AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0191940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191940 MtrunA17_Chr2g0281861 78.088 251 16 3 1 212 1 251 1.69e-135 380
Msa0191940 MtrunA17_Chr4g0047521 64.940 251 46 5 1 212 1 248 3.12e-104 300
Msa0191940 MtrunA17_Chr3g0104651 47.325 243 88 4 10 212 13 255 1.76e-71 218
Msa0191940 MtrunA17_Chr4g0006201 50.431 232 76 3 10 202 6 237 7.91e-71 216
Msa0191940 MtrunA17_Chr7g0242261 48.718 234 80 4 5 198 16 249 2.88e-65 202
Msa0191940 MtrunA17_Chr8g0376861 36.400 250 101 6 14 211 10 253 7.23e-42 142
Msa0191940 MtrunA17_Chr3g0123161 35.827 254 99 7 14 211 13 258 9.66e-38 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191940 AT3G47160.1 51.037 241 77 4 13 212 5 245 1.66e-79 238
Msa0191940 AT3G47160.2 48.617 253 77 5 13 212 5 257 7.09e-76 229
Msa0191940 AT5G01520.1 48.523 237 83 4 10 207 1 237 1.28e-73 223
Msa0191940 AT5G58787.1 51.452 241 73 5 13 212 5 242 1.04e-70 216
Msa0191940 AT5G58787.2 50.885 226 82 7 13 212 5 227 3.01e-63 196
Msa0191940 AT3G47160.3 47.596 208 68 4 46 212 1 208 6.10e-61 189
Msa0191940 AT5G58787.3 47.619 210 81 7 29 212 2 208 1.81e-51 165
Msa0191940 AT5G01520.2 44.848 165 60 3 10 143 1 165 1.60e-43 144
Msa0191940 AT1G24440.1 38.367 245 102 7 13 211 9 250 1.21e-40 139
Msa0191940 AT1G13195.1 37.238 239 104 5 14 207 16 253 2.72e-40 138
Msa0191940 AT1G13195.2 43.624 149 73 3 69 207 68 215 1.05e-32 118
Msa0191940 AT1G24440.2 42.208 154 73 3 71 211 68 218 1.13e-32 117

Find 67 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCCTCTTATGATATTA+AGG 0.242881 2_1:-7670411 Msa0191940:three_prime_UTR
CATATAATCTACCTTTATAT+TGG 0.260470 2_1:+7670284 None:intergenic
AAAGTCTGCATTCAACTATT+TGG 0.271531 2_1:+7670254 None:intergenic
GAGAGTCATAAGGATCAAAA+AGG 0.298294 2_1:+7670692 None:intergenic
AACTCAAGGCTGGAATCTTC+TGG 0.300509 2_1:+7670536 None:intergenic
TATAAACTTTGAATGTAATC+TGG 0.341065 2_1:-7670602 Msa0191940:three_prime_UTR
TGCAATCTTGCTGGAGCCCT+TGG 0.344245 2_1:-7674250 Msa0191940:CDS
TTGTTGTGGTTACTATTTCA+AGG 0.358630 2_1:-7670233 Msa0191940:three_prime_UTR
AAAAGAAATTTACAAGGTAT+TGG 0.363016 2_1:+7675378 None:intergenic
TTTAAGACTGTCACGACAAA+AGG 0.370109 2_1:+7670846 None:intergenic
TGTACATGAAAAGCCTTCTA+AGG 0.378666 2_1:+7670746 None:intergenic
AGAAGAGTGTGGAATATGTA+TGG 0.390272 2_1:-7673620 Msa0191940:CDS
GAGTAAACTCGGGCGATCTC+TGG 0.395134 2_1:-7670822 Msa0191940:CDS
AAAAGAAACAAGTGCGCTGC+TGG 0.395977 2_1:+7674292 None:intergenic
TGGACAGATTGCAATCTTGC+TGG 0.408751 2_1:-7674259 Msa0191940:intron
ACTATGAAACTTGTTGTTGT+TGG 0.410368 2_1:-7675525 Msa0191940:five_prime_UTR
TAGACTATGAACCAATATAA+AGG 0.423597 2_1:-7670295 Msa0191940:three_prime_UTR
TCTGGATATTCACCGATAGT+AGG 0.429327 2_1:-7670804 Msa0191940:CDS
TAACAAGAGAGAACCTTAGA+AGG 0.432085 2_1:-7670759 Msa0191940:CDS
AAGTGGTGGTTCTTCTTCCA+TGG 0.437052 2_1:-7675452 Msa0191940:CDS
CACAGAAATGTGTTCTTTGA+TGG 0.446529 2_1:-7670646 Msa0191940:three_prime_UTR
ATTCACCTTAATATCATAAG+AGG 0.459611 2_1:+7670406 None:intergenic
TTGTTGTAGTTATTGTTCCA+AGG 0.471942 2_1:-7670197 None:intergenic
GTGTTCTTTGATGGGTGGTT+CGG 0.474646 2_1:-7670637 Msa0191940:three_prime_UTR
ATCTTTGATCATGAATGCAT+TGG 0.478399 2_1:-7670351 Msa0191940:three_prime_UTR
AGTTGGTCATGAAGTTGAAA+TGG 0.483667 2_1:-7670506 Msa0191940:three_prime_UTR
TGGTTCATAGTCTAAGTTGT+TGG 0.484833 2_1:+7670304 None:intergenic
TTAGAATTCTTAATAATCCA+AGG 0.493296 2_1:+7674233 None:intergenic
CAGTCTTAAAAGAGTAAACT+CGG 0.499948 2_1:-7670833 Msa0191940:CDS
TTAAGACTGTCACGACAAAA+GGG 0.503150 2_1:+7670847 None:intergenic
TGTTGTGGTTACTATTTCAA+GGG 0.504413 2_1:-7670232 Msa0191940:three_prime_UTR
TGTTGTAGTTATTGTTCCAA+GGG 0.504529 2_1:-7670196 None:intergenic
GTGGTTCTTCTTCCATGGGA+AGG 0.507770 2_1:-7675447 Msa0191940:CDS
ATTAAGAATTCTAATTTACA+AGG 0.511384 2_1:-7674224 Msa0191940:intron
TATCTTAAGTGAGAGTCATA+AGG 0.513554 2_1:+7670682 None:intergenic
GCCTTGAGTTTGCGATGAGT+TGG 0.514298 2_1:-7670523 Msa0191940:three_prime_UTR
ACTCATCGCAAACTCAAGGC+TGG 0.525194 2_1:+7670526 None:intergenic
TGAGGAAACATGTACATAAG+TGG 0.527124 2_1:-7675469 Msa0191940:exon
CTGGATATTCACCGATAGTA+GGG 0.527934 2_1:-7670803 Msa0191940:CDS
TCTTTGTTACAACTTGAAAG+AGG 0.536875 2_1:-7673751 Msa0191940:CDS
AAAACAGAAGGTTGTATGCA+TGG 0.538430 2_1:-7673707 Msa0191940:CDS
TTTGAAAGAGAAGAAGAGTG+TGG 0.544267 2_1:-7673631 Msa0191940:CDS
