Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866950 | XP_013461918.1 | 91.341 | 358 | 8 | 2 | 1 | 335 | 1 | 358 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866950 | A0A072V3M1 | 91.341 | 358 | 8 | 2 | 1 | 335 | 1 | 358 | 0.0 | 668 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001240 | Msa0866950 | 0.811778 | 5.905180e-51 | -8.615850e-47 |
| Msa0020930 | Msa0866950 | 0.828504 | 8.668479e-55 | -8.615850e-47 |
| Msa0025740 | Msa0866950 | 0.800599 | 1.336173e-48 | -8.615850e-47 |
| Msa0032110 | Msa0866950 | 0.832492 | 9.163511e-56 | -8.615850e-47 |
| Msa0043980 | Msa0866950 | 0.811678 | 6.207210e-51 | -8.615850e-47 |
| Msa0054730 | Msa0866950 | -0.814429 | 1.547621e-51 | -8.615850e-47 |
| Msa0068680 | Msa0866950 | 0.810522 | 1.105356e-50 | -8.615850e-47 |
| Msa0074700 | Msa0866950 | 0.844921 | 5.604447e-59 | -8.615850e-47 |
| Msa0083280 | Msa0866950 | 0.848504 | 5.877770e-60 | -8.615850e-47 |
| Msa0084780 | Msa0866950 | 0.816784 | 4.625748e-52 | -8.615850e-47 |
| Msa0090100 | Msa0866950 | 0.812987 | 3.214865e-51 | -8.615850e-47 |
| Msa0095560 | Msa0866950 | 0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa0114060 | Msa0866950 | 0.825200 | 5.336480e-54 | -8.615850e-47 |
| Msa0118990 | Msa0866950 | 0.826423 | 2.735211e-54 | -8.615850e-47 |
| Msa0607050 | Msa0866950 | 0.809706 | 1.657583e-50 | -8.615850e-47 |
| Msa0608710 | Msa0866950 | 0.865766 | 4.654332e-65 | -8.615850e-47 |
| Msa0629780 | Msa0866950 | 0.805144 | 1.537970e-49 | -8.615850e-47 |
| Msa0661190 | Msa0866950 | -0.803238 | 3.835660e-49 | -8.615850e-47 |
| Msa0688480 | Msa0866950 | 0.808600 | 2.859565e-50 | -8.615850e-47 |
| Msa0690150 | Msa0866950 | 0.802596 | 5.203640e-49 | -8.615850e-47 |
| Msa0702830 | Msa0866950 | 0.818542 | 1.856107e-52 | -8.615850e-47 |
| Msa0709400 | Msa0866950 | 0.821171 | 4.652798e-53 | -8.615850e-47 |
| Msa0711100 | Msa0866950 | 0.803775 | 2.967171e-49 | -8.615850e-47 |
| Msa0740510 | Msa0866950 | 0.829746 | 4.331935e-55 | -8.615850e-47 |
| Msa0802010 | Msa0866950 | 0.855053 | 8.165610e-62 | -8.615850e-47 |
| Msa0820770 | Msa0866950 | 0.840555 | 8.104576e-58 | -8.615850e-47 |
| Msa0825080 | Msa0866950 | 0.800206 | 1.606744e-48 | -8.615850e-47 |
| Msa0832150 | Msa0866950 | 0.812364 | 4.400900e-51 | -8.615850e-47 |
| Msa0121620 | Msa0866950 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
| Msa0123560 | Msa0866950 | 0.822607 | 2.164237e-53 | -8.615850e-47 |
| Msa0127650 | Msa0866950 | 0.829555 | 4.820866e-55 | -8.615850e-47 |
| Msa0137730 | Msa0866950 | 0.804259 | 2.353867e-49 | -8.615850e-47 |
| Msa0159930 | Msa0866950 | 0.832949 | 7.058763e-56 | -8.615850e-47 |
| Msa0183050 | Msa0866950 | 0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0189320 | Msa0866950 | 0.800185 | 1.622939e-48 | -8.615850e-47 |
| Msa0191050 | Msa0866950 | 0.820100 | 8.196529e-53 | -8.615850e-47 |
| Msa0191940 | Msa0866950 | 0.830904 | 2.257987e-55 | -8.615850e-47 |
| Msa0194950 | Msa0866950 | -0.836269 | 1.032911e-56 | -8.615850e-47 |
| Msa0217680 | Msa0866950 | 0.803500 | 3.385103e-49 | -8.615850e-47 |
| Msa0220580 | Msa0866950 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0233350 | Msa0866950 | 0.818474 | 1.923186e-52 | -8.615850e-47 |
| Msa0234050 | Msa0866950 | 0.828621 | 8.121718e-55 | -8.615850e-47 |
| Msa0236630 | Msa0866950 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0236960 | Msa0866950 | -0.806432 | 8.251661e-50 | -8.615850e-47 |
| Msa0373930 | Msa0866950 | 0.813170 | 2.931621e-51 | -8.615850e-47 |
| Msa0379640 | Msa0866950 | 0.828959 | 6.724880e-55 | -8.615850e-47 |
| Msa0398670 | Msa0866950 | 0.813409 | 2.597500e-51 | -8.615850e-47 |
| Msa0399340 | Msa0866950 | 0.813577 | 2.385223e-51 | -8.615850e-47 |
| Msa0411160 | Msa0866950 | 0.835841 | 1.326645e-56 | -8.615850e-47 |
| Msa0411190 | Msa0866950 | 0.847633 | 1.021851e-59 | -8.615850e-47 |
| Msa0428930 | Msa0866950 | 0.819049 | 1.424442e-52 | -8.615850e-47 |
| Msa0433360 | Msa0866950 | 0.855441 | 6.296894e-62 | -8.615850e-47 |
| Msa0436760 | Msa0866950 | 0.813406 | 2.600813e-51 | -8.615850e-47 |
| Msa0455040 | Msa0866950 | 0.804665 | 1.936674e-49 | -8.615850e-47 |
| Msa0477080 | Msa0866950 | 0.924145 | 1.040610e-89 | -8.615850e-47 |
| Msa0479820 | Msa0866950 | 0.802230 | 6.191620e-49 | -8.615850e-47 |
| Msa0479970 | Msa0866950 | 0.836880 | 7.218942e-57 | -8.615850e-47 |
| Msa0271510 | Msa0866950 | 0.818862 | 1.570338e-52 | -8.615850e-47 |
| Msa0287410 | Msa0866950 | 0.823075 | 1.683724e-53 | -8.615850e-47 |
| Msa0291500 | Msa0866950 | 0.815092 | 1.103746e-51 | -8.615850e-47 |
| Msa0308270 | Msa0866950 | 0.831496 | 1.615268e-55 | -8.615850e-47 |
| Msa0315440 | Msa0866950 | -0.824588 | 7.441817e-54 | -8.615850e-47 |
| Msa0329350 | Msa0866950 | 0.802407 | 5.693274e-49 | -8.615850e-47 |
| Msa0334550 | Msa0866950 | 0.806069 | 9.838914e-50 | -8.615850e-47 |
| Msa0352330 | Msa0866950 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0484720 | Msa0866950 | 0.813974 | 1.950136e-51 | -8.615850e-47 |
| Msa0493630 | Msa0866950 | 0.932052 | 1.516693e-94 | -8.615850e-47 |
| Msa0502100 | Msa0866950 | 0.828619 | 8.129768e-55 | -8.615850e-47 |
| Msa0510920 | Msa0866950 | 0.828665 | 7.924899e-55 | -8.615850e-47 |
| Msa0521430 | Msa0866950 | 0.911143 | 8.488231e-83 | -8.615850e-47 |
| Msa0555200 | Msa0866950 | 0.842063 | 3.250521e-58 | -8.615850e-47 |
| Msa0566310 | Msa0866950 | 0.835397 | 1.718981e-56 | -8.615850e-47 |
| Msa0592710 | Msa0866950 | 0.830388 | 3.021112e-55 | -8.615850e-47 |
| Msa0861090 | Msa0866950 | 0.831513 | 1.599680e-55 | -8.615850e-47 |
| Msa0866950 | Msa0923260 | -0.804948 | 1.690618e-49 | -8.615850e-47 |
| Msa0866950 | Msa0933230 | 0.825797 | 3.853483e-54 | -8.615850e-47 |
| Msa0866950 | Msa0933310 | 0.820260 | 7.533405e-53 | -8.615850e-47 |
| Msa0866950 | Msa0971090 | 0.825549 | 4.412523e-54 | -8.615850e-47 |
| Msa0866950 | Msa0981590 | 0.801792 | 7.618896e-49 | -8.615850e-47 |
| Msa0866950 | Msa1016910 | 0.816849 | 4.474237e-52 | -8.615850e-47 |
| Msa0866950 | Msa1023920 | 0.809007 | 2.340541e-50 | -8.615850e-47 |
| Msa0866950 | Msa1034150 | 0.807754 | 4.331150e-50 | -8.615850e-47 |
| Msa0866950 | Msa1055680 | 0.805516 | 1.285591e-49 | -8.615850e-47 |
| Msa0866950 | Msa1058170 | 0.838687 | 2.479301e-57 | -8.615850e-47 |
| Msa0866950 | Msa1058750 | 0.818713 | 1.698357e-52 | -8.615850e-47 |
| Msa0866950 | Msa1082500 | 0.808856 | 2.522028e-50 | -8.615850e-47 |
| Msa0866950 | Msa1087850 | 0.831036 | 2.095416e-55 | -8.615850e-47 |
| Msa0866950 | Msa1102790 | 0.844790 | 6.079402e-59 | -8.615850e-47 |
