Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424980 | sp|Q9SUW1|GT19_ARATH | 68.675 | 415 | 122 | 2 | 33 | 447 | 29 | 435 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424980 | G7JLG7 | 97.363 | 455 | 11 | 1 | 1 | 454 | 1 | 455 | 0.0 | 920 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035120 | Msa1424980 | 0.804598 | 2.000392e-49 | -8.615850e-47 |
| Msa0106620 | Msa1424980 | 0.820005 | 8.620612e-53 | -8.615850e-47 |
| Msa1418240 | Msa1424980 | 0.818821 | 1.604852e-52 | -8.615850e-47 |
| Msa1424980 | Msa1447180 | 0.801369 | 9.303874e-49 | -8.615850e-47 |
| Msa1424980 | Msa1461540 | 0.812873 | 3.405823e-51 | -8.615850e-47 |
| Msa0630940 | Msa1424980 | 0.825554 | 4.400411e-54 | -8.615850e-47 |
| Msa0664540 | Msa1424980 | 0.809636 | 1.716028e-50 | -8.615850e-47 |
| Msa0669180 | Msa1424980 | 0.825325 | 4.986159e-54 | -8.615850e-47 |
| Msa0692880 | Msa1424980 | 0.829368 | 5.354553e-55 | -8.615850e-47 |
| Msa0231190 | Msa1424980 | 0.815078 | 1.111618e-51 | -8.615850e-47 |
| Msa1043330 | Msa1424980 | 0.801891 | 7.268800e-49 | -8.615850e-47 |
| Msa0241830 | Msa1424980 | 0.812478 | 4.154630e-51 | -8.615850e-47 |
| Msa0279850 | Msa1424980 | 0.802900 | 4.504455e-49 | -8.615850e-47 |
| Msa0322900 | Msa1424980 | 0.834277 | 3.289676e-56 | -8.615850e-47 |
| Msa0485240 | Msa1424980 | 0.814493 | 1.497816e-51 | -8.615850e-47 |
| Msa0518030 | Msa1424980 | 0.815712 | 8.030957e-52 | -8.615850e-47 |
| Msa0534400 | Msa1424980 | 0.826958 | 2.038244e-54 | -8.615850e-47 |
| Msa0556010 | Msa1424980 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
| Msa0581690 | Msa1424980 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0590640 | Msa1424980 | 0.805161 | 1.525882e-49 | -8.615850e-47 |
| Msa0881350 | Msa1424980 | 0.804273 | 2.338283e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424980 | MtrunA17_Chr4g0067281 | 97.363 | 455 | 11 | 1 | 1 | 454 | 1 | 455 | 0.0 | 920 |
| Msa1424980 | MtrunA17_Chr7g0262171 | 38.278 | 418 | 233 | 10 | 31 | 443 | 69 | 466 | 1.45e-85 | 272 |
| Msa1424980 | MtrunA17_Chr3g0121901 | 37.972 | 424 | 227 | 11 | 35 | 445 | 58 | 458 | 9.59e-85 | 268 |
| Msa1424980 | MtrunA17_Chr1g0183211 | 37.123 | 431 | 239 | 11 | 18 | 443 | 138 | 541 | 2.81e-83 | 268 |
| Msa1424980 | MtrunA17_Chr5g0423071 | 38.609 | 417 | 216 | 11 | 41 | 443 | 98 | 488 | 1.43e-82 | 263 |
| Msa1424980 | MtrunA17_Chr4g0073401 | 37.500 | 440 | 239 | 11 | 20 | 445 | 95 | 512 | 8.10e-81 | 259 |
| Msa1424980 | MtrunA17_Chr5g0446621 | 35.377 | 424 | 241 | 8 | 41 | 452 | 94 | 496 | 2.84e-77 | 249 |
| Msa1424980 | MtrunA17_Chr5g0397581 | 31.532 | 444 | 275 | 9 | 2 | 443 | 126 | 542 | 4.33e-75 | 245 |
| Msa1424980 | MtrunA17_Chr3g0078741 | 33.705 | 448 | 238 | 10 | 18 | 450 | 43 | 446 | 1.43e-72 | 236 |
| Msa1424980 | MtrunA17_Chr1g0163321 | 36.207 | 406 | 231 | 12 | 47 | 448 | 85 | 466 | 1.94e-72 | 236 |
| Msa1424980 | MtrunA17_Chr5g0397571 | 32.667 | 450 | 273 | 10 | 2 | 449 | 102 | 523 | 3.95e-72 | 236 |
| Msa1424980 | MtrunA17_Chr1g0163331 | 36.020 | 397 | 226 | 10 | 46 | 438 | 77 | 449 | 6.12e-72 | 234 |
| Msa1424980 | MtrunA17_Chr5g0446631 | 27.232 | 448 | 230 | 14 | 18 | 450 | 3 | 369 | 1.85e-41 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1424980 | AT4G22580.1 | 68.675 | 415 | 122 | 2 | 33 | 447 | 29 | 435 | 0.0 | 599 |
| Msa1424980 | AT4G13990.2 | 39.614 | 414 | 221 | 9 | 38 | 443 | 92 | 484 | 1.80e-91 | 287 |
| Msa1424980 | AT4G13990.1 | 39.614 | 414 | 221 | 9 | 38 | 443 | 92 | 484 | 1.80e-91 | 287 |
| Msa1424980 | AT2G29040.1 | 38.208 | 424 | 237 | 9 | 33 | 449 | 291 | 696 | 7.85e-90 | 288 |
| Msa1424980 | AT2G32750.2 | 36.136 | 440 | 243 | 13 | 20 | 443 | 59 | 476 | 4.01e-86 | 273 |
| Msa1424980 | AT2G32750.1 | 36.136 | 440 | 243 | 13 | 20 | 443 | 57 | 474 | 6.41e-86 | 272 |
| Msa1424980 | AT2G31990.1 | 37.767 | 421 | 232 | 11 | 35 | 443 | 66 | 468 | 3.09e-84 | 267 |
| Msa1424980 | AT2G31990.3 | 37.767 | 421 | 232 | 11 | 35 | 443 | 74 | 476 | 5.29e-84 | 266 |
| Msa1424980 | AT2G31990.2 | 37.767 | 421 | 232 | 11 | 35 | 443 | 112 | 514 | 9.21e-84 | 267 |
| Msa1424980 | AT2G20370.1 | 37.440 | 414 | 233 | 11 | 41 | 449 | 151 | 543 | 1.74e-82 | 266 |
| Msa1424980 | AT5G62220.1 | 35.252 | 417 | 241 | 7 | 38 | 446 | 115 | 510 | 5.01e-79 | 254 |
