Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140650 | XP_013461604.1 | 98.113 | 159 | 3 | 0 | 5 | 163 | 72 | 230 | 2.29e-97 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140650 | sp|P0CB26|Y1089_ARATH | 56.579 | 152 | 64 | 2 | 14 | 163 | 126 | 277 | 4.46e-21 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140650 | A0A072V0T4 | 98.113 | 159 | 3 | 0 | 5 | 163 | 72 | 230 | 1.09e-97 | 290 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0140650 | 0.809059 | 2.280921e-50 | -8.615850e-47 |
| Msa0009430 | Msa0140650 | 0.819129 | 1.365405e-52 | -8.615850e-47 |
| Msa0023000 | Msa0140650 | 0.805883 | 1.076453e-49 | -8.615850e-47 |
| Msa0025730 | Msa0140650 | 0.807535 | 4.820738e-50 | -8.615850e-47 |
| Msa0027260 | Msa0140650 | 0.835444 | 1.671714e-56 | -8.615850e-47 |
| Msa0028660 | Msa0140650 | 0.800739 | 1.251448e-48 | -8.615850e-47 |
| Msa0037250 | Msa0140650 | 0.827918 | 1.199547e-54 | -8.615850e-47 |
| Msa0048150 | Msa0140650 | 0.827654 | 1.388683e-54 | -8.615850e-47 |
| Msa0052770 | Msa0140650 | 0.804232 | 2.384717e-49 | -8.615850e-47 |
| Msa0055180 | Msa0140650 | 0.816248 | 6.098280e-52 | -8.615850e-47 |
| Msa0056470 | Msa0140650 | 0.875854 | 2.218768e-68 | -8.615850e-47 |
| Msa0064350 | Msa0140650 | 0.814855 | 1.245659e-51 | -8.615850e-47 |
| Msa0072420 | Msa0140650 | 0.811504 | 6.773677e-51 | -8.615850e-47 |
| Msa0084940 | Msa0140650 | 0.819737 | 9.925330e-53 | -8.615850e-47 |
| Msa0090520 | Msa0140650 | 0.803375 | 3.591778e-49 | -8.615850e-47 |
| Msa0094470 | Msa0140650 | 0.816449 | 5.497631e-52 | -8.615850e-47 |
| Msa0100740 | Msa0140650 | 0.817791 | 2.745940e-52 | -8.615850e-47 |
| Msa0115990 | Msa0140650 | 0.819650 | 1.038993e-52 | -8.615850e-47 |
| Msa0118780 | Msa0140650 | 0.805893 | 1.071572e-49 | -8.615850e-47 |
| Msa0123560 | Msa0140650 | 0.828037 | 1.122970e-54 | -8.615850e-47 |
| Msa0128860 | Msa0140650 | 0.800524 | 1.383925e-48 | -8.615850e-47 |
| Msa0137990 | Msa0140650 | 0.802938 | 4.424691e-49 | -8.615850e-47 |
| Msa0140110 | Msa0140650 | 0.834192 | 3.455606e-56 | -8.615850e-47 |
| Msa0140650 | Msa0140820 | 0.850736 | 1.400334e-60 | -8.615850e-47 |
| Msa0140650 | Msa0149190 | 0.822385 | 2.436273e-53 | -8.615850e-47 |
| Msa0140650 | Msa0149200 | 0.809660 | 1.695663e-50 | -8.615850e-47 |
| Msa0140650 | Msa0150300 | 0.808683 | 2.745871e-50 | -8.615850e-47 |
| Msa0140650 | Msa0159180 | 0.807522 | 4.851038e-50 | -8.615850e-47 |
| Msa0140650 | Msa0162130 | 0.815977 | 7.010536e-52 | -8.615850e-47 |
| Msa0140650 | Msa0174730 | 0.800758 | 1.240239e-48 | -8.615850e-47 |
| Msa0140650 | Msa0183900 | 0.816077 | 6.661071e-52 | -8.615850e-47 |
| Msa0140650 | Msa0184780 | 0.826501 | 2.620655e-54 | -8.615850e-47 |
| Msa0140650 | Msa0189520 | 0.816948 | 4.249790e-52 | -8.615850e-47 |
| Msa0140650 | Msa0191050 | 0.820703 | 5.961913e-53 | -8.615850e-47 |
| Msa0140650 | Msa0194480 | 0.831760 | 1.390233e-55 | -8.615850e-47 |
| Msa0140650 | Msa0194950 | -0.838257 | 3.201089e-57 | -8.615850e-47 |
| Msa0140650 | Msa0195720 | 0.805242 | 1.467014e-49 | -8.615850e-47 |
| Msa0140650 | Msa0199690 | 0.833487 | 5.183766e-56 | -8.615850e-47 |
| Msa0140650 | Msa0199880 | 0.847505 | 1.108680e-59 | -8.615850e-47 |
| Msa0140650 | Msa0207670 | 0.806958 | 6.389095e-50 | -8.615850e-47 |
| Msa0140650 | Msa0209350 | 0.846672 | 1.874417e-59 | -8.615850e-47 |
| Msa0140650 | Msa0209500 | 0.800205 | 1.607171e-48 | -8.615850e-47 |
| Msa0140650 | Msa0231980 | 0.816830 | 4.517632e-52 | -8.615850e-47 |
| Msa0140650 | Msa0232050 | 0.821847 | 3.247308e-53 | -8.615850e-47 |
| Msa0140650 | Msa0233350 | 0.812985 | 3.218500e-51 | -8.615850e-47 |
| Msa0140650 | Msa0234050 | 0.809544 | 1.795716e-50 | -8.615850e-47 |
| Msa0140650 | Msa0236270 | 0.827439 | 1.563683e-54 | -8.615850e-47 |
| Msa0140650 | Msa0242410 | 0.831363 | 1.741526e-55 | -8.615850e-47 |
| Msa0140650 | Msa0262310 | 0.807381 | 5.197695e-50 | -8.615850e-47 |
| Msa0140650 | Msa0267970 | 0.826536 | 2.570310e-54 | -8.615850e-47 |
| Msa0140650 | Msa0272300 | 0.823955 | 1.048073e-53 | -8.615850e-47 |
| Msa0140650 | Msa0273900 | 0.827177 | 1.806905e-54 | -8.615850e-47 |
| Msa0140650 | Msa0280430 | 0.819962 | 8.814895e-53 | -8.615850e-47 |
| Msa0140650 | Msa0280610 | 0.844830 | 5.929824e-59 | -8.615850e-47 |
| Msa0140650 | Msa0298700 | 0.805353 | 1.390943e-49 | -8.615850e-47 |
| Msa0140650 | Msa0304590 | 0.812700 | 3.715428e-51 | -8.615850e-47 |
| Msa0140650 | Msa0304960 | 0.803543 | 3.315371e-49 | -8.615850e-47 |
| Msa0140650 | Msa0308270 | 0.800927 | 1.145616e-48 | -8.615850e-47 |
| Msa0140650 | Msa0310030 | 0.819949 | 8.876521e-53 | -8.615850e-47 |
| Msa0140650 | Msa0314720 | 0.836942 | 6.960227e-57 | -8.615850e-47 |
