3:625339-625358 Msa1087850:intron 45.0%
!!! TTTTTTTCGCGTCACCAGGA+TGG - chr7_3:625343-625362 Msa1087850:intron 45.0%
CGCAAACAAAATCTCCATCC+TGG + chr7_3:625360-625379 None:intergenic 45.0%
TTTGCGTCATCCACGACAAT+AGG - chr7_3:625374-625393 Msa1087850:intron 45.0%
TGTCACAGAACCTATTGTCG+TGG + chr7_3:625387-625406 None:intergenic 45.0%
CTCATCCAGTTGCAACTGTT+TGG + chr7_3:625426-625445 None:intergenic 45.0%
CCTCTTTATGCTTGCTCCAA+AGG + chr7_3:625597-625616 None:intergenic 45.0%
!! CCTTTGGAGCAAGCATAAAG+AGG - chr7_3:625594-625613 Msa1087850:CDS 45.0%
CTACCTATCTTGGGTGACTT+AGG + chr7_3:626070-626089 None:intergenic 45.0%
CGCATATATCCCCCCAAATA+TGG - chr7_3:626093-626112 Msa1087850:intron 45.0%
CCCCCCAAATATGGATATTC+TGG - chr7_3:626102-626121 Msa1087850:intron 45.0%
!! GGCCCTTATTTGAGTATTGG+TGG - chr7_3:626226-626245 Msa1087850:intron 45.0%
TTAACCAAGACTCATGCTCG+GGG + chr7_3:626261-626280 None:intergenic 45.0%
CTTAACCAAGACTCATGCTC+GGG + chr7_3:626262-626281 None:intergenic 45.0%
CCTTAACCAAGACTCATGCT+CGG + chr7_3:626263-626282 None:intergenic 45.0%
CGAGCATGAGTCTTGGTTAA+GGG - chr7_3:626261-626280 Msa1087850:CDS 45.0%
GTTAAGGGCGAAGTGGTTAT+TGG - chr7_3:626276-626295 Msa1087850:CDS 45.0%
CAACAGTCTGGGTTCATACT+CGG + chr7_3:626387-626406 None:intergenic 45.0%
! TTCTTTTCTGCCTCGTGTCT+TGG - chr7_3:626687-626706 Msa1087850:intron 45.0%
TTGTTGTGTACCAAGACACG+AGG + chr7_3:626700-626719 None:intergenic 45.0%
! GTGTTCTTTGATGGGTGGTT+CGG - chr7_3:627046-627065 Msa1087850:intron 45.0%
AACTCAAGGCTGGAATCTTC+TGG + chr7_3:627150-627169 None:intergenic 45.0%
ACCAACTCATCGCAAACTCA+AGG + chr7_3:627164-627183 None:intergenic 45.0%
!!! CATTTTTTTATTTTTTAAAA+TGG + chr7_3:625504-625523 None:intergenic 5.0%
GTGGTTCTTCTTCCATGGGA+AGG - chr7_3:622234-622253 Msa1087850:three_prime_UTR 50.0%
ATGCCCCACATACCATAAGG+TGG + chr7_3:622962-622981 None:intergenic 50.0%
! GGGCATTGTCACATGTTAGC+AGG - chr7_3:622976-622995 Msa1087850:intron 50.0%
!! GTAGGGCATCTGATTTTCCG+AGG - chr7_3:623325-623344 Msa1087850:intron 50.0%
CCACATACACCTACAGCATG+AGG + chr7_3:623747-623766 None:intergenic 50.0%
CCTCATGCTGTAGGTGTATG+TGG - chr7_3:623744-623763 Msa1087850:intron 50.0%
!! AAGAGGTGTCACTGATGCTG+AGG - chr7_3:623948-623967 Msa1087850:intron 50.0%
CTCTTCTTACGGTGCCTGTT+AGG + chr7_3:624534-624553 None:intergenic 50.0%
! CTAACAGGCACCGTAAGAAG+AGG - chr7_3:624532-624551 Msa1087850:intron 50.0%
GAAAGGGCAATGATCACCAC+TGG + chr7_3:624909-624928 None:intergenic 50.0%
TCCGTTGCTCTTTAGATGCG+AGG - chr7_3:624943-624962 Msa1087850:intron 50.0%
CTGCTCGCTCGAAATAGAGA+GGG - chr7_3:625258-625277 Msa1087850:intron 50.0%
TGCTCGCTCGAAATAGAGAG+GGG - chr7_3:625259-625278 Msa1087850:intron 50.0%