| Msa1424980 | AT2G32740.1 | 34.076 | 449 | 254 | 14 | 12 | 443 | 37 | 460 | 7.40e-78 | 250 |
| Msa1424980 | AT5G41250.1 | 33.827 | 405 | 241 | 9 | 41 | 443 | 177 | 556 | 6.57e-75 | 245 |
| Msa1424980 | AT1G63450.1 | 33.911 | 404 | 244 | 7 | 41 | 443 | 279 | 660 | 4.17e-72 | 240 |
| Msa1424980 | AT1G68470.1 | 32.045 | 440 | 263 | 12 | 13 | 447 | 43 | 451 | 5.59e-71 | 232 |
Find 106 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATACTCCGCCGGATATT+TGG | 0.193332 | tig0025808:-48825 | None:intergenic |
| ATTGGTTTCATAAACCTAAT+TGG | 0.213187 | tig0025808:-48957 | None:intergenic |
| GAATGACGGTTCCATATTTC+AGG | 0.213906 | tig0025808:-48510 | None:intergenic |
| GATTCTCTCCGTTATCTTTA+CGG | 0.217974 | tig0025808:+48420 | Msa1424980:CDS |
| AGTAGATCTAGGTTGAATTT+TGG | 0.239963 | tig0025808:-48180 | None:intergenic |
| GAGAATGAGGGAGAAAGTTT+TGG | 0.240822 | tig0025808:+49226 | Msa1424980:CDS |
| AAGAAAATCACCCTGAAATA+TGG | 0.260817 | tig0025808:+48499 | Msa1424980:CDS |
| GGTCGGTTCGGTACCAACTA+TGG | 0.275660 | tig0025808:-48290 | None:intergenic |
| TGGATAATGATCCTCATCTT+TGG | 0.279722 | tig0025808:+48589 | Msa1424980:CDS |
| ACCAACTATGGGAACGGTTA+TGG | 0.308107 | tig0025808:-48278 | None:intergenic |
| GGATAATGATCCTCATCTTT+GGG | 0.312571 | tig0025808:+48590 | Msa1424980:CDS |
| TGATTCCTGGAGTTGTTTAT+AGG | 0.323772 | tig0025808:+49252 | Msa1424980:CDS |
| GCAGTATTCGTGGCATTTAC+CGG | 0.328562 | tig0025808:+49097 | Msa1424980:CDS |
| CCAACTATGGGAACGGTTAT+GGG | 0.331615 | tig0025808:-48277 | None:intergenic |
| TAGGCTTCAAGAACTTGATT+TGG | 0.343749 | tig0025808:+49358 | Msa1424980:CDS |
| GAAACTGTTGATTGTTCTAA+TGG | 0.345989 | tig0025808:+48918 | Msa1424980:CDS |
| TGTTCACTGGAGTTATATTC+AGG | 0.365262 | tig0025808:-48444 | None:intergenic |
| AATGTGAATGGGAATTCATT+TGG | 0.374128 | tig0025808:+48879 | Msa1424980:CDS |
| TTGGGATTTCTCTCAGCCTT+TGG | 0.379568 | tig0025808:+48569 | Msa1424980:CDS |
| TTGTTATGGCCCGACCCGCT+TGG | 0.380292 | tig0025808:+48550 | Msa1424980:CDS |
| TGAAATATGGAACCGTCATT+CGG | 0.384570 | tig0025808:+48512 | Msa1424980:CDS |
| GAGGAGGAAGATAGTGATGA+TGG | 0.390746 | tig0025808:-48061 | None:intergenic |
| TACTTAGCAAACCACGGTTT+GGG | 0.399109 | tig0025808:+48246 | Msa1424980:CDS |
| TGTTATGGCCCGACCCGCTT+GGG | 0.405707 | tig0025808:+48551 | Msa1424980:CDS |
| TTTGTGAGCATGATCCAATT+AGG | 0.409212 | tig0025808:+48943 | Msa1424980:CDS |
| AGAGAAATCCCAAGCGGGTC+GGG | 0.410850 | tig0025808:-48559 | None:intergenic |
| ATCTAGCGTTGTTGGATTCG+TGG | 0.415701 | tig0025808:+48730 | Msa1424980:CDS |
| TAATGTAACCGCGTTAACTT+TGG | 0.420643 | tig0025808:+48644 | Msa1424980:CDS |
| TTTAACAATCGACGGTACTT+TGG | 0.421402 | tig0025808:+49322 | Msa1424980:CDS |
| TTTCTGCTACGCCAAATATC+CGG | 0.426952 | tig0025808:+48814 | Msa1424980:CDS |
| TTACTTAGCAAACCACGGTT+TGG | 0.429313 | tig0025808:+48245 | Msa1424980:CDS |
| GAAATATGGAACCGTCATTC+GGG | 0.432157 | tig0025808:+48513 | Msa1424980:CDS |
| GGATGAAACGACGTTGGATA+AGG | 0.439139 | tig0025808:-48702 | None:intergenic |
| TCCACCGAATCTAGCGTTGT+TGG | 0.444512 | tig0025808:+48722 | Msa1424980:CDS |
| TAGGTTTATGAAACCAATGT+TGG | 0.446642 | tig0025808:+48962 | Msa1424980:CDS |
| CTTTGGATAAGATTCGATCT+AGG | 0.452162 | tig0025808:+49339 | Msa1424980:CDS |
| TGGAATCTCGTGCTTGGCCG+TGG | 0.453321 | tig0025808:+48664 | Msa1424980:CDS |
| AAGAGCAAGAGAAGATCTCT+TGG | 0.457230 | tig0025808:-48772 | None:intergenic |
| AGGAAGCATAATAGTTCTCC+TGG | 0.459426 | tig0025808:+49272 | Msa1424980:CDS |
| CCCATAACCGTTCCCATAGT+TGG | 0.463878 | tig0025808:+48277 | Msa1424980:CDS |
| TGCAAGAATCGCGTCAAAAG+TGG | 0.464262 | tig0025808:-49033 | None:intergenic |
| AACAATAGCAGTAATGTGAA+TGG | 0.464376 | tig0025808:+48867 | Msa1424980:CDS |
| GAATCCAACAACGCTAGATT+CGG | 0.468029 | tig0025808:-48726 | None:intergenic |
| TTGAAAACAACATCCTCCTT+AGG | 0.471381 | tig0025808:-49152 | None:intergenic |
| GAATCAAAGGCAGCGTAGTA+AGG | 0.474977 | tig0025808:-48402 | None:intergenic |
| GTTAGAATATCCATGCTTAA+CGG | 0.477590 | tig0025808:+48347 | Msa1424980:CDS |
| AACAATTTGAGAGTAGATCT+AGG | 0.479430 | tig0025808:-48191 | None:intergenic |
| TCCTGGTTTGAGAAATAAGA+AGG | 0.481589 | tig0025808:+49289 | Msa1424980:CDS |