TTGATCATGAATGCATTGGA+TGG 0.551447 2_1:-7670347 Msa0191940:three_prime_UTR
GTCTACTATGTCCCTACTAT+CGG 0.552253 2_1:+7670792 None:intergenic
CACATGACATGGTTGCAGTT+AGG 0.552857 2_1:+7673574 None:intergenic
AGTGGTGGTTCTTCTTCCAT+GGG 0.553651 2_1:-7675451 Msa0191940:CDS
TCTTTGATGGGTGGTTCGGA+TGG 0.557204 2_1:-7670633 Msa0191940:three_prime_UTR
AGGGATTCTGGTATGATCAA+AGG 0.560502 2_1:+7670712 None:intergenic
AGCATTTCAGGCACATGACA+TGG 0.568729 2_1:+7673563 None:intergenic
TTCCTTAAAAGACCTTCCCA+TGG 0.575494 2_1:+7675435 None:intergenic
ACCAACTCATCGCAAACTCA+AGG 0.575881 2_1:+7670522 None:intergenic
CTGGAATCTTCTGGAAGACG+TGG 0.580626 2_1:+7670545 None:intergenic
AGATTGAATTACTTATCAAG+AGG 0.589731 2_1:-7670444 Msa0191940:three_prime_UTR
TAGAATTCTTAATAATCCAA+GGG 0.590750 2_1:+7674234 None:intergenic
CTTTCAAGTTGTAACAAAGA+CGG 0.593343 2_1:+7673754 None:intergenic
CACGCACCATCGTATTCCCT+CGG 0.609698 2_1:+7674340 None:intergenic
ACAGAAATGTGTTCTTTGAT+GGG 0.615943 2_1:-7670645 Msa0191940:three_prime_UTR
TAGTAGGGACATAGTAGACA+TGG 0.618868 2_1:-7670788 Msa0191940:CDS
TAAGTAATTCAATCTGTACA+AGG 0.625817 2_1:+7670452 None:intergenic
GAAATGTGTTCTTTGATGGG+TGG 0.628752 2_1:-7670642 Msa0191940:three_prime_UTR
TAAGACTGTCACGACAAAAG+GGG 0.632510 2_1:+7670848 None:intergenic
GTTGAATGCAGACTTTGTTG+TGG 0.647394 2_1:-7670247 Msa0191940:three_prime_UTR
GTATCGTAGAAGAGAAGACG+AGG 0.670479 2_1:-7673680 Msa0191940:CDS
AGAAGGTTGTATGCATGGAG+CGG 0.676580 2_1:-7673702 Msa0191940:CDS
GGAAACATGTACATAAGTGG+TGG 0.683193 2_1:-7675466 Msa0191940:exon
AGTCTTAAAAGAGTAAACTC+GGG 0.691812 2_1:-7670832 Msa0191940:CDS
AAGAGGTGTCACTGATGCTG+AGG 0.697146 2_1:-7673734 Msa0191940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTTTATTATTTT+TGG - chr2_1:7670473-7670492 Msa0191940:three_prime_UTR 0.0%
!! GTTAAAAAAAATTAAGATAA+AGG + chr2_1:7671892-7671911 None:intergenic 10.0%
!! TCAATATTATTTATTACATA+TGG - chr2_1:7672760-7672779 Msa0191940:intron 10.0%
!!! AACTTAAAATATTCTTTTTA+AGG - chr2_1:7674518-7674537 Msa0191940:intron 10.0%
!!! ATCATGAGTTATTTTTATTT+TGG - chr2_1:7670502-7670521 Msa0191940:three_prime_UTR 15.0%
!!! TTTATTTTGGAATTATTTTC+TGG - chr2_1:7670515-7670534 Msa0191940:three_prime_UTR 15.0%
!!! TTATTTTGGAATTATTTTCT+GGG - chr2_1:7670516-7670535 Msa0191940:three_prime_UTR 15.0%
!!! ATTTTTCTTTTCCATAAATA+TGG - chr2_1:7670583-7670602 Msa0191940:three_prime_UTR 15.0%
!! TTATAACTTGATCATATAAT+TGG - chr2_1:7671354-7671373 Msa0191940:intron 15.0%
!! TATAACTTGATCATATAATT+GGG - chr2_1:7671355-7671374 Msa0191940:intron 15.0%
!! ATTAAGAATTCTAATTTACA+AGG - chr2_1:7671514-7671533 Msa0191940:intron 15.0%
!! TTATAAAAATAACTTAGACA+TGG - chr2_1:7671759-7671778 Msa0191940:intron 15.0%
!! TTCAGAACTAAATTAATTTA+AGG + chr2_1:7672383-7672402 None:intergenic 15.0%
!! GTAATAAATAATATTGAGAT+TGG + chr2_1:7672757-7672776 None:intergenic 15.0%
!!! AAAATACGAATCTTTAAAAT+TGG + chr2_1:7672837-7672856 None:intergenic 15.0%
!! GAAATCTAATAAACTTAATT+AGG + chr2_1:7673795-7673814 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTGATGCA+TGG + chr2_1:7673962-7673981 None:intergenic 15.0%
!! AAAAAAATACATATTATCTG+TGG - chr2_1:7673974-7673993 Msa0191940:intron 15.0%
!! AAAAAATACATATTATCTGT+GGG - chr2_1:7673975-7673994 Msa0191940:intron 15.0%
!!! ACATTTTTTTTTTTTTTTGC+AGG - chr2_1:7674847-7674866 Msa0191940:intron 15.0%
!!! AAAAGAAAAACAGTATTTTG+AGG - chr2_1:7670251-7670270 Msa0191940:three_prime_UTR 20.0%
!! AAAAGAAATTTACAAGGTAT+TGG + chr2_1:7670363-7670382 None:intergenic 20.0%
!!! TTTTTTAGTTGTTTTCTTGA+AGG - chr2_1:7670430-7670449 Msa0191940:three_prime_UTR 20.0%
!!! TTTTTAGTTGTTTTCTTGAA+GGG - chr2_1:7670431-7670450 Msa0191940:three_prime_UTR 20.0%
!!! TATTTTGGAATTATTTTCTG+GGG - chr2_1:7670517-7670536 Msa0191940:three_prime_UTR 20.0%
!! GAACCAAAAAAAAAAAATCA+GGG + chr2_1:7670555-7670574 None:intergenic 20.0%
!! TGAACCAAAAAAAAAAAATC+AGG + chr2_1:7670556-7670575 None:intergenic 20.0%
!! TAGAATTCTTAATAATCCAA+GGG + chr2_1:7671507-7671526 None:intergenic 20.0%
!! TTAGAATTCTTAATAATCCA+AGG + chr2_1:7671508-7671527 None:intergenic 20.0%
!! TAGCTTATATGAAAAAAGTT+TGG - chr2_1:7671719-7671738 Msa0191940:intron 20.0%
!! CCATATAAAAAGAAATCATA+CGG + chr2_1:7672344-7672363 None:intergenic 20.0%
!! AGATAAAGAAGAATTTAACA+TGG + chr2_1:7672885-7672904 None:intergenic 20.0%
!! ACAATTCAAAACTAATGATT+TGG + chr2_1:7672937-7672956 None:intergenic 20.0%
!! TATAATACCATTATGAAAGA+AGG - chr2_1:7673140-7673159 Msa0191940:intron 20.0%