TTTGATGCATGGTAGGGGCA+AGG + chr7_3:625895-625914 None:intergenic 50.0%
ATGCCTTGGGAATGATCCCA+AGG - chr7_3:625999-626018 Msa1087850:intron 50.0%
TGCCTTGGGAATGATCCCAA+GGG - chr7_3:626000-626019 Msa1087850:intron 50.0%
CTCCCTAAGTCACCCAAGAT+AGG - chr7_3:626064-626083 Msa1087850:intron 50.0%
! AGGTTCGGGCTTGATGGTTT+CGG - chr7_3:626142-626161 Msa1087850:intron 50.0%
! CTTGATGGTTTCGGGGGATA+AGG - chr7_3:626151-626170 Msa1087850:intron 50.0%
ATGGTTTCGGGGGATAAGGA+GGG - chr7_3:626155-626174 Msa1087850:intron 50.0%
GTAGGCGACGTCCTTGTATA+GGG - chr7_3:626197-626216 Msa1087850:CDS 50.0%
ACGTCCTTGTATAGGGCTAG+CGG - chr7_3:626204-626223 Msa1087850:intron 50.0%
! GCGGGCCCTTATTTGAGTAT+TGG - chr7_3:626223-626242 Msa1087850:intron 50.0%
TAACCAAGACTCATGCTCGG+GGG + chr7_3:626260-626279 None:intergenic 50.0%
CCGAGCATGAGTCTTGGTTA+AGG - chr7_3:626260-626279 Msa1087850:CDS 50.0%
AGTCTTGGTTAAGGGCGAAG+TGG - chr7_3:626269-626288 Msa1087850:CDS 50.0%
AAGGGCGAAGTGGTTATTGG+CGG - chr7_3:626279-626298 Msa1087850:CDS 50.0%
AAGTGGTTATTGGCGGTCCA+GGG - chr7_3:626286-626305 Msa1087850:CDS 50.0%
! TCTTTGATGGGTGGTTCGGA+TGG - chr7_3:627050-627069 Msa1087850:intron 50.0%
! CTGGAATCTTCTGGAAGACG+TGG + chr7_3:627141-627160 None:intergenic 50.0%
ACTCATCGCAAACTCAAGGC+TGG + chr7_3:627160-627179 None:intergenic 50.0%
GCCTTGAGTTTGCGATGAGT+TGG - chr7_3:627160-627179 Msa1087850:intron 50.0%
CACGCACCATCGTATTCCCT+CGG + chr7_3:623345-623364 None:intergenic 55.0%
TGCAATCTTGCTGGAGCCCT+TGG - chr7_3:623432-623451 Msa1087850:intron 55.0%
ATGCGAGGAAGGAGCAAGCA+AGG - chr7_3:624958-624977 Msa1087850:intron 55.0%
CGAGCGAGCAGCAAACTGAA+CGG + chr7_3:625249-625268 None:intergenic 55.0%
GCTGCTCGCTCGAAATAGAG+AGG - chr7_3:625257-625276 Msa1087850:intron 55.0%
CTCCCTTGGGATCATTCCCA+AGG + chr7_3:626005-626024 None:intergenic 55.0%
! GGTTCGGGCTTGATGGTTTC+GGG - chr7_3:626143-626162 Msa1087850:intron 55.0%
! GTTCGGGCTTGATGGTTTCG+GGG - chr7_3:626144-626163 Msa1087850:intron 55.0%
! TTCGGGCTTGATGGTTTCGG+GGG - chr7_3:626145-626164 Msa1087850:intron 55.0%
GATGGTTTCGGGGGATAAGG+AGG - chr7_3:626154-626173 Msa1087850:intron 55.0%
TGGTTTCGGGGGATAAGGAG+GGG - chr7_3:626156-626175 Msa1087850:intron 55.0%
CGTAGGCGACGTCCTTGTAT+AGG - chr7_3:626196-626215 Msa1087850:CDS 55.0%
! CGTCCTTGTATAGGGCTAGC+GGG - chr7_3:626205-626224 Msa1087850:intron 55.0%
GAAGTGGTTATTGGCGGTCC+AGG - chr7_3:626285-626304 Msa1087850:CDS 55.0%
GCGGTCCAGGGTTCATTTGT+AGG - chr7_3:626298-626317 Msa1087850:CDS 55.0%
GAGTAAACTCGGGCGATCTC+TGG - chr7_3:626861-626880 Msa1087850:intron 55.0%
AGCATGCCCTACGCAAGCGT+AGG - chr7_3:626179-626198 Msa1087850:CDS 60.0%