| Msa0140650 | Msa0315440 | -0.852364 | 4.846421e-61 | -8.615850e-47 |
| Msa0140650 | Msa0322890 | 0.807447 | 5.032386e-50 | -8.615850e-47 |
| Msa0140650 | Msa0337650 | 0.811902 | 5.550439e-51 | -8.615850e-47 |
| Msa0140650 | Msa0340380 | 0.802944 | 4.410398e-49 | -8.615850e-47 |
| Msa0140650 | Msa0366890 | 0.864748 | 9.724665e-65 | -8.615850e-47 |
| Msa0140650 | Msa0369450 | 0.827103 | 1.881718e-54 | -8.615850e-47 |
| Msa0140650 | Msa0376300 | 0.849472 | 3.164806e-60 | -8.615850e-47 |
| Msa0140650 | Msa0376310 | 0.843650 | 1.229595e-58 | -8.615850e-47 |
| Msa0140650 | Msa0376450 | -0.800912 | 1.153791e-48 | -8.615850e-47 |
| Msa0140650 | Msa0376690 | 0.826836 | 2.179865e-54 | -8.615850e-47 |
| Msa0140650 | Msa0378490 | 0.938500 | 6.077252e-99 | -8.615850e-47 |
| Msa0140650 | Msa0380300 | 0.818231 | 2.183658e-52 | -8.615850e-47 |
| Msa0140650 | Msa0385580 | 0.808286 | 3.337051e-50 | -8.615850e-47 |
| Msa0140650 | Msa0390030 | 0.826858 | 2.153589e-54 | -8.615850e-47 |
| Msa0140650 | Msa0398670 | 0.808841 | 2.540295e-50 | -8.615850e-47 |
| Msa0140650 | Msa0414800 | 0.855798 | 4.953926e-62 | -8.615850e-47 |
| Msa0140650 | Msa0415430 | 0.834825 | 2.395246e-56 | -8.615850e-47 |
| Msa0140650 | Msa0425220 | 0.814393 | 1.576201e-51 | -8.615850e-47 |
| Msa0140650 | Msa0427150 | 0.856431 | 3.232709e-62 | -8.615850e-47 |
| Msa0140650 | Msa0439200 | 0.800467 | 1.421981e-48 | -8.615850e-47 |
| Msa0140650 | Msa0458060 | 0.845003 | 5.325736e-59 | -8.615850e-47 |
| Msa0140650 | Msa0468330 | 0.801577 | 8.430977e-49 | -8.615850e-47 |
| Msa0140650 | Msa0471440 | 0.842761 | 2.123142e-58 | -8.615850e-47 |
| Msa0140650 | Msa0471590 | 0.849921 | 2.371052e-60 | -8.615850e-47 |
| Msa0140650 | Msa0477080 | 0.837050 | 6.532970e-57 | -8.615850e-47 |
| Msa0140650 | Msa0481480 | 0.825847 | 3.749069e-54 | -8.615850e-47 |
| Msa0140650 | Msa0481810 | 0.809456 | 1.875146e-50 | -8.615850e-47 |
| Msa0140650 | Msa0485340 | 0.815936 | 7.161409e-52 | -8.615850e-47 |
| Msa0140650 | Msa0485850 | 0.834303 | 3.240166e-56 | -8.615850e-47 |
| Msa0140650 | Msa0508590 | 0.803862 | 2.846963e-49 | -8.615850e-47 |
| Msa0140650 | Msa0508630 | 0.808282 | 3.343289e-50 | -8.615850e-47 |
| Msa0140650 | Msa0510350 | 0.811481 | 6.853110e-51 | -8.615850e-47 |
| Msa0140650 | Msa0512340 | 0.835550 | 1.572400e-56 | -8.615850e-47 |
| Msa0140650 | Msa0518390 | 0.804519 | 2.077992e-49 | -8.615850e-47 |
| Msa0140650 | Msa0521050 | 0.837037 | 6.582989e-57 | -8.615850e-47 |
| Msa0140650 | Msa0524500 | 0.816945 | 4.255786e-52 | -8.615850e-47 |
| Msa0140650 | Msa0531530 | 0.830125 | 3.502814e-55 | -8.615850e-47 |
| Msa0140650 | Msa0534900 | 0.824896 | 6.295447e-54 | -8.615850e-47 |
| Msa0140650 | Msa0541360 | 0.815997 | 6.939489e-52 | -8.615850e-47 |
| Msa0140650 | Msa0548240 | 0.848353 | 6.470650e-60 | -8.615850e-47 |
| Msa0140650 | Msa0556060 | 0.827278 | 1.709225e-54 | -8.615850e-47 |
| Msa0140650 | Msa0581070 | 0.803810 | 2.918253e-49 | -8.615850e-47 |
| Msa0140650 | Msa0581110 | 0.816528 | 5.278200e-52 | -8.615850e-47 |
| Msa0140650 | Msa0588260 | 0.851675 | 7.602623e-61 | -8.615850e-47 |
| Msa0140650 | Msa0589190 | 0.801380 | 9.254862e-49 | -8.615850e-47 |
| Msa0140650 | Msa0615490 | 0.810025 | 1.414963e-50 | -8.615850e-47 |
| Msa0140650 | Msa0621640 | 0.805912 | 1.061629e-49 | -8.615850e-47 |
| Msa0140650 | Msa0623790 | 0.802832 | 4.652196e-49 | -8.615850e-47 |
| Msa0140650 | Msa0631350 | 0.807471 | 4.972953e-50 | -8.615850e-47 |
| Msa0140650 | Msa0636070 | 0.804336 | 2.268877e-49 | -8.615850e-47 |
| Msa0140650 | Msa0643560 | 0.800968 | 1.123636e-48 | -8.615850e-47 |
| Msa0140650 | Msa0647500 | 0.839954 | 1.163309e-57 | -8.615850e-47 |
| Msa0140650 | Msa0650050 | -0.803902 | 2.793426e-49 | -8.615850e-47 |
| Msa0140650 | Msa0651050 | 0.801360 | 9.341269e-49 | -8.615850e-47 |
| Msa0140650 | Msa0661300 | 0.873994 | 9.546189e-68 | -8.615850e-47 |
| Msa0140650 | Msa0666270 | 0.865666 | 5.004839e-65 | -8.615850e-47 |
| Msa0140650 | Msa0675410 | 0.819698 | 1.013321e-52 | -8.615850e-47 |
| Msa0140650 | Msa0687630 | 0.807145 | 5.830637e-50 | -8.615850e-47 |
| Msa0140650 | Msa0688960 | 0.831066 | 2.060549e-55 | -8.615850e-47 |
| Msa0140650 | Msa0690150 | 0.820117 | 8.125565e-53 | -8.615850e-47 |
| Msa0140650 | Msa0691900 | 0.804390 | 2.210856e-49 | -8.615850e-47 |
| Msa0140650 | Msa0692830 | 0.807836 | 4.160934e-50 | -8.615850e-47 |
| Msa0140650 | Msa0692840 | 0.825197 | 5.344540e-54 | -8.615850e-47 |
| Msa0140650 | Msa0692940 | 0.840809 | 6.952382e-58 | -8.615850e-47 |
| Msa0140650 | Msa0692950 | 0.802524 | 5.386944e-49 | -8.615850e-47 |
| Msa0140650 | Msa0697940 | 0.823763 | 1.162581e-53 | -8.615850e-47 |
| Msa0140650 | Msa0698540 | 0.833734 | 4.499202e-56 | -8.615850e-47 |