| GAATACCTAGAGCTAGGGTT+AGG | 0.482401 | tig0025808:+49204 | Msa1424980:CDS |
| TAACTTTGGAATCTCGTGCT+TGG | 0.483729 | tig0025808:+48658 | Msa1424980:CDS |
| AAACTATCAAATTCAATCTC+CGG | 0.484033 | tig0025808:-49116 | None:intergenic |
| CAGAAATTTGCACCCAACAT+TGG | 0.489289 | tig0025808:-48975 | None:intergenic |
| AGGTTTATGAAACCAATGTT+GGG | 0.491816 | tig0025808:+48963 | Msa1424980:CDS |
| ATGAACACCGTGTTGTTCAC+TGG | 0.496549 | tig0025808:-48457 | None:intergenic |
| GAAGATAGTGATGATGGAGA+TGG | 0.504939 | tig0025808:-48055 | None:intergenic |
| ACAATAGCAGTAATGTGAAT+GGG | 0.507436 | tig0025808:+48868 | Msa1424980:CDS |
| GAGCTAGGGTTAGGAGAATG+AGG | 0.508653 | tig0025808:+49213 | Msa1424980:CDS |
| TATCCGGCGGAGTATAAGAA+TGG | 0.511989 | tig0025808:+48830 | Msa1424980:CDS |
| TCCTTCTTATTTCTCAAACC+AGG | 0.512916 | tig0025808:-49290 | None:intergenic |
| AAACCGTGGTTTGCTAAGTA+AGG | 0.519190 | tig0025808:-48243 | None:intergenic |
| CAAGCATGGATGGGTCGGTT+CGG | 0.522247 | tig0025808:-48302 | None:intergenic |
| TGCTTCCTATAAACAACTCC+AGG | 0.522766 | tig0025808:-49257 | None:intergenic |
| CGGATTTGGTTGGATTCAAG+AGG | 0.523835 | tig0025808:-48080 | None:intergenic |
| AAAATGAGTTCAAGCATGGA+TGG | 0.536172 | tig0025808:-48312 | None:intergenic |
| GCATTTGATTTAACAATCGA+CGG | 0.546377 | tig0025808:+49314 | Msa1424980:CDS |
| ATTCAGGACCGTAAAGATAA+CGG | 0.546502 | tig0025808:-48428 | None:intergenic |
| AATGACGGTTCCATATTTCA+GGG | 0.548354 | tig0025808:-48509 | None:intergenic |
| AGCATGGATATTCTAACATA+CGG | 0.550288 | tig0025808:-48341 | None:intergenic |
| TGCAGAGAATACCTAGAGCT+AGG | 0.553397 | tig0025808:+49198 | Msa1424980:CDS |
| TTCTGTTACTATACCTAAGG+AGG | 0.554561 | tig0025808:+49139 | Msa1424980:CDS |
| ATTCCATTCTTATACTCCGC+CGG | 0.557044 | tig0025808:-48833 | None:intergenic |
| TTAGGATCTTCCGTTAAGCA+TGG | 0.563213 | tig0025808:-48357 | None:intergenic |
| GATAATGATCCTCATCTTTG+GGG | 0.563491 | tig0025808:+48591 | Msa1424980:CDS |
| ATTCTCCTAACCCTAGCTCT+AGG | 0.569970 | tig0025808:-49209 | None:intergenic |
| AGTAAGGACATAAATCGTCT+AGG | 0.570315 | tig0025808:-48227 | None:intergenic |
| AGGAAGATAAACTGCGTTAG+CGG | 0.574038 | tig0025808:-48382 | None:intergenic |
| AATTTCTGTTTACAACCACC+AGG | 0.574716 | tig0025808:+48990 | Msa1424980:CDS |
| AAGATAACGGAGAGAATCAA+AGG | 0.575689 | tig0025808:-48415 | None:intergenic |
| GTCGGTTCGGTACCAACTAT+GGG | 0.577292 | tig0025808:-48289 | None:intergenic |
| TCCAACAACGCTAGATTCGG+TGG | 0.582112 | tig0025808:-48723 | None:intergenic |
| GCAGAGAATACCTAGAGCTA+GGG | 0.583042 | tig0025808:+49199 | Msa1424980:CDS |
| GAGTTCAAGCATGGATGGGT+CGG | 0.586601 | tig0025808:-48307 | None:intergenic |
| AAAATGAGTGCGAACAACGT+TGG | 0.589102 | tig0025808:+48136 | Msa1424980:CDS |
| GAGAGAAATCCCAAGCGGGT+CGG | 0.590735 | tig0025808:-48560 | None:intergenic |
| GGCTGAGAGAAATCCCAAGC+GGG | 0.599255 | tig0025808:-48564 | None:intergenic |
| ATGGAAAATGAGTTCAAGCA+TGG | 0.601996 | tig0025808:-48316 | None:intergenic |
| TCAAAAGTGGATTTACGCGT+AGG | 0.603942 | tig0025808:-49020 | None:intergenic |
| AACGAAGTTCCCCAAAGATG+AGG | 0.606107 | tig0025808:-48600 | None:intergenic |
| ATTTGGTTGGATTCAAGAGG+AGG | 0.608161 | tig0025808:-48077 | None:intergenic |
| AAATGAGTTCAAGCATGGAT+GGG | 0.612671 | tig0025808:-48311 | None:intergenic |
| AATGATCATGACCCGAATGA+CGG | 0.613212 | tig0025808:-48524 | None:intergenic |
| AGCTAGGGTTAGGAGAATGA+GGG | 0.619880 | tig0025808:+49214 | Msa1424980:CDS |
| TTCGGTGGATGAAACGACGT+TGG | 0.620909 | tig0025808:-48708 | None:intergenic |
| TTCGGTACCAACTATGGGAA+CGG | 0.621276 | tig0025808:-48284 | None:intergenic |
| GGAACAGCATGTTCTTGCCA+CGG | 0.628694 | tig0025808:-48681 | None:intergenic |
| GATATTCTAACATACGGCGA+TGG | 0.630625 | tig0025808:-48335 | None:intergenic |
| CGCGTAGGAGTATCCCCTGG+TGG | 0.639296 | tig0025808:-49005 | None:intergenic |
| AGATGAGGATCATTATCCAA+AGG | 0.639572 | tig0025808:-48585 | None:intergenic |
| TTTCTGTTTACAACCACCAG+GGG | 0.640332 | tig0025808:+48992 | Msa1424980:CDS |
| TGTCCTTACTTAGCAAACCA+CGG | 0.646035 | tig0025808:+48240 | Msa1424980:CDS |
| CTGCTACGCCAAATATCCGG+CGG | 0.662754 | tig0025808:+48817 | Msa1424980:CDS |
| ATTTCTGTTTACAACCACCA+GGG | 0.682776 | tig0025808:+48991 | Msa1424980:CDS |