!!! GATATGAAATAGCTTTATAA+AGG - chr2_1:7673690-7673709 Msa0191940:CDS 20.0%
!! ATTAATTACTAATGAGAATC+AGG - chr2_1:7673841-7673860 Msa0191940:intron 20.0%
!! AAAAATACATATTATCTGTG+GGG - chr2_1:7673976-7673995 Msa0191940:intron 20.0%
!!! TTGGTATTTGTTTTATTGAT+CGG - chr2_1:7674485-7674504 Msa0191940:intron 20.0%
!! TATAAACTTTGAATGTAATC+TGG - chr2_1:7675136-7675155 Msa0191940:intron 20.0%
!! CATATAATCTACCTTTATAT+TGG + chr2_1:7675457-7675476 None:intergenic 20.0%
! GAAGGAAAAAGAAATTTACA+AGG + chr2_1:7670369-7670388 None:intergenic 25.0%
! GAGAATTGAAAGAAAAAAGA+AGG + chr2_1:7670387-7670406 None:intergenic 25.0%
!!! AAGCCCTGATTTTTTTTTTT+TGG - chr2_1:7670549-7670568 Msa0191940:three_prime_UTR 25.0%
!! TTTCTTTTCCATAAATATGG+TGG - chr2_1:7670586-7670605 Msa0191940:three_prime_UTR 25.0%
! TAAATTCACCACCATATTTA+TGG + chr2_1:7670597-7670616 None:intergenic 25.0%
! TTTATTTCACTGCAAATTCA+TGG - chr2_1:7670613-7670632 Msa0191940:three_prime_UTR 25.0%
! CAGTTATGAATAAATTCTTG+TGG - chr2_1:7670712-7670731 Msa0191940:CDS 25.0%
!!! ATTCTTGTGGAATTTTTCAA+TGG - chr2_1:7670725-7670744 Msa0191940:CDS 25.0%
!!! TTTGTTTTGTTTTGTGTGAA+TGG - chr2_1:7670975-7670994 Msa0191940:intron 25.0%
! ATAGATCAGGAAACAATAAT+TGG + chr2_1:7671104-7671123 None:intergenic 25.0%
! AATTATGTTAAGACTTTCGA+CGG - chr2_1:7671281-7671300 Msa0191940:intron 25.0%
! GAATTCTAATTTACAAGGTT+AGG - chr2_1:7671519-7671538 Msa0191940:intron 25.0%
!! CATTATGAACTGAGAAATTT+TGG - chr2_1:7671562-7671581 Msa0191940:intron 25.0%
! ATGAAAGAAAAGCAAGTATT+AGG - chr2_1:7671847-7671866 Msa0191940:intron 25.0%
! TGAAAGAAAAGCAAGTATTA+GGG - chr2_1:7671848-7671867 Msa0191940:intron 25.0%
!!! GTTTTAAGAAGTATGAAGTT+TGG - chr2_1:7672265-7672284 Msa0191940:intron 25.0%
!! CCGTATGATTTCTTTTTATA+TGG - chr2_1:7672341-7672360 Msa0191940:intron 25.0%
! TCACATACATGATTCTATAT+AGG - chr2_1:7672403-7672422 Msa0191940:intron 25.0%
!! TCGTAAGTCTTGTATTAATT+CGG - chr2_1:7672457-7672476 Msa0191940:intron 25.0%
!! TTGTATTAATTCGGTTTGTT+TGG - chr2_1:7672466-7672485 Msa0191940:intron 25.0%
! ACTTAAAGATGCTCAAAAAA+TGG - chr2_1:7672645-7672664 Msa0191940:intron 25.0%
! CTTAAAGATGCTCAAAAAAT+GGG - chr2_1:7672646-7672665 Msa0191940:intron 25.0%
! ACAAGTATCAATATGAGATT+CGG + chr2_1:7672687-7672706 None:intergenic 25.0%
!!! GAATCTTTAAAATTGGAGTT+GGG + chr2_1:7672830-7672849 None:intergenic 25.0%
!!! ATCATTAGTTTTGAATTGTG+TGG - chr2_1:7672938-7672957 Msa0191940:intron 25.0%
! TAAGTATATATGTCATGCAT+AGG + chr2_1:7673120-7673139 None:intergenic 25.0%
! TCAAATCATGGTTTGAATTT+CGG + chr2_1:7673536-7673555 None:intergenic 25.0%
!!! TTTTAAAATGGCTCAAATCA+TGG + chr2_1:7673548-7673567 None:intergenic 25.0%
! AAAGGTTATTAAAATCGAGT+TGG + chr2_1:7673635-7673654 None:intergenic 25.0%
!!! AACTCGATTTTAATAACCTT+TGG - chr2_1:7673634-7673653 Msa0191940:CDS 25.0%
! TGAGATTACAATGATTTGAA+AGG - chr2_1:7673725-7673744 Msa0191940:CDS 25.0%
!!! ATTTTCTTCTGGAACTATTA+CGG - chr2_1:7673760-7673779 Msa0191940:CDS 25.0%
! TATATACATATTGTCTGAGT+GGG - chr2_1:7673923-7673942 Msa0191940:intron 25.0%
!!! TTTTTTTTTGATGCATGGTA+GGG + chr2_1:7673957-7673976 None:intergenic 25.0%
!!! TTTTTTTTTTGATGCATGGT+AGG + chr2_1:7673958-7673977 None:intergenic 25.0%
!! GAGTTATTTATAGCCTTTTT+GGG - chr2_1:7674077-7674096 Msa0191940:intron 25.0%
! TGAATGATAAGTATTCTATG+TGG - chr2_1:7674414-7674433 Msa0191940:intron 25.0%
! TTAGGCTTTGCATATTATAT+TGG - chr2_1:7674466-7674485 Msa0191940:intron 25.0%
!!! TTTTAATTATAGTGATGTCC+TGG - chr2_1:7674543-7674562 Msa0191940:intron 25.0%
! CAATGTTCATATATCTTATG+TGG - chr2_1:7674575-7674594 Msa0191940:intron 25.0%
! AAAACAAAGACATTTGAAAG+AGG + chr2_1:7674612-7674631 None:intergenic 25.0%
! TAAGTAATTCAATCTGTACA+AGG + chr2_1:7675289-7675308 None:intergenic 25.0%
! AGATTGAATTACTTATCAAG+AGG - chr2_1:7675294-7675313 Msa0191940:intron 25.0%
! ATTCACCTTAATATCATAAG+AGG + chr2_1:7675335-7675354 None:intergenic 25.0%
!!! ATCAAAGATTTGTTTTAGGA+GGG + chr2_1:7675376-7675395 None:intergenic 25.0%
!!! CATGATCAAAGATTTGTTTT+AGG + chr2_1:7675380-7675399 None:intergenic 25.0%
! TAGACTATGAACCAATATAA+AGG - chr2_1:7675443-7675462 Msa0191940:CDS 25.0%
!! ACTATGAAACTTGTTGTTGT+TGG - chr2_1:7670213-7670232 Msa0191940:three_prime_UTR 30.0%
AGTCAAAACTTAGACAACTT+TGG - chr2_1:7670860-7670879 Msa0191940:CDS 30.0%
!!! ACTCAGATGGAGAATTTTTT+TGG - chr2_1:7670904-7670923 Msa0191940:intron 30.0%