| Msa0140650 | Msa0698780 | 0.803634 | 3.173865e-49 | -8.615850e-47 |
| Msa0140650 | Msa0706960 | 0.818763 | 1.653992e-52 | -8.615850e-47 |
| Msa0140650 | Msa0709400 | 0.818580 | 1.820236e-52 | -8.615850e-47 |
| Msa0140650 | Msa0709500 | 0.801143 | 1.034698e-48 | -8.615850e-47 |
| Msa0140650 | Msa0722020 | 0.827801 | 1.279757e-54 | -8.615850e-47 |
| Msa0140650 | Msa0737600 | 0.807739 | 4.362409e-50 | -8.615850e-47 |
| Msa0140650 | Msa0763020 | 0.818813 | 1.611294e-52 | -8.615850e-47 |
| Msa0140650 | Msa0763070 | 0.823888 | 1.086763e-53 | -8.615850e-47 |
| Msa0140650 | Msa0771720 | 0.800510 | 1.393126e-48 | -8.615850e-47 |
| Msa0140650 | Msa0774540 | 0.816657 | 4.938635e-52 | -8.615850e-47 |
| Msa0140650 | Msa0788850 | 0.820510 | 6.602839e-53 | -8.615850e-47 |
| Msa0140650 | Msa0790990 | 0.806459 | 8.141177e-50 | -8.615850e-47 |
| Msa0140650 | Msa0801110 | 0.850077 | 2.144178e-60 | -8.615850e-47 |
| Msa0140650 | Msa0805500 | 0.801280 | 9.699108e-49 | -8.615850e-47 |
| Msa0140650 | Msa0808080 | 0.801908 | 7.210023e-49 | -8.615850e-47 |
| Msa0140650 | Msa0808270 | 0.803983 | 2.686226e-49 | -8.615850e-47 |
| Msa0140650 | Msa0820650 | 0.801835 | 7.464796e-49 | -8.615850e-47 |
| Msa0140650 | Msa0820990 | 0.814117 | 1.813644e-51 | -8.615850e-47 |
| Msa0140650 | Msa0833310 | 0.840496 | 8.395272e-58 | -8.615850e-47 |
| Msa0140650 | Msa0842830 | 0.815767 | 7.809988e-52 | -8.615850e-47 |
| Msa0140650 | Msa0847080 | 0.812450 | 4.214295e-51 | -8.615850e-47 |
| Msa0140650 | Msa0847770 | 0.833842 | 4.227931e-56 | -8.615850e-47 |
| Msa0140650 | Msa0849510 | 0.801719 | 7.886048e-49 | -8.615850e-47 |
| Msa0140650 | Msa0926460 | 0.807137 | 5.853174e-50 | -8.615850e-47 |
| Msa0140650 | Msa0927260 | 0.817372 | 3.412992e-52 | -8.615850e-47 |
| Msa0140650 | Msa0968590 | 0.830189 | 3.377393e-55 | -8.615850e-47 |
| Msa0140650 | Msa0974810 | 0.807484 | 4.941755e-50 | -8.615850e-47 |
| Msa0140650 | Msa1000690 | 0.801432 | 9.027362e-49 | -8.615850e-47 |
| Msa0140650 | Msa1013040 | 0.800712 | 1.267500e-48 | -8.615850e-47 |
| Msa0140650 | Msa1019260 | 0.811119 | 8.210052e-51 | -8.615850e-47 |
| Msa0140650 | Msa1023180 | 0.812900 | 3.358540e-51 | -8.615850e-47 |
| Msa0140650 | Msa1034150 | 0.801882 | 7.302066e-49 | -8.615850e-47 |
| Msa0140650 | Msa1037420 | 0.823715 | 1.192986e-53 | -8.615850e-47 |
| Msa0140650 | Msa1043050 | 0.814721 | 1.333493e-51 | -8.615850e-47 |
| Msa0140650 | Msa1046020 | 0.826358 | 2.834411e-54 | -8.615850e-47 |
| Msa0140650 | Msa1046060 | 0.819081 | 1.400820e-52 | -8.615850e-47 |
| Msa0140650 | Msa1081360 | -0.820782 | 5.716667e-53 | -8.615850e-47 |
| Msa0140650 | Msa1081930 | 0.808725 | 2.689441e-50 | -8.615850e-47 |
| Msa0140650 | Msa1091100 | 0.820803 | 5.655987e-53 | -8.615850e-47 |
| Msa0140650 | Msa1091530 | 0.803657 | 3.140579e-49 | -8.615850e-47 |
| Msa0140650 | Msa1104140 | 0.810029 | 1.411872e-50 | -8.615850e-47 |
| Msa0140650 | Msa1104210 | 0.816806 | 4.574708e-52 | -8.615850e-47 |
| Msa0140650 | Msa1123810 | 0.817032 | 4.068717e-52 | -8.615850e-47 |
| Msa0140650 | Msa1124960 | 0.809726 | 1.640546e-50 | -8.615850e-47 |
| Msa0140650 | Msa1126510 | 0.824300 | 8.699119e-54 | -8.615850e-47 |
| Msa0140650 | Msa1126770 | 0.819103 | 1.384776e-52 | -8.615850e-47 |
| Msa0140650 | Msa1126830 | 0.817384 | 3.390563e-52 | -8.615850e-47 |
| Msa0140650 | Msa1130980 | 0.811874 | 5.627912e-51 | -8.615850e-47 |
| Msa0140650 | Msa1134090 | 0.815085 | 1.107275e-51 | -8.615850e-47 |
| Msa0140650 | Msa1134110 | 0.809428 | 1.901597e-50 | -8.615850e-47 |
| Msa0140650 | Msa1143840 | 0.815989 | 6.967045e-52 | -8.615850e-47 |
| Msa0140650 | Msa1150710 | 0.817777 | 2.765785e-52 | -8.615850e-47 |
| Msa0140650 | Msa1165940 | 0.847344 | 1.226880e-59 | -8.615850e-47 |
| Msa0140650 | Msa1166330 | 0.803451 | 3.465189e-49 | -8.615850e-47 |
| Msa0140650 | Msa1166860 | 0.831456 | 1.652668e-55 | -8.615850e-47 |
| Msa0140650 | Msa1171360 | 0.800295 | 1.540981e-48 | -8.615850e-47 |
| Msa0140650 | Msa1173140 | 0.803939 | 2.743364e-49 | -8.615850e-47 |
| Msa0140650 | Msa1190930 | 0.802681 | 4.998556e-49 | -8.615850e-47 |
| Msa0140650 | Msa1199990 | 0.816461 | 5.465894e-52 | -8.615850e-47 |
| Msa0140650 | Msa1204250 | 0.826376 | 2.806728e-54 | -8.615850e-47 |
| Msa0140650 | Msa1207270 | 0.801175 | 1.019464e-48 | -8.615850e-47 |
| Msa0140650 | Msa1211890 | 0.810901 | 9.152884e-51 | -8.615850e-47 |
| Msa0140650 | Msa1238390 | 0.813801 | 2.130035e-51 | -8.615850e-47 |
| Msa0140650 | Msa1239910 | 0.817669 | 2.924948e-52 | -8.615850e-47 |
| Msa0140650 | Msa1243740 | -0.817158 | 3.813182e-52 | -8.615850e-47 |
| Msa0140650 | Msa1244600 | 0.835119 | 2.019893e-56 | -8.615850e-47 |
| Msa0140650 | Msa1244610 | 0.813515 | 2.461565e-51 | -8.615850e-47 |