| GAGATGGAGATGTAGATGTG+TGG | 0.694825 | tig0025808:-48039 | None:intergenic |
| ACGAGATTCCAAAGTTAACG+CGG | 0.729351 | tig0025808:-48652 | None:intergenic |
| TATAACTCCAGTGAACAACA+CGG | 0.729772 | tig0025808:+48450 | Msa1424980:CDS |
| AGGCTGAGAGAAATCCCAAG+CGG | 0.735314 | tig0025808:-48565 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAGTTTTCATTTTCTT+CGG | - | tig0025808:48103-48122 | None:intergenic | 15.0% |
| !!! | TTTAAAGTTTTCATTTTCTT+CGG | - | tig0025808:48103-48122 | None:intergenic | 15.0% |
| !! | TCATGATCATTTTCTTGTTA+TGG | + | tig0025808:48536-48555 | Msa1424980:CDS | 25.0% |
| !! | ATTGGTTTCATAAACCTAAT+TGG | - | tig0025808:48960-48979 | None:intergenic | 25.0% |
| ! | AAACTATCAAATTCAATCTC+CGG | - | tig0025808:49119-49138 | None:intergenic | 25.0% |
| !! | TTTTTCTGTTACTATACCTA+AGG | + | tig0025808:49136-49155 | Msa1424980:CDS | 25.0% |
| !! | TCATGATCATTTTCTTGTTA+TGG | + | tig0025808:48536-48555 | Msa1424980:CDS | 25.0% |
| !! | ATTGGTTTCATAAACCTAAT+TGG | - | tig0025808:48960-48979 | None:intergenic | 25.0% |
| ! | AAACTATCAAATTCAATCTC+CGG | - | tig0025808:49119-49138 | None:intergenic | 25.0% |
| !! | TTTTTCTGTTACTATACCTA+AGG | + | tig0025808:49136-49155 | Msa1424980:CDS | 25.0% |
| ! | GTTTTCATTTTCTTCGGATT+TGG | - | tig0025808:48097-48116 | None:intergenic | 30.0% |
| !! | AGTAGATCTAGGTTGAATTT+TGG | - | tig0025808:48183-48202 | None:intergenic | 30.0% |
| AACAATTTGAGAGTAGATCT+AGG | - | tig0025808:48194-48213 | None:intergenic | 30.0% | |
| AGCATGGATATTCTAACATA+CGG | - | tig0025808:48344-48363 | None:intergenic | 30.0% | |
| GTTAGAATATCCATGCTTAA+CGG | + | tig0025808:48347-48366 | Msa1424980:CDS | 30.0% | |
| ! | TATTTCAGGGTGATTTTCTT+TGG | - | tig0025808:48499-48518 | None:intergenic | 30.0% |
| AAGAAAATCACCCTGAAATA+TGG | + | tig0025808:48499-48518 | Msa1424980:CDS | 30.0% | |
| AACAATAGCAGTAATGTGAA+TGG | + | tig0025808:48867-48886 | Msa1424980:CDS | 30.0% | |
| ACAATAGCAGTAATGTGAAT+GGG | + | tig0025808:48868-48887 | Msa1424980:CDS | 30.0% | |
| AATGTGAATGGGAATTCATT+TGG | + | tig0025808:48879-48898 | Msa1424980:CDS | 30.0% | |
| ! | GAAACTGTTGATTGTTCTAA+TGG | + | tig0025808:48918-48937 | Msa1424980:CDS | 30.0% |
| TAGGTTTATGAAACCAATGT+TGG | + | tig0025808:48962-48981 | Msa1424980:CDS | 30.0% | |
| AGGTTTATGAAACCAATGTT+GGG | + | tig0025808:48963-48982 | Msa1424980:CDS | 30.0% | |
| ! | GCATTTGATTTAACAATCGA+CGG | + | tig0025808:49314-49333 | Msa1424980:CDS | 30.0% |
| ! | GTTTTCATTTTCTTCGGATT+TGG | - | tig0025808:48097-48116 | None:intergenic | 30.0% |
| !! | AGTAGATCTAGGTTGAATTT+TGG | - | tig0025808:48183-48202 | None:intergenic | 30.0% |
| AACAATTTGAGAGTAGATCT+AGG | - | tig0025808:48194-48213 | None:intergenic | 30.0% | |
| AGCATGGATATTCTAACATA+CGG | - | tig0025808:48344-48363 | None:intergenic | 30.0% | |
| GTTAGAATATCCATGCTTAA+CGG | + | tig0025808:48347-48366 | Msa1424980:CDS | 30.0% | |
| ! | TATTTCAGGGTGATTTTCTT+TGG | - | tig0025808:48499-48518 | None:intergenic | 30.0% |
| AAGAAAATCACCCTGAAATA+TGG | + | tig0025808:48499-48518 | Msa1424980:CDS | 30.0% | |
| AACAATAGCAGTAATGTGAA+TGG | + | tig0025808:48867-48886 | Msa1424980:CDS | 30.0% | |
| ACAATAGCAGTAATGTGAAT+GGG | + | tig0025808:48868-48887 | Msa1424980:CDS | 30.0% | |
| AATGTGAATGGGAATTCATT+TGG | + | tig0025808:48879-48898 | Msa1424980:CDS | 30.0% | |
| ! | GAAACTGTTGATTGTTCTAA+TGG | + | tig0025808:48918-48937 | Msa1424980:CDS | 30.0% |
| TAGGTTTATGAAACCAATGT+TGG | + | tig0025808:48962-48981 | Msa1424980:CDS | 30.0% | |
| AGGTTTATGAAACCAATGTT+GGG | + | tig0025808:48963-48982 | Msa1424980:CDS | 30.0% | |
| ! | GCATTTGATTTAACAATCGA+CGG | + | tig0025808:49314-49333 | Msa1424980:CDS | 30.0% |
| !!! | ATGTAGATGTGTGGTTTTGA+TGG | - | tig0025808:48033-48052 | None:intergenic | 35.0% |
| !! | TCATTTTCTTCGGATTTGGT+TGG | - | tig0025808:48093-48112 | None:intergenic | 35.0% |
| !! | TTGGTGGTAGTTTTCTTATG+TGG | - | tig0025808:48164-48183 | None:intergenic | 35.0% |
| !! | AGATCTAGGTTGAATTTTGG+TGG | - | tig0025808:48180-48199 | None:intergenic | 35.0% |
| AGTAAGGACATAAATCGTCT+AGG | - | tig0025808:48230-48249 | None:intergenic | 35.0% | |
| AAATGAGTTCAAGCATGGAT+GGG | - | tig0025808:48314-48333 | None:intergenic | 35.0% | |
