AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0308270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308270 MtrunA17_Chr2g0281861 78.088 251 16 3 1 212 1 251 1.69e-135 380
Msa0308270 MtrunA17_Chr4g0047521 64.940 251 46 5 1 212 1 248 3.12e-104 300
Msa0308270 MtrunA17_Chr3g0104651 47.325 243 88 4 10 212 13 255 1.76e-71 218
Msa0308270 MtrunA17_Chr4g0006201 50.431 232 76 3 10 202 6 237 7.91e-71 216
Msa0308270 MtrunA17_Chr7g0242261 48.718 234 80 4 5 198 16 249 2.88e-65 202
Msa0308270 MtrunA17_Chr8g0376861 36.400 250 101 6 14 211 10 253 7.23e-42 142
Msa0308270 MtrunA17_Chr3g0123161 35.827 254 99 7 14 211 13 258 9.66e-38 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308270 AT3G47160.1 51.037 241 77 4 13 212 5 245 1.66e-79 238
Msa0308270 AT3G47160.2 48.617 253 77 5 13 212 5 257 7.09e-76 229
Msa0308270 AT5G01520.1 48.523 237 83 4 10 207 1 237 1.28e-73 223
Msa0308270 AT5G58787.1 51.452 241 73 5 13 212 5 242 1.04e-70 216
Msa0308270 AT5G58787.2 50.885 226 82 7 13 212 5 227 3.01e-63 196
Msa0308270 AT3G47160.3 47.596 208 68 4 46 212 1 208 6.10e-61 189
Msa0308270 AT5G58787.3 47.619 210 81 7 29 212 2 208 1.81e-51 165
Msa0308270 AT5G01520.2 44.848 165 60 3 10 143 1 165 1.60e-43 144
Msa0308270 AT1G24440.1 38.367 245 102 7 13 211 9 250 1.21e-40 139
Msa0308270 AT1G13195.1 37.238 239 104 5 14 207 16 253 2.72e-40 138
Msa0308270 AT1G13195.2 43.624 149 73 3 69 207 68 215 1.05e-32 118
Msa0308270 AT1G24440.2 42.208 154 73 3 71 211 68 218 1.13e-32 117

Find 67 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCCTCTTATGATATTA+AGG 0.242881 2_4:-2461749 Msa0308270:three_prime_UTR
CATATAATCTACCTTTATAT+TGG 0.260470 2_4:+2461622 None:intergenic
AAAGTCTGCATTCAACTATT+TGG 0.271531 2_4:+2461592 None:intergenic
GAGAGTCATAAGGATCAAAA+AGG 0.298294 2_4:+2462030 None:intergenic
AACTCAAGGCTGGAATCTTC+TGG 0.300509 2_4:+2461874 None:intergenic
TATAAACTTTGAATGTAATC+TGG 0.341065 2_4:-2461940 Msa0308270:three_prime_UTR
TGCAATCTTGCTGGAGCCCT+TGG 0.344245 2_4:-2465589 Msa0308270:CDS
TTGTTGTGGTTACTATTTCA+AGG 0.358630 2_4:-2461571 Msa0308270:three_prime_UTR
AAAAGAAATTTACAAGGTAT+TGG 0.363016 2_4:+2466718 None:intergenic
TTTAAGACTGTCACGACAAA+AGG 0.370109 2_4:+2462184 None:intergenic
TGTACATGAAAAGCCTTCTA+AGG 0.378666 2_4:+2462084 None:intergenic
AGAAGAGTGTGGAATATGTA+TGG 0.390272 2_4:-2464959 Msa0308270:CDS
GAGTAAACTCGGGCGATCTC+TGG 0.395134 2_4:-2462160 Msa0308270:CDS
AAAAGAAACAAGTGCGCTGC+TGG 0.395977 2_4:+2465631 None:intergenic
TGGACAGATTGCAATCTTGC+TGG 0.408751 2_4:-2465598 Msa0308270:intron
ACTATGAAACTTGTTGTTGT+TGG 0.410368 2_4:-2466865 Msa0308270:five_prime_UTR
TAGACTATGAACCAATATAA+AGG 0.423597 2_4:-2461633 Msa0308270:three_prime_UTR
TCTGGATATTCACCGATAGT+AGG 0.429327 2_4:-2462142 Msa0308270:CDS
TAACAAGAGAGAACCTTAGA+AGG 0.432085 2_4:-2462097 Msa0308270:CDS
AAGTGGTGGTTCTTCTTCCA+TGG 0.437052 2_4:-2466792 Msa0308270:CDS
CACAGAAATGTGTTCTTTGA+TGG 0.446529 2_4:-2461984 Msa0308270:three_prime_UTR
ATTCACCTTAATATCATAAG+AGG 0.459611 2_4:+2461744 None:intergenic
TTGTTGTAGTTATTGTTCCA+AGG 0.471942 2_4:-2461535 None:intergenic
GTGTTCTTTGATGGGTGGTT+CGG 0.474646 2_4:-2461975 Msa0308270:three_prime_UTR
ATCTTTGATCATGAATGCAT+TGG 0.478399 2_4:-2461689 Msa0308270:three_prime_UTR
AGTTGGTCATGAAGTTGAAA+TGG 0.483667 2_4:-2461844 Msa0308270:three_prime_UTR
TGGTTCATAGTCTAAGTTGT+TGG 0.484833 2_4:+2461642 None:intergenic
TTAGAATTCTTAATAATCCA+AGG 0.493296 2_4:+2465572 None:intergenic
CAGTCTTAAAAGAGTAAACT+CGG 0.499948 2_4:-2462171 Msa0308270:CDS
TTAAGACTGTCACGACAAAA+GGG 0.503150 2_4:+2462185 None:intergenic
TGTTGTGGTTACTATTTCAA+GGG 0.504413 2_4:-2461570 Msa0308270:three_prime_UTR
TGTTGTAGTTATTGTTCCAA+GGG 0.504529 2_4:-2461534 None:intergenic
GTGGTTCTTCTTCCATGGGA+AGG 0.507770 2_4:-2466787 Msa0308270:CDS
ATTAAGAATTCTAATTTACA+AGG 0.511384 2_4:-2465563 Msa0308270:intron
TATCTTAAGTGAGAGTCATA+AGG 0.513554 2_4:+2462020 None:intergenic
GCCTTGAGTTTGCGATGAGT+TGG 0.514298 2_4:-2461861 Msa0308270:three_prime_UTR
ACTCATCGCAAACTCAAGGC+TGG 0.525194 2_4:+2461864 None:intergenic
TGAGGAAACATGTACATAAG+TGG 0.527124 2_4:-2466809 Msa0308270:exon
CTGGATATTCACCGATAGTA+GGG 0.527934 2_4:-2462141 Msa0308270:CDS
TCTTTGTTACAACTTGAAAG+AGG 0.536875 2_4:-2465090 Msa0308270:CDS
AAAACAGAAGGTTGTATGCA+TGG 0.538430 2_4:-2465046 Msa0308270:CDS
TTTGAAAGAGAAGAAGAGTG+TGG 0.544267 2_4:-2464970 Msa0308270:CDS
TTGATCATGAATGCATTGGA+TGG 0.551447 2_4:-2461685 Msa0308270:three_prime_UTR