| Msa0140650 | Msa1253020 | 0.822563 | 2.215647e-53 | -8.615850e-47 |
| Msa0140650 | Msa1254730 | 0.831882 | 1.297254e-55 | -8.615850e-47 |
| Msa0140650 | Msa1275360 | 0.800137 | 1.659200e-48 | -8.615850e-47 |
| Msa0140650 | Msa1280340 | 0.806993 | 6.279081e-50 | -8.615850e-47 |
| Msa0140650 | Msa1293510 | 0.818181 | 2.241446e-52 | -8.615850e-47 |
| Msa0140650 | Msa1294820 | 0.814661 | 1.374976e-51 | -8.615850e-47 |
| Msa0140650 | Msa1295110 | 0.801123 | 1.044507e-48 | -8.615850e-47 |
| Msa0140650 | Msa1296830 | 0.831211 | 1.898795e-55 | -8.615850e-47 |
| Msa0140650 | Msa1304820 | 0.825521 | 4.480176e-54 | -8.615850e-47 |
| Msa0140650 | Msa1305660 | 0.830688 | 2.550311e-55 | -8.615850e-47 |
| Msa0140650 | Msa1320390 | 0.824036 | 1.003065e-53 | -8.615850e-47 |
| Msa0140650 | Msa1332590 | 0.802876 | 4.555974e-49 | -8.615850e-47 |
| Msa0140650 | Msa1333110 | 0.826957 | 2.039520e-54 | -8.615850e-47 |
| Msa0140650 | Msa1361100 | 0.804815 | 1.802118e-49 | -8.615850e-47 |
| Msa0140650 | Msa1361520 | 0.943383 | 1.329868e-102 | -8.615850e-47 |
| Msa0140650 | Msa1365700 | -0.801358 | 9.349596e-49 | -8.615850e-47 |
| Msa0140650 | Msa1365800 | 0.800449 | 1.433799e-48 | -8.615850e-47 |
| Msa0140650 | Msa1368120 | 0.839043 | 2.006291e-57 | -8.615850e-47 |
| Msa0140650 | Msa1368530 | 0.807674 | 4.504995e-50 | -8.615850e-47 |
| Msa0140650 | Msa1379760 | 0.802023 | 6.830536e-49 | -8.615850e-47 |
| Msa0140650 | Msa1385770 | 0.882690 | 8.431994e-71 | -8.615850e-47 |
| Msa0140650 | Msa1386780 | 0.827573 | 1.451978e-54 | -8.615850e-47 |
| Msa0140650 | Msa1391410 | 0.822247 | 2.623574e-53 | -8.615850e-47 |
| Msa0140650 | Msa1392200 | 0.807080 | 6.019829e-50 | -8.615850e-47 |
| Msa0140650 | Msa1393740 | 0.813588 | 2.372139e-51 | -8.615850e-47 |
| Msa0140650 | Msa1394290 | 0.806935 | 6.460293e-50 | -8.615850e-47 |
| Msa0140650 | Msa1402420 | -0.829704 | 4.436537e-55 | -8.615850e-47 |
| Msa0140650 | Msa1404010 | 0.848944 | 4.436729e-60 | -8.615850e-47 |
| Msa0140650 | Msa1409240 | 0.880143 | 6.998006e-70 | -8.615850e-47 |
| Msa0140650 | Msa1417150 | 0.804192 | 2.430804e-49 | -8.615850e-47 |
| Msa0140650 | Msa1418340 | 0.810598 | 1.064695e-50 | -8.615850e-47 |
| Msa0140650 | Msa1420990 | 0.811707 | 6.119713e-51 | -8.615850e-47 |
| Msa0140650 | Msa1428880 | 0.801401 | 9.161266e-49 | -8.615850e-47 |
| Msa0140650 | Msa1432420 | 0.842827 | 2.038061e-58 | -8.615850e-47 |
| Msa0140650 | Msa1434140 | 0.862411 | 5.166340e-64 | -8.615850e-47 |
| Msa0140650 | Msa1434420 | -0.825519 | 4.484796e-54 | -8.615850e-47 |
| Msa0140650 | Msa1450280 | 0.809670 | 1.686940e-50 | -8.615850e-47 |
| Msa0140650 | Msa1451550 | 0.836843 | 7.376694e-57 | -8.615850e-47 |
| Msa0140650 | Msa1451560 | 0.843961 | 1.015006e-58 | -8.615850e-47 |
| Msa0140650 | Msa1453080 | 0.800115 | 1.676910e-48 | -8.615850e-47 |
| Msa0140650 | Msa1454480 | 0.806309 | 8.757318e-50 | -8.615850e-47 |
| Msa0140650 | Msa1456050 | 0.805271 | 1.447006e-49 | -8.615850e-47 |
| Msa0140650 | Msa1461280 | 0.828783 | 7.420698e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140650 | MtrunA17_Chr3g0130941 | 97.297 | 148 | 4 | 0 | 5 | 152 | 72 | 219 | 4.47e-91 | 264 |
| Msa0140650 | MtrunA17_Chr2g0277951 | 66.667 | 153 | 49 | 2 | 13 | 163 | 121 | 273 | 3.58e-42 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140650 | AT5G13340.1 | 70.253 | 158 | 43 | 2 | 9 | 163 | 84 | 240 | 1.22e-39 | 134 |
| Msa0140650 | AT1G10890.4 | 56.579 | 152 | 64 | 2 | 14 | 163 | 126 | 277 | 4.54e-22 | 89.7 |
| Msa0140650 | AT1G10890.3 | 53.750 | 160 | 64 | 3 | 14 | 163 | 78 | 237 | 2.86e-21 | 87.0 |
| Msa0140650 | AT1G10890.2 | 53.750 | 160 | 64 | 3 | 14 | 163 | 79 | 238 | 2.95e-21 | 87.0 |
| Msa0140650 | AT1G10890.1 | 53.750 | 160 | 64 | 3 | 14 | 163 | 126 | 285 | 6.26e-21 | 87.0 |
Find 42 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACGGGTAAGAACAAATCT+AGG | 0.320808 | 1_3:-74938640 | Msa0140650:CDS |
| AGATGCTTGAAGAGAATAGA+AGG | 0.347191 | 1_3:-74938814 | Msa0140650:CDS |
| TCAAATATTCATTCAAGGTC+AGG | 0.347673 | 1_3:+74938530 | None:intergenic |
| TACAGTTGTACAGATAAGTT+TGG | 0.351684 | 1_3:+74938567 | None:intergenic |
| CTACAATTTATGATGTCGTC+TGG | 0.373534 | 1_3:-74939838 | None:intergenic |
| AGACAAAGAATTAAAACTAT+TGG | 0.380286 | 1_3:-74939706 | Msa0140650:CDS |
| GTCTCAGAGAAGAGAAGCTC+TGG | 0.388969 | 1_3:-74938780 | Msa0140650:CDS |
| ACAGTTGTACAGATAAGTTT+GGG | 0.401027 | 1_3:+74938568 | None:intergenic |
| TGTTGAGGAAAAGCTTAATT+CGG | 0.416953 | 1_3:-74939640 | Msa0140650:CDS |
| AAAGGGAATTAGAGATGATT+CGG | 0.448260 | 1_3:-74938730 | Msa0140650:CDS |
| ATGCTCTTACTGAAGCTAGA+AGG | 0.450504 | 1_3:-74939524 | Msa0140650:CDS |
| GGCGGCTCGGAGAAAGAAGT+TGG | 0.469142 | 1_3:-74938693 | Msa0140650:CDS |