| Msa0866950 | Msa1107900 | 0.805364 | 1.383735e-49 | -8.615850e-47 |
| Msa0866950 | Msa1114410 | 0.805890 | 1.072902e-49 | -8.615850e-47 |
| Msa0866950 | Msa1124960 | 0.818614 | 1.787809e-52 | -8.615850e-47 |
| Msa0866950 | Msa1151720 | 0.816571 | 5.162315e-52 | -8.615850e-47 |
| Msa0866950 | Msa1159840 | 0.840881 | 6.654657e-58 | -8.615850e-47 |
| Msa0866950 | Msa1170410 | 0.826148 | 3.179591e-54 | -8.615850e-47 |
| Msa0866950 | Msa1203050 | 0.808923 | 2.439925e-50 | -8.615850e-47 |
| Msa0866950 | Msa1204530 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0866950 | Msa1209010 | 0.816791 | 4.608872e-52 | -8.615850e-47 |
| Msa0866950 | Msa1244720 | -0.840883 | 6.649597e-58 | -8.615850e-47 |
| Msa0866950 | Msa1247250 | 0.801969 | 7.006435e-49 | -8.615850e-47 |
| Msa0866950 | Msa1255330 | 0.816968 | 4.205906e-52 | -8.615850e-47 |
| Msa0866950 | Msa1267430 | 0.812333 | 4.468606e-51 | -8.615850e-47 |
| Msa0866950 | Msa1294480 | 0.803816 | 2.909886e-49 | -8.615850e-47 |
| Msa0866950 | Msa1295950 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0866950 | Msa1296760 | 0.805604 | 1.231988e-49 | -8.615850e-47 |
| Msa0866950 | Msa1305660 | 0.815772 | 7.790640e-52 | -8.615850e-47 |
| Msa0866950 | Msa1331320 | 0.828774 | 7.455852e-55 | -8.615850e-47 |
| Msa0866950 | Msa1335540 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0866950 | Msa1341950 | 0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0866950 | Msa1351890 | 0.823738 | 1.178527e-53 | -8.615850e-47 |
| Msa0866950 | Msa1356140 | 0.811299 | 7.504785e-51 | -8.615850e-47 |
| Msa0866950 | Msa1374470 | 0.820090 | 8.240180e-53 | -8.615850e-47 |
| Msa0866950 | Msa1403680 | 0.816220 | 6.187734e-52 | -8.615850e-47 |
| Msa0866950 | Msa1404300 | 0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0866950 | Msa1411020 | 0.824065 | 9.875534e-54 | -8.615850e-47 |
| Msa0866950 | Msa1412890 | 0.822711 | 2.046379e-53 | -8.615850e-47 |
| Msa0866950 | Msa1417150 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
| Msa0866950 | Msa1420490 | 0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa0866950 | Msa1423390 | 0.823772 | 1.157108e-53 | -8.615850e-47 |
| Msa0866950 | Msa1424290 | 0.816254 | 6.079633e-52 | -8.615850e-47 |
| Msa0866950 | Msa1424450 | 0.806035 | 1.000151e-49 | -8.615850e-47 |
| Msa0866950 | Msa1434350 | 0.820652 | 6.125137e-53 | -8.615850e-47 |
| Msa0866950 | Msa1439320 | 0.819493 | 1.128115e-52 | -8.615850e-47 |
| Msa0866950 | Msa1440370 | 0.818071 | 2.372774e-52 | -8.615850e-47 |
| Msa0866950 | Msa1440810 | 0.816599 | 5.089050e-52 | -8.615850e-47 |
| Msa0866950 | Msa1444740 | 0.860147 | 2.528766e-63 | -8.615850e-47 |
| Msa0866950 | Msa1460050 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866950 | MtrunA17_Chr3g0138941 | 91.341 | 358 | 8 | 2 | 1 | 335 | 1 | 358 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0866950 | AT5G10710.1 | 61.438 | 306 | 102 | 4 | 40 | 335 | 9 | 308 | 2.16e-135 | 387 |
| Msa0866950 | AT5G10710.3 | 56.863 | 306 | 102 | 5 | 40 | 335 | 9 | 294 | 1.63e-118 | 344 |
| Msa0866950 | AT5G10710.2 | 70.093 | 214 | 62 | 2 | 40 | 251 | 9 | 222 | 1.51e-109 | 319 |
Find 78 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCCATCATGTTGAAAAT+TGG | 0.207042 | 5_4:-69035425 | None:intergenic |
| AGACTTATAAAGGAACTTTA+TGG | 0.261283 | 5_4:+69035004 | Msa0866950:CDS |
| ACTTGGCTGACCGTATTTCT+AGG | 0.263651 | 5_4:+69031012 | Msa0866950:CDS |
| TATATAGTACCTAGCGAAAT+TGG | 0.269534 | 5_4:+69036092 | Msa0866950:three_prime_UTR |
| CCTAGCGAAATTGGTTATAT+AGG | 0.340894 | 5_4:+69036101 | Msa0866950:three_prime_UTR |
| GCTAGGTACTATATAACTTC+TGG | 0.356582 | 5_4:-69036084 | None:intergenic |
| TCTTGTACCATTTGTACAAC+AGG | 0.378391 | 5_4:+69036206 | Msa0866950:three_prime_UTR |
| CATGCAGGTCAGACTTATAA+AGG | 0.380694 | 5_4:+69034994 | Msa0866950:intron |
| AGACATAACTGAGTAAAGTT+TGG | 0.383686 | 5_4:+69030452 | Msa0866950:five_prime_UTR |
| GGAGCAGATAATTTGCTGTT+TGG | 0.394698 | 5_4:+69033828 | Msa0866950:intron |
| TTTGTAGAGATATATTTAGA+TGG | 0.404679 | 5_4:+69031788 | Msa0866950:intron |
| CAGAAATTCATTGATCATGT+TGG | 0.434843 | 5_4:+69034244 | Msa0866950:intron |
| TGTTTGGAAGGAGCAAGAAT+TGG | 0.441864 | 5_4:+69033844 | Msa0866950:CDS |
| TCGATACACAGATCTCATTT+CGG | 0.451039 | 5_4:+69035346 | Msa0866950:CDS |
| GAACTTTATGGAAATCAAAT+CGG | 0.451964 | 5_4:+69035016 | Msa0866950:CDS |
| TTGTAGAGATATATTTAGAT+GGG | 0.452805 | 5_4:+69031789 | Msa0866950:intron |
| ATGTATCCCTGTTGTACAAA+TGG | 0.455077 | 5_4:-69036213 | None:intergenic |
| TATTCCTTCAATATCCTCTC+TGG | 0.456149 | 5_4:+69036178 | Msa0866950:three_prime_UTR |
| GCTTAAAAGACATGAAAACT+TGG | 0.457621 | 5_4:+69030995 | Msa0866950:CDS |
| ATGATGGAAGATGGAATCTC+AGG | 0.459261 | 5_4:+69035437 | Msa0866950:CDS |
| GAAATTGGTTATATAGGTTG+AGG | 0.462124 | 5_4:+69036107 | Msa0866950:three_prime_UTR |
| CTTGTTGCGAGAGGGATAAT+CGG | 0.462940 | 5_4:-69030558 | None:intergenic |
| GTGATCTTGTCAGGTGCATA+TGG | 0.466433 | 5_4:+69031987 | Msa0866950:intron |
| GTAGAATTTATCTTCGACAT+TGG | 0.467570 | 5_4:-69035401 | None:intergenic |
| CAGATAATTTGCTGTTTGGA+AGG | 0.473656 | 5_4:+69033832 | Msa0866950:intron |
| TTCACCTTCTGGTAGACTCA+TGG | 0.476510 | 5_4:-69035510 | None:intergenic |
| CGCGATGCGATTCGTTGAAA+CGG | 0.476706 | 5_4:+69030478 | Msa0866950:exon |
| ATACGTGGATAGACGGGAAC+AGG | 0.478284 | 5_4:+69034282 | Msa0866950:CDS |
| CTCGAATCTCAGTGCTAGCC+TGG | 0.481978 | 5_4:+69035378 | Msa0866950:CDS |
| TCTTCTATGTCACTGAGTGT+TGG | 0.486474 | 5_4:-69030424 | None:intergenic |
| GAGAAAGTTACCTAGAAATA+CGG | 0.501508 | 5_4:-69031022 | None:intergenic |
| TAGGATAGTCGAACTGGTGC+AGG | 0.504799 | 5_4:-69035467 | None:intergenic |
| GGGATAATCGGCAGAGTGAA+AGG | 0.509209 | 5_4:-69030546 | None:intergenic |
| ACAAACTCGATCATGTGATA+AGG | 0.514790 | 5_4:-69035058 | None:intergenic |
| AGAATCTAAGACTGCAGAAA+GGG | 0.517798 | 5_4:-69036010 | None:intergenic |
| TCTGCGTAGGATAGTCGAAC+TGG | 0.518507 | 5_4:-69035473 | None:intergenic |
| GATGGGGAACAGTGGAATGA+TGG | 0.520649 | 5_4:+69031806 | Msa0866950:CDS |
| TGCAAGCATACGTGGATAGA+CGG | 0.523288 | 5_4:+69034275 | Msa0866950:CDS |
| TGACGTATTAACAAGCCATC+AGG | 0.529984 | 5_4:+69032041 | Msa0866950:CDS |
| ATTTATCTTCGACATTGGCC+AGG | 0.530939 | 5_4:-69035396 | None:intergenic |
| TAAGTTCATGTATGTAGCTA+CGG | 0.547209 | 5_4:+69030367 | Msa0866950:five_prime_UTR |
| TGGTAGACTCATGGTTCGTA+AGG | 0.549313 | 5_4:-69035501 | None:intergenic |
| GCAAGATGATGATAGTCGCT+TGG | 0.551967 | 5_4:+69030862 | Msa0866950:CDS |
| AAAATGGAACTGTGTGCTCA+AGG | 0.553374 | 5_4:-69034089 | None:intergenic |