GTCTACTATGTCCCTACTAT+CGG 0.552253 2_4:+2462130 None:intergenic
CACATGACATGGTTGCAGTT+AGG 0.552857 2_4:+2464913 None:intergenic
AGTGGTGGTTCTTCTTCCAT+GGG 0.553651 2_4:-2466791 Msa0308270:CDS
TCTTTGATGGGTGGTTCGGA+TGG 0.557204 2_4:-2461971 Msa0308270:three_prime_UTR
AGGGATTCTGGTATGATCAA+AGG 0.560502 2_4:+2462050 None:intergenic
AGCATTTCAGGCACATGACA+TGG 0.568729 2_4:+2464902 None:intergenic
TTCCTTAAAAGACCTTCCCA+TGG 0.575494 2_4:+2466775 None:intergenic
ACCAACTCATCGCAAACTCA+AGG 0.575881 2_4:+2461860 None:intergenic
CTGGAATCTTCTGGAAGACG+TGG 0.580626 2_4:+2461883 None:intergenic
AGATTGAATTACTTATCAAG+AGG 0.589731 2_4:-2461782 Msa0308270:three_prime_UTR
TAGAATTCTTAATAATCCAA+GGG 0.590750 2_4:+2465573 None:intergenic
CTTTCAAGTTGTAACAAAGA+CGG 0.593343 2_4:+2465093 None:intergenic
CACGCACCATCGTATTCCCT+CGG 0.609698 2_4:+2465679 None:intergenic
ACAGAAATGTGTTCTTTGAT+GGG 0.615943 2_4:-2461983 Msa0308270:three_prime_UTR
TAGTAGGGACATAGTAGACA+TGG 0.618868 2_4:-2462126 Msa0308270:CDS
TAAGTAATTCAATCTGTACA+AGG 0.625817 2_4:+2461790 None:intergenic
GAAATGTGTTCTTTGATGGG+TGG 0.628752 2_4:-2461980 Msa0308270:three_prime_UTR
TAAGACTGTCACGACAAAAG+GGG 0.632510 2_4:+2462186 None:intergenic
GTTGAATGCAGACTTTGTTG+TGG 0.647394 2_4:-2461585 Msa0308270:three_prime_UTR
GTATCGTAGAAGAGAAGACG+AGG 0.670479 2_4:-2465019 Msa0308270:CDS
AGAAGGTTGTATGCATGGAG+CGG 0.676580 2_4:-2465041 Msa0308270:CDS
GGAAACATGTACATAAGTGG+TGG 0.683193 2_4:-2466806 Msa0308270:exon
AGTCTTAAAAGAGTAAACTC+GGG 0.691812 2_4:-2462170 Msa0308270:CDS
AAGAGGTGTCACTGATGCTG+AGG 0.697146 2_4:-2465073 Msa0308270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTTTATTATTTT+TGG - chr2_4:2461811-2461830 Msa0308270:three_prime_UTR 0.0%
!! GTTAAAAAAAATTAAGATAA+AGG + chr2_4:2463231-2463250 None:intergenic 10.0%
!! TCAATATTATTTATTACATA+TGG - chr2_4:2464099-2464118 Msa0308270:intron 10.0%
!!! AACTTAAAATATTCTTTTTA+AGG - chr2_4:2465858-2465877 Msa0308270:intron 10.0%
!!! ATCATGAGTTATTTTTATTT+TGG - chr2_4:2461840-2461859 Msa0308270:three_prime_UTR 15.0%
!!! TTTATTTTGGAATTATTTTC+TGG - chr2_4:2461853-2461872 Msa0308270:three_prime_UTR 15.0%
!!! TTATTTTGGAATTATTTTCT+GGG - chr2_4:2461854-2461873 Msa0308270:three_prime_UTR 15.0%
!!! ATTTTTCTTTTCCATAAATA+TGG - chr2_4:2461921-2461940 Msa0308270:three_prime_UTR 15.0%
!! TTATAACTTGATCATATAAT+TGG - chr2_4:2462693-2462712 Msa0308270:intron 15.0%
!! TATAACTTGATCATATAATT+GGG - chr2_4:2462694-2462713 Msa0308270:intron 15.0%
!! ATTAAGAATTCTAATTTACA+AGG - chr2_4:2462853-2462872 Msa0308270:intron 15.0%
!! TTATAAAAATAACTTAGACA+TGG - chr2_4:2463098-2463117 Msa0308270:intron 15.0%
!! TTCAGAACTAAATTAATTTA+AGG + chr2_4:2463722-2463741 None:intergenic 15.0%
!! GTAATAAATAATATTGAGAT+TGG + chr2_4:2464096-2464115 None:intergenic 15.0%
!!! AAAATACGAATCTTTAAAAT+TGG + chr2_4:2464176-2464195 None:intergenic 15.0%
!! GAAATCTAATAAACTTAATT+AGG + chr2_4:2465134-2465153 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGATGCA+TGG + chr2_4:2465301-2465320 None:intergenic 15.0%
!! AAAAAAATACATATTATCTG+TGG - chr2_4:2465314-2465333 Msa0308270:intron 15.0%
!! AAAAAATACATATTATCTGT+GGG - chr2_4:2465315-2465334 Msa0308270:intron 15.0%
!!! ACATTTTTTTTTTTTTTTGC+AGG - chr2_4:2466187-2466206 Msa0308270:intron 15.0%
!!! AAAAGAAAAACAGTATTTTG+AGG - chr2_4:2461589-2461608 Msa0308270:three_prime_UTR 20.0%
!! AAAAGAAATTTACAAGGTAT+TGG + chr2_4:2461701-2461720 None:intergenic 20.0%
!!! TTTTTTAGTTGTTTTCTTGA+AGG - chr2_4:2461768-2461787 Msa0308270:three_prime_UTR 20.0%
!!! TTTTTAGTTGTTTTCTTGAA+GGG - chr2_4:2461769-2461788 Msa0308270:three_prime_UTR 20.0%
!!! TATTTTGGAATTATTTTCTG+GGG - chr2_4:2461855-2461874 Msa0308270:three_prime_UTR 20.0%
!! GAACCAAAAAAAAAAAATCA+GGG + chr2_4:2461893-2461912 None:intergenic 20.0%
!! TGAACCAAAAAAAAAAAATC+AGG + chr2_4:2461894-2461913 None:intergenic 20.0%
!! TAGAATTCTTAATAATCCAA+GGG + chr2_4:2462846-2462865 None:intergenic 20.0%
!! TTAGAATTCTTAATAATCCA+AGG + chr2_4:2462847-2462866 None:intergenic 20.0%
!! TAGCTTATATGAAAAAAGTT+TGG - chr2_4:2463058-2463077 Msa0308270:intron 20.0%
!! CCATATAAAAAGAAATCATA+CGG + chr2_4:2463683-2463702 None:intergenic 20.0%
!! AGATAAAGAAGAATTTAACA+TGG + chr2_4:2464224-2464243 None:intergenic 20.0%
!! ACAATTCAAAACTAATGATT+TGG + chr2_4:2464276-2464295 None:intergenic 20.0%
!! TATAATACCATTATGAAAGA+AGG - chr2_4:2464479-2464498 Msa0308270:intron 20.0%