| CAAGGTCAGGGTTTCTAACA+AGG | 0.477265 | 1_3:+74938543 | None:intergenic |
| GACAGAAAGAAGAGGCGGCT+CGG | 0.492446 | 1_3:-74938706 | Msa0140650:CDS |
| TGAAGAGAATAGAAGGAGAG+TGG | 0.496275 | 1_3:-74938807 | Msa0140650:CDS |
| AAGACGAAGAACATGCTAAT+CGG | 0.498353 | 1_3:-74938670 | Msa0140650:CDS |
| CAAATATTCATTCAAGGTCA+GGG | 0.505489 | 1_3:+74938531 | None:intergenic |
| GAAGGAGGAGGAACGACAAA+GGG | 0.506761 | 1_3:-74938747 | Msa0140650:CDS |
| TCGTAAAGAGAGAGAAGAGC+TGG | 0.523303 | 1_3:-74938840 | Msa0140650:CDS |
| AGCTCTGGAACTGCAGAGGA+AGG | 0.525953 | 1_3:-74938765 | Msa0140650:CDS |
| TGCTAATCGGAACAATTCTA+CGG | 0.526223 | 1_3:-74938657 | Msa0140650:CDS |
| CAAAGAATTAAAACTATTGG+AGG | 0.531925 | 1_3:-74939703 | Msa0140650:CDS |
| GAATATCAAATATTCATTCA+AGG | 0.532054 | 1_3:+74938525 | None:intergenic |
| TACAATTTATGATGTCGTCT+GGG | 0.539257 | 1_3:-74939837 | None:intergenic |
| GGAAGGAGGAGGAACGACAA+AGG | 0.540434 | 1_3:-74938748 | Msa0140650:CDS |
| GCTTAATTCGGAGGAAGTCA+AGG | 0.565124 | 1_3:-74939628 | Msa0140650:CDS |
| TACGGGTAAGAACAAATCTA+GGG | 0.569086 | 1_3:-74938639 | Msa0140650:CDS |
| GGAACTGCAGAGGAAGGAGG+AGG | 0.574057 | 1_3:-74938759 | Msa0140650:CDS |
| GCTAATCGGAACAATTCTAC+GGG | 0.589835 | 1_3:-74938656 | Msa0140650:CDS |
| AAATCTAGGGCTAACTCGTA+CGG | 0.599093 | 1_3:-74938626 | Msa0140650:CDS |
| AAGTCAAGGTGGAAATTGAA+AGG | 0.603231 | 1_3:-74939614 | Msa0140650:CDS |
| TCTGGAACTGCAGAGGAAGG+AGG | 0.605899 | 1_3:-74938762 | Msa0140650:CDS |
| ATAAGCTGTATCTCGACAGT+AGG | 0.606429 | 1_3:+74938503 | None:intergenic |
| ATTGAAAGGCGTGTAGCAGA+AGG | 0.606667 | 1_3:-74939600 | Msa0140650:CDS |
| TGAGGAAAAGCTTAATTCGG+AGG | 0.614529 | 1_3:-74939637 | Msa0140650:CDS |
| GAGAAGCTCTGGAACTGCAG+AGG | 0.616097 | 1_3:-74938769 | Msa0140650:CDS |
| AAGGTCAGGGTTTCTAACAA+GGG | 0.640048 | 1_3:+74938544 | None:intergenic |
| GATTCGGAGACAGAAAGAAG+AGG | 0.654657 | 1_3:-74938714 | Msa0140650:CDS |
| CAGTTGTACAGATAAGTTTG+GGG | 0.657251 | 1_3:+74938569 | None:intergenic |
| TCGGAGACAGAAAGAAGAGG+CGG | 0.658226 | 1_3:-74938711 | Msa0140650:CDS |
| TAATTCGGAGGAAGTCAAGG+TGG | 0.689080 | 1_3:-74939625 | Msa0140650:CDS |
| AGTTGTACAGATAAGTTTGG+GGG | 0.712563 | 1_3:+74938570 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTCTTTATCATTTTGTATT+TGG | - | chr1_3:74938544-74938563 | Msa0140650:three_prime_UTR | 20.0% |
| !! | AGACAAAGAATTAAAACTAT+TGG | - | chr1_3:74938585-74938604 | Msa0140650:three_prime_UTR | 20.0% |
| !! | TTTCAAATGTAATTACAGAA+TGG | + | chr1_3:74938869-74938888 | None:intergenic | 20.0% |
| !! | TCTGTAATTACATTTGAAAA+AGG | - | chr1_3:74938870-74938889 | Msa0140650:intron | 20.0% |
| !! | TTGAAATTGTGTTAAATTTC+CGG | - | chr1_3:74938908-74938927 | Msa0140650:intron | 20.0% |
| !! | GTAGTAATTAGATCATAAAA+AGG | - | chr1_3:74939014-74939033 | Msa0140650:intron | 20.0% |
| !!! | TTAGATCATAAAAAGGTTTT+TGG | - | chr1_3:74939021-74939040 | Msa0140650:intron | 20.0% |
| !! | ACAAATCTTGAATCAAATTT+GGG | + | chr1_3:74939062-74939081 | None:intergenic | 20.0% |
| !! | TACAAATCTTGAATCAAATT+TGG | + | chr1_3:74939063-74939082 | None:intergenic | 20.0% |
| !! | GATAAAGATGTTTAAAGATA+TGG | + | chr1_3:74939107-74939126 | None:intergenic | 20.0% |
| !! | TATCTTTAAACATCTTTATC+TGG | - | chr1_3:74939107-74939126 | Msa0140650:intron | 20.0% |
| !! | ATAGTAATCAAGTCATAAAA+AGG | - | chr1_3:74939182-74939201 | Msa0140650:intron | 20.0% |
| !! | TACAAATCTTGAATCAAATT+TGG | + | chr1_3:74939063-74939082 | None:intergenic | 20.0% |
| !!! | TAATGGATAAAGATAAGATA+TGG | + | chr1_3:74939275-74939294 | None:intergenic | 20.0% |
| !!! | TGAATACTACTTTTAATGTA+TGG | - | chr1_3:74939383-74939402 | Msa0140650:intron | 20.0% |
| !! | GAATATCAAATATTCATTCA+AGG | + | chr1_3:74939769-74939788 | None:intergenic | 20.0% |
| !!! | GTTCTTTATCATTTTGTATT+TGG | - | chr1_3:74938544-74938563 | Msa0140650:three_prime_UTR | 20.0% |
| !! | AGACAAAGAATTAAAACTAT+TGG | - | chr1_3:74938585-74938604 | Msa0140650:three_prime_UTR | 20.0% |
| !! | TTTCAAATGTAATTACAGAA+TGG | + | chr1_3:74938869-74938888 | None:intergenic | 20.0% |
| !! | TCTGTAATTACATTTGAAAA+AGG | - | chr1_3:74938870-74938889 | Msa0140650:intron | 20.0% |
| !! | TTGAAATTGTGTTAAATTTC+CGG | - | chr1_3:74938908-74938927 | Msa0140650:intron | 20.0% |
| !! | GTAGTAATTAGATCATAAAA+AGG | - | chr1_3:74939014-74939033 | Msa0140650:intron | 20.0% |
| !!! | TTAGATCATAAAAAGGTTTT+TGG | - | chr1_3:74939021-74939040 | Msa0140650:intron | 20.0% |
| !! | ACAAATCTTGAATCAAATTT+GGG | + | chr1_3:74939062-74939081 | None:intergenic | 20.0% |
| !! | TACAAATCTTGAATCAAATT+TGG | + | chr1_3:74939063-74939082 | None:intergenic | 20.0% |
| !! | GATAAAGATGTTTAAAGATA+TGG | + | chr1_3:74939107-74939126 | None:intergenic | 20.0% |