!!! ATTTTGTTTTCTCCACCTTA+TGG - chr2_1:7671003-7671022 Msa0191940:intron 30.0%
TGCAATGCATATTATAGATC+AGG + chr2_1:7671117-7671136 None:intergenic 30.0%
!!! TTTTTTCGCTCAATGTTTCA+AGG - chr2_1:7671160-7671179 Msa0191940:intron 30.0%
ATTATGTTAAGACTTTCGAC+GGG - chr2_1:7671282-7671301 Msa0191940:intron 30.0%
!!! TGTTTCTTTTTCTGGTTCAA+TGG - chr2_1:7671459-7671478 Msa0191940:intron 30.0%
! ATTTACAAGGTTAGGCATTT+TGG - chr2_1:7671527-7671546 Msa0191940:intron 30.0%
ACTTATTTGAGCTTACTTAC+TGG - chr2_1:7671604-7671623 Msa0191940:intron 30.0%
! TTTTCTTTCATGTGTAGACA+TGG + chr2_1:7671838-7671857 None:intergenic 30.0%
! TGAAATTCTGTATTGATCAG+CGG - chr2_1:7671953-7671972 Msa0191940:intron 30.0%
!! CTTTCAAGTTGTAACAAAGA+CGG + chr2_1:7671987-7672006 None:intergenic 30.0%
TCTTTGTTACAACTTGAAAG+AGG - chr2_1:7671987-7672006 Msa0191940:intron 30.0%
!!! CATTCCTTATTTTACGATCA+TGG - chr2_1:7672235-7672254 Msa0191940:intron 30.0%
CTTATGCAAAATCTGAATGA+TGG + chr2_1:7672525-7672544 None:intergenic 30.0%
TCATATATATGGTAAAGCAC+AGG + chr2_1:7672565-7672584 None:intergenic 30.0%
TAAGTCATAGCTTAGAAACT+AGG + chr2_1:7672630-7672649 None:intergenic 30.0%
!! CGAATCTTTAAAATTGGAGT+TGG + chr2_1:7672831-7672850 None:intergenic 30.0%
TAAATGATGTGATCTGATGT+AGG - chr2_1:7672856-7672875 Msa0191940:intron 30.0%
AAATGATGTGATCTGATGTA+GGG - chr2_1:7672857-7672876 Msa0191940:intron 30.0%
CTTGAGATTCTTGATAAACT+TGG - chr2_1:7673045-7673064 Msa0191940:intron 30.0%
CATTATGAAAGAAGGAAACA+GGG - chr2_1:7673148-7673167 Msa0191940:intron 30.0%
AAAGAGGTTCTTCTTTACTT+AGG - chr2_1:7673666-7673685 Msa0191940:CDS 30.0%
!! TGAAATAGCTTTATAAAGGC+CGG - chr2_1:7673694-7673713 Msa0191940:CDS 30.0%
! AGAATCAGGCACAATATTTT+AGG - chr2_1:7673855-7673874 Msa0191940:intron 30.0%
ACAGAATCTAAATACAGTGT+TGG + chr2_1:7673886-7673905 None:intergenic 30.0%
CTATATACATATTGTCTGAG+TGG - chr2_1:7673922-7673941 Msa0191940:intron 30.0%
ATATACATATTGTCTGAGTG+GGG - chr2_1:7673924-7673943 Msa0191940:intron 30.0%
!!! TTTTTTTTGATGCATGGTAG+GGG + chr2_1:7673956-7673975 None:intergenic 30.0%
TGAGTACAATACTGAAACTA+GGG - chr2_1:7674012-7674031 Msa0191940:intron 30.0%
! GGAGTTATTTATAGCCTTTT+TGG - chr2_1:7674076-7674095 Msa0191940:intron 30.0%
TTGTAGGATAATGCTCTAAT+TGG - chr2_1:7674369-7674388 Msa0191940:intron 30.0%
CATACAGCTTTCAATTAAAC+AGG + chr2_1:7674820-7674839 None:intergenic 30.0%
CAGTCTTAAAAGAGTAAACT+CGG - chr2_1:7674905-7674924 Msa0191940:intron 30.0%
AGTCTTAAAAGAGTAAACTC+GGG - chr2_1:7674906-7674925 Msa0191940:intron 30.0%
AGAGTCATAAGGATCAAAAA+GGG + chr2_1:7675048-7675067 None:intergenic 30.0%
TATCTTAAGTGAGAGTCATA+AGG + chr2_1:7675059-7675078 None:intergenic 30.0%
ACAGAAATGTGTTCTTTGAT+GGG - chr2_1:7675093-7675112 Msa0191940:intron 30.0%
ATGTGCCTCTTATGATATTA+AGG - chr2_1:7675327-7675346 Msa0191940:intron 30.0%
!!! GATCAAAGATTTGTTTTAGG+AGG + chr2_1:7675377-7675396 None:intergenic 30.0%
ATCTTTGATCATGAATGCAT+TGG - chr2_1:7675387-7675406 Msa0191940:intron 30.0%
AAAGTCTGCATTCAACTATT+TGG + chr2_1:7675487-7675506 None:intergenic 30.0%
TTGTTGTGGTTACTATTTCA+AGG - chr2_1:7675505-7675524 Msa0191940:five_prime_UTR 30.0%
TGTTGTGGTTACTATTTCAA+GGG - chr2_1:7675506-7675525 Msa0191940:five_prime_UTR 30.0%
TGAGGAAACATGTACATAAG+TGG - chr2_1:7670269-7670288 Msa0191940:three_prime_UTR 35.0%
! TCACTGCAAATTCATGGTTT+TGG - chr2_1:7670619-7670638 Msa0191940:three_prime_UTR 35.0%
ACTCATCAAGAAAAAGTTGC+TGG + chr2_1:7671327-7671346 None:intergenic 35.0%
ATCATATAATTGGGCGTGTA+GGG - chr2_1:7671364-7671383 Msa0191940:intron 35.0%
!!! AGGTTAGGCATTTTGGTTTT+TGG - chr2_1:7671534-7671553 Msa0191940:intron 35.0%
! CTAAATTTTCCTCATGCTGT+AGG - chr2_1:7671791-7671810 Msa0191940:intron 35.0%
GCAAGTATTAGGGAATTCTA+TGG - chr2_1:7671858-7671877 Msa0191940:intron 35.0%
! AGTTTGCATTTTACTGTGTG+TGG - chr2_1:7671917-7671936 Msa0191940:intron 35.0%
TGCTGAGGATAAAAAACAGA+AGG - chr2_1:7672019-7672038 Msa0191940:intron 35.0%
AAAACAGAAGGTTGTATGCA+TGG - chr2_1:7672031-7672050 Msa0191940:intron 35.0%
TTTGAAAGAGAAGAAGAGTG+TGG - chr2_1:7672107-7672126 Msa0191940:intron 35.0%
! AGAAGAGTGTGGAATATGTA+TGG - chr2_1:7672118-7672137 Msa0191940:intron 35.0%
AATAAGGAATGTGTGTGTGA+GGG + chr2_1:7672226-7672245 None:intergenic 35.0%
AAATAAGGAATGTGTGTGTG+AGG + chr2_1:7672227-7672246 None:intergenic 35.0%
CAAGCCATGATCGTAAAATA+AGG + chr2_1:7672242-7672261 None:intergenic 35.0%
!! ATTTTACGATCATGGCTTGT+TGG - chr2_1:7672243-7672262 Msa0191940:intron 35.0%