| GAGAATCTAAGACTGCAGAA+AGG | 0.553556 | 5_4:-69036011 | None:intergenic |
| TGCAGAAAGGGCGAAGCTCT+AGG | 0.556381 | 5_4:-69035998 | None:intergenic |
| ACTTGCTACAATAAGAGAGC+AGG | 0.563333 | 5_4:+69031832 | Msa0866950:CDS |
| GCAAGCATACGTGGATAGAC+GGG | 0.564586 | 5_4:+69034276 | Msa0866950:CDS |
| TCCTTCAATATCCTCTCTGG+TGG | 0.566800 | 5_4:+69036181 | Msa0866950:three_prime_UTR |
| TATATCTGCTGAAGTGCTTG+TGG | 0.569777 | 5_4:-69035964 | None:intergenic |
| GCTAGCACTGAGATTCGAGT+TGG | 0.570019 | 5_4:-69035374 | None:intergenic |
| TCGTAAGGCGTCTTCTGCGT+AGG | 0.577738 | 5_4:-69035486 | None:intergenic |
| AACGAGGGAGCAATATATGT+TGG | 0.581685 | 5_4:-69036156 | None:intergenic |
| TGTAGAGATATATTTAGATG+GGG | 0.590530 | 5_4:+69031790 | Msa0866950:intron |
| CCTATATAACCAATTTCGCT+AGG | 0.591483 | 5_4:-69036101 | None:intergenic |
| TATATTTAGATGGGGAACAG+TGG | 0.594269 | 5_4:+69031798 | Msa0866950:CDS |
| AGGATATTGAAGGAATAACG+AGG | 0.594872 | 5_4:-69036172 | None:intergenic |
| TCTTCTTTCATCCAATGCAA+TGG | 0.597510 | 5_4:+69034140 | Msa0866950:CDS |
| GAAGGGACCTTGTTGCGAGA+GGG | 0.597833 | 5_4:-69030566 | None:intergenic |
| ATTACAGGTATATAGAATTG+TGG | 0.598252 | 5_4:-69036279 | None:intergenic |
| CGATTATCCCTCTCGCAACA+AGG | 0.599074 | 5_4:+69030559 | Msa0866950:CDS |
| ACCACCAGAGAGGATATTGA+AGG | 0.599427 | 5_4:-69036182 | None:intergenic |
| AGATCTATTGCAAGCATACG+TGG | 0.604226 | 5_4:+69034267 | Msa0866950:CDS |
| AAATGAGATCTGTGTATCGA+AGG | 0.604667 | 5_4:-69035343 | None:intergenic |
| AATTAACAGGGATTCTGACA+AGG | 0.606528 | 5_4:+69031104 | Msa0866950:intron |
| AGAAGGGACCTTGTTGCGAG+AGG | 0.608665 | 5_4:-69030567 | None:intergenic |
| CTTGTACCATTTGTACAACA+GGG | 0.614869 | 5_4:+69036207 | Msa0866950:three_prime_UTR |
| GGATATTGAAGGAATAACGA+GGG | 0.617938 | 5_4:-69036171 | None:intergenic |
| CAGAGTGAAAGGAATTACTT+CGG | 0.620744 | 5_4:-69030535 | None:intergenic |
| TACATATAAAACTGGAAACA+AGG | 0.626563 | 5_4:+69032071 | Msa0866950:CDS |
| ACTCGATCATGTGATAAGGA+AGG | 0.628301 | 5_4:-69035054 | None:intergenic |
| CGTTGAAACGGAGAGCGATG+CGG | 0.630811 | 5_4:+69030490 | Msa0866950:CDS |
| CAAGACTCGATGATTAACGA+TGG | 0.662411 | 5_4:-69030274 | None:intergenic |
| GCACGAGCTTCTCAAACACA+AGG | 0.674546 | 5_4:+69031162 | Msa0866950:CDS |
| ATCTTGTCAGGTGCATATGG+AGG | 0.680322 | 5_4:+69031990 | Msa0866950:intron |
| ACTTACTCTCCAGCACGCAG+TGG | 0.705433 | 5_4:-69034044 | None:intergenic |
| CGAACCATGAGTCTACCAGA+AGG | 0.717534 | 5_4:+69035506 | Msa0866950:CDS |
| GGTACAAGACACCACCAGAG+AGG | 0.725071 | 5_4:-69036192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATTTGAAAAATAGAA+AGG | - | chr5_4:69031226-69031245 | None:intergenic | 10.0% |
| !!! | AATAGTTTTGATTTTATTAT+AGG | + | chr5_4:69032623-69032642 | Msa0866950:intron | 10.0% |
| !! | AATTAAAATGAAAAAGATAA+TGG | - | chr5_4:69032930-69032949 | None:intergenic | 10.0% |
| !! | TTAAGGAAATAATAAAATAT+TGG | + | chr5_4:69033373-69033392 | Msa0866950:intron | 10.0% |
| !! | TTATATATATTGTTTGTATC+AGG | - | chr5_4:69030945-69030964 | None:intergenic | 15.0% |
| !!! | ATTTCTTCTTTTTAATTAAC+AGG | + | chr5_4:69031091-69031110 | Msa0866950:intron | 15.0% |
| !!! | TTTCTTCTTTTTAATTAACA+GGG | + | chr5_4:69031092-69031111 | Msa0866950:intron | 15.0% |
| !! | AATAAAATTGACATCAAATT+TGG | + | chr5_4:69031320-69031339 | Msa0866950:intron | 15.0% |
| !!! | ATATCTTTTCATTTATTTCT+AGG | + | chr5_4:69034003-69034022 | Msa0866950:intron | 15.0% |
| !!! | TGATTATGTTTCTTTTATTT+TGG | + | chr5_4:69034792-69034811 | Msa0866950:intron | 15.0% |
| !! | TAATAACAACAATAAACCTA+TGG | - | chr5_4:69030668-69030687 | None:intergenic | 20.0% |
| !!! | TCTATTATTTTAATCACAGT+TGG | + | chr5_4:69030966-69030985 | Msa0866950:intron | 20.0% |
| !! | AACATATTAACAATTAGTGA+AGG | - | chr5_4:69031047-69031066 | None:intergenic | 20.0% |
| !! | ATAAAAATAGTGCAACATTA+AGG | - | chr5_4:69031473-69031492 | None:intergenic | 20.0% |
| !! | ATATCTCTACAAAAAAAAAG+AGG | - | chr5_4:69031781-69031800 | None:intergenic | 20.0% |
| !! | TTTGTAGAGATATATTTAGA+TGG | + | chr5_4:69031788-69031807 | Msa0866950:intron | 20.0% |
| !! | TTGTAGAGATATATTTAGAT+GGG | + | chr5_4:69031789-69031808 | Msa0866950:intron | 20.0% |
| !! | GAAAAAGTTACATATAAAAC+TGG | + | chr5_4:69032063-69032082 | Msa0866950:CDS | 20.0% |
| !! | TTATGTACCTATAAAAAACA+CGG | + | chr5_4:69032188-69032207 | Msa0866950:intron | 20.0% |
| !! | TATCAAAAAGATATCAAGTT+GGG | - | chr5_4:69032711-69032730 | None:intergenic | 20.0% |
| !! | TTATCAAAAAGATATCAAGT+TGG | - | chr5_4:69032712-69032731 | None:intergenic | 20.0% |
| !!! | AACTTGATATCTTTTTGATA+AGG | + | chr5_4:69032711-69032730 | Msa0866950:intron | 20.0% |
| !! | AATAATAAAATATTGGTGTG+TGG | + | chr5_4:69033380-69033399 | Msa0866950:intron | 20.0% |
| !! | GTTTGAATTGAATACAAAAT+AGG | + | chr5_4:69033616-69033635 | Msa0866950:intron | 20.0% |
| !! | TCTATTTCACTAAGTAAATA+TGG | - | chr5_4:69034508-69034527 | None:intergenic | 20.0% |
| !! | GACAATTGTTTAGAAAAAAT+GGG | - | chr5_4:69034650-69034669 | None:intergenic | 20.0% |
| !! | TGACAATTGTTTAGAAAAAA+TGG | - | chr5_4:69034651-69034670 | None:intergenic | 20.0% |
| !! | TTGGTATGTAAAATATTAGA+TGG | + | chr5_4:69034758-69034777 | Msa0866950:intron | 20.0% |
| !! | TAACATAGAATAGAATGTTT+AGG | - | chr5_4:69034854-69034873 | None:intergenic | 20.0% |
| !! | AACATTCTATTCTATGTTAA+AGG | + | chr5_4:69034855-69034874 | Msa0866950:intron | 20.0% |
| !!! | ATAATTAATATTGGCTATGA+GGG | + | chr5_4:69035703-69035722 | Msa0866950:intron | 20.0% |
| !!! | ATAAAAAAAGAACTTGCTAA+AGG | - | chr5_4:69035799-69035818 | None:intergenic | 20.0% |
| ! | TAGTGAAATTGATACGATTA+GGG | - | chr5_4:69030645-69030664 | None:intergenic | 25.0% |
| ! | TATTGTTTGTATCAGGAAAA+TGG | - | chr5_4:69030938-69030957 | None:intergenic | 25.0% |
| ! | AAAAATAGAAAGGATAAGAG+AGG | - | chr5_4:69031216-69031235 | None:intergenic | 25.0% |
| !!! | ATGTTGCACTATTTTTATAC+CGG | + | chr5_4:69031475-69031494 | Msa0866950:intron | 25.0% |
| !!! | TAACAGCAATATTTTTTGCA+TGG | + | chr5_4:69031572-69031591 | Msa0866950:intron | 25.0% |
| ! | GATTCTTAAGATGTAAATCT+TGG | + | chr5_4:69031658-69031677 | Msa0866950:intron | 25.0% |
| ! | TGTAGAGATATATTTAGATG+GGG | + | chr5_4:69031790-69031809 | Msa0866950:intron | 25.0% |
| ! | ATACCAGAACATAAGTAAAA+AGG | - | chr5_4:69031881-69031900 | None:intergenic | 25.0% |
| !!! | TATATGTAACTTTTTCCTGA+TGG | - | chr5_4:69032059-69032078 | None:intergenic | 25.0% |
| ! | TACATATAAAACTGGAAACA+AGG | + | chr5_4:69032071-69032090 | Msa0866950:CDS | 25.0% |