| !! | TATCTTTAAACATCTTTATC+TGG | - | chr1_3:74939107-74939126 | Msa0140650:intron | 20.0% |
| !! | ATAGTAATCAAGTCATAAAA+AGG | - | chr1_3:74939182-74939201 | Msa0140650:intron | 20.0% |
| !! | TACAAATCTTGAATCAAATT+TGG | + | chr1_3:74939063-74939082 | None:intergenic | 20.0% |
| !!! | TAATGGATAAAGATAAGATA+TGG | + | chr1_3:74939275-74939294 | None:intergenic | 20.0% |
| !!! | TGAATACTACTTTTAATGTA+TGG | - | chr1_3:74939383-74939402 | Msa0140650:intron | 20.0% |
| !! | GAATATCAAATATTCATTCA+AGG | + | chr1_3:74939769-74939788 | None:intergenic | 20.0% |
| ! | CAAAGAATTAAAACTATTGG+AGG | - | chr1_3:74938588-74938607 | Msa0140650:three_prime_UTR | 25.0% |
| ! | ACAAATAACAAATCGTACAT+TGG | + | chr1_3:74939352-74939371 | None:intergenic | 25.0% |
| ! | CAAAGAATTAAAACTATTGG+AGG | - | chr1_3:74938588-74938607 | Msa0140650:three_prime_UTR | 25.0% |
| ! | ACAAATAACAAATCGTACAT+TGG | + | chr1_3:74939352-74939371 | None:intergenic | 25.0% |
| !! | GCTTTTCCTCAACATTTTTT+CGG | + | chr1_3:74938645-74938664 | None:intergenic | 30.0% |
| TGTTGAGGAAAAGCTTAATT+CGG | - | chr1_3:74938651-74938670 | Msa0140650:CDS | 30.0% | |
| TAATTACTACTTGTACGAAC+GGG | + | chr1_3:74939004-74939023 | None:intergenic | 30.0% | |
| CTAATTACTACTTGTACGAA+CGG | + | chr1_3:74939005-74939024 | None:intergenic | 30.0% | |
| !! | AAGGTTTTTGGATATTCCAT+AGG | - | chr1_3:74939033-74939052 | Msa0140650:intron | 30.0% |
| AATCAAATTTGGGAATCCTA+TGG | + | chr1_3:74939052-74939071 | None:intergenic | 30.0% | |
| !! | GTACATTGGTTAGGTTTTAA+TGG | + | chr1_3:74939338-74939357 | None:intergenic | 30.0% |
| ! | TAACAAATCGTACATTGGTT+AGG | + | chr1_3:74939347-74939366 | None:intergenic | 30.0% |
| AAAGGGAATTAGAGATGATT+CGG | - | chr1_3:74939561-74939580 | Msa0140650:CDS | 30.0% | |
| ACAGTTGTACAGATAAGTTT+GGG | + | chr1_3:74939726-74939745 | None:intergenic | 30.0% | |
| TACAGTTGTACAGATAAGTT+TGG | + | chr1_3:74939727-74939746 | None:intergenic | 30.0% | |
| CAAATATTCATTCAAGGTCA+GGG | + | chr1_3:74939763-74939782 | None:intergenic | 30.0% | |
| TCAAATATTCATTCAAGGTC+AGG | + | chr1_3:74939764-74939783 | None:intergenic | 30.0% | |
| !! | GCTTTTCCTCAACATTTTTT+CGG | + | chr1_3:74938645-74938664 | None:intergenic | 30.0% |
| TGTTGAGGAAAAGCTTAATT+CGG | - | chr1_3:74938651-74938670 | Msa0140650:CDS | 30.0% | |
| TAATTACTACTTGTACGAAC+GGG | + | chr1_3:74939004-74939023 | None:intergenic | 30.0% | |
| CTAATTACTACTTGTACGAA+CGG | + | chr1_3:74939005-74939024 | None:intergenic | 30.0% | |
| !! | AAGGTTTTTGGATATTCCAT+AGG | - | chr1_3:74939033-74939052 | Msa0140650:intron | 30.0% |
| AATCAAATTTGGGAATCCTA+TGG | + | chr1_3:74939052-74939071 | None:intergenic | 30.0% | |
| !! | GTACATTGGTTAGGTTTTAA+TGG | + | chr1_3:74939338-74939357 | None:intergenic | 30.0% |
| ! | TAACAAATCGTACATTGGTT+AGG | + | chr1_3:74939347-74939366 | None:intergenic | 30.0% |
| AAAGGGAATTAGAGATGATT+CGG | - | chr1_3:74939561-74939580 | Msa0140650:CDS | 30.0% | |
| ACAGTTGTACAGATAAGTTT+GGG | + | chr1_3:74939726-74939745 | None:intergenic | 30.0% | |
| TACAGTTGTACAGATAAGTT+TGG | + | chr1_3:74939727-74939746 | None:intergenic | 30.0% | |
| CAAATATTCATTCAAGGTCA+GGG | + | chr1_3:74939763-74939782 | None:intergenic | 30.0% | |
| TCAAATATTCATTCAAGGTC+AGG | + | chr1_3:74939764-74939783 | None:intergenic | 30.0% | |
| AGCTATCCGAAAAAATGTTG+AGG | - | chr1_3:74938636-74938655 | Msa0140650:CDS | 35.0% | |
| AAGTCAAGGTGGAAATTGAA+AGG | - | chr1_3:74938677-74938696 | Msa0140650:CDS | 35.0% | |
| ! | GTTACCCTTTTTCTATGAGA+TGG | - | chr1_3:74938817-74938836 | Msa0140650:CDS | 35.0% |
| ATCGCCATCTCATAGAAAAA+GGG | + | chr1_3:74938824-74938843 | None:intergenic | 35.0% | |
| AATCGCCATCTCATAGAAAA+AGG | + | chr1_3:74938825-74938844 | None:intergenic | 35.0% | |
| TGTGTTAAATTTCCGGCAAT+CGG | - | chr1_3:74938915-74938934 | Msa0140650:intron | 35.0% | |
| ! | CATACAAAATTACCGATTGC+CGG | + | chr1_3:74938930-74938949 | None:intergenic | 35.0% |
| AATTACTACTTGTACGAACG+GGG | + | chr1_3:74939003-74939022 | None:intergenic | 35.0% | |
| CCTGATTATCATAGTGCTAA+TGG | + | chr1_3:74939292-74939311 | None:intergenic | 35.0% | |
| CCATTAGCACTATGATAATC+AGG | - | chr1_3:74939289-74939308 | Msa0140650:intron | 35.0% | |
| !! | CATTGGTTAGGTTTTAATGG+TGG | + | chr1_3:74939335-74939354 | None:intergenic | 35.0% |
| ! | TGTGTTTGTTGAAATTCTGC+AGG | - | chr1_3:74939421-74939440 | Msa0140650:intron | 35.0% |
| AGATGCTTGAAGAGAATAGA+AGG | - | chr1_3:74939477-74939496 | Msa0140650:intron | 35.0% | |
| AAGACGAAGAACATGCTAAT+CGG | - | chr1_3:74939621-74939640 | Msa0140650:CDS | 35.0% | |
| TGCTAATCGGAACAATTCTA+CGG | - | chr1_3:74939634-74939653 | Msa0140650:CDS | 35.0% | |
| TACGGGTAAGAACAAATCTA+GGG | - | chr1_3:74939652-74939671 | Msa0140650:CDS | 35.0% | |