!!! GATATGAAATAGCTTTATAA+AGG - chr2_4:2465029-2465048 Msa0308270:CDS 20.0%
!! ATTAATTACTAATGAGAATC+AGG - chr2_4:2465180-2465199 Msa0308270:intron 20.0%
!! AAAAATACATATTATCTGTG+GGG - chr2_4:2465316-2465335 Msa0308270:intron 20.0%
!!! TTGGTATTTGTTTTATTGAT+CGG - chr2_4:2465825-2465844 Msa0308270:intron 20.0%
!! TATAAACTTTGAATGTAATC+TGG - chr2_4:2466476-2466495 Msa0308270:intron 20.0%
!! CATATAATCTACCTTTATAT+TGG + chr2_4:2466797-2466816 None:intergenic 20.0%
! GAAGGAAAAAGAAATTTACA+AGG + chr2_4:2461707-2461726 None:intergenic 25.0%
! GAGAATTGAAAGAAAAAAGA+AGG + chr2_4:2461725-2461744 None:intergenic 25.0%
!!! AAGCCCTGATTTTTTTTTTT+TGG - chr2_4:2461887-2461906 Msa0308270:three_prime_UTR 25.0%
!! TTTCTTTTCCATAAATATGG+TGG - chr2_4:2461924-2461943 Msa0308270:three_prime_UTR 25.0%
! TAAATTCACCACCATATTTA+TGG + chr2_4:2461935-2461954 None:intergenic 25.0%
! TTTATTTCACTGCAAATTCA+TGG - chr2_4:2461951-2461970 Msa0308270:three_prime_UTR 25.0%
! CAGTTATGAATAAATTCTTG+TGG - chr2_4:2462050-2462069 Msa0308270:CDS 25.0%
!!! ATTCTTGTGGAATTTTTCAA+TGG - chr2_4:2462063-2462082 Msa0308270:CDS 25.0%
!!! TTTGTTTTGTTTTGTGTGAA+TGG - chr2_4:2462314-2462333 Msa0308270:intron 25.0%
! ATAGATCAGGAAACAATAAT+TGG + chr2_4:2462443-2462462 None:intergenic 25.0%
! AATTATGTTAAGACTTTCGA+CGG - chr2_4:2462620-2462639 Msa0308270:intron 25.0%
! GAATTCTAATTTACAAGGTT+AGG - chr2_4:2462858-2462877 Msa0308270:intron 25.0%
!! CATTATGAACTGAGAAATTT+TGG - chr2_4:2462901-2462920 Msa0308270:intron 25.0%
! ATGAAAGAAAAGCAAGTATT+AGG - chr2_4:2463186-2463205 Msa0308270:intron 25.0%
! TGAAAGAAAAGCAAGTATTA+GGG - chr2_4:2463187-2463206 Msa0308270:intron 25.0%
!!! GTTTTAAGAAGTATGAAGTT+TGG - chr2_4:2463604-2463623 Msa0308270:intron 25.0%
!! CCGTATGATTTCTTTTTATA+TGG - chr2_4:2463680-2463699 Msa0308270:intron 25.0%
! TCACATACATGATTCTATAT+AGG - chr2_4:2463742-2463761 Msa0308270:intron 25.0%
!! TCGTAAGTCTTGTATTAATT+CGG - chr2_4:2463796-2463815 Msa0308270:intron 25.0%
!! TTGTATTAATTCGGTTTGTT+TGG - chr2_4:2463805-2463824 Msa0308270:intron 25.0%
! ACTTAAAGATGCTCAAAAAA+TGG - chr2_4:2463984-2464003 Msa0308270:intron 25.0%
! CTTAAAGATGCTCAAAAAAT+GGG - chr2_4:2463985-2464004 Msa0308270:intron 25.0%
! ACAAGTATCAATATGAGATT+CGG + chr2_4:2464026-2464045 None:intergenic 25.0%
!!! GAATCTTTAAAATTGGAGTT+GGG + chr2_4:2464169-2464188 None:intergenic 25.0%
!!! ATCATTAGTTTTGAATTGTG+TGG - chr2_4:2464277-2464296 Msa0308270:intron 25.0%
! TAAGTATATATGTCATGCAT+AGG + chr2_4:2464459-2464478 None:intergenic 25.0%
! TCAAATCATGGTTTGAATTT+CGG + chr2_4:2464875-2464894 None:intergenic 25.0%
!!! TTTTAAAATGGCTCAAATCA+TGG + chr2_4:2464887-2464906 None:intergenic 25.0%
! AAAGGTTATTAAAATCGAGT+TGG + chr2_4:2464974-2464993 None:intergenic 25.0%
!!! AACTCGATTTTAATAACCTT+TGG - chr2_4:2464973-2464992 Msa0308270:CDS 25.0%
! TGAGATTACAATGATTTGAA+AGG - chr2_4:2465064-2465083 Msa0308270:CDS 25.0%
!!! ATTTTCTTCTGGAACTATTA+CGG - chr2_4:2465099-2465118 Msa0308270:CDS 25.0%
! TATATACATATTGTCTGAGT+GGG - chr2_4:2465262-2465281 Msa0308270:intron 25.0%
!!! TTTTTTTTTGATGCATGGTA+GGG + chr2_4:2465296-2465315 None:intergenic 25.0%
!!! TTTTTTTTTTGATGCATGGT+AGG + chr2_4:2465297-2465316 None:intergenic 25.0%
!! GAGTTATTTATAGCCTTTTT+GGG - chr2_4:2465417-2465436 Msa0308270:intron 25.0%
! TGAATGATAAGTATTCTATG+TGG - chr2_4:2465754-2465773 Msa0308270:intron 25.0%
! TTAGGCTTTGCATATTATAT+TGG - chr2_4:2465806-2465825 Msa0308270:intron 25.0%
!!! TTTTAATTATAGTGATGTCC+TGG - chr2_4:2465883-2465902 Msa0308270:intron 25.0%
! CAATGTTCATATATCTTATG+TGG - chr2_4:2465915-2465934 Msa0308270:intron 25.0%
! AAAACAAAGACATTTGAAAG+AGG + chr2_4:2465952-2465971 None:intergenic 25.0%
! TAAGTAATTCAATCTGTACA+AGG + chr2_4:2466629-2466648 None:intergenic 25.0%
! AGATTGAATTACTTATCAAG+AGG - chr2_4:2466634-2466653 Msa0308270:intron 25.0%
! ATTCACCTTAATATCATAAG+AGG + chr2_4:2466675-2466694 None:intergenic 25.0%
!!! ATCAAAGATTTGTTTTAGGA+GGG + chr2_4:2466716-2466735 None:intergenic 25.0%
!!! CATGATCAAAGATTTGTTTT+AGG + chr2_4:2466720-2466739 None:intergenic 25.0%
! TAGACTATGAACCAATATAA+AGG - chr2_4:2466783-2466802 Msa0308270:CDS 25.0%
!! ACTATGAAACTTGTTGTTGT+TGG - chr2_4:2461551-2461570 Msa0308270:three_prime_UTR 30.0%
AGTCAAAACTTAGACAACTT+TGG - chr2_4:2462199-2462218 Msa0308270:CDS 30.0%
!!! ACTCAGATGGAGAATTTTTT+TGG - chr2_4:2462243-2462262 Msa0308270:intron 30.0%
!!! ATTTTGTTTTCTCCACCTTA+TGG - chr2_4:2462342-2462361 Msa0308270:intron 30.0%