| AAAATGAGTTCAAGCATGGA+TGG | - | tig0025808:48315-48334 | None:intergenic | 35.0% | |
| ATGGAAAATGAGTTCAAGCA+TGG | - | tig0025808:48319-48338 | None:intergenic | 35.0% | |
| !! | AAGATAACGGAGAGAATCAA+AGG | - | tig0025808:48418-48437 | None:intergenic | 35.0% |
| GATTCTCTCCGTTATCTTTA+CGG | + | tig0025808:48420-48439 | Msa1424980:CDS | 35.0% | |
| ATTCAGGACCGTAAAGATAA+CGG | - | tig0025808:48431-48450 | None:intergenic | 35.0% | |
| TGTTCACTGGAGTTATATTC+AGG | - | tig0025808:48447-48466 | None:intergenic | 35.0% | |
| TATAACTCCAGTGAACAACA+CGG | + | tig0025808:48450-48469 | Msa1424980:CDS | 35.0% | |
| AATGACGGTTCCATATTTCA+GGG | - | tig0025808:48512-48531 | None:intergenic | 35.0% | |
| TGAAATATGGAACCGTCATT+CGG | + | tig0025808:48512-48531 | Msa1424980:CDS | 35.0% | |
| AGATGAGGATCATTATCCAA+AGG | - | tig0025808:48588-48607 | None:intergenic | 35.0% | |
| TGGATAATGATCCTCATCTT+TGG | + | tig0025808:48589-48608 | Msa1424980:CDS | 35.0% | |
| GGATAATGATCCTCATCTTT+GGG | + | tig0025808:48590-48609 | Msa1424980:CDS | 35.0% | |
| GATAATGATCCTCATCTTTG+GGG | + | tig0025808:48591-48610 | Msa1424980:CDS | 35.0% | |
| GCGGTTACATTAAAAAAGTG+TGG | - | tig0025808:48636-48655 | None:intergenic | 35.0% | |
| TAATGTAACCGCGTTAACTT+TGG | + | tig0025808:48644-48663 | Msa1424980:CDS | 35.0% | |
| TTTGTGAGCATGATCCAATT+AGG | + | tig0025808:48943-48962 | Msa1424980:CDS | 35.0% | |
| AATTTCTGTTTACAACCACC+AGG | + | tig0025808:48990-49009 | Msa1424980:CDS | 35.0% | |
| ATTTCTGTTTACAACCACCA+GGG | + | tig0025808:48991-49010 | Msa1424980:CDS | 35.0% | |
| ! | TTGTATACCTGTGTTTTTCG+AGG | + | tig0025808:49058-49077 | Msa1424980:CDS | 35.0% |
| GATAAATCCTCGAAAAACAC+AGG | - | tig0025808:49068-49087 | None:intergenic | 35.0% | |
| TTCTGTTACTATACCTAAGG+AGG | + | tig0025808:49139-49158 | Msa1424980:CDS | 35.0% | |
| TTGAAAACAACATCCTCCTT+AGG | - | tig0025808:49155-49174 | None:intergenic | 35.0% | |
| !!! | TAAGGAGGATGTTGTTTTCA+AGG | + | tig0025808:49154-49173 | Msa1424980:CDS | 35.0% |
| !!! | AAGGAGGATGTTGTTTTCAA+GGG | + | tig0025808:49155-49174 | Msa1424980:CDS | 35.0% |
| !!! | AAAGTTTTGGAGTTGATTCC+TGG | + | tig0025808:49239-49258 | Msa1424980:CDS | 35.0% |
| TGATTCCTGGAGTTGTTTAT+AGG | + | tig0025808:49252-49271 | Msa1424980:CDS | 35.0% | |
| ! | TCCTGGTTTGAGAAATAAGA+AGG | + | tig0025808:49289-49308 | Msa1424980:CDS | 35.0% |
| ! | TCCTTCTTATTTCTCAAACC+AGG | - | tig0025808:49293-49312 | None:intergenic | 35.0% |
| TTTAACAATCGACGGTACTT+TGG | + | tig0025808:49322-49341 | Msa1424980:CDS | 35.0% | |
| CTTTGGATAAGATTCGATCT+AGG | + | tig0025808:49339-49358 | Msa1424980:CDS | 35.0% | |
| TAGGCTTCAAGAACTTGATT+TGG | + | tig0025808:49358-49377 | Msa1424980:CDS | 35.0% | |
| !!! | ATGTAGATGTGTGGTTTTGA+TGG | - | tig0025808:48033-48052 | None:intergenic | 35.0% |
| !! | TCATTTTCTTCGGATTTGGT+TGG | - | tig0025808:48093-48112 | None:intergenic | 35.0% |
| !! | TTGGTGGTAGTTTTCTTATG+TGG | - | tig0025808:48164-48183 | None:intergenic | 35.0% |
| !! | AGATCTAGGTTGAATTTTGG+TGG | - | tig0025808:48180-48199 | None:intergenic | 35.0% |
| AGTAAGGACATAAATCGTCT+AGG | - | tig0025808:48230-48249 | None:intergenic | 35.0% | |
| AAATGAGTTCAAGCATGGAT+GGG | - | tig0025808:48314-48333 | None:intergenic | 35.0% | |
| AAAATGAGTTCAAGCATGGA+TGG | - | tig0025808:48315-48334 | None:intergenic | 35.0% | |
| ATGGAAAATGAGTTCAAGCA+TGG | - | tig0025808:48319-48338 | None:intergenic | 35.0% | |
| !! | AAGATAACGGAGAGAATCAA+AGG | - | tig0025808:48418-48437 | None:intergenic | 35.0% |
| GATTCTCTCCGTTATCTTTA+CGG | + | tig0025808:48420-48439 | Msa1424980:CDS | 35.0% | |
| ATTCAGGACCGTAAAGATAA+CGG | - | tig0025808:48431-48450 | None:intergenic | 35.0% | |
| TGTTCACTGGAGTTATATTC+AGG | - | tig0025808:48447-48466 | None:intergenic | 35.0% | |
| TATAACTCCAGTGAACAACA+CGG | + | tig0025808:48450-48469 | Msa1424980:CDS | 35.0% | |
| AATGACGGTTCCATATTTCA+GGG | - | tig0025808:48512-48531 | None:intergenic | 35.0% | |
| TGAAATATGGAACCGTCATT+CGG | + | tig0025808:48512-48531 | Msa1424980:CDS | 35.0% | |
| AGATGAGGATCATTATCCAA+AGG | - | tig0025808:48588-48607 | None:intergenic | 35.0% | |
| TGGATAATGATCCTCATCTT+TGG | + | tig0025808:48589-48608 | Msa1424980:CDS | 35.0% | |
| GGATAATGATCCTCATCTTT+GGG | + | tig0025808:48590-48609 | Msa1424980:CDS | 35.0% | |