CCTGTTAGGCATCATATATA+TGG + chr2_1:7672576-7672595 None:intergenic 35.0%
CCATATATATGATGCCTAAC+AGG - chr2_1:7672573-7672592 Msa0191940:intron 35.0%
ACAACATAACCCTCTTCTTA+CGG + chr2_1:7672601-7672620 None:intergenic 35.0%
CAGTATTACACACACATTCA+TGG - chr2_1:7672722-7672741 Msa0191940:intron 35.0%
ATTACATATGGACTTGAGAG+AGG - chr2_1:7672772-7672791 Msa0191940:intron 35.0%
TTACATATGGACTTGAGAGA+GGG - chr2_1:7672773-7672792 Msa0191940:intron 35.0%
TAAAATTGGAGTTGGGTAAG+TGG + chr2_1:7672823-7672842 None:intergenic 35.0%
CCTGTTTCCTTCTTTCATAA+TGG + chr2_1:7673150-7673169 None:intergenic 35.0%
CCATTATGAAAGAAGGAAAC+AGG - chr2_1:7673147-7673166 Msa0191940:intron 35.0%
GTGTTCTCACTTACTTTACT+TGG + chr2_1:7673205-7673224 None:intergenic 35.0%
AGTGAGAACACATTCATTGA+AGG - chr2_1:7673214-7673233 Msa0191940:intron 35.0%
AACTGTTTGGAAACAAGGTT+AGG + chr2_1:7673469-7673488 None:intergenic 35.0%
TGAATTTCGGAGACAAGAAA+GGG + chr2_1:7673523-7673542 None:intergenic 35.0%
TTGAATTTCGGAGACAAGAA+AGG + chr2_1:7673524-7673543 None:intergenic 35.0%
!! GAAATAGCTTTATAAAGGCC+GGG - chr2_1:7673695-7673714 Msa0191940:CDS 35.0%
TATACATATTGTCTGAGTGG+GGG - chr2_1:7673925-7673944 Msa0191940:intron 35.0%
GTGAGTACAATACTGAAACT+AGG - chr2_1:7674011-7674030 Msa0191940:intron 35.0%
CTAGGGTTTAGTATCTGATT+AGG - chr2_1:7674029-7674048 Msa0191940:intron 35.0%
AGGCTATAAATAACTCCCTT+GGG + chr2_1:7674073-7674092 None:intergenic 35.0%
AAGGCTATAAATAACTCCCT+TGG + chr2_1:7674074-7674093 None:intergenic 35.0%
TATGCGTTTCTACCTATCTT+GGG + chr2_1:7674134-7674153 None:intergenic 35.0%
ATATGCGTTTCTACCTATCT+TGG + chr2_1:7674135-7674154 None:intergenic 35.0%
AGCCAGAATATCCATATTTG+GGG + chr2_1:7674162-7674181 None:intergenic 35.0%
CAGCCAGAATATCCATATTT+GGG + chr2_1:7674163-7674182 None:intergenic 35.0%
TCAGCCAGAATATCCATATT+TGG + chr2_1:7674164-7674183 None:intergenic 35.0%
GACCACCAATACTCAAATAA+GGG + chr2_1:7674286-7674305 None:intergenic 35.0%
ATTATCCTACAAATGAACCC+TGG + chr2_1:7674361-7674380 None:intergenic 35.0%
ATGCTCTAATTGGAACTTAC+TGG - chr2_1:7674379-7674398 Msa0191940:intron 35.0%
TGAACATTGAAAACAGTTCC+AGG + chr2_1:7674564-7674583 None:intergenic 35.0%
GAAACTTGGTTAGACAACTA+GGG + chr2_1:7674653-7674672 None:intergenic 35.0%
CTAGTTGTCTAACCAAGTTT+CGG - chr2_1:7674652-7674671 Msa0191940:intron 35.0%
AGAAAACAATCACCGAAACT+TGG + chr2_1:7674667-7674686 None:intergenic 35.0%
CTTGGTACACAACAAAATTG+TGG - chr2_1:7674760-7674779 Msa0191940:intron 35.0%
TTAAGACTGTCACGACAAAA+GGG + chr2_1:7674894-7674913 None:intergenic 35.0%
! TTTAAGACTGTCACGACAAA+AGG + chr2_1:7674895-7674914 None:intergenic 35.0%
TAACAAGAGAGAACCTTAGA+AGG - chr2_1:7674979-7674998 Msa0191940:intron 35.0%
TGTACATGAAAAGCCTTCTA+AGG + chr2_1:7674995-7675014 None:intergenic 35.0%
TAAGGATCAAAAAGGGATTC+TGG + chr2_1:7675041-7675060 None:intergenic 35.0%
GAGAGTCATAAGGATCAAAA+AGG + chr2_1:7675049-7675068 None:intergenic 35.0%
CACAGAAATGTGTTCTTTGA+TGG - chr2_1:7675092-7675111 Msa0191940:intron 35.0%
AGTTGGTCATGAAGTTGAAA+TGG - chr2_1:7675232-7675251 Msa0191940:intron 35.0%
!!! AAGATTTGTTTTAGGAGGGA+GGG + chr2_1:7675372-7675391 None:intergenic 35.0%
!!! AAAGATTTGTTTTAGGAGGG+AGG + chr2_1:7675373-7675392 None:intergenic 35.0%
TTGATCATGAATGCATTGGA+TGG - chr2_1:7675391-7675410 Msa0191940:CDS 35.0%
TGGTTCATAGTCTAAGTTGT+TGG + chr2_1:7675437-7675456 None:intergenic 35.0%
GGAAACATGTACATAAGTGG+TGG - chr2_1:7670272-7670291 Msa0191940:three_prime_UTR 40.0%
! TTCCATGGGAAGGTCTTTTA+AGG - chr2_1:7670301-7670320 Msa0191940:three_prime_UTR 40.0%
TTCCTTAAAAGACCTTCCCA+TGG + chr2_1:7670306-7670325 None:intergenic 40.0%
! AACAGTGTCTCTGTCTTGTT+GGG - chr2_1:7670667-7670686 Msa0191940:exon 40.0%
GTACAACACAAAGGTAGTGA+AGG + chr2_1:7670886-7670905 None:intergenic 40.0%
ACCTTTGTGTTGTACTCAGA+TGG - chr2_1:7670891-7670910 Msa0191940:intron 40.0%
TCCATCTGAGTACAACACAA+AGG + chr2_1:7670895-7670914 None:intergenic 40.0%
TTTCTCCACCTTATGGTATG+TGG - chr2_1:7671010-7671029 Msa0191940:intron 40.0%
TTCTCCACCTTATGGTATGT+GGG - chr2_1:7671011-7671030 Msa0191940:intron 40.0%
TGTTAGCAGGGATAGTACTT+TGG - chr2_1:7671045-7671064 Msa0191940:intron 40.0%
CTGTATTTGTGATGAGTCTC+TGG - chr2_1:7671189-7671208 Msa0191940:intron 40.0%
TGATGAGTCTCTGGTGAAAT+TGG - chr2_1:7671198-7671217 Msa0191940:intron 40.0%
! GGTGAAATTGGACTAGAGAA+AGG - chr2_1:7671210-7671229 Msa0191940:intron 40.0%
TCAAGAAAAAGTTGCTGGAG+AGG + chr2_1:7671322-7671341 None:intergenic 40.0%