ACGTCGCCTACGCTTGCGTA+GGG + chr7_3:626188-626207 None:intergenic 60.0%
AGTCCCCCGAGCATGAGTCT+TGG - chr7_3:626254-626273 Msa1087850:CDS 60.0%
GACGTCGCCTACGCTTGCGT+AGG + chr7_3:626189-626208 None:intergenic 65.0%
GGGCCCGCTAGCCCTATACA+AGG + chr7_3:626211-626230 None:intergenic 65.0%
GACTCATGCTCGGGGGACTG+TGG + chr7_3:626253-626272 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 622141 627507 622141 ID=Msa1087850;Name=Msa1087850
chr7_3 mRNA 622141 627507 622141 ID=Msa1087850-mRNA-1;Parent=Msa1087850;Name=Msa1087850-mRNA-1;_AED=0.14;_eAED=0.14;_QI=80|0.25|0.4|1|0.25|0.4|5|483|212
chr7_3 exon 622141 622834 622141 ID=Msa1087850-mRNA-1:exon:341;Parent=Msa1087850-mRNA-1
chr7_3 exon 625521 625731 625521 ID=Msa1087850-mRNA-1:exon:340;Parent=Msa1087850-mRNA-1
chr7_3 exon 626169 626218 626169 ID=Msa1087850-mRNA-1:exon:339;Parent=Msa1087850-mRNA-1
chr7_3 exon 626245 626319 626245 ID=Msa1087850-mRNA-1:exon:338;Parent=Msa1087850-mRNA-1
chr7_3 exon 627336 627507 627336 ID=Msa1087850-mRNA-1:exon:337;Parent=Msa1087850-mRNA-1
chr7_3 five_prime_UTR 627428 627507 627428 ID=Msa1087850-mRNA-1:five_prime_utr;Parent=Msa1087850-mRNA-1
chr7_3 CDS 627336 627427 627336 ID=Msa1087850-mRNA-1:cds;Parent=Msa1087850-mRNA-1
chr7_3 CDS 626245 626319 626245 ID=Msa1087850-mRNA-1:cds;Parent=Msa1087850-mRNA-1
chr7_3 CDS 626169 626218 626169 ID=Msa1087850-mRNA-1:cds;Parent=Msa1087850-mRNA-1
chr7_3 CDS 625521 625731 625521 ID=Msa1087850-mRNA-1:cds;Parent=Msa1087850-mRNA-1
chr7_3 CDS 622624 622834 622624 ID=Msa1087850-mRNA-1:cds;Parent=Msa1087850-mRNA-1
chr7_3 three_prime_UTR 622141 622623 622141 ID=Msa1087850-mRNA-1:three_prime_utr;Parent=Msa1087850-mRNA-1
Gene Sequence

>Msa1087850

ATGTACATAAGTGGTGGTTCTTCTTCCATGGGAAGGTCTTTTAAGGAATCTCTTAAACTGCTTGAAGCTGATATTCATCATGCCAATACCTTGGCATCTGATTTTCCGAGGGAATACGATGGTGCGTGTCTTCAGATGAGAATGTCATACAGTCCAGCAGCGCACTTATTGCAATCTTGCTGGAGCCCTTGGATTATTAAGAATTCTAATTTACAAGCGGTCATATATCCGTCTTTGTTACAACTTGAAAGAGGTGTCACTGATGCTGAGGATAAAAAACAGAAGGTTGTATGCATGGAGCGGTATCGTAGAAGAGAAGACGAGGAGCACAAACAATTCTCAGACATAGACTTTGAAAGAGAAGAAGAGTGTGGAATATGTATGGAGATGAATAGCAAGATTGTGTTGCCTAACTGCAACCATGTCATGAGAGCAAGATCACAGTCATGCCCCTTTTGTCGTGACAGTCTTAAAAGAGTAAACTCGGGCGATCTCTGGATATTCACCGATAGTAGGGACATAGTAGACATGGAAACAGTAACAAGAGAGAACCTTAGAAGGCTTTTCATGTACATAGATAAGTTACCTTTGATCATACCAGAATCCCTTTTTGATCCTTATGACTCTCACTTAAGATAA
Protein sequence

>Msa1087850

MYISGGSSSMGRSFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLLQSCWSPWIIKNSNLQAVIYPSLLQLERGVTDAEDKKQKVVCMERYRRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMRARSQSCPFCRDSLKRVNSGDLWIFTDSRDIVDMETVTRENLRRLFMYIDKLPLIIPESLFDPYDSHLR*