| AGTTGTACAGATAAGTTTGG+GGG | + | chr1_3:74939724-74939743 | None:intergenic | 35.0% | |
| CAGTTGTACAGATAAGTTTG+GGG | + | chr1_3:74939725-74939744 | None:intergenic | 35.0% | |
| AGCTATCCGAAAAAATGTTG+AGG | - | chr1_3:74938636-74938655 | Msa0140650:CDS | 35.0% | |
| AAGTCAAGGTGGAAATTGAA+AGG | - | chr1_3:74938677-74938696 | Msa0140650:CDS | 35.0% | |
| ! | GTTACCCTTTTTCTATGAGA+TGG | - | chr1_3:74938817-74938836 | Msa0140650:CDS | 35.0% |
| ATCGCCATCTCATAGAAAAA+GGG | + | chr1_3:74938824-74938843 | None:intergenic | 35.0% | |
| AATCGCCATCTCATAGAAAA+AGG | + | chr1_3:74938825-74938844 | None:intergenic | 35.0% | |
| TGTGTTAAATTTCCGGCAAT+CGG | - | chr1_3:74938915-74938934 | Msa0140650:intron | 35.0% | |
| ! | CATACAAAATTACCGATTGC+CGG | + | chr1_3:74938930-74938949 | None:intergenic | 35.0% |
| AATTACTACTTGTACGAACG+GGG | + | chr1_3:74939003-74939022 | None:intergenic | 35.0% | |
| CCTGATTATCATAGTGCTAA+TGG | + | chr1_3:74939292-74939311 | None:intergenic | 35.0% | |
| CCATTAGCACTATGATAATC+AGG | - | chr1_3:74939289-74939308 | Msa0140650:intron | 35.0% | |
| !! | CATTGGTTAGGTTTTAATGG+TGG | + | chr1_3:74939335-74939354 | None:intergenic | 35.0% |
| ! | TGTGTTTGTTGAAATTCTGC+AGG | - | chr1_3:74939421-74939440 | Msa0140650:intron | 35.0% |
| AGATGCTTGAAGAGAATAGA+AGG | - | chr1_3:74939477-74939496 | Msa0140650:intron | 35.0% | |
| AAGACGAAGAACATGCTAAT+CGG | - | chr1_3:74939621-74939640 | Msa0140650:CDS | 35.0% | |
| TGCTAATCGGAACAATTCTA+CGG | - | chr1_3:74939634-74939653 | Msa0140650:CDS | 35.0% | |
| TACGGGTAAGAACAAATCTA+GGG | - | chr1_3:74939652-74939671 | Msa0140650:CDS | 35.0% | |
| AGTTGTACAGATAAGTTTGG+GGG | + | chr1_3:74939724-74939743 | None:intergenic | 35.0% | |
| CAGTTGTACAGATAAGTTTG+GGG | + | chr1_3:74939725-74939744 | None:intergenic | 35.0% | |
| TGAGGAAAAGCTTAATTCGG+AGG | - | chr1_3:74938654-74938673 | Msa0140650:CDS | 40.0% | |
| ATGCTCTTACTGAAGCTAGA+AGG | - | chr1_3:74938767-74938786 | Msa0140650:CDS | 40.0% | |
| TTCTATGAGATGGCGATTGA+AGG | - | chr1_3:74938827-74938846 | Msa0140650:CDS | 40.0% | |
| TCTATGAGATGGCGATTGAA+GGG | - | chr1_3:74938828-74938847 | Msa0140650:CDS | 40.0% | |
| CAAAAATCCTGGTTTCTGCA+GGG | + | chr1_3:74939147-74939166 | None:intergenic | 40.0% | |
| ! | AACCAGGATTTTTGCTCTGT+TGG | - | chr1_3:74939153-74939172 | Msa0140650:intron | 40.0% |
| TGAAGAGAATAGAAGGAGAG+TGG | - | chr1_3:74939484-74939503 | Msa0140650:intron | 40.0% | |
| GCTAATCGGAACAATTCTAC+GGG | - | chr1_3:74939635-74939654 | Msa0140650:CDS | 40.0% | |
| CTACGGGTAAGAACAAATCT+AGG | - | chr1_3:74939651-74939670 | Msa0140650:CDS | 40.0% | |
| ! | AAATCTAGGGCTAACTCGTA+CGG | - | chr1_3:74939665-74939684 | Msa0140650:CDS | 40.0% |
| AAGGTCAGGGTTTCTAACAA+GGG | + | chr1_3:74939750-74939769 | None:intergenic | 40.0% | |
| ATAAGCTGTATCTCGACAGT+AGG | + | chr1_3:74939791-74939810 | None:intergenic | 40.0% | |
| TGAGGAAAAGCTTAATTCGG+AGG | - | chr1_3:74938654-74938673 | Msa0140650:CDS | 40.0% | |
| ATGCTCTTACTGAAGCTAGA+AGG | - | chr1_3:74938767-74938786 | Msa0140650:CDS | 40.0% | |
| TTCTATGAGATGGCGATTGA+AGG | - | chr1_3:74938827-74938846 | Msa0140650:CDS | 40.0% | |
| TCTATGAGATGGCGATTGAA+GGG | - | chr1_3:74938828-74938847 | Msa0140650:CDS | 40.0% | |
| CAAAAATCCTGGTTTCTGCA+GGG | + | chr1_3:74939147-74939166 | None:intergenic | 40.0% | |
| ! | AACCAGGATTTTTGCTCTGT+TGG | - | chr1_3:74939153-74939172 | Msa0140650:intron | 40.0% |
| TGAAGAGAATAGAAGGAGAG+TGG | - | chr1_3:74939484-74939503 | Msa0140650:intron | 40.0% | |
| GCTAATCGGAACAATTCTAC+GGG | - | chr1_3:74939635-74939654 | Msa0140650:CDS | 40.0% | |
| CTACGGGTAAGAACAAATCT+AGG | - | chr1_3:74939651-74939670 | Msa0140650:CDS | 40.0% | |
| ! | AAATCTAGGGCTAACTCGTA+CGG | - | chr1_3:74939665-74939684 | Msa0140650:CDS | 40.0% |
| AAGGTCAGGGTTTCTAACAA+GGG | + | chr1_3:74939750-74939769 | None:intergenic | 40.0% | |
| ATAAGCTGTATCTCGACAGT+AGG | + | chr1_3:74939791-74939810 | None:intergenic | 40.0% | |
| GCTTAATTCGGAGGAAGTCA+AGG | - | chr1_3:74938663-74938682 | Msa0140650:CDS | 45.0% | |
| TAATTCGGAGGAAGTCAAGG+TGG | - | chr1_3:74938666-74938685 | Msa0140650:CDS | 45.0% | |
| ! | ATTGAAAGGCGTGTAGCAGA+AGG | - | chr1_3:74938691-74938710 | Msa0140650:CDS | 45.0% |
| CTATGAGATGGCGATTGAAG+GGG | - | chr1_3:74938829-74938848 | Msa0140650:CDS | 45.0% | |
| GCAAAAATCCTGGTTTCTGC+AGG | + | chr1_3:74939148-74939167 | None:intergenic | 45.0% | |
| CACCAACAGAGCAAAAATCC+TGG | + | chr1_3:74939158-74939177 | None:intergenic | 45.0% | |
| TCGTAAAGAGAGAGAAGAGC+TGG | - | chr1_3:74939451-74939470 | Msa0140650:intron | 45.0% | |
| GATTCGGAGACAGAAAGAAG+AGG | - | chr1_3:74939577-74939596 | Msa0140650:CDS | 45.0% | |
| CAAGGTCAGGGTTTCTAACA+AGG | + | chr1_3:74939751-74939770 | None:intergenic | 45.0% | |