GATCATATAATTGGGCGTGT+AGG - chr2_1:7671363-7671382 Msa0191940:intron 40.0%
!! AGCGCACTTGTTTCTTTTTC+TGG - chr2_1:7671451-7671470 Msa0191940:intron 40.0%
GCATAAACACTTGTCAGACT+GGG - chr2_1:7671626-7671645 Msa0191940:intron 40.0%
ACCATTCATGGTAGCATTTC+AGG + chr2_1:7672190-7672209 None:intergenic 40.0%
! CAGATTTTGCATAAGCGACA+TGG - chr2_1:7672530-7672549 Msa0191940:intron 40.0%
! TTTTGAATTGTGTGGTCCAG+TGG - chr2_1:7672946-7672965 Msa0191940:intron 40.0%
GACTTCACTAAAGGGTGAAA+GGG + chr2_1:7672981-7673000 None:intergenic 40.0%
GCAAGTGAGAACACAATCAT+TGG - chr2_1:7673256-7673275 Msa0191940:intron 40.0%
GTGAGAACACAATCATTGGA+TGG - chr2_1:7673260-7673279 Msa0191940:intron 40.0%
GTTGCAACTGTTTGGAAACA+AGG + chr2_1:7673474-7673493 None:intergenic 40.0%
TGTTTCCAAACAGTTGCAAC+TGG - chr2_1:7673474-7673493 Msa0191940:intron 40.0%
GACTCAATTTCGCGAGTTTA+AGG + chr2_1:7673602-7673621 None:intergenic 40.0%
TTGTAATCTCACACTAGTCC+CGG + chr2_1:7673716-7673735 None:intergenic 40.0%
!!! AGCGTGTTGCTATTTTCTTC+TGG - chr2_1:7673749-7673768 Msa0191940:CDS 40.0%
TTAGATTCTGTCAGTCTCTC+AGG - chr2_1:7673895-7673914 Msa0191940:intron 40.0%
TATCTGATTAGGTCATGCCT+TGG - chr2_1:7674040-7674059 Msa0191940:intron 40.0%
ATCTGATTAGGTCATGCCTT+GGG - chr2_1:7674041-7674060 Msa0191940:intron 40.0%
ACGTAATAAGAGGCCCAAAA+AGG + chr2_1:7674093-7674112 None:intergenic 40.0%
GGAGTAAGTCACGTAATAAG+AGG + chr2_1:7674103-7674122 None:intergenic 40.0%
TACCTATCTTGGGTGACTTA+GGG + chr2_1:7674124-7674143 None:intergenic 40.0%
CCAGAATATCCATATTTGGG+GGG + chr2_1:7674160-7674179 None:intergenic 40.0%
GCCAGAATATCCATATTTGG+GGG + chr2_1:7674161-7674180 None:intergenic 40.0%
! GGATATTCTGGCTGAATATC+TGG - chr2_1:7674169-7674188 Msa0191940:intron 40.0%
GGACCACCAATACTCAAATA+AGG + chr2_1:7674287-7674306 None:intergenic 40.0%
AACCCAGACTGTTGTTCTTT+AGG - chr2_1:7674448-7674467 Msa0191940:intron 40.0%
AGCCTAAAGAACAACAGTCT+GGG + chr2_1:7674453-7674472 None:intergenic 40.0%
AAGCCTAAAGAACAACAGTC+TGG + chr2_1:7674454-7674473 None:intergenic 40.0%
CGAAACTTGGTTAGACAACT+AGG + chr2_1:7674654-7674673 None:intergenic 40.0%
TAAGACTGTCACGACAAAAG+GGG + chr2_1:7674893-7674912 None:intergenic 40.0%
TCTGGATATTCACCGATAGT+AGG - chr2_1:7674934-7674953 Msa0191940:intron 40.0%
CTGGATATTCACCGATAGTA+GGG - chr2_1:7674935-7674954 Msa0191940:intron 40.0%
GTCTACTATGTCCCTACTAT+CGG + chr2_1:7674949-7674968 None:intergenic 40.0%
TAGTAGGGACATAGTAGACA+TGG - chr2_1:7674950-7674969 Msa0191940:intron 40.0%
AGGGATTCTGGTATGATCAA+AGG + chr2_1:7675029-7675048 None:intergenic 40.0%
GAAATGTGTTCTTTGATGGG+TGG - chr2_1:7675096-7675115 Msa0191940:intron 40.0%
GTTGAATGCAGACTTTGTTG+TGG - chr2_1:7675491-7675510 Msa0191940:five_prime_UTR 40.0%
AAGTGGTGGTTCTTCTTCCA+TGG - chr2_1:7670286-7670305 Msa0191940:three_prime_UTR 45.0%
AGTGGTGGTTCTTCTTCCAT+GGG - chr2_1:7670287-7670306 Msa0191940:three_prime_UTR 45.0%
AGACACTGTTGATCGTTGAG+TGG + chr2_1:7670657-7670676 None:intergenic 45.0%
CAACAGTGTCTCTGTCTTGT+TGG - chr2_1:7670666-7670685 Msa0191940:exon 45.0%
! ACAGTGTCTCTGTCTTGTTG+GGG - chr2_1:7670668-7670687 Msa0191940:exon 45.0%
TCTCCACCTTATGGTATGTG+GGG - chr2_1:7671012-7671031 Msa0191940:intron 45.0%
ACAATGCCCCACATACCATA+AGG + chr2_1:7671021-7671040 None:intergenic 45.0%
GGCATTGTCACATGTTAGCA+GGG - chr2_1:7671033-7671052 Msa0191940:intron 45.0%
! TGGACTAGAGAAAGGTTTCG+AGG - chr2_1:7671218-7671237 Msa0191940:intron 45.0%
!! TAGGGCATCTGATTTTCCGA+GGG - chr2_1:7671382-7671401 Msa0191940:intron 45.0%
! GATTTTCCGAGGGAATACGA+TGG - chr2_1:7671392-7671411 Msa0191940:intron 45.0%
AAAAGAAACAAGTGCGCTGC+TGG + chr2_1:7671449-7671468 None:intergenic 45.0%
TGGACAGATTGCAATCTTGC+TGG - chr2_1:7671479-7671498 Msa0191940:intron 45.0%
GGCATAAACACTTGTCAGAC+TGG - chr2_1:7671625-7671644 Msa0191940:intron 45.0%
ATGCTGTAGGTGTATGTGGA+TGG - chr2_1:7671804-7671823 Msa0191940:intron 45.0%
TGCTGTAGGTGTATGTGGAT+GGG - chr2_1:7671805-7671824 Msa0191940:intron 45.0%
AGAAGGTTGTATGCATGGAG+CGG - chr2_1:7672036-7672055 Msa0191940:intron 45.0%
GTATCGTAGAAGAGAAGACG+AGG - chr2_1:7672058-7672077 Msa0191940:intron 45.0%
CACATGACATGGTTGCAGTT+AGG + chr2_1:7672167-7672186 None:intergenic 45.0%
AGCATTTCAGGCACATGACA+TGG + chr2_1:7672178-7672197 None:intergenic 45.0%
GCCTGAAATGCTACCATGAA+TGG - chr2_1:7672186-7672205 Msa0191940:intron 45.0%
!! GCAAGAGAGAGTACCATTCA+TGG + chr2_1:7672202-7672221 None:intergenic 45.0%