| ! | TTACCATGAAAAGTTATTCA+GGG | - | chr5_4:69032119-69032138 | None:intergenic | 25.0% |
| ! | TTTACCATGAAAAGTTATTC+AGG | - | chr5_4:69032120-69032139 | None:intergenic | 25.0% |
| ! | TATGTACCTATAAAAAACAC+GGG | + | chr5_4:69032189-69032208 | Msa0866950:intron | 25.0% |
| !! | TGGTTTTTGATAGAAAACTA+TGG | - | chr5_4:69032559-69032578 | None:intergenic | 25.0% |
| !!! | CATCTTTTAAAATACAACAG+TGG | + | chr5_4:69032667-69032686 | Msa0866950:intron | 25.0% |
| !! | AAATGAAAAAGATAATGGCT+CGG | - | chr5_4:69032925-69032944 | None:intergenic | 25.0% |
| !!! | AGCAGTGTTTTTTTTTTCTT+CGG | + | chr5_4:69033262-69033281 | Msa0866950:intron | 25.0% |
| !!! | GGAAACCAATGATTTTTTTT+GGG | - | chr5_4:69033722-69033741 | None:intergenic | 25.0% |
| ! | AGTTATATATGATGTTGTCA+TGG | + | chr5_4:69034170-69034189 | Msa0866950:intron | 25.0% |
| ! | GAAAAATGTTCAAATACACA+TGG | - | chr5_4:69034197-69034216 | None:intergenic | 25.0% |
| !! | TGTTGAATATGTTCATTTTG+CGG | + | chr5_4:69034336-69034355 | Msa0866950:intron | 25.0% |
| ! | TCTGAGAATTTAAACTAACA+AGG | - | chr5_4:69034578-69034597 | None:intergenic | 25.0% |
| ! | AATTGTCAAAACATGTATTC+TGG | + | chr5_4:69034663-69034682 | Msa0866950:intron | 25.0% |
| ! | ATTGTCAAAACATGTATTCT+GGG | + | chr5_4:69034664-69034683 | Msa0866950:intron | 25.0% |
| ! | AGTTTAATATCTTCCACAAT+TGG | - | chr5_4:69034722-69034741 | None:intergenic | 25.0% |
| ! | ATTGTGGAAGATATTAAACT+TGG | + | chr5_4:69034722-69034741 | Msa0866950:intron | 25.0% |
| ! | TTCTATTCTATGTTAAAGGT+TGG | + | chr5_4:69034859-69034878 | Msa0866950:intron | 25.0% |
| ! | TCTATTCTATGTTAAAGGTT+GGG | + | chr5_4:69034860-69034879 | Msa0866950:intron | 25.0% |
| ! | AGACTTATAAAGGAACTTTA+TGG | + | chr5_4:69035004-69035023 | Msa0866950:CDS | 25.0% |
| ! | GAACTTTATGGAAATCAAAT+CGG | + | chr5_4:69035016-69035035 | Msa0866950:CDS | 25.0% |
| !!! | TTGTATTAGATGATTTTGAC+TGG | + | chr5_4:69035077-69035096 | Msa0866950:intron | 25.0% |
| ! | TTTGAAAACAAGGAAAATGT+AGG | - | chr5_4:69035264-69035283 | None:intergenic | 25.0% |
| ! | TATTACAAGGTTTGAAAACA+AGG | - | chr5_4:69035274-69035293 | None:intergenic | 25.0% |
| ! | ACTTCTTGATCAATATTACA+AGG | - | chr5_4:69035287-69035306 | None:intergenic | 25.0% |
| ! | AGGTGAAAACTATATTACTT+CGG | + | chr5_4:69035526-69035545 | Msa0866950:intron | 25.0% |
| ! | ACTTAAATGAAATTAGACTC+TGG | + | chr5_4:69035635-69035654 | Msa0866950:intron | 25.0% |
| ! | AGTGTCCTCATAATTAATAT+TGG | + | chr5_4:69035694-69035713 | Msa0866950:intron | 25.0% |
| ! | CATAGCCAATATTAATTATG+AGG | - | chr5_4:69035702-69035721 | None:intergenic | 25.0% |
| !! | CATAATTAATATTGGCTATG+AGG | + | chr5_4:69035702-69035721 | Msa0866950:intron | 25.0% |
| TAAGTTCATGTATGTAGCTA+CGG | + | chr5_4:69030367-69030386 | Msa0866950:five_prime_UTR | 30.0% | |
| AGACATAACTGAGTAAAGTT+TGG | + | chr5_4:69030452-69030471 | Msa0866950:five_prime_UTR | 30.0% | |
| GTAGTGAAATTGATACGATT+AGG | - | chr5_4:69030646-69030665 | None:intergenic | 30.0% | |
| GCTTAAAAGACATGAAAACT+TGG | + | chr5_4:69030995-69031014 | Msa0866950:CDS | 30.0% | |
| GAGAAAGTTACCTAGAAATA+CGG | - | chr5_4:69031025-69031044 | None:intergenic | 30.0% | |
| GATATAAATGAGTAGGTAAC+AGG | - | chr5_4:69031194-69031213 | None:intergenic | 30.0% | |
| AAGAGAGGATATAAATGAGT+AGG | - | chr5_4:69031201-69031220 | None:intergenic | 30.0% | |
| GAAACTGATATCACTTTGTA+TGG | - | chr5_4:69031293-69031312 | None:intergenic | 30.0% | |
| ATTGACATCAAATTTGGACT+TGG | + | chr5_4:69031326-69031345 | Msa0866950:intron | 30.0% | |
| !! | AGTTGTTTTCTATGCTTTAC+AGG | - | chr5_4:69031367-69031386 | None:intergenic | 30.0% |
| !! | TCTAAAACATTTTAACAGCG+TGG | + | chr5_4:69031636-69031655 | Msa0866950:intron | 30.0% |
| AATGAATGAACAGTAGAAGT+TGG | - | chr5_4:69031726-69031745 | None:intergenic | 30.0% | |
| !!! | CATTTTTCAGGATATCTCTA+AGG | - | chr5_4:69031750-69031769 | None:intergenic | 30.0% |
| ! | CTTCCTTTTTACTTATGTTC+TGG | + | chr5_4:69031875-69031894 | Msa0866950:intron | 30.0% |
| GATTACTATGAAGAACATCA+AGG | - | chr5_4:69031908-69031927 | None:intergenic | 30.0% | |
| GCTTGCATATTTAAGTCATT+TGG | + | chr5_4:69032148-69032167 | Msa0866950:intron | 30.0% | |
| !!! | ATCTTACCCGTGTTTTTTAT+AGG | - | chr5_4:69032198-69032217 | None:intergenic | 30.0% |
| ATTGAGAATGTGAAAAGAGT+AGG | + | chr5_4:69032323-69032342 | Msa0866950:intron | 30.0% | |
| TCGCTCTACTATAAAGTTTA+GGG | - | chr5_4:69032371-69032390 | None:intergenic | 30.0% | |
| TTCGCTCTACTATAAAGTTT+AGG | - | chr5_4:69032372-69032391 | None:intergenic | 30.0% | |
| !!! | ACAAGGTAAAGTTTTGAGTA+TGG | + | chr5_4:69032443-69032462 | Msa0866950:intron | 30.0% |
| !!! | CAAGGTAAAGTTTTGAGTAT+GGG | + | chr5_4:69032444-69032463 | Msa0866950:intron | 30.0% |
| !!! | AAGGTAAAGTTTTGAGTATG+GGG | + | chr5_4:69032445-69032464 | Msa0866950:intron | 30.0% |
| ! | TTTTCTATCAAAAACCAACG+AGG | + | chr5_4:69032562-69032581 | Msa0866950:intron | 30.0% |
| ! | GTCTAAAATATTTGTACCCT+CGG | - | chr5_4:69032597-69032616 | None:intergenic | 30.0% |
| GAGAGTTGAGAATACATAAA+TGG | + | chr5_4:69033014-69033033 | Msa0866950:intron | 30.0% | |
| CATAAATGGTAAGTGAGATA+TGG | + | chr5_4:69033028-69033047 | Msa0866950:intron | 30.0% | |
| ACATACAAATTCCACTAAGT+AGG | + | chr5_4:69033066-69033085 | Msa0866950:intron | 30.0% | |
| ACATACAAATCATAGCTTGA+AGG | + | chr5_4:69033136-69033155 | Msa0866950:intron | 30.0% | |
| TACTTACAATATGAGACTTG+AGG | - | chr5_4:69033182-69033201 | None:intergenic | 30.0% | |
| CTTGGATCGTCAAATTTATT+TGG | - | chr5_4:69033348-69033367 | None:intergenic | 30.0% | |
| ATTATTTCCTTAACACTGCT+TGG | - | chr5_4:69033366-69033385 | None:intergenic | 30.0% | |
| TAGATTTAATAGGCATCCTA+TGG | + | chr5_4:69033447-69033466 | Msa0866950:intron | 30.0% | |
| ! | TGATTTTTACCTCTAGCTAT+TGG | - | chr5_4:69033548-69033567 | None:intergenic | 30.0% |
| !! | GAATACAAAATAGGTACTGA+TGG | + | chr5_4:69033625-69033644 | Msa0866950:intron | 30.0% |
| !!! | ACCAATGATTTTTTTTGGGA+GGG | - | chr5_4:69033718-69033737 | None:intergenic | 30.0% |
| !!! | AACCAATGATTTTTTTTGGG+AGG | - | chr5_4:69033719-69033738 | None:intergenic | 30.0% |
| !!! | CGGAAACCAATGATTTTTTT+TGG | - | chr5_4:69033723-69033742 | None:intergenic | 30.0% |
| TAGTTTATGAGCTGACATTA+TGG | + | chr5_4:69033929-69033948 | Msa0866950:intron | 30.0% | |
| AGATATAATCGTCAGCAAAT+GGG | - | chr5_4:69033989-69034008 | None:intergenic | 30.0% | |
| AAGATATAATCGTCAGCAAA+TGG | - | chr5_4:69033990-69034009 | None:intergenic | 30.0% | |
| ! | TCATTTTCTGTTTCACGTAT+TGG | - | chr5_4:69034120-69034139 | None:intergenic | 30.0% |
| !! | AACTGATTTTACCATTGCAT+TGG | - | chr5_4:69034154-69034173 | None:intergenic | 30.0% |