| GATAATGATCCTCATCTTTG+GGG | + | tig0025808:48591-48610 | Msa1424980:CDS | 35.0% | |
| GCGGTTACATTAAAAAAGTG+TGG | - | tig0025808:48636-48655 | None:intergenic | 35.0% | |
| TAATGTAACCGCGTTAACTT+TGG | + | tig0025808:48644-48663 | Msa1424980:CDS | 35.0% | |
| TTTGTGAGCATGATCCAATT+AGG | + | tig0025808:48943-48962 | Msa1424980:CDS | 35.0% | |
| AATTTCTGTTTACAACCACC+AGG | + | tig0025808:48990-49009 | Msa1424980:CDS | 35.0% | |
| ATTTCTGTTTACAACCACCA+GGG | + | tig0025808:48991-49010 | Msa1424980:CDS | 35.0% | |
| ! | TTGTATACCTGTGTTTTTCG+AGG | + | tig0025808:49058-49077 | Msa1424980:CDS | 35.0% |
| GATAAATCCTCGAAAAACAC+AGG | - | tig0025808:49068-49087 | None:intergenic | 35.0% | |
| TTCTGTTACTATACCTAAGG+AGG | + | tig0025808:49139-49158 | Msa1424980:CDS | 35.0% | |
| TTGAAAACAACATCCTCCTT+AGG | - | tig0025808:49155-49174 | None:intergenic | 35.0% | |
| !!! | TAAGGAGGATGTTGTTTTCA+AGG | + | tig0025808:49154-49173 | Msa1424980:CDS | 35.0% |
| !!! | AAGGAGGATGTTGTTTTCAA+GGG | + | tig0025808:49155-49174 | Msa1424980:CDS | 35.0% |
| !!! | AAAGTTTTGGAGTTGATTCC+TGG | + | tig0025808:49239-49258 | Msa1424980:CDS | 35.0% |
| TGATTCCTGGAGTTGTTTAT+AGG | + | tig0025808:49252-49271 | Msa1424980:CDS | 35.0% | |
| ! | TCCTGGTTTGAGAAATAAGA+AGG | + | tig0025808:49289-49308 | Msa1424980:CDS | 35.0% |
| ! | TCCTTCTTATTTCTCAAACC+AGG | - | tig0025808:49293-49312 | None:intergenic | 35.0% |
| TTTAACAATCGACGGTACTT+TGG | + | tig0025808:49322-49341 | Msa1424980:CDS | 35.0% | |
| CTTTGGATAAGATTCGATCT+AGG | + | tig0025808:49339-49358 | Msa1424980:CDS | 35.0% | |
| TAGGCTTCAAGAACTTGATT+TGG | + | tig0025808:49358-49377 | Msa1424980:CDS | 35.0% | |
| !! | GAAGATAGTGATGATGGAGA+TGG | - | tig0025808:48058-48077 | None:intergenic | 40.0% |
| ATTTGGTTGGATTCAAGAGG+AGG | - | tig0025808:48080-48099 | None:intergenic | 40.0% | |
| AAAATGAGTGCGAACAACGT+TGG | + | tig0025808:48136-48155 | Msa1424980:CDS | 40.0% | |
| TGTCCTTACTTAGCAAACCA+CGG | + | tig0025808:48240-48259 | Msa1424980:CDS | 40.0% | |
| !! | AAACCGTGGTTTGCTAAGTA+AGG | - | tig0025808:48246-48265 | None:intergenic | 40.0% |
| TTACTTAGCAAACCACGGTT+TGG | + | tig0025808:48245-48264 | Msa1424980:CDS | 40.0% | |
| TACTTAGCAAACCACGGTTT+GGG | + | tig0025808:48246-48265 | Msa1424980:CDS | 40.0% | |
| GATATTCTAACATACGGCGA+TGG | - | tig0025808:48338-48357 | None:intergenic | 40.0% | |
| TTAGGATCTTCCGTTAAGCA+TGG | - | tig0025808:48360-48379 | None:intergenic | 40.0% | |
| ! | TAAACTGCGTTAGCGGTTTT+AGG | - | tig0025808:48378-48397 | None:intergenic | 40.0% |
| AGGAAGATAAACTGCGTTAG+CGG | - | tig0025808:48385-48404 | None:intergenic | 40.0% | |
| GAATGACGGTTCCATATTTC+AGG | - | tig0025808:48513-48532 | None:intergenic | 40.0% | |
| GAAATATGGAACCGTCATTC+GGG | + | tig0025808:48513-48532 | Msa1424980:CDS | 40.0% | |
| AATGATCATGACCCGAATGA+CGG | - | tig0025808:48527-48546 | None:intergenic | 40.0% | |
| ACGAGATTCCAAAGTTAACG+CGG | - | tig0025808:48655-48674 | None:intergenic | 40.0% | |
| !! | TAACTTTGGAATCTCGTGCT+TGG | + | tig0025808:48658-48677 | Msa1424980:CDS | 40.0% |
| GAATCCAACAACGCTAGATT+CGG | - | tig0025808:48729-48748 | None:intergenic | 40.0% | |
| AAGAGCAAGAGAAGATCTCT+TGG | - | tig0025808:48775-48794 | None:intergenic | 40.0% | |
| ! | TCTTCTCTTGCTCTTTTTGC+AGG | + | tig0025808:48780-48799 | Msa1424980:CDS | 40.0% |
| TTTCTGCTACGCCAAATATC+CGG | + | tig0025808:48814-48833 | Msa1424980:CDS | 40.0% | |
| ATTCCATTCTTATACTCCGC+CGG | - | tig0025808:48836-48855 | None:intergenic | 40.0% | |
| CAGAAATTTGCACCCAACAT+TGG | - | tig0025808:48978-48997 | None:intergenic | 40.0% | |
| TTTCTGTTTACAACCACCAG+GGG | + | tig0025808:48992-49011 | Msa1424980:CDS | 40.0% | |
| ! | TCAAAAGTGGATTTACGCGT+AGG | - | tig0025808:49023-49042 | None:intergenic | 40.0% |
| ! | GAGAATGAGGGAGAAAGTTT+TGG | + | tig0025808:49226-49245 | Msa1424980:CDS | 40.0% |
| TGCTTCCTATAAACAACTCC+AGG | - | tig0025808:49260-49279 | None:intergenic | 40.0% | |
| ! | AGGAAGCATAATAGTTCTCC+TGG | + | tig0025808:49272-49291 | Msa1424980:CDS | 40.0% |
| !! | GAAGATAGTGATGATGGAGA+TGG | - | tig0025808:48058-48077 | None:intergenic | 40.0% |
| ATTTGGTTGGATTCAAGAGG+AGG | - | tig0025808:48080-48099 | None:intergenic | 40.0% | |