TGCAATGCATATTATAGATC+AGG + chr2_4:2462456-2462475 None:intergenic 30.0%
!!! TTTTTTCGCTCAATGTTTCA+AGG - chr2_4:2462499-2462518 Msa0308270:intron 30.0%
ATTATGTTAAGACTTTCGAC+GGG - chr2_4:2462621-2462640 Msa0308270:intron 30.0%
!!! TGTTTCTTTTTCTGGTTCAA+TGG - chr2_4:2462798-2462817 Msa0308270:intron 30.0%
! ATTTACAAGGTTAGGCATTT+TGG - chr2_4:2462866-2462885 Msa0308270:intron 30.0%
ACTTATTTGAGCTTACTTAC+TGG - chr2_4:2462943-2462962 Msa0308270:intron 30.0%
! TTTTCTTTCATGTGTAGACA+TGG + chr2_4:2463177-2463196 None:intergenic 30.0%
! TGAAATTCTGTATTGATCAG+CGG - chr2_4:2463292-2463311 Msa0308270:intron 30.0%
!! CTTTCAAGTTGTAACAAAGA+CGG + chr2_4:2463326-2463345 None:intergenic 30.0%
TCTTTGTTACAACTTGAAAG+AGG - chr2_4:2463326-2463345 Msa0308270:intron 30.0%
!!! CATTCCTTATTTTACGATCA+TGG - chr2_4:2463574-2463593 Msa0308270:intron 30.0%
CTTATGCAAAATCTGAATGA+TGG + chr2_4:2463864-2463883 None:intergenic 30.0%
TCATATATATGGTAAAGCAC+AGG + chr2_4:2463904-2463923 None:intergenic 30.0%
TAAGTCATAGCTTAGAAACT+AGG + chr2_4:2463969-2463988 None:intergenic 30.0%
!! CGAATCTTTAAAATTGGAGT+TGG + chr2_4:2464170-2464189 None:intergenic 30.0%
TAAATGATGTGATCTGATGT+AGG - chr2_4:2464195-2464214 Msa0308270:intron 30.0%
AAATGATGTGATCTGATGTA+GGG - chr2_4:2464196-2464215 Msa0308270:intron 30.0%
CTTGAGATTCTTGATAAACT+TGG - chr2_4:2464384-2464403 Msa0308270:intron 30.0%
CATTATGAAAGAAGGAAACA+GGG - chr2_4:2464487-2464506 Msa0308270:intron 30.0%
AAAGAGGTTCTTCTTTACTT+AGG - chr2_4:2465005-2465024 Msa0308270:CDS 30.0%
!! TGAAATAGCTTTATAAAGGC+CGG - chr2_4:2465033-2465052 Msa0308270:CDS 30.0%
! AGAATCAGGCACAATATTTT+AGG - chr2_4:2465194-2465213 Msa0308270:intron 30.0%
ACAGAATCTAAATACAGTGT+TGG + chr2_4:2465225-2465244 None:intergenic 30.0%
CTATATACATATTGTCTGAG+TGG - chr2_4:2465261-2465280 Msa0308270:intron 30.0%
ATATACATATTGTCTGAGTG+GGG - chr2_4:2465263-2465282 Msa0308270:intron 30.0%
!!! TTTTTTTTGATGCATGGTAG+GGG + chr2_4:2465295-2465314 None:intergenic 30.0%
TGAGTACAATACTGAAACTA+GGG - chr2_4:2465352-2465371 Msa0308270:intron 30.0%
! GGAGTTATTTATAGCCTTTT+TGG - chr2_4:2465416-2465435 Msa0308270:intron 30.0%
TTGTAGGATAATGCTCTAAT+TGG - chr2_4:2465709-2465728 Msa0308270:intron 30.0%
CATACAGCTTTCAATTAAAC+AGG + chr2_4:2466160-2466179 None:intergenic 30.0%
CAGTCTTAAAAGAGTAAACT+CGG - chr2_4:2466245-2466264 Msa0308270:intron 30.0%
AGTCTTAAAAGAGTAAACTC+GGG - chr2_4:2466246-2466265 Msa0308270:intron 30.0%
AGAGTCATAAGGATCAAAAA+GGG + chr2_4:2466388-2466407 None:intergenic 30.0%
TATCTTAAGTGAGAGTCATA+AGG + chr2_4:2466399-2466418 None:intergenic 30.0%
ACAGAAATGTGTTCTTTGAT+GGG - chr2_4:2466433-2466452 Msa0308270:intron 30.0%
ATGTGCCTCTTATGATATTA+AGG - chr2_4:2466667-2466686 Msa0308270:intron 30.0%
!!! GATCAAAGATTTGTTTTAGG+AGG + chr2_4:2466717-2466736 None:intergenic 30.0%
ATCTTTGATCATGAATGCAT+TGG - chr2_4:2466727-2466746 Msa0308270:intron 30.0%
AAAGTCTGCATTCAACTATT+TGG + chr2_4:2466827-2466846 None:intergenic 30.0%
TTGTTGTGGTTACTATTTCA+AGG - chr2_4:2466845-2466864 Msa0308270:five_prime_UTR 30.0%
TGTTGTGGTTACTATTTCAA+GGG - chr2_4:2466846-2466865 Msa0308270:five_prime_UTR 30.0%
TGAGGAAACATGTACATAAG+TGG - chr2_4:2461607-2461626 Msa0308270:three_prime_UTR 35.0%
! TCACTGCAAATTCATGGTTT+TGG - chr2_4:2461957-2461976 Msa0308270:three_prime_UTR 35.0%
ACTCATCAAGAAAAAGTTGC+TGG + chr2_4:2462666-2462685 None:intergenic 35.0%
ATCATATAATTGGGCGTGTA+GGG - chr2_4:2462703-2462722 Msa0308270:intron 35.0%
!!! AGGTTAGGCATTTTGGTTTT+TGG - chr2_4:2462873-2462892 Msa0308270:intron 35.0%
! CTAAATTTTCCTCATGCTGT+AGG - chr2_4:2463130-2463149 Msa0308270:intron 35.0%
GCAAGTATTAGGGAATTCTA+TGG - chr2_4:2463197-2463216 Msa0308270:intron 35.0%
! AGTTTGCATTTTACTGTGTG+TGG - chr2_4:2463256-2463275 Msa0308270:intron 35.0%
TGCTGAGGATAAAAAACAGA+AGG - chr2_4:2463358-2463377 Msa0308270:intron 35.0%
AAAACAGAAGGTTGTATGCA+TGG - chr2_4:2463370-2463389 Msa0308270:intron 35.0%
TTTGAAAGAGAAGAAGAGTG+TGG - chr2_4:2463446-2463465 Msa0308270:intron 35.0%
! AGAAGAGTGTGGAATATGTA+TGG - chr2_4:2463457-2463476 Msa0308270:intron 35.0%
AATAAGGAATGTGTGTGTGA+GGG + chr2_4:2463565-2463584 None:intergenic 35.0%
AAATAAGGAATGTGTGTGTG+AGG + chr2_4:2463566-2463585 None:intergenic 35.0%
CAAGCCATGATCGTAAAATA+AGG + chr2_4:2463581-2463600 None:intergenic 35.0%
!! ATTTTACGATCATGGCTTGT+TGG - chr2_4:2463582-2463601 Msa0308270:intron 35.0%
CCTGTTAGGCATCATATATA+TGG + chr2_4:2463915-2463934 None:intergenic 35.0%