| CAGAAATTCATTGATCATGT+TGG | + | chr5_4:69034244-69034263 | Msa0866950:intron | 30.0% | |
| ! | TCTCTAAAGATTACATGCAT+AGG | - | chr5_4:69034315-69034334 | None:intergenic | 30.0% |
| ! | TTTTGCGGAATACTGATATT+AGG | + | chr5_4:69034351-69034370 | Msa0866950:intron | 30.0% |
| CATGTTAAAGCTAGTATCTT+TGG | + | chr5_4:69034466-69034485 | Msa0866950:intron | 30.0% | |
| AACACTATCTACTGATAAGT+CGG | + | chr5_4:69034597-69034616 | Msa0866950:intron | 30.0% | |
| !! | AGAATGTTTAGGCTTTGTTT+GGG | - | chr5_4:69034843-69034862 | None:intergenic | 30.0% |
| !! | TAGAATGTTTAGGCTTTGTT+TGG | - | chr5_4:69034844-69034863 | None:intergenic | 30.0% |
| CTATTCTATGTTAAAGGTTG+GGG | + | chr5_4:69034861-69034880 | Msa0866950:intron | 30.0% | |
| TACAAGCATACATGAAAAGA+GGG | - | chr5_4:69034910-69034929 | None:intergenic | 30.0% | |
| TTACAAGCATACATGAAAAG+AGG | - | chr5_4:69034911-69034930 | None:intergenic | 30.0% | |
| GTAGAATTTATCTTCGACAT+TGG | - | chr5_4:69035404-69035423 | None:intergenic | 30.0% | |
| ! | TACTCCAATTTTCAACATGA+TGG | + | chr5_4:69035421-69035440 | Msa0866950:CDS | 30.0% |
| TCTTCCATCATGTTGAAAAT+TGG | - | chr5_4:69035428-69035447 | None:intergenic | 30.0% | |
| !! | ATTTTCAACATGATGGAAGA+TGG | + | chr5_4:69035428-69035447 | Msa0866950:CDS | 30.0% |
| ! | GTAATATAGTTTTCACCTTC+TGG | - | chr5_4:69035524-69035543 | None:intergenic | 30.0% |
| !!! | AGAGAACGATGTCTTATTTT+CGG | + | chr5_4:69035559-69035578 | Msa0866950:intron | 30.0% |
| AAGTCTGATATGTGTCTTTA+TGG | + | chr5_4:69035858-69035877 | Msa0866950:intron | 30.0% | |
| TATATAGTACCTAGCGAAAT+TGG | + | chr5_4:69036092-69036111 | Msa0866950:three_prime_UTR | 30.0% | |
| GAAATTGGTTATATAGGTTG+AGG | + | chr5_4:69036107-69036126 | Msa0866950:three_prime_UTR | 30.0% | |
| CAGAGTGAAAGGAATTACTT+CGG | - | chr5_4:69030538-69030557 | None:intergenic | 35.0% | |
| ! | AGGGTTTTTATGCAATTCGA+TGG | - | chr5_4:69030626-69030645 | None:intergenic | 35.0% |
| CGTATCAATTTCACTACCAT+AGG | + | chr5_4:69030649-69030668 | Msa0866950:intron | 35.0% | |
| AGTTTGAACAATATGCTGGA+CGG | + | chr5_4:69030719-69030738 | Msa0866950:intron | 35.0% | |
| AATTAACAGGGATTCTGACA+AGG | + | chr5_4:69031104-69031123 | Msa0866950:intron | 35.0% | |
| TATACCGGCAATAATTGAAC+TGG | + | chr5_4:69031490-69031509 | Msa0866950:intron | 35.0% | |
| !!! | GAGGTTTAGAAGCATTTTTC+AGG | - | chr5_4:69031762-69031781 | None:intergenic | 35.0% |
| TATATTTAGATGGGGAACAG+TGG | + | chr5_4:69031798-69031817 | Msa0866950:CDS | 35.0% | |
| TGACAAGATCACAGTTGAAT+GGG | - | chr5_4:69031979-69031998 | None:intergenic | 35.0% | |
| ! | CATCCCTGAATAACTTTTCA+TGG | + | chr5_4:69032113-69032132 | Msa0866950:intron | 35.0% |
| ACGCTAAAGAACTAAACACA+TGG | + | chr5_4:69032221-69032240 | Msa0866950:intron | 35.0% | |
| ATGTGAAAAGAGTAGGAGAT+AGG | + | chr5_4:69032330-69032349 | Msa0866950:intron | 35.0% | |
| AAGAGTAGGAGATAGGATAT+TGG | + | chr5_4:69032337-69032356 | Msa0866950:intron | 35.0% | |
| AGAGTAGGAGATAGGATATT+GGG | + | chr5_4:69032338-69032357 | Msa0866950:intron | 35.0% | |
| CGCTCTACTATAAAGTTTAG+GGG | - | chr5_4:69032370-69032389 | None:intergenic | 35.0% | |
| TGTGATGTTACCAATGCATA+TGG | + | chr5_4:69032397-69032416 | Msa0866950:intron | 35.0% | |
| !!! | AGGTAAAGTTTTGAGTATGG+GGG | + | chr5_4:69032446-69032465 | Msa0866950:intron | 35.0% |
| TAGGTAACACTAAAAACGAG+AGG | + | chr5_4:69032642-69032661 | Msa0866950:intron | 35.0% | |
| !! | AAGATATCAAGTTGGGACTT+GGG | - | chr5_4:69032704-69032723 | None:intergenic | 35.0% |
| !! | AAAGATATCAAGTTGGGACT+TGG | - | chr5_4:69032705-69032724 | None:intergenic | 35.0% |
| AATAGTCAAGTCAGAAATCC+TGG | + | chr5_4:69032842-69032861 | Msa0866950:intron | 35.0% | |
| ATAGTCAAGTCAGAAATCCT+GGG | + | chr5_4:69032843-69032862 | Msa0866950:intron | 35.0% | |
| AAATCCTGGGATAAGATGAT+GGG | + | chr5_4:69032856-69032875 | Msa0866950:intron | 35.0% | |
| TTTGTGCACACTAGAGTTAT+GGG | - | chr5_4:69032893-69032912 | None:intergenic | 35.0% | |
| ! | TTTTGTGCACACTAGAGTTA+TGG | - | chr5_4:69032894-69032913 | None:intergenic | 35.0% |
| ATAACTCTAGTGTGCACAAA+AGG | + | chr5_4:69032893-69032912 | Msa0866950:intron | 35.0% | |
| TACCTAAATAACATGCACCA+AGG | - | chr5_4:69032994-69033013 | None:intergenic | 35.0% | |
| CATAGCTTGAAGGTTGAAAT+TGG | + | chr5_4:69033146-69033165 | Msa0866950:intron | 35.0% | |
| !! | CTTGTTGTCACTTTGTATGA+TGG | - | chr5_4:69033213-69033232 | None:intergenic | 35.0% |
| ACAAAGTGACAACAAGATAG+AGG | + | chr5_4:69033217-69033236 | Msa0866950:intron | 35.0% | |
| CAAAGTGACAACAAGATAGA+GGG | + | chr5_4:69033218-69033237 | Msa0866950:intron | 35.0% | |
| TAGAGGGAGATGTAAATTAC+AGG | + | chr5_4:69033234-69033253 | Msa0866950:intron | 35.0% | |
| ! | TGTTGATTGGTATAACCACT+CGG | + | chr5_4:69033322-69033341 | Msa0866950:intron | 35.0% |
| GGACACATGGTAGATTTAAT+AGG | + | chr5_4:69033437-69033456 | Msa0866950:intron | 35.0% | |
| !! | GTTAACAAAATGGTGGATAC+TGG | + | chr5_4:69033517-69033536 | Msa0866950:intron | 35.0% |
| ! | CTAAATCTCACTTGATGGTT+TGG | - | chr5_4:69033585-69033604 | None:intergenic | 35.0% |
| AACCATCAAGTGAGATTTAG+AGG | + | chr5_4:69033585-69033604 | Msa0866950:intron | 35.0% | |
| TACCTCTAAATCTCACTTGA+TGG | - | chr5_4:69033590-69033609 | None:intergenic | 35.0% | |
| TGAACCCACTTAATGGAATA+AGG | + | chr5_4:69033668-69033687 | Msa0866950:intron | 35.0% | |
| !! | CAAGCCTTATTCCATTAAGT+GGG | - | chr5_4:69033675-69033694 | None:intergenic | 35.0% |
| !!! | CCAATGATTTTTTTTGGGAG+GGG | - | chr5_4:69033717-69033736 | None:intergenic | 35.0% |
| ! | AGTATAGCATTGAACGTGTA+CGG | - | chr5_4:69033743-69033762 | None:intergenic | 35.0% |
| TACACGTTCAATGCTATACT+TGG | + | chr5_4:69033743-69033762 | Msa0866950:intron | 35.0% | |
| !! | CAGATAATTTGCTGTTTGGA+AGG | + | chr5_4:69033832-69033851 | Msa0866950:intron | 35.0% |
| ! | GACATCTTTTGCTGGTAATT+TGG | + | chr5_4:69033879-69033898 | Msa0866950:intron | 35.0% |
| TTTATGAGCTGACATTATGG+AGG | + | chr5_4:69033932-69033951 | Msa0866950:intron | 35.0% | |
| ! | TCACGTATTGGCAAGAAAAA+TGG | - | chr5_4:69034108-69034127 | None:intergenic | 35.0% |
| TCTTCTTTCATCCAATGCAA+TGG | + | chr5_4:69034140-69034159 | Msa0866950:CDS | 35.0% | |
| TTTCTAAGCCTTGCTTCTAT+TGG | + | chr5_4:69034213-69034232 | Msa0866950:intron | 35.0% | |
| AATGCAAACCAATAGAAGCA+AGG | - | chr5_4:69034224-69034243 | None:intergenic | 35.0% | |
| TTAGGTCATCATGATCCTTA+TGG | + | chr5_4:69034369-69034388 | Msa0866950:intron | 35.0% | |
| ATGCAACATACATGTCCATA+AGG | - | chr5_4:69034387-69034406 | None:intergenic | 35.0% | |
| ATGGACATGTATGTTGCATA+CGG | + | chr5_4:69034388-69034407 | Msa0866950:intron | 35.0% | |