! TAACAGGCACCGTAAGAAGA+GGG - chr2_1:7672589-7672608 Msa0191940:intron 45.0%
AATTGGAGTTGGGTAAGTGG+TGG + chr2_1:7672820-7672839 None:intergenic 45.0%
GGACTTCACTAAAGGGTGAA+AGG + chr2_1:7672982-7673001 None:intergenic 45.0%
! GAGCAACGGACTTCACTAAA+GGG + chr2_1:7672989-7673008 None:intergenic 45.0%
! AGAGCAACGGACTTCACTAA+AGG + chr2_1:7672990-7673009 None:intergenic 45.0%
TCCTCGCATCTAAAGAGCAA+CGG + chr2_1:7673003-7673022 None:intergenic 45.0%
TTGCTCTTTAGATGCGAGGA+AGG - chr2_1:7673003-7673022 Msa0191940:intron 45.0%
CTGACTCACGATCTTCAAAC+AGG + chr2_1:7673342-7673361 None:intergenic 45.0%
! AGATCGTGAGTCAGCATTGA+AGG - chr2_1:7673348-7673367 Msa0191940:intron 45.0%
!! GAAGGCTTAGTTTGCGTTGT+TGG - chr2_1:7673366-7673385 Msa0191940:intron 45.0%
!!! AGACTTTTTTTCGCGTCACC+AGG - chr2_1:7673395-7673414 Msa0191940:intron 45.0%
!!! TTTTTTTCGCGTCACCAGGA+TGG - chr2_1:7673399-7673418 Msa0191940:intron 45.0%
CGCAAACAAAATCTCCATCC+TGG + chr2_1:7673416-7673435 None:intergenic 45.0%
TTTGCGTCATCCACGACAAT+AGG - chr2_1:7673430-7673449 Msa0191940:intron 45.0%
TGTCACAGAACCTATTGTCG+TGG + chr2_1:7673443-7673462 None:intergenic 45.0%
CTCATCCAGTTGCAACTGTT+TGG + chr2_1:7673482-7673501 None:intergenic 45.0%
CCTCTTTATGCTTGCTCCAA+AGG + chr2_1:7673653-7673672 None:intergenic 45.0%
!! CCTTTGGAGCAAGCATAAAG+AGG - chr2_1:7673650-7673669 Msa0191940:CDS 45.0%
CTACCTATCTTGGGTGACTT+AGG + chr2_1:7674125-7674144 None:intergenic 45.0%
CGCATATATCCCCCCAAATA+TGG - chr2_1:7674148-7674167 Msa0191940:intron 45.0%
CCCCCCAAATATGGATATTC+TGG - chr2_1:7674157-7674176 Msa0191940:intron 45.0%
!! GGCCCTTATTTGAGTATTGG+TGG - chr2_1:7674281-7674300 Msa0191940:intron 45.0%
TTAACCAAGACTCATGCTCG+GGG + chr2_1:7674316-7674335 None:intergenic 45.0%
CTTAACCAAGACTCATGCTC+GGG + chr2_1:7674317-7674336 None:intergenic 45.0%
CCTTAACCAAGACTCATGCT+CGG + chr2_1:7674318-7674337 None:intergenic 45.0%
CGAGCATGAGTCTTGGTTAA+GGG - chr2_1:7674316-7674335 Msa0191940:CDS 45.0%
GTTAAGGGCGAAGTGGTTAT+TGG - chr2_1:7674331-7674350 Msa0191940:CDS 45.0%
CAACAGTCTGGGTTCATACT+CGG + chr2_1:7674442-7674461 None:intergenic 45.0%
! TTCTTTTCTGCCTCGTGTCT+TGG - chr2_1:7674742-7674761 Msa0191940:intron 45.0%
TTGTTGTGTACCAAGACACG+AGG + chr2_1:7674755-7674774 None:intergenic 45.0%
! GTGTTCTTTGATGGGTGGTT+CGG - chr2_1:7675101-7675120 Msa0191940:intron 45.0%
AACTCAAGGCTGGAATCTTC+TGG + chr2_1:7675205-7675224 None:intergenic 45.0%
ACCAACTCATCGCAAACTCA+AGG + chr2_1:7675219-7675238 None:intergenic 45.0%
!!! CATTTTTTTATTTTTTAAAA+TGG + chr2_1:7673560-7673579 None:intergenic 5.0%
GTGGTTCTTCTTCCATGGGA+AGG - chr2_1:7670291-7670310 Msa0191940:three_prime_UTR 50.0%
ATGCCCCACATACCATAAGG+TGG + chr2_1:7671018-7671037 None:intergenic 50.0%
! GGGCATTGTCACATGTTAGC+AGG - chr2_1:7671032-7671051 Msa0191940:intron 50.0%
!! GTAGGGCATCTGATTTTCCG+AGG - chr2_1:7671381-7671400 Msa0191940:intron 50.0%
CCACATACACCTACAGCATG+AGG + chr2_1:7671803-7671822 None:intergenic 50.0%
CCTCATGCTGTAGGTGTATG+TGG - chr2_1:7671800-7671819 Msa0191940:intron 50.0%
!! AAGAGGTGTCACTGATGCTG+AGG - chr2_1:7672004-7672023 Msa0191940:intron 50.0%
CTCTTCTTACGGTGCCTGTT+AGG + chr2_1:7672590-7672609 None:intergenic 50.0%
! CTAACAGGCACCGTAAGAAG+AGG - chr2_1:7672588-7672607 Msa0191940:intron 50.0%
GAAAGGGCAATGATCACCAC+TGG + chr2_1:7672965-7672984 None:intergenic 50.0%
TCCGTTGCTCTTTAGATGCG+AGG - chr2_1:7672999-7673018 Msa0191940:intron 50.0%
CTGCTCGCTCGAAATAGAGA+GGG - chr2_1:7673314-7673333 Msa0191940:intron 50.0%
TGCTCGCTCGAAATAGAGAG+GGG - chr2_1:7673315-7673334 Msa0191940:intron 50.0%
TTTGATGCATGGTAGGGGCA+AGG + chr2_1:7673951-7673970 None:intergenic 50.0%
ATGCCTTGGGAATGATCCCA+AGG - chr2_1:7674054-7674073 Msa0191940:intron 50.0%
TGCCTTGGGAATGATCCCAA+GGG - chr2_1:7674055-7674074 Msa0191940:intron 50.0%
CTCCCTAAGTCACCCAAGAT+AGG - chr2_1:7674119-7674138 Msa0191940:intron 50.0%
! CTTGATGGTTTCGGGGGATA+AGG - chr2_1:7674206-7674225 Msa0191940:intron 50.0%
ATGGTTTCGGGGGATAAGGA+GGG - chr2_1:7674210-7674229 Msa0191940:intron 50.0%
GTAGGCGACGTCCTTGTATA+GGG - chr2_1:7674252-7674271 Msa0191940:CDS 50.0%
ACGTCCTTGTATAGGGCTAG+CGG - chr2_1:7674259-7674278 Msa0191940:intron 50.0%
! GCGGGCCCTTATTTGAGTAT+TGG - chr2_1:7674278-7674297 Msa0191940:intron 50.0%
TAACCAAGACTCATGCTCGG+GGG + chr2_1:7674315-7674334 None:intergenic 50.0%
CCGAGCATGAGTCTTGGTTA+AGG - chr2_1:7674315-7674334 Msa0191940:CDS 50.0%
AGTCTTGGTTAAGGGCGAAG+TGG - chr2_1:7674324-7674343 Msa0191940:CDS 50.0%