CCATATATATGATGCCTAAC+AGG - chr2_4:2463912-2463931 Msa0308270:intron 35.0%
ACAACATAACCCTCTTCTTA+CGG + chr2_4:2463940-2463959 None:intergenic 35.0%
CAGTATTACACACACATTCA+TGG - chr2_4:2464061-2464080 Msa0308270:intron 35.0%
ATTACATATGGACTTGAGAG+AGG - chr2_4:2464111-2464130 Msa0308270:intron 35.0%
TTACATATGGACTTGAGAGA+GGG - chr2_4:2464112-2464131 Msa0308270:intron 35.0%
TAAAATTGGAGTTGGGTAAG+TGG + chr2_4:2464162-2464181 None:intergenic 35.0%
CCTGTTTCCTTCTTTCATAA+TGG + chr2_4:2464489-2464508 None:intergenic 35.0%
CCATTATGAAAGAAGGAAAC+AGG - chr2_4:2464486-2464505 Msa0308270:intron 35.0%
GTGTTCTCACTTACTTTACT+TGG + chr2_4:2464544-2464563 None:intergenic 35.0%
AGTGAGAACACATTCATTGA+AGG - chr2_4:2464553-2464572 Msa0308270:intron 35.0%
AACTGTTTGGAAACAAGGTT+AGG + chr2_4:2464808-2464827 None:intergenic 35.0%
TGAATTTCGGAGACAAGAAA+GGG + chr2_4:2464862-2464881 None:intergenic 35.0%
TTGAATTTCGGAGACAAGAA+AGG + chr2_4:2464863-2464882 None:intergenic 35.0%
!! GAAATAGCTTTATAAAGGCC+GGG - chr2_4:2465034-2465053 Msa0308270:CDS 35.0%
TATACATATTGTCTGAGTGG+GGG - chr2_4:2465264-2465283 Msa0308270:intron 35.0%
GTGAGTACAATACTGAAACT+AGG - chr2_4:2465351-2465370 Msa0308270:intron 35.0%
CTAGGGTTTAGTATCTGATT+AGG - chr2_4:2465369-2465388 Msa0308270:intron 35.0%
AGGCTATAAATAACTCCCTT+GGG + chr2_4:2465413-2465432 None:intergenic 35.0%
AAGGCTATAAATAACTCCCT+TGG + chr2_4:2465414-2465433 None:intergenic 35.0%
TATGCGTTTCTACCTATCTT+GGG + chr2_4:2465474-2465493 None:intergenic 35.0%
ATATGCGTTTCTACCTATCT+TGG + chr2_4:2465475-2465494 None:intergenic 35.0%
AGCCAGAATATCCATATTTG+GGG + chr2_4:2465502-2465521 None:intergenic 35.0%
CAGCCAGAATATCCATATTT+GGG + chr2_4:2465503-2465522 None:intergenic 35.0%
TCAGCCAGAATATCCATATT+TGG + chr2_4:2465504-2465523 None:intergenic 35.0%
GACCACCAATACTCAAATAA+GGG + chr2_4:2465626-2465645 None:intergenic 35.0%
ATTATCCTACAAATGAACCC+TGG + chr2_4:2465701-2465720 None:intergenic 35.0%
ATGCTCTAATTGGAACTTAC+TGG - chr2_4:2465719-2465738 Msa0308270:intron 35.0%
TGAACATTGAAAACAGTTCC+AGG + chr2_4:2465904-2465923 None:intergenic 35.0%
GAAACTTGGTTAGACAACTA+GGG + chr2_4:2465993-2466012 None:intergenic 35.0%
CTAGTTGTCTAACCAAGTTT+CGG - chr2_4:2465992-2466011 Msa0308270:intron 35.0%
AGAAAACAATCACCGAAACT+TGG + chr2_4:2466007-2466026 None:intergenic 35.0%
CTTGGTACACAACAAAATTG+TGG - chr2_4:2466100-2466119 Msa0308270:intron 35.0%
TTAAGACTGTCACGACAAAA+GGG + chr2_4:2466234-2466253 None:intergenic 35.0%
! TTTAAGACTGTCACGACAAA+AGG + chr2_4:2466235-2466254 None:intergenic 35.0%
TAACAAGAGAGAACCTTAGA+AGG - chr2_4:2466319-2466338 Msa0308270:intron 35.0%
TGTACATGAAAAGCCTTCTA+AGG + chr2_4:2466335-2466354 None:intergenic 35.0%
TAAGGATCAAAAAGGGATTC+TGG + chr2_4:2466381-2466400 None:intergenic 35.0%
GAGAGTCATAAGGATCAAAA+AGG + chr2_4:2466389-2466408 None:intergenic 35.0%
CACAGAAATGTGTTCTTTGA+TGG - chr2_4:2466432-2466451 Msa0308270:intron 35.0%
AGTTGGTCATGAAGTTGAAA+TGG - chr2_4:2466572-2466591 Msa0308270:intron 35.0%
!!! AAGATTTGTTTTAGGAGGGA+GGG + chr2_4:2466712-2466731 None:intergenic 35.0%
!!! AAAGATTTGTTTTAGGAGGG+AGG + chr2_4:2466713-2466732 None:intergenic 35.0%
TTGATCATGAATGCATTGGA+TGG - chr2_4:2466731-2466750 Msa0308270:CDS 35.0%
TGGTTCATAGTCTAAGTTGT+TGG + chr2_4:2466777-2466796 None:intergenic 35.0%
GGAAACATGTACATAAGTGG+TGG - chr2_4:2461610-2461629 Msa0308270:three_prime_UTR 40.0%
! TTCCATGGGAAGGTCTTTTA+AGG - chr2_4:2461639-2461658 Msa0308270:three_prime_UTR 40.0%
TTCCTTAAAAGACCTTCCCA+TGG + chr2_4:2461644-2461663 None:intergenic 40.0%
! AACAGTGTCTCTGTCTTGTT+GGG - chr2_4:2462005-2462024 Msa0308270:exon 40.0%
GTACAACACAAAGGTAGTGA+AGG + chr2_4:2462225-2462244 None:intergenic 40.0%
ACCTTTGTGTTGTACTCAGA+TGG - chr2_4:2462230-2462249 Msa0308270:intron 40.0%
TCCATCTGAGTACAACACAA+AGG + chr2_4:2462234-2462253 None:intergenic 40.0%
TTTCTCCACCTTATGGTATG+TGG - chr2_4:2462349-2462368 Msa0308270:intron 40.0%
TTCTCCACCTTATGGTATGT+GGG - chr2_4:2462350-2462369 Msa0308270:intron 40.0%
TGTTAGCAGGGATAGTACTT+TGG - chr2_4:2462384-2462403 Msa0308270:intron 40.0%
CTGTATTTGTGATGAGTCTC+TGG - chr2_4:2462528-2462547 Msa0308270:intron 40.0%
TGATGAGTCTCTGGTGAAAT+TGG - chr2_4:2462537-2462556 Msa0308270:intron 40.0%
! GGTGAAATTGGACTAGAGAA+AGG - chr2_4:2462549-2462568 Msa0308270:intron 40.0%
TCAAGAAAAAGTTGCTGGAG+AGG + chr2_4:2462661-2462680 None:intergenic 40.0%
GATCATATAATTGGGCGTGT+AGG - chr2_4:2462702-2462721 Msa0308270:intron 40.0%