| CACTAAGTAAATATGGCTAC+AGG | - | chr5_4:69034501-69034520 | None:intergenic | 35.0% | |
| ACTAACAAGGATATGAGTTG+TGG | - | chr5_4:69034565-69034584 | None:intergenic | 35.0% | |
| ! | CCACAATTGGTGTTCTTAAA+TGG | - | chr5_4:69034709-69034728 | None:intergenic | 35.0% |
| CCATTTAAGAACACCAATTG+TGG | + | chr5_4:69034706-69034725 | Msa0866950:intron | 35.0% | |
| !! | ACTTGGTGTCTTAGTTATCT+TGG | + | chr5_4:69034739-69034758 | Msa0866950:intron | 35.0% |
| ACAAACTCGATCATGTGATA+AGG | - | chr5_4:69035061-69035080 | None:intergenic | 35.0% | |
| !!! | AGATGATTTTGACTGGTTAG+TGG | + | chr5_4:69035084-69035103 | Msa0866950:intron | 35.0% |
| !!! | GATGATTTTGACTGGTTAGT+GGG | + | chr5_4:69035085-69035104 | Msa0866950:intron | 35.0% |
| AGGGGGAAGAAAATTTGAAA+AGG | - | chr5_4:69035153-69035172 | None:intergenic | 35.0% | |
| TCCCGTGTTAACATTTGAAA+GGG | - | chr5_4:69035172-69035191 | None:intergenic | 35.0% | |
| TTCCCGTGTTAACATTTGAA+AGG | - | chr5_4:69035173-69035192 | None:intergenic | 35.0% | |
| ATGTTAACACGGGAAATCAT+TGG | + | chr5_4:69035178-69035197 | Msa0866950:intron | 35.0% | |
| AAATGAGATCTGTGTATCGA+AGG | - | chr5_4:69035346-69035365 | None:intergenic | 35.0% | |
| TCGATACACAGATCTCATTT+CGG | + | chr5_4:69035346-69035365 | Msa0866950:CDS | 35.0% | |
| ! | AGCATTTGCTGAAAAGTGAA+AGG | - | chr5_4:69035670-69035689 | None:intergenic | 35.0% |
| TATCAGACTTAAGTGTGCAT+GGG | - | chr5_4:69035848-69035867 | None:intergenic | 35.0% | |
| ATATCAGACTTAAGTGTGCA+TGG | - | chr5_4:69035849-69035868 | None:intergenic | 35.0% | |
| ! | AGAGCGAGATAACTTTGAAA+TGG | - | chr5_4:69035886-69035905 | None:intergenic | 35.0% |
| ! | AGAATCTAAGACTGCAGAAA+GGG | - | chr5_4:69036013-69036032 | None:intergenic | 35.0% |
| GCTAGGTACTATATAACTTC+TGG | - | chr5_4:69036087-69036106 | None:intergenic | 35.0% | |
| CCTATATAACCAATTTCGCT+AGG | - | chr5_4:69036104-69036123 | None:intergenic | 35.0% | |
| CCTAGCGAAATTGGTTATAT+AGG | + | chr5_4:69036101-69036120 | Msa0866950:three_prime_UTR | 35.0% | |
| GGATATTGAAGGAATAACGA+GGG | - | chr5_4:69036174-69036193 | None:intergenic | 35.0% | |
| AGGATATTGAAGGAATAACG+AGG | - | chr5_4:69036175-69036194 | None:intergenic | 35.0% | |
| TATTCCTTCAATATCCTCTC+TGG | + | chr5_4:69036178-69036197 | Msa0866950:three_prime_UTR | 35.0% | |
| TCTTGTACCATTTGTACAAC+AGG | + | chr5_4:69036206-69036225 | Msa0866950:three_prime_UTR | 35.0% | |
| CTTGTACCATTTGTACAACA+GGG | + | chr5_4:69036207-69036226 | Msa0866950:three_prime_UTR | 35.0% | |
| ATGTATCCCTGTTGTACAAA+TGG | - | chr5_4:69036216-69036235 | None:intergenic | 35.0% | |
| CAAGACTCGATGATTAACGA+TGG | - | chr5_4:69030277-69030296 | None:intergenic | 40.0% | |
| TCTTCTATGTCACTGAGTGT+TGG | - | chr5_4:69030427-69030446 | None:intergenic | 40.0% | |
| CAGAGAAGAGAAGAGAAGAA+GGG | - | chr5_4:69030586-69030605 | None:intergenic | 40.0% | |
| TCAGAGAAGAGAAGAGAAGA+AGG | - | chr5_4:69030587-69030606 | None:intergenic | 40.0% | |
| CCAGCATATTGTTCAAACTG+CGG | - | chr5_4:69030718-69030737 | None:intergenic | 40.0% | |
| ! | CTTCAGTGCCTTGTGTTATT+TGG | + | chr5_4:69031400-69031419 | Msa0866950:intron | 40.0% |
| AGGCTACACCAAATAACACA+AGG | - | chr5_4:69031411-69031430 | None:intergenic | 40.0% | |
| !! | TTGTGTTATTTGGTGTAGCC+TGG | + | chr5_4:69031410-69031429 | Msa0866950:intron | 40.0% |
| AACCAATAGATGACTAAGCC+AGG | - | chr5_4:69031431-69031450 | None:intergenic | 40.0% | |
| ! | ACTTGCTACAATAAGAGAGC+AGG | + | chr5_4:69031832-69031851 | Msa0866950:CDS | 40.0% |
| CTACAATAAGAGAGCAGGTA+TGG | + | chr5_4:69031837-69031856 | Msa0866950:intron | 40.0% | |
| CTGACAAGATCACAGTTGAA+TGG | - | chr5_4:69031980-69031999 | None:intergenic | 40.0% | |
| CATTCAACTGTGATCTTGTC+AGG | + | chr5_4:69031978-69031997 | Msa0866950:intron | 40.0% | |
| TGACGTATTAACAAGCCATC+AGG | + | chr5_4:69032041-69032060 | Msa0866950:CDS | 40.0% | |
| ACCAATGCATATGGACAAGT+AGG | + | chr5_4:69032406-69032425 | Msa0866950:intron | 40.0% | |
| CCAATGCATATGGACAAGTA+GGG | + | chr5_4:69032407-69032426 | Msa0866950:intron | 40.0% | |
| AGGGAATGAAGAGCAATACA+AGG | + | chr5_4:69032426-69032445 | Msa0866950:intron | 40.0% | |
| !!! | GGTAAAGTTTTGAGTATGGG+GGG | + | chr5_4:69032447-69032466 | Msa0866950:intron | 40.0% |
| AACGAGGATATAAACACCGA+GGG | + | chr5_4:69032578-69032597 | Msa0866950:intron | 40.0% | |
| GAAATCCTGGGATAAGATGA+TGG | + | chr5_4:69032855-69032874 | Msa0866950:intron | 40.0% | |
| AAAACCCATCATCTTATCCC+AGG | - | chr5_4:69032863-69032882 | None:intergenic | 40.0% | |
| TTGTGCACACTAGAGTTATG+GGG | - | chr5_4:69032892-69032911 | None:intergenic | 40.0% | |
| ! | TGCCTTGGTGCATGTTATTT+AGG | + | chr5_4:69032989-69033008 | Msa0866950:intron | 40.0% |
| TCTCTTACAGTCCTACTTAG+TGG | - | chr5_4:69033080-69033099 | None:intergenic | 40.0% | |
| GGACTGTAAGAGACAACAAT+TGG | + | chr5_4:69033087-69033106 | Msa0866950:intron | 40.0% | |
| GTCAAATTTATTTGGCCGAG+TGG | - | chr5_4:69033340-69033359 | None:intergenic | 40.0% | |
| CTATGGTAGCAGACATTGAT+GGG | + | chr5_4:69033464-69033483 | Msa0866950:intron | 40.0% | |
| ! | ACCATTTTGTTAACCCTCCT+TGG | - | chr5_4:69033511-69033530 | None:intergenic | 40.0% |
| AAGGAGGGTTAACAAAATGG+TGG | + | chr5_4:69033510-69033529 | Msa0866950:intron | 40.0% | |
| !! | ACAAAATGGTGGATACTGGA+TGG | + | chr5_4:69033521-69033540 | Msa0866950:intron | 40.0% |
| ATATCGCTGAACCCACTTAA+TGG | + | chr5_4:69033661-69033680 | Msa0866950:intron | 40.0% | |
| !! | CCAAGCCTTATTCCATTAAG+TGG | - | chr5_4:69033676-69033695 | None:intergenic | 40.0% |
| CCACTTAATGGAATAAGGCT+TGG | + | chr5_4:69033673-69033692 | Msa0866950:intron | 40.0% | |
| CCCCTCCCAAAAAAAATCAT+TGG | + | chr5_4:69033714-69033733 | Msa0866950:intron | 40.0% | |
| !! | GGAGCAGATAATTTGCTGTT+TGG | + | chr5_4:69033828-69033847 | Msa0866950:intron | 40.0% |
| TGTTTGGAAGGAGCAAGAAT+TGG | + | chr5_4:69033844-69033863 | Msa0866950:CDS | 40.0% | |
| ! | CAGTATGAGACATCTTTTGC+TGG | + | chr5_4:69033871-69033890 | Msa0866950:CDS | 40.0% |
| AATCGTCAGCAAATGGGAAA+CGG | - | chr5_4:69033983-69034002 | None:intergenic | 40.0% | |
| AAAATGGAACTGTGTGCTCA+AGG | - | chr5_4:69034092-69034111 | None:intergenic | 40.0% | |
| AGATCTATTGCAAGCATACG+TGG | + | chr5_4:69034267-69034286 | Msa0866950:CDS | 40.0% | |
| !! | TTAGGCTTTGTTTGGGAGTT+AGG | - | chr5_4:69034836-69034855 | None:intergenic | 40.0% |
| CATGCAGGTCAGACTTATAA+AGG | + | chr5_4:69034994-69035013 | Msa0866950:intron | 40.0% | |
| ACTCGATCATGTGATAAGGA+AGG | - | chr5_4:69035057-69035076 | None:intergenic | 40.0% | |
| CCGTGTTAACATTTGAAAGG+GGG | - | chr5_4:69035170-69035189 | None:intergenic | 40.0% | |