AAGGGCGAAGTGGTTATTGG+CGG - chr2_1:7674334-7674353 Msa0191940:CDS 50.0%
AAGTGGTTATTGGCGGTCCA+GGG - chr2_1:7674341-7674360 Msa0191940:CDS 50.0%
! TCTTTGATGGGTGGTTCGGA+TGG - chr2_1:7675105-7675124 Msa0191940:intron 50.0%
! CTGGAATCTTCTGGAAGACG+TGG + chr2_1:7675196-7675215 None:intergenic 50.0%
ACTCATCGCAAACTCAAGGC+TGG + chr2_1:7675215-7675234 None:intergenic 50.0%
GCCTTGAGTTTGCGATGAGT+TGG - chr2_1:7675215-7675234 Msa0191940:intron 50.0%
CACGCACCATCGTATTCCCT+CGG + chr2_1:7671401-7671420 None:intergenic 55.0%
TGCAATCTTGCTGGAGCCCT+TGG - chr2_1:7671488-7671507 Msa0191940:intron 55.0%
ATGCGAGGAAGGAGCAAGCA+AGG - chr2_1:7673014-7673033 Msa0191940:intron 55.0%
CGAGCGAGCAGCAAACTGAA+CGG + chr2_1:7673305-7673324 None:intergenic 55.0%
GCTGCTCGCTCGAAATAGAG+AGG - chr2_1:7673313-7673332 Msa0191940:intron 55.0%
CTCCCTTGGGATCATTCCCA+AGG + chr2_1:7674060-7674079 None:intergenic 55.0%
! GGTTCGGGCTTGATGGTTTC+GGG - chr2_1:7674198-7674217 Msa0191940:intron 55.0%
! GTTCGGGCTTGATGGTTTCG+GGG - chr2_1:7674199-7674218 Msa0191940:intron 55.0%
! TTCGGGCTTGATGGTTTCGG+GGG - chr2_1:7674200-7674219 Msa0191940:intron 55.0%
GATGGTTTCGGGGGATAAGG+AGG - chr2_1:7674209-7674228 Msa0191940:intron 55.0%
TGGTTTCGGGGGATAAGGAG+GGG - chr2_1:7674211-7674230 Msa0191940:intron 55.0%
CGTAGGCGACGTCCTTGTAT+AGG - chr2_1:7674251-7674270 Msa0191940:CDS 55.0%
! CGTCCTTGTATAGGGCTAGC+GGG - chr2_1:7674260-7674279 Msa0191940:intron 55.0%
GAAGTGGTTATTGGCGGTCC+AGG - chr2_1:7674340-7674359 Msa0191940:CDS 55.0%
GCGGTCCAGGGTTCATTTGT+AGG - chr2_1:7674353-7674372 Msa0191940:CDS 55.0%
GAGTAAACTCGGGCGATCTC+TGG - chr2_1:7674916-7674935 Msa0191940:intron 55.0%
AGCATGCCCTACGCAAGCGT+AGG - chr2_1:7674234-7674253 Msa0191940:CDS 60.0%
ACGTCGCCTACGCTTGCGTA+GGG + chr2_1:7674243-7674262 None:intergenic 60.0%
AGTCCCCCGAGCATGAGTCT+TGG - chr2_1:7674309-7674328 Msa0191940:CDS 60.0%
GACGTCGCCTACGCTTGCGT+AGG + chr2_1:7674244-7674263 None:intergenic 65.0%
GGGCCCGCTAGCCCTATACA+AGG + chr2_1:7674266-7674285 None:intergenic 65.0%
GACTCATGCTCGGGGGACTG+TGG + chr2_1:7674308-7674327 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7670198 7675562 7670198 ID=Msa0191940;Name=Msa0191940
chr2_1 mRNA 7670198 7675562 7670198 ID=Msa0191940-mRNA-1;Parent=Msa0191940;Name=Msa0191940-mRNA-1;_AED=0.14;_eAED=0.14;_QI=80|0.25|0.4|1|0.5|0.6|5|483|212
chr2_1 exon 7670198 7670891 7670198 ID=Msa0191940-mRNA-1:exon:3534;Parent=Msa0191940-mRNA-1
chr2_1 exon 7673577 7673787 7673577 ID=Msa0191940-mRNA-1:exon:3533;Parent=Msa0191940-mRNA-1
chr2_1 exon 7674225 7674274 7674225 ID=Msa0191940-mRNA-1:exon:3532;Parent=Msa0191940-mRNA-1
chr2_1 exon 7674301 7674375 7674301 ID=Msa0191940-mRNA-1:exon:3531;Parent=Msa0191940-mRNA-1
chr2_1 exon 7675391 7675562 7675391 ID=Msa0191940-mRNA-1:exon:3530;Parent=Msa0191940-mRNA-1
chr2_1 five_prime_UTR 7675483 7675562 7675483 ID=Msa0191940-mRNA-1:five_prime_utr;Parent=Msa0191940-mRNA-1
chr2_1 CDS 7675391 7675482 7675391 ID=Msa0191940-mRNA-1:cds;Parent=Msa0191940-mRNA-1
chr2_1 CDS 7674301 7674375 7674301 ID=Msa0191940-mRNA-1:cds;Parent=Msa0191940-mRNA-1
chr2_1 CDS 7674225 7674274 7674225 ID=Msa0191940-mRNA-1:cds;Parent=Msa0191940-mRNA-1
chr2_1 CDS 7673577 7673787 7673577 ID=Msa0191940-mRNA-1:cds;Parent=Msa0191940-mRNA-1
chr2_1 CDS 7670681 7670891 7670681 ID=Msa0191940-mRNA-1:cds;Parent=Msa0191940-mRNA-1
chr2_1 three_prime_UTR 7670198 7670680 7670198 ID=Msa0191940-mRNA-1:three_prime_utr;Parent=Msa0191940-mRNA-1
Gene Sequence

>Msa0191940

ATGTACATAAGTGGTGGTTCTTCTTCCATGGGAAGGTCTTTTAAGGAATCTCTTAAACTGCTTGAAGCTGATATTCATCATGCCAATACCTTGGCATCTGATTTTCCGAGGGAATACGATGGTGCGTGTCTTCAGATGAGAATGTCATACAGTCCAGCAGCGCACTTATTGCAATCTTGCTGGAGCCCTTGGATTATTAAGAATTCTAATTTACAAGCGGTCATATATCCGTCTTTGTTACAACTTGAAAGAGGTGTCACTGATGCTGAGGATAAAAAACAGAAGGTTGTATGCATGGAGCGGTATCGTAGAAGAGAAGACGAGGAGCACAAACAATTCTCAGACATAGACTTTGAAAGAGAAGAAGAGTGTGGAATATGTATGGAGATGAATAGCAAGATTGTGTTGCCTAACTGCAACCATGTCATGAGAGCAAGATCACAGTCATGCCCCTTTTGTCGTGACAGTCTTAAAAGAGTAAACTCGGGCGATCTCTGGATATTCACCGATAGTAGGGACATAGTAGACATGGAAACAGTAACAAGAGAGAACCTTAGAAGGCTTTTCATGTACATAGATAAGTTACCTTTGATCATACCAGAATCCCTTTTTGATCCTTATGACTCTCACTTAAGATAA
Protein sequence

>Msa0191940

MYISGGSSSMGRSFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLLQSCWSPWIIKNSNLQAVIYPSLLQLERGVTDAEDKKQKVVCMERYRRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMRARSQSCPFCRDSLKRVNSGDLWIFTDSRDIVDMETVTRENLRRLFMYIDKLPLIIPESLFDPYDSHLR*