!! AGCGCACTTGTTTCTTTTTC+TGG - chr2_4:2462790-2462809 Msa0308270:intron 40.0%
GCATAAACACTTGTCAGACT+GGG - chr2_4:2462965-2462984 Msa0308270:intron 40.0%
ACCATTCATGGTAGCATTTC+AGG + chr2_4:2463529-2463548 None:intergenic 40.0%
! CAGATTTTGCATAAGCGACA+TGG - chr2_4:2463869-2463888 Msa0308270:intron 40.0%
! TTTTGAATTGTGTGGTCCAG+TGG - chr2_4:2464285-2464304 Msa0308270:intron 40.0%
GACTTCACTAAAGGGTGAAA+GGG + chr2_4:2464320-2464339 None:intergenic 40.0%
GCAAGTGAGAACACAATCAT+TGG - chr2_4:2464595-2464614 Msa0308270:intron 40.0%
GTGAGAACACAATCATTGGA+TGG - chr2_4:2464599-2464618 Msa0308270:intron 40.0%
GTTGCAACTGTTTGGAAACA+AGG + chr2_4:2464813-2464832 None:intergenic 40.0%
TGTTTCCAAACAGTTGCAAC+TGG - chr2_4:2464813-2464832 Msa0308270:intron 40.0%
GACTCAATTTCGCGAGTTTA+AGG + chr2_4:2464941-2464960 None:intergenic 40.0%
TTGTAATCTCACACTAGTCC+CGG + chr2_4:2465055-2465074 None:intergenic 40.0%
!!! AGCGTGTTGCTATTTTCTTC+TGG - chr2_4:2465088-2465107 Msa0308270:CDS 40.0%
TTAGATTCTGTCAGTCTCTC+AGG - chr2_4:2465234-2465253 Msa0308270:intron 40.0%
TATCTGATTAGGTCATGCCT+TGG - chr2_4:2465380-2465399 Msa0308270:intron 40.0%
ATCTGATTAGGTCATGCCTT+GGG - chr2_4:2465381-2465400 Msa0308270:intron 40.0%
ACGTAATAAGAGGCCCAAAA+AGG + chr2_4:2465433-2465452 None:intergenic 40.0%
GGAGTAAGTCACGTAATAAG+AGG + chr2_4:2465443-2465462 None:intergenic 40.0%
TACCTATCTTGGGTGACTTA+GGG + chr2_4:2465464-2465483 None:intergenic 40.0%
CCAGAATATCCATATTTGGG+GGG + chr2_4:2465500-2465519 None:intergenic 40.0%
GCCAGAATATCCATATTTGG+GGG + chr2_4:2465501-2465520 None:intergenic 40.0%
! GGATATTCTGGCTGAATATC+TGG - chr2_4:2465509-2465528 Msa0308270:intron 40.0%
GGACCACCAATACTCAAATA+AGG + chr2_4:2465627-2465646 None:intergenic 40.0%
AACCCAGACTGTTGTTCTTT+AGG - chr2_4:2465788-2465807 Msa0308270:intron 40.0%
AGCCTAAAGAACAACAGTCT+GGG + chr2_4:2465793-2465812 None:intergenic 40.0%
AAGCCTAAAGAACAACAGTC+TGG + chr2_4:2465794-2465813 None:intergenic 40.0%
CGAAACTTGGTTAGACAACT+AGG + chr2_4:2465994-2466013 None:intergenic 40.0%
TAAGACTGTCACGACAAAAG+GGG + chr2_4:2466233-2466252 None:intergenic 40.0%
TCTGGATATTCACCGATAGT+AGG - chr2_4:2466274-2466293 Msa0308270:intron 40.0%
CTGGATATTCACCGATAGTA+GGG - chr2_4:2466275-2466294 Msa0308270:intron 40.0%
GTCTACTATGTCCCTACTAT+CGG + chr2_4:2466289-2466308 None:intergenic 40.0%
TAGTAGGGACATAGTAGACA+TGG - chr2_4:2466290-2466309 Msa0308270:intron 40.0%
AGGGATTCTGGTATGATCAA+AGG + chr2_4:2466369-2466388 None:intergenic 40.0%
GAAATGTGTTCTTTGATGGG+TGG - chr2_4:2466436-2466455 Msa0308270:intron 40.0%
GTTGAATGCAGACTTTGTTG+TGG - chr2_4:2466831-2466850 Msa0308270:five_prime_UTR 40.0%
AAGTGGTGGTTCTTCTTCCA+TGG - chr2_4:2461624-2461643 Msa0308270:three_prime_UTR 45.0%
AGTGGTGGTTCTTCTTCCAT+GGG - chr2_4:2461625-2461644 Msa0308270:three_prime_UTR 45.0%
AGACACTGTTGATCGTTGAG+TGG + chr2_4:2461995-2462014 None:intergenic 45.0%
CAACAGTGTCTCTGTCTTGT+TGG - chr2_4:2462004-2462023 Msa0308270:exon 45.0%
! ACAGTGTCTCTGTCTTGTTG+GGG - chr2_4:2462006-2462025 Msa0308270:exon 45.0%
TCTCCACCTTATGGTATGTG+GGG - chr2_4:2462351-2462370 Msa0308270:intron 45.0%
ACAATGCCCCACATACCATA+AGG + chr2_4:2462360-2462379 None:intergenic 45.0%
GGCATTGTCACATGTTAGCA+GGG - chr2_4:2462372-2462391 Msa0308270:intron 45.0%
! TGGACTAGAGAAAGGTTTCG+AGG - chr2_4:2462557-2462576 Msa0308270:intron 45.0%
!! TAGGGCATCTGATTTTCCGA+GGG - chr2_4:2462721-2462740 Msa0308270:intron 45.0%
! GATTTTCCGAGGGAATACGA+TGG - chr2_4:2462731-2462750 Msa0308270:intron 45.0%
AAAAGAAACAAGTGCGCTGC+TGG + chr2_4:2462788-2462807 None:intergenic 45.0%
TGGACAGATTGCAATCTTGC+TGG - chr2_4:2462818-2462837 Msa0308270:intron 45.0%
GGCATAAACACTTGTCAGAC+TGG - chr2_4:2462964-2462983 Msa0308270:intron 45.0%
ATGCTGTAGGTGTATGTGGA+TGG - chr2_4:2463143-2463162 Msa0308270:intron 45.0%
TGCTGTAGGTGTATGTGGAT+GGG - chr2_4:2463144-2463163 Msa0308270:intron 45.0%
AGAAGGTTGTATGCATGGAG+CGG - chr2_4:2463375-2463394 Msa0308270:intron 45.0%
GTATCGTAGAAGAGAAGACG+AGG - chr2_4:2463397-2463416 Msa0308270:intron 45.0%
CACATGACATGGTTGCAGTT+AGG + chr2_4:2463506-2463525 None:intergenic 45.0%
AGCATTTCAGGCACATGACA+TGG + chr2_4:2463517-2463536 None:intergenic 45.0%
GCCTGAAATGCTACCATGAA+TGG - chr2_4:2463525-2463544 Msa0308270:intron 45.0%
!! GCAAGAGAGAGTACCATTCA+TGG + chr2_4:2463541-2463560 None:intergenic 45.0%
! TAACAGGCACCGTAAGAAGA+GGG - chr2_4:2463928-2463947 Msa0308270:intron 45.0%