| CCCCCTTTCAAATGTTAACA+CGG | + | chr5_4:69035167-69035186 | Msa0866950:intron | 40.0% | |
| CCCGTGTTAACATTTGAAAG+GGG | - | chr5_4:69035171-69035190 | None:intergenic | 40.0% | |
| CCCCTTTCAAATGTTAACAC+GGG | + | chr5_4:69035168-69035187 | Msa0866950:intron | 40.0% | |
| ATTTATCTTCGACATTGGCC+AGG | - | chr5_4:69035399-69035418 | None:intergenic | 40.0% | |
| ! | ATGATGGAAGATGGAATCTC+AGG | + | chr5_4:69035437-69035456 | Msa0866950:CDS | 40.0% |
| ACACAATCTCTGCATATGCT+GGG | - | chr5_4:69035936-69035955 | None:intergenic | 40.0% | |
| AACACAATCTCTGCATATGC+TGG | - | chr5_4:69035937-69035956 | None:intergenic | 40.0% | |
| ! | TATATCTGCTGAAGTGCTTG+TGG | - | chr5_4:69035967-69035986 | None:intergenic | 40.0% |
| ! | GAGAATCTAAGACTGCAGAA+AGG | - | chr5_4:69036014-69036033 | None:intergenic | 40.0% |
| AACGAGGGAGCAATATATGT+TGG | - | chr5_4:69036159-69036178 | None:intergenic | 40.0% | |
| CTTGTTGCGAGAGGGATAAT+CGG | - | chr5_4:69030561-69030580 | None:intergenic | 45.0% | |
| CCGCAGTTTGAACAATATGC+TGG | + | chr5_4:69030715-69030734 | Msa0866950:intron | 45.0% | |
| GCAAGATGATGATAGTCGCT+TGG | + | chr5_4:69030862-69030881 | Msa0866950:CDS | 45.0% | |
| ACTTGGCTGACCGTATTTCT+AGG | + | chr5_4:69031012-69031031 | Msa0866950:CDS | 45.0% | |
| AGCCTGGCTTAGTCATCTAT+TGG | + | chr5_4:69031426-69031445 | Msa0866950:intron | 45.0% | |
| GGGTCCAGTTCAATTATTGC+CGG | - | chr5_4:69031497-69031516 | None:intergenic | 45.0% | |
| GTGATCTTGTCAGGTGCATA+TGG | + | chr5_4:69031987-69032006 | Msa0866950:intron | 45.0% | |
| ATCTTGTCAGGTGCATATGG+AGG | + | chr5_4:69031990-69032009 | Msa0866950:intron | 45.0% | |
| CCCTACTTGTCCATATGCAT+TGG | - | chr5_4:69032410-69032429 | None:intergenic | 45.0% | |
| ! | GGCTTGGTTGTTGTTGTTGT+TGG | - | chr5_4:69032495-69032514 | None:intergenic | 45.0% |
| !! | CTCGGTGTTTATATCCTCGT+TGG | - | chr5_4:69032579-69032598 | None:intergenic | 45.0% |
| CAACGAGGATATAAACACCG+AGG | + | chr5_4:69032577-69032596 | Msa0866950:intron | 45.0% | |
| TCCATAACCAGTACGTTGCT+GGG | - | chr5_4:69032794-69032813 | None:intergenic | 45.0% | |
| GAATTGATGAGACACTGCCT+TGG | + | chr5_4:69032974-69032993 | Msa0866950:intron | 45.0% | |
| GAATCGAACAACCATCAGCT+TGG | + | chr5_4:69033299-69033318 | Msa0866950:intron | 45.0% | |
| !! | ACCATCAGCTTGGTGTTGAT+TGG | + | chr5_4:69033309-69033328 | Msa0866950:intron | 45.0% |
| ACCAATCAACACCAAGCTGA+TGG | - | chr5_4:69033313-69033332 | None:intergenic | 45.0% | |
| TGACGATCCAAGCAGTGTTA+AGG | + | chr5_4:69033356-69033375 | Msa0866950:intron | 45.0% | |
| CCATCAATGTCTGCTACCAT+AGG | - | chr5_4:69033466-69033485 | None:intergenic | 45.0% | |
| CCTATGGTAGCAGACATTGA+TGG | + | chr5_4:69033463-69033482 | Msa0866950:intron | 45.0% | |
| GCCAAGGAGGGTTAACAAAA+TGG | + | chr5_4:69033507-69033526 | Msa0866950:intron | 45.0% | |
| ! | ATGGAATAAGGCTTGGTTGC+AGG | + | chr5_4:69033680-69033699 | Msa0866950:intron | 45.0% |
| ! | TGGAATAAGGCTTGGTTGCA+GGG | + | chr5_4:69033681-69033700 | Msa0866950:intron | 45.0% |
| AGGCTGGATCTTTCTCTAGA+TGG | + | chr5_4:69033952-69033971 | Msa0866950:intron | 45.0% | |
| TGCAAGCATACGTGGATAGA+CGG | + | chr5_4:69034275-69034294 | Msa0866950:CDS | 45.0% | |
| TCTATGTTAAAGGTTGGGGC+AGG | + | chr5_4:69034865-69034884 | Msa0866950:intron | 45.0% | |
| ACCTGCATGACATTTGTAGG+AGG | - | chr5_4:69034983-69035002 | None:intergenic | 45.0% | |
| CTGACCTGCATGACATTTGT+AGG | - | chr5_4:69034986-69035005 | None:intergenic | 45.0% | |
| TGGTAGACTCATGGTTCGTA+AGG | - | chr5_4:69035504-69035523 | None:intergenic | 45.0% | |
| TTCACCTTCTGGTAGACTCA+TGG | - | chr5_4:69035513-69035532 | None:intergenic | 45.0% | |
| ATGTGATCGTGTGTGCAACT+AGG | + | chr5_4:69035599-69035618 | Msa0866950:intron | 45.0% | |
| TCCTTCAATATCCTCTCTGG+TGG | + | chr5_4:69036181-69036200 | Msa0866950:three_prime_UTR | 45.0% | |
| ACCACCAGAGAGGATATTGA+AGG | - | chr5_4:69036185-69036204 | None:intergenic | 45.0% | |
| !!! | AATATCTTTTATTTTATTTT+GGG | - | chr5_4:69031517-69031536 | None:intergenic | 5.0% |
| !!! | AAATATCTTTTATTTTATTT+TGG | - | chr5_4:69031518-69031537 | None:intergenic | 5.0% |
| !!! | TTTAATATTTTTTATGTATT+TGG | + | chr5_4:69033806-69033825 | Msa0866950:intron | 5.0% |
| !!! | TTAATATTTTTTATGTATTT+GGG | + | chr5_4:69033807-69033826 | Msa0866950:intron | 5.0% |
| CGCGATGCGATTCGTTGAAA+CGG | + | chr5_4:69030478-69030497 | Msa0866950:exon | 50.0% | |
| GGGATAATCGGCAGAGTGAA+AGG | - | chr5_4:69030549-69030568 | None:intergenic | 50.0% | |
| CGATTATCCCTCTCGCAACA+AGG | + | chr5_4:69030559-69030578 | Msa0866950:CDS | 50.0% | |
| AGCATTACCACTTCCCCCAT+GGG | - | chr5_4:69030754-69030773 | None:intergenic | 50.0% | |
| AAGCATTACCACTTCCCCCA+TGG | - | chr5_4:69030755-69030774 | None:intergenic | 50.0% | |
| GCACGAGCTTCTCAAACACA+AGG | + | chr5_4:69031162-69031181 | Msa0866950:CDS | 50.0% | |
| GATGGGGAACAGTGGAATGA+TGG | + | chr5_4:69031806-69031825 | Msa0866950:CDS | 50.0% | |
| !!! | AGTTTTGAGTATGGGGGGTG+TGG | + | chr5_4:69032452-69032471 | Msa0866950:intron | 50.0% |
| ! | CAAGCCTTATCCCGCTAAGT+GGG | + | chr5_4:69032509-69032528 | Msa0866950:intron | 50.0% |
| ! | AAGCCTTATCCCGCTAAGTG+GGG | + | chr5_4:69032510-69032529 | Msa0866950:intron | 50.0% |
| !! | ACCCAGCAACGTACTGGTTA+TGG | + | chr5_4:69032790-69032809 | Msa0866950:intron | 50.0% |
| GTCCATAACCAGTACGTTGC+TGG | - | chr5_4:69032795-69032814 | None:intergenic | 50.0% | |
| GTGTGGAGCAGACATTGATG+TGG | + | chr5_4:69033397-69033416 | Msa0866950:intron | 50.0% | |
| !! | AGACATTGATGTGGTGCTGC+AGG | + | chr5_4:69033406-69033425 | Msa0866950:intron | 50.0% |
| ATCTACCATGTGTCCACCCT+AGG | - | chr5_4:69033432-69033451 | None:intergenic | 50.0% | |
| CTTGGCAATAATTGCCGCCA+AGG | - | chr5_4:69033493-69033512 | None:intergenic | 50.0% | |
| CTTGGCGGCAATTATTGCCA+AGG | + | chr5_4:69033491-69033510 | Msa0866950:intron | 50.0% | |
| GCGGCAATTATTGCCAAGGA+GGG | + | chr5_4:69033495-69033514 | Msa0866950:intron | 50.0% | |
| CTGGATGGTCCAATAGCTAG+AGG | + | chr5_4:69033536-69033555 | Msa0866950:intron | 50.0% | |
| TGAGCTGACATTATGGAGGC+TGG | + | chr5_4:69033936-69033955 | Msa0866950:intron | 50.0% | |
| GTCAGCAAATGGGAAACGGA+AGG | - | chr5_4:69033979-69033998 | None:intergenic | 50.0% | |
| ! | TGAGTTTTACCACTGCGTGC+TGG | + | chr5_4:69034035-69034054 | Msa0866950:CDS | 50.0% |
| GCAAGCATACGTGGATAGAC+GGG | + | chr5_4:69034276-69034295 | Msa0866950:CDS | 50.0% | |
| ATACGTGGATAGACGGGAAC+AGG | + | chr5_4:69034282-69034301 | Msa0866950:CDS | 50.0% | |
| ! | GGAGTTAGGAGCGTAAGTGA+AGG | - | chr5_4:69034822-69034841 | None:intergenic | 50.0% |