| AAAATGAGTGCGAACAACGT+TGG | + | tig0025808:48136-48155 | Msa1424980:CDS | 40.0% | |
| TGTCCTTACTTAGCAAACCA+CGG | + | tig0025808:48240-48259 | Msa1424980:CDS | 40.0% | |
| !! | AAACCGTGGTTTGCTAAGTA+AGG | - | tig0025808:48246-48265 | None:intergenic | 40.0% |
| TTACTTAGCAAACCACGGTT+TGG | + | tig0025808:48245-48264 | Msa1424980:CDS | 40.0% | |
| TACTTAGCAAACCACGGTTT+GGG | + | tig0025808:48246-48265 | Msa1424980:CDS | 40.0% | |
| GATATTCTAACATACGGCGA+TGG | - | tig0025808:48338-48357 | None:intergenic | 40.0% | |
| TTAGGATCTTCCGTTAAGCA+TGG | - | tig0025808:48360-48379 | None:intergenic | 40.0% | |
| ! | TAAACTGCGTTAGCGGTTTT+AGG | - | tig0025808:48378-48397 | None:intergenic | 40.0% |
| AGGAAGATAAACTGCGTTAG+CGG | - | tig0025808:48385-48404 | None:intergenic | 40.0% | |
| GAATGACGGTTCCATATTTC+AGG | - | tig0025808:48513-48532 | None:intergenic | 40.0% | |
| GAAATATGGAACCGTCATTC+GGG | + | tig0025808:48513-48532 | Msa1424980:CDS | 40.0% | |
| AATGATCATGACCCGAATGA+CGG | - | tig0025808:48527-48546 | None:intergenic | 40.0% | |
| ACGAGATTCCAAAGTTAACG+CGG | - | tig0025808:48655-48674 | None:intergenic | 40.0% | |
| !! | TAACTTTGGAATCTCGTGCT+TGG | + | tig0025808:48658-48677 | Msa1424980:CDS | 40.0% |
| GAATCCAACAACGCTAGATT+CGG | - | tig0025808:48729-48748 | None:intergenic | 40.0% | |
| AAGAGCAAGAGAAGATCTCT+TGG | - | tig0025808:48775-48794 | None:intergenic | 40.0% | |
| ! | TCTTCTCTTGCTCTTTTTGC+AGG | + | tig0025808:48780-48799 | Msa1424980:CDS | 40.0% |
| TTTCTGCTACGCCAAATATC+CGG | + | tig0025808:48814-48833 | Msa1424980:CDS | 40.0% | |
| ATTCCATTCTTATACTCCGC+CGG | - | tig0025808:48836-48855 | None:intergenic | 40.0% | |
| CAGAAATTTGCACCCAACAT+TGG | - | tig0025808:48978-48997 | None:intergenic | 40.0% | |
| TTTCTGTTTACAACCACCAG+GGG | + | tig0025808:48992-49011 | Msa1424980:CDS | 40.0% | |
| ! | TCAAAAGTGGATTTACGCGT+AGG | - | tig0025808:49023-49042 | None:intergenic | 40.0% |
| ! | GAGAATGAGGGAGAAAGTTT+TGG | + | tig0025808:49226-49245 | Msa1424980:CDS | 40.0% |
| TGCTTCCTATAAACAACTCC+AGG | - | tig0025808:49260-49279 | None:intergenic | 40.0% | |
| ! | AGGAAGCATAATAGTTCTCC+TGG | + | tig0025808:49272-49291 | Msa1424980:CDS | 40.0% |
| GAGATGGAGATGTAGATGTG+TGG | - | tig0025808:48042-48061 | None:intergenic | 45.0% | |
| GAGGAGGAAGATAGTGATGA+TGG | - | tig0025808:48064-48083 | None:intergenic | 45.0% | |
| ! | CGGATTTGGTTGGATTCAAG+AGG | - | tig0025808:48083-48102 | None:intergenic | 45.0% |
| CCAACTATGGGAACGGTTAT+GGG | - | tig0025808:48280-48299 | None:intergenic | 45.0% | |
| ACCAACTATGGGAACGGTTA+TGG | - | tig0025808:48281-48300 | None:intergenic | 45.0% | |
| TTCGGTACCAACTATGGGAA+CGG | - | tig0025808:48287-48306 | None:intergenic | 45.0% | |
| GAATCAAAGGCAGCGTAGTA+AGG | - | tig0025808:48405-48424 | None:intergenic | 45.0% | |
| ! | ATGAACACCGTGTTGTTCAC+TGG | - | tig0025808:48460-48479 | None:intergenic | 45.0% |
| TTGGGATTTCTCTCAGCCTT+TGG | + | tig0025808:48569-48588 | Msa1424980:CDS | 45.0% | |
| AACGAAGTTCCCCAAAGATG+AGG | - | tig0025808:48603-48622 | None:intergenic | 45.0% | |
| GGATGAAACGACGTTGGATA+AGG | - | tig0025808:48705-48724 | None:intergenic | 45.0% | |
| ATCTAGCGTTGTTGGATTCG+TGG | + | tig0025808:48730-48749 | Msa1424980:CDS | 45.0% | |
| ! | TCTCTTGCTCTTTTTGCAGG+TGG | + | tig0025808:48783-48802 | Msa1424980:CDS | 45.0% |
| CTTATACTCCGCCGGATATT+TGG | - | tig0025808:48828-48847 | None:intergenic | 45.0% | |
| TATCCGGCGGAGTATAAGAA+TGG | + | tig0025808:48830-48849 | Msa1424980:CDS | 45.0% | |
| TGCAAGAATCGCGTCAAAAG+TGG | - | tig0025808:49036-49055 | None:intergenic | 45.0% | |
| ! | ACTTTTGACGCGATTCTTGC+AGG | + | tig0025808:49035-49054 | Msa1424980:CDS | 45.0% |
| CTGCTAAATCGCAGTATTCG+TGG | + | tig0025808:49087-49106 | Msa1424980:CDS | 45.0% | |
| GCAGTATTCGTGGCATTTAC+CGG | + | tig0025808:49097-49116 | Msa1424980:CDS | 45.0% | |
| TGCAGAGAATACCTAGAGCT+AGG | + | tig0025808:49198-49217 | Msa1424980:CDS | 45.0% | |
| GCAGAGAATACCTAGAGCTA+GGG | + | tig0025808:49199-49218 | Msa1424980:CDS | 45.0% | |
| GAATACCTAGAGCTAGGGTT+AGG | + | tig0025808:49204-49223 | Msa1424980:CDS | 45.0% | |
| ! | ATTCTCCTAACCCTAGCTCT+AGG | - | tig0025808:49212-49231 | None:intergenic | 45.0% |
| AGCTAGGGTTAGGAGAATGA+GGG | + | tig0025808:49214-49233 | Msa1424980:CDS | 45.0% | |