AATTGGAGTTGGGTAAGTGG+TGG + chr2_4:2464159-2464178 None:intergenic 45.0%
GGACTTCACTAAAGGGTGAA+AGG + chr2_4:2464321-2464340 None:intergenic 45.0%
! GAGCAACGGACTTCACTAAA+GGG + chr2_4:2464328-2464347 None:intergenic 45.0%
! AGAGCAACGGACTTCACTAA+AGG + chr2_4:2464329-2464348 None:intergenic 45.0%
TCCTCGCATCTAAAGAGCAA+CGG + chr2_4:2464342-2464361 None:intergenic 45.0%
TTGCTCTTTAGATGCGAGGA+AGG - chr2_4:2464342-2464361 Msa0308270:intron 45.0%
CTGACTCACGATCTTCAAAC+AGG + chr2_4:2464681-2464700 None:intergenic 45.0%
! AGATCGTGAGTCAGCATTGA+AGG - chr2_4:2464687-2464706 Msa0308270:intron 45.0%
!! GAAGGCTTAGTTTGCGTTGT+TGG - chr2_4:2464705-2464724 Msa0308270:intron 45.0%
!!! AGACTTTTTTTCGCGTCACC+AGG - chr2_4:2464734-2464753 Msa0308270:intron 45.0%
!!! TTTTTTTCGCGTCACCAGGA+TGG - chr2_4:2464738-2464757 Msa0308270:intron 45.0%
CGCAAACAAAATCTCCATCC+TGG + chr2_4:2464755-2464774 None:intergenic 45.0%
TTTGCGTCATCCACGACAAT+AGG - chr2_4:2464769-2464788 Msa0308270:intron 45.0%
TGTCACAGAACCTATTGTCG+TGG + chr2_4:2464782-2464801 None:intergenic 45.0%
CTCATCCAGTTGCAACTGTT+TGG + chr2_4:2464821-2464840 None:intergenic 45.0%
CCTCTTTATGCTTGCTCCAA+AGG + chr2_4:2464992-2465011 None:intergenic 45.0%
!! CCTTTGGAGCAAGCATAAAG+AGG - chr2_4:2464989-2465008 Msa0308270:CDS 45.0%
CTACCTATCTTGGGTGACTT+AGG + chr2_4:2465465-2465484 None:intergenic 45.0%
CGCATATATCCCCCCAAATA+TGG - chr2_4:2465488-2465507 Msa0308270:intron 45.0%
CCCCCCAAATATGGATATTC+TGG - chr2_4:2465497-2465516 Msa0308270:intron 45.0%
!! GGCCCTTATTTGAGTATTGG+TGG - chr2_4:2465621-2465640 Msa0308270:intron 45.0%
TTAACCAAGACTCATGCTCG+GGG + chr2_4:2465656-2465675 None:intergenic 45.0%
CTTAACCAAGACTCATGCTC+GGG + chr2_4:2465657-2465676 None:intergenic 45.0%
CCTTAACCAAGACTCATGCT+CGG + chr2_4:2465658-2465677 None:intergenic 45.0%
CGAGCATGAGTCTTGGTTAA+GGG - chr2_4:2465656-2465675 Msa0308270:CDS 45.0%
GTTAAGGGCGAAGTGGTTAT+TGG - chr2_4:2465671-2465690 Msa0308270:CDS 45.0%
CAACAGTCTGGGTTCATACT+CGG + chr2_4:2465782-2465801 None:intergenic 45.0%
! TTCTTTTCTGCCTCGTGTCT+TGG - chr2_4:2466082-2466101 Msa0308270:intron 45.0%
TTGTTGTGTACCAAGACACG+AGG + chr2_4:2466095-2466114 None:intergenic 45.0%
! GTGTTCTTTGATGGGTGGTT+CGG - chr2_4:2466441-2466460 Msa0308270:intron 45.0%
AACTCAAGGCTGGAATCTTC+TGG + chr2_4:2466545-2466564 None:intergenic 45.0%
ACCAACTCATCGCAAACTCA+AGG + chr2_4:2466559-2466578 None:intergenic 45.0%
!!! CATTTTTTTATTTTTTAAAA+TGG + chr2_4:2464899-2464918 None:intergenic 5.0%
GTGGTTCTTCTTCCATGGGA+AGG - chr2_4:2461629-2461648 Msa0308270:three_prime_UTR 50.0%
ATGCCCCACATACCATAAGG+TGG + chr2_4:2462357-2462376 None:intergenic 50.0%
! GGGCATTGTCACATGTTAGC+AGG - chr2_4:2462371-2462390 Msa0308270:intron 50.0%
!! GTAGGGCATCTGATTTTCCG+AGG - chr2_4:2462720-2462739 Msa0308270:intron 50.0%
CCACATACACCTACAGCATG+AGG + chr2_4:2463142-2463161 None:intergenic 50.0%
CCTCATGCTGTAGGTGTATG+TGG - chr2_4:2463139-2463158 Msa0308270:intron 50.0%
!! AAGAGGTGTCACTGATGCTG+AGG - chr2_4:2463343-2463362 Msa0308270:intron 50.0%
CTCTTCTTACGGTGCCTGTT+AGG + chr2_4:2463929-2463948 None:intergenic 50.0%
! CTAACAGGCACCGTAAGAAG+AGG - chr2_4:2463927-2463946 Msa0308270:intron 50.0%
GAAAGGGCAATGATCACCAC+TGG + chr2_4:2464304-2464323 None:intergenic 50.0%
TCCGTTGCTCTTTAGATGCG+AGG - chr2_4:2464338-2464357 Msa0308270:intron 50.0%
CTGCTCGCTCGAAATAGAGA+GGG - chr2_4:2464653-2464672 Msa0308270:intron 50.0%
TGCTCGCTCGAAATAGAGAG+GGG - chr2_4:2464654-2464673 Msa0308270:intron 50.0%
TTTGATGCATGGTAGGGGCA+AGG + chr2_4:2465290-2465309 None:intergenic 50.0%
ATGCCTTGGGAATGATCCCA+AGG - chr2_4:2465394-2465413 Msa0308270:intron 50.0%
TGCCTTGGGAATGATCCCAA+GGG - chr2_4:2465395-2465414 Msa0308270:intron 50.0%
CTCCCTAAGTCACCCAAGAT+AGG - chr2_4:2465459-2465478 Msa0308270:intron 50.0%
! AGGTTCGGGCTTGATGGTTT+CGG - chr2_4:2465537-2465556 Msa0308270:intron 50.0%
! CTTGATGGTTTCGGGGGATA+AGG - chr2_4:2465546-2465565 Msa0308270:intron 50.0%
ATGGTTTCGGGGGATAAGGA+GGG - chr2_4:2465550-2465569 Msa0308270:intron 50.0%
GTAGGCGACGTCCTTGTATA+GGG - chr2_4:2465592-2465611 Msa0308270:CDS 50.0%
ACGTCCTTGTATAGGGCTAG+CGG - chr2_4:2465599-2465618 Msa0308270:intron 50.0%
! GCGGGCCCTTATTTGAGTAT+TGG - chr2_4:2465618-2465637 Msa0308270:intron 50.0%
TAACCAAGACTCATGCTCGG+GGG + chr2_4:2465655-2465674 None:intergenic 50.0%
CCGAGCATGAGTCTTGGTTA+AGG - chr2_4:2465655-2465674 Msa0308270:CDS 50.0%
AGTCTTGGTTAAGGGCGAAG+TGG - chr2_4:2465664-2465683 Msa0308270:CDS 50.0%