| TTAAAGGTTGGGGCAGGCAT+AGG | + | chr5_4:69034871-69034890 | Msa0866950:intron | 50.0% | |
| GCCTCCTACAAATGTCATGC+AGG | + | chr5_4:69034979-69034998 | Msa0866950:intron | 50.0% | |
| ! | GCTAGCACTGAGATTCGAGT+TGG | - | chr5_4:69035377-69035396 | None:intergenic | 50.0% |
| TAGGATAGTCGAACTGGTGC+AGG | - | chr5_4:69035470-69035489 | None:intergenic | 50.0% | |
| TCTGCGTAGGATAGTCGAAC+TGG | - | chr5_4:69035476-69035495 | None:intergenic | 50.0% | |
| CGAACCATGAGTCTACCAGA+AGG | + | chr5_4:69035506-69035525 | Msa0866950:CDS | 50.0% | |
| TGGGAGCAGGCTTGTAGAAT+AGG | - | chr5_4:69035829-69035848 | None:intergenic | 50.0% | |
| ACTTAAGTGTGCATGGGAGC+AGG | - | chr5_4:69035842-69035861 | None:intergenic | 50.0% | |
| CGTTGAAACGGAGAGCGATG+CGG | + | chr5_4:69030490-69030509 | Msa0866950:CDS | 55.0% | |
| GAAGGGACCTTGTTGCGAGA+GGG | - | chr5_4:69030569-69030588 | None:intergenic | 55.0% | |
| AGAAGGGACCTTGTTGCGAG+AGG | - | chr5_4:69030570-69030589 | None:intergenic | 55.0% | |
| CCACTTAGCGGGATAAGGCT+TGG | - | chr5_4:69032511-69032530 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTATCCCGCTAAG+TGG | + | chr5_4:69032508-69032527 | Msa0866950:intron | 55.0% |
| CTTATCCCGCTAAGTGGGGT+CGG | + | chr5_4:69032514-69032533 | Msa0866950:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+CGG | - | chr5_4:69032523-69032542 | None:intergenic | 55.0% | |
| CTGGGTAGCTAGACTCTCTC+TGG | - | chr5_4:69032776-69032795 | None:intergenic | 55.0% | |
| CTAGCTACCCAGCAACGTAC+TGG | + | chr5_4:69032784-69032803 | Msa0866950:intron | 55.0% | |
| ! | CAGACATTGATGGGCCTCCT+TGG | + | chr5_4:69033473-69033492 | Msa0866950:intron | 55.0% |
| ! | ACATTGATGGGCCTCCTTGG+CGG | + | chr5_4:69033476-69033495 | Msa0866950:intron | 55.0% |
| GGCAATAATTGCCGCCAAGG+AGG | - | chr5_4:69033490-69033509 | None:intergenic | 55.0% | |
| GGCGGCAATTATTGCCAAGG+AGG | + | chr5_4:69033494-69033513 | Msa0866950:intron | 55.0% | |
| ACTTACTCTCCAGCACGCAG+TGG | - | chr5_4:69034047-69034066 | None:intergenic | 55.0% | |
| CTCGAATCTCAGTGCTAGCC+TGG | + | chr5_4:69035378-69035397 | Msa0866950:CDS | 55.0% | |
| ! | TCGTAAGGCGTCTTCTGCGT+AGG | - | chr5_4:69035489-69035508 | None:intergenic | 55.0% |
| TGCAGAAAGGGCGAAGCTCT+AGG | - | chr5_4:69036001-69036020 | None:intergenic | 55.0% | |
| GGTACAAGACACCACCAGAG+AGG | - | chr5_4:69036195-69036214 | None:intergenic | 55.0% | |
| TGGACGGACGTATGCACCCA+TGG | + | chr5_4:69030735-69030754 | Msa0866950:intron | 60.0% | |
| GGACGGACGTATGCACCCAT+GGG | + | chr5_4:69030736-69030755 | Msa0866950:intron | 60.0% | |
| GACGGACGTATGCACCCATG+GGG | + | chr5_4:69030737-69030756 | Msa0866950:intron | 60.0% | |
| ACGGACGTATGCACCCATGG+GGG | + | chr5_4:69030738-69030757 | Msa0866950:intron | 60.0% | |
| GTATGCACCCATGGGGGAAG+TGG | + | chr5_4:69030744-69030763 | Msa0866950:intron | 60.0% | |
| CGACCCCACTTAGCGGGATA+AGG | - | chr5_4:69032516-69032535 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTTAGC+GGG | - | chr5_4:69032522-69032541 | None:intergenic | 60.0% | |
| GCTAAGTGGGGTCGGCTACA+TGG | + | chr5_4:69032522-69032541 | Msa0866950:intron | 60.0% | |
| !! | TGATGTGGTGCTGCAGGCCT+AGG | + | chr5_4:69033412-69033431 | Msa0866950:intron | 60.0% |
| !! | GATGTGGTGCTGCAGGCCTA+GGG | + | chr5_4:69033413-69033432 | Msa0866950:intron | 60.0% |
| ! | GTATGGGGGGTGTGGCAACG+AGG | + | chr5_4:69032460-69032479 | Msa0866950:intron | 65.0% |
| GCAGGCCTAGGGTGGACACA+TGG | + | chr5_4:69033424-69033443 | Msa0866950:intron | 65.0% | |
| !! | GTGGTGCTGCAGGCCTAGGG+TGG | + | chr5_4:69033416-69033435 | Msa0866950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 69030252 | 69036297 | 69030252 | ID=Msa0866950;Name=Msa0866950 |
| chr5_4 | mRNA | 69030252 | 69036297 | 69030252 | ID=Msa0866950-mRNA-1;Parent=Msa0866950;Name=Msa0866950-mRNA-1;_AED=0.12;_eAED=0.12;_QI=230|0.81|0.91|1|0.81|0.83|12|304|335 |
| chr5_4 | exon | 69030252 | 69030580 | 69030252 | ID=Msa0866950-mRNA-1:exon:21793;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69030848 | 69030902 | 69030848 | ID=Msa0866950-mRNA-1:exon:21794;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69030985 | 69031033 | 69030985 | ID=Msa0866950-mRNA-1:exon:21795;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69031113 | 69031183 | 69031113 | ID=Msa0866950-mRNA-1:exon:21796;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69031795 | 69031853 | 69031795 | ID=Msa0866950-mRNA-1:exon:21797;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69032000 | 69032092 | 69032000 | ID=Msa0866950-mRNA-1:exon:21798;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69033835 | 69033892 | 69033835 | ID=Msa0866950-mRNA-1:exon:21799;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69034025 | 69034161 | 69034025 | ID=Msa0866950-mRNA-1:exon:21800;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69034247 | 69034303 | 69034247 | ID=Msa0866950-mRNA-1:exon:21801;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69035001 | 69035074 | 69035001 | ID=Msa0866950-mRNA-1:exon:21802;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69035328 | 69035527 | 69035328 | ID=Msa0866950-mRNA-1:exon:21803;Parent=Msa0866950-mRNA-1 |
| chr5_4 | exon | 69035938 | 69036297 | 69035938 | ID=Msa0866950-mRNA-1:exon:21804;Parent=Msa0866950-mRNA-1 |
| chr5_4 | five_prime_UTR | 69030252 | 69030481 | 69030252 | ID=Msa0866950-mRNA-1:five_prime_utr;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69030482 | 69030580 | 69030482 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69030848 | 69030902 | 69030848 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69030985 | 69031033 | 69030985 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69031113 | 69031183 | 69031113 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69031795 | 69031853 | 69031795 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69032000 | 69032092 | 69032000 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69033835 | 69033892 | 69033835 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69034025 | 69034161 | 69034025 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69034247 | 69034303 | 69034247 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69035001 | 69035074 | 69035001 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69035328 | 69035527 | 69035328 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | CDS | 69035938 | 69035993 | 69035938 | ID=Msa0866950-mRNA-1:cds;Parent=Msa0866950-mRNA-1 |
| chr5_4 | three_prime_UTR | 69035994 | 69036297 | 69035994 | ID=Msa0866950-mRNA-1:three_prime_utr;Parent=Msa0866950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