| GAGATGGAGATGTAGATGTG+TGG | - | tig0025808:48042-48061 | None:intergenic | 45.0% | |
| GAGGAGGAAGATAGTGATGA+TGG | - | tig0025808:48064-48083 | None:intergenic | 45.0% | |
| ! | CGGATTTGGTTGGATTCAAG+AGG | - | tig0025808:48083-48102 | None:intergenic | 45.0% |
| CCAACTATGGGAACGGTTAT+GGG | - | tig0025808:48280-48299 | None:intergenic | 45.0% | |
| ACCAACTATGGGAACGGTTA+TGG | - | tig0025808:48281-48300 | None:intergenic | 45.0% | |
| TTCGGTACCAACTATGGGAA+CGG | - | tig0025808:48287-48306 | None:intergenic | 45.0% | |
| GAATCAAAGGCAGCGTAGTA+AGG | - | tig0025808:48405-48424 | None:intergenic | 45.0% | |
| ! | ATGAACACCGTGTTGTTCAC+TGG | - | tig0025808:48460-48479 | None:intergenic | 45.0% |
| TTGGGATTTCTCTCAGCCTT+TGG | + | tig0025808:48569-48588 | Msa1424980:CDS | 45.0% | |
| AACGAAGTTCCCCAAAGATG+AGG | - | tig0025808:48603-48622 | None:intergenic | 45.0% | |
| GGATGAAACGACGTTGGATA+AGG | - | tig0025808:48705-48724 | None:intergenic | 45.0% | |
| ATCTAGCGTTGTTGGATTCG+TGG | + | tig0025808:48730-48749 | Msa1424980:CDS | 45.0% | |
| ! | TCTCTTGCTCTTTTTGCAGG+TGG | + | tig0025808:48783-48802 | Msa1424980:CDS | 45.0% |
| CTTATACTCCGCCGGATATT+TGG | - | tig0025808:48828-48847 | None:intergenic | 45.0% | |
| TATCCGGCGGAGTATAAGAA+TGG | + | tig0025808:48830-48849 | Msa1424980:CDS | 45.0% | |
| TGCAAGAATCGCGTCAAAAG+TGG | - | tig0025808:49036-49055 | None:intergenic | 45.0% | |
| ! | ACTTTTGACGCGATTCTTGC+AGG | + | tig0025808:49035-49054 | Msa1424980:CDS | 45.0% |
| CTGCTAAATCGCAGTATTCG+TGG | + | tig0025808:49087-49106 | Msa1424980:CDS | 45.0% | |
| GCAGTATTCGTGGCATTTAC+CGG | + | tig0025808:49097-49116 | Msa1424980:CDS | 45.0% | |
| TGCAGAGAATACCTAGAGCT+AGG | + | tig0025808:49198-49217 | Msa1424980:CDS | 45.0% | |
| GCAGAGAATACCTAGAGCTA+GGG | + | tig0025808:49199-49218 | Msa1424980:CDS | 45.0% | |
| GAATACCTAGAGCTAGGGTT+AGG | + | tig0025808:49204-49223 | Msa1424980:CDS | 45.0% | |
| ! | ATTCTCCTAACCCTAGCTCT+AGG | - | tig0025808:49212-49231 | None:intergenic | 45.0% |
| AGCTAGGGTTAGGAGAATGA+GGG | + | tig0025808:49214-49233 | Msa1424980:CDS | 45.0% | |
| !!! | GGGTTTTTTGACCCAAACCG+TGG | - | tig0025808:48260-48279 | None:intergenic | 50.0% |
| CCCATAACCGTTCCCATAGT+TGG | + | tig0025808:48277-48296 | Msa1424980:CDS | 50.0% | |
| !! | GTCGGTTCGGTACCAACTAT+GGG | - | tig0025808:48292-48311 | None:intergenic | 50.0% |
| GAGTTCAAGCATGGATGGGT+CGG | - | tig0025808:48310-48329 | None:intergenic | 50.0% | |
| AGGCTGAGAGAAATCCCAAG+CGG | - | tig0025808:48568-48587 | None:intergenic | 50.0% | |
| GGAACAGCATGTTCTTGCCA+CGG | - | tig0025808:48684-48703 | None:intergenic | 50.0% | |
| TTCGGTGGATGAAACGACGT+TGG | - | tig0025808:48711-48730 | None:intergenic | 50.0% | |
| TCCACCGAATCTAGCGTTGT+TGG | + | tig0025808:48722-48741 | Msa1424980:CDS | 50.0% | |
| TCCAACAACGCTAGATTCGG+TGG | - | tig0025808:48726-48745 | None:intergenic | 50.0% | |
| ! | CTTGCTCTTTTTGCAGGTGG+TGG | + | tig0025808:48786-48805 | Msa1424980:CDS | 50.0% |
| GAGCTAGGGTTAGGAGAATG+AGG | + | tig0025808:49213-49232 | Msa1424980:CDS | 50.0% | |
| !!! | GGGTTTTTTGACCCAAACCG+TGG | - | tig0025808:48260-48279 | None:intergenic | 50.0% |
| CCCATAACCGTTCCCATAGT+TGG | + | tig0025808:48277-48296 | Msa1424980:CDS | 50.0% | |
| !! | GTCGGTTCGGTACCAACTAT+GGG | - | tig0025808:48292-48311 | None:intergenic | 50.0% |
| GAGTTCAAGCATGGATGGGT+CGG | - | tig0025808:48310-48329 | None:intergenic | 50.0% | |
| AGGCTGAGAGAAATCCCAAG+CGG | - | tig0025808:48568-48587 | None:intergenic | 50.0% | |
| GGAACAGCATGTTCTTGCCA+CGG | - | tig0025808:48684-48703 | None:intergenic | 50.0% | |
| TTCGGTGGATGAAACGACGT+TGG | - | tig0025808:48711-48730 | None:intergenic | 50.0% | |
| TCCACCGAATCTAGCGTTGT+TGG | + | tig0025808:48722-48741 | Msa1424980:CDS | 50.0% | |
| TCCAACAACGCTAGATTCGG+TGG | - | tig0025808:48726-48745 | None:intergenic | 50.0% | |
| ! | CTTGCTCTTTTTGCAGGTGG+TGG | + | tig0025808:48786-48805 | Msa1424980:CDS | 50.0% |
| GAGCTAGGGTTAGGAGAATG+AGG | + | tig0025808:49213-49232 | Msa1424980:CDS | 50.0% | |
| !! | GGTCGGTTCGGTACCAACTA+TGG | - | tig0025808:48293-48312 | None:intergenic | 55.0% |
| CAAGCATGGATGGGTCGGTT+CGG | - | tig0025808:48305-48324 | None:intergenic | 55.0% | |