AAGGGCGAAGTGGTTATTGG+CGG - chr2_4:2465674-2465693 Msa0308270:CDS 50.0%
AAGTGGTTATTGGCGGTCCA+GGG - chr2_4:2465681-2465700 Msa0308270:CDS 50.0%
! TCTTTGATGGGTGGTTCGGA+TGG - chr2_4:2466445-2466464 Msa0308270:intron 50.0%
! CTGGAATCTTCTGGAAGACG+TGG + chr2_4:2466536-2466555 None:intergenic 50.0%
ACTCATCGCAAACTCAAGGC+TGG + chr2_4:2466555-2466574 None:intergenic 50.0%
GCCTTGAGTTTGCGATGAGT+TGG - chr2_4:2466555-2466574 Msa0308270:intron 50.0%
CACGCACCATCGTATTCCCT+CGG + chr2_4:2462740-2462759 None:intergenic 55.0%
TGCAATCTTGCTGGAGCCCT+TGG - chr2_4:2462827-2462846 Msa0308270:intron 55.0%
ATGCGAGGAAGGAGCAAGCA+AGG - chr2_4:2464353-2464372 Msa0308270:intron 55.0%
CGAGCGAGCAGCAAACTGAA+CGG + chr2_4:2464644-2464663 None:intergenic 55.0%
GCTGCTCGCTCGAAATAGAG+AGG - chr2_4:2464652-2464671 Msa0308270:intron 55.0%
CTCCCTTGGGATCATTCCCA+AGG + chr2_4:2465400-2465419 None:intergenic 55.0%
! GGTTCGGGCTTGATGGTTTC+GGG - chr2_4:2465538-2465557 Msa0308270:intron 55.0%
! GTTCGGGCTTGATGGTTTCG+GGG - chr2_4:2465539-2465558 Msa0308270:intron 55.0%
! TTCGGGCTTGATGGTTTCGG+GGG - chr2_4:2465540-2465559 Msa0308270:intron 55.0%
GATGGTTTCGGGGGATAAGG+AGG - chr2_4:2465549-2465568 Msa0308270:intron 55.0%
TGGTTTCGGGGGATAAGGAG+GGG - chr2_4:2465551-2465570 Msa0308270:intron 55.0%
CGTAGGCGACGTCCTTGTAT+AGG - chr2_4:2465591-2465610 Msa0308270:CDS 55.0%
! CGTCCTTGTATAGGGCTAGC+GGG - chr2_4:2465600-2465619 Msa0308270:intron 55.0%
GAAGTGGTTATTGGCGGTCC+AGG - chr2_4:2465680-2465699 Msa0308270:CDS 55.0%
GCGGTCCAGGGTTCATTTGT+AGG - chr2_4:2465693-2465712 Msa0308270:CDS 55.0%
GAGTAAACTCGGGCGATCTC+TGG - chr2_4:2466256-2466275 Msa0308270:intron 55.0%
AGCATGCCCTACGCAAGCGT+AGG - chr2_4:2465574-2465593 Msa0308270:CDS 60.0%
ACGTCGCCTACGCTTGCGTA+GGG + chr2_4:2465583-2465602 None:intergenic 60.0%
AGTCCCCCGAGCATGAGTCT+TGG - chr2_4:2465649-2465668 Msa0308270:CDS 60.0%
GACGTCGCCTACGCTTGCGT+AGG + chr2_4:2465584-2465603 None:intergenic 65.0%
GGGCCCGCTAGCCCTATACA+AGG + chr2_4:2465606-2465625 None:intergenic 65.0%
GACTCATGCTCGGGGGACTG+TGG + chr2_4:2465648-2465667 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 2461536 2466902 2461536 ID=Msa0308270;Name=Msa0308270
chr2_4 mRNA 2461536 2466902 2461536 ID=Msa0308270-mRNA-1;Parent=Msa0308270;Name=Msa0308270-mRNA-1;_AED=0.14;_eAED=0.14;_QI=80|0.25|0.4|1|0.25|0.4|5|483|212
chr2_4 exon 2461536 2462229 2461536 ID=Msa0308270-mRNA-1:exon:626;Parent=Msa0308270-mRNA-1
chr2_4 exon 2464916 2465126 2464916 ID=Msa0308270-mRNA-1:exon:625;Parent=Msa0308270-mRNA-1
chr2_4 exon 2465564 2465613 2465564 ID=Msa0308270-mRNA-1:exon:624;Parent=Msa0308270-mRNA-1
chr2_4 exon 2465640 2465714 2465640 ID=Msa0308270-mRNA-1:exon:623;Parent=Msa0308270-mRNA-1
chr2_4 exon 2466731 2466902 2466731 ID=Msa0308270-mRNA-1:exon:622;Parent=Msa0308270-mRNA-1
chr2_4 five_prime_UTR 2466823 2466902 2466823 ID=Msa0308270-mRNA-1:five_prime_utr;Parent=Msa0308270-mRNA-1
chr2_4 CDS 2466731 2466822 2466731 ID=Msa0308270-mRNA-1:cds;Parent=Msa0308270-mRNA-1
chr2_4 CDS 2465640 2465714 2465640 ID=Msa0308270-mRNA-1:cds;Parent=Msa0308270-mRNA-1
chr2_4 CDS 2465564 2465613 2465564 ID=Msa0308270-mRNA-1:cds;Parent=Msa0308270-mRNA-1
chr2_4 CDS 2464916 2465126 2464916 ID=Msa0308270-mRNA-1:cds;Parent=Msa0308270-mRNA-1
chr2_4 CDS 2462019 2462229 2462019 ID=Msa0308270-mRNA-1:cds;Parent=Msa0308270-mRNA-1
chr2_4 three_prime_UTR 2461536 2462018 2461536 ID=Msa0308270-mRNA-1:three_prime_utr;Parent=Msa0308270-mRNA-1
Gene Sequence

>Msa0308270

ATGTACATAAGTGGTGGTTCTTCTTCCATGGGAAGGTCTTTTAAGGAATCTCTTAAACTGCTTGAAGCTGATATTCATCATGCCAATACCTTGGCATCTGATTTTCCGAGGGAATACGATGGTGCGTGTCTTCAGATGAGAATGTCATACAGTCCAGCAGCGCACTTATTGCAATCTTGCTGGAGCCCTTGGATTATTAAGAATTCTAATTTACAAGCGGTCATATATCCGTCTTTGTTACAACTTGAAAGAGGTGTCACTGATGCTGAGGATAAAAAACAGAAGGTTGTATGCATGGAGCGGTATCGTAGAAGAGAAGACGAGGAGCACAAACAATTCTCAGACATAGACTTTGAAAGAGAAGAAGAGTGTGGAATATGTATGGAGATGAATAGCAAGATTGTGTTGCCTAACTGCAACCATGTCATGAGAGCAAGATCACAGTCATGCCCCTTTTGTCGTGACAGTCTTAAAAGAGTAAACTCGGGCGATCTCTGGATATTCACCGATAGTAGGGACATAGTAGACATGGAAACAGTAACAAGAGAGAACCTTAGAAGGCTTTTCATGTACATAGATAAGTTACCTTTGATCATACCAGAATCCCTTTTTGATCCTTATGACTCTCACTTAAGATAA
Protein sequence

>Msa0308270

MYISGGSSSMGRSFKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLLQSCWSPWIIKNSNLQAVIYPSLLQLERGVTDAEDKKQKVVCMERYRRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMRARSQSCPFCRDSLKRVNSGDLWIFTDSRDIVDMETVTRENLRRLFMYIDKLPLIIPESLFDPYDSHLR*