| GCTTAATTCGGAGGAAGTCA+AGG | - | chr1_3:74938663-74938682 | Msa0140650:CDS | 45.0% | |
| TAATTCGGAGGAAGTCAAGG+TGG | - | chr1_3:74938666-74938685 | Msa0140650:CDS | 45.0% | |
| ! | ATTGAAAGGCGTGTAGCAGA+AGG | - | chr1_3:74938691-74938710 | Msa0140650:CDS | 45.0% |
| CTATGAGATGGCGATTGAAG+GGG | - | chr1_3:74938829-74938848 | Msa0140650:CDS | 45.0% | |
| GCAAAAATCCTGGTTTCTGC+AGG | + | chr1_3:74939148-74939167 | None:intergenic | 45.0% | |
| CACCAACAGAGCAAAAATCC+TGG | + | chr1_3:74939158-74939177 | None:intergenic | 45.0% | |
| TCGTAAAGAGAGAGAAGAGC+TGG | - | chr1_3:74939451-74939470 | Msa0140650:intron | 45.0% | |
| GATTCGGAGACAGAAAGAAG+AGG | - | chr1_3:74939577-74939596 | Msa0140650:CDS | 45.0% | |
| CAAGGTCAGGGTTTCTAACA+AGG | + | chr1_3:74939751-74939770 | None:intergenic | 45.0% | |
| AGATTCTGGGTTCTGCAAGG+TGG | + | chr1_3:74938977-74938996 | None:intergenic | 50.0% | |
| CAGAGATTCTGGGTTCTGCA+AGG | + | chr1_3:74938980-74938999 | None:intergenic | 50.0% | |
| AAATCCTGGTTTCTGCAGGG+TGG | + | chr1_3:74939144-74939163 | None:intergenic | 50.0% | |
| GTCTCAGAGAAGAGAAGCTC+TGG | - | chr1_3:74939511-74939530 | Msa0140650:intron | 50.0% | |
| GAAGGAGGAGGAACGACAAA+GGG | - | chr1_3:74939544-74939563 | Msa0140650:CDS | 50.0% | |
| TCGGAGACAGAAAGAAGAGG+CGG | - | chr1_3:74939580-74939599 | Msa0140650:CDS | 50.0% | |
| AGATTCTGGGTTCTGCAAGG+TGG | + | chr1_3:74938977-74938996 | None:intergenic | 50.0% | |
| CAGAGATTCTGGGTTCTGCA+AGG | + | chr1_3:74938980-74938999 | None:intergenic | 50.0% | |
| AAATCCTGGTTTCTGCAGGG+TGG | + | chr1_3:74939144-74939163 | None:intergenic | 50.0% | |
| GTCTCAGAGAAGAGAAGCTC+TGG | - | chr1_3:74939511-74939530 | Msa0140650:intron | 50.0% | |
| GAAGGAGGAGGAACGACAAA+GGG | - | chr1_3:74939544-74939563 | Msa0140650:CDS | 50.0% | |
| TCGGAGACAGAAAGAAGAGG+CGG | - | chr1_3:74939580-74939599 | Msa0140650:CDS | 50.0% | |
| ACGAACGGGGCAGAGATTCT+GGG | + | chr1_3:74938990-74939009 | None:intergenic | 55.0% | |
| TACGAACGGGGCAGAGATTC+TGG | + | chr1_3:74938991-74939010 | None:intergenic | 55.0% | |
| !! | GAGAAGCTCTGGAACTGCAG+AGG | - | chr1_3:74939522-74939541 | Msa0140650:CDS | 55.0% |
| !! | AGCTCTGGAACTGCAGAGGA+AGG | - | chr1_3:74939526-74939545 | Msa0140650:CDS | 55.0% |
| ! | TCTGGAACTGCAGAGGAAGG+AGG | - | chr1_3:74939529-74939548 | Msa0140650:CDS | 55.0% |
| GGAAGGAGGAGGAACGACAA+AGG | - | chr1_3:74939543-74939562 | Msa0140650:CDS | 55.0% | |
| GACAGAAAGAAGAGGCGGCT+CGG | - | chr1_3:74939585-74939604 | Msa0140650:CDS | 55.0% | |
| ACGAACGGGGCAGAGATTCT+GGG | + | chr1_3:74938990-74939009 | None:intergenic | 55.0% | |
| TACGAACGGGGCAGAGATTC+TGG | + | chr1_3:74938991-74939010 | None:intergenic | 55.0% | |
| !! | GAGAAGCTCTGGAACTGCAG+AGG | - | chr1_3:74939522-74939541 | Msa0140650:CDS | 55.0% |
| !! | AGCTCTGGAACTGCAGAGGA+AGG | - | chr1_3:74939526-74939545 | Msa0140650:CDS | 55.0% |
| ! | TCTGGAACTGCAGAGGAAGG+AGG | - | chr1_3:74939529-74939548 | Msa0140650:CDS | 55.0% |
| GGAAGGAGGAGGAACGACAA+AGG | - | chr1_3:74939543-74939562 | Msa0140650:CDS | 55.0% | |
| GACAGAAAGAAGAGGCGGCT+CGG | - | chr1_3:74939585-74939604 | Msa0140650:CDS | 55.0% | |
| GGAACTGCAGAGGAAGGAGG+AGG | - | chr1_3:74939532-74939551 | Msa0140650:CDS | 60.0% | |
| ! | GGCGGCTCGGAGAAAGAAGT+TGG | - | chr1_3:74939598-74939617 | Msa0140650:CDS | 60.0% |
| GGAACTGCAGAGGAAGGAGG+AGG | - | chr1_3:74939532-74939551 | Msa0140650:CDS | 60.0% | |
| ! | GGCGGCTCGGAGAAAGAAGT+TGG | - | chr1_3:74939598-74939617 | Msa0140650:CDS | 60.0% |
| TGCGCCACCCTGCAGAAACC+AGG | - | chr1_3:74939137-74939156 | Msa0140650:intron | 65.0% | |
| TGCGCCACCCTGCAGAAACC+AGG | - | chr1_3:74939137-74939156 | Msa0140650:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 74938462 | 74939851 | 74938462 | ID=Msa0140650;Name=Msa0140650 |
| chr1_3 | mRNA | 74938462 | 74939851 | 74938462 | ID=Msa0140650-mRNA-1;Parent=Msa0140650;Name=Msa0140650-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.5|0.66|0.66|1|1|3|157|163 |
| chr1_3 | exon | 74938462 | 74938870 | 74938462 | ID=Msa0140650-mRNA-1:exon:26225;Parent=Msa0140650-mRNA-1 |
| chr1_3 | exon | 74939518 | 74939743 | 74939518 | ID=Msa0140650-mRNA-1:exon:26224;Parent=Msa0140650-mRNA-1 |
| chr1_3 | exon | 74939838 | 74939851 | 74939838 | ID=Msa0140650-mRNA-1:exon:26223;Parent=Msa0140650-mRNA-1 |
| chr1_3 | CDS | 74939838 | 74939851 | 74939838 | ID=Msa0140650-mRNA-1:cds;Parent=Msa0140650-mRNA-1 |
| chr1_3 | CDS | 74939518 | 74939743 | 74939518 | ID=Msa0140650-mRNA-1:cds;Parent=Msa0140650-mRNA-1 |
| chr1_3 | CDS | 74938619 | 74938870 | 74938619 | ID=Msa0140650-mRNA-1:cds;Parent=Msa0140650-mRNA-1 |
| chr1_3 | three_prime_UTR | 74938462 | 74938618 | 74938462 | ID=Msa0140650-mRNA-1:three_prime_utr;Parent=Msa0140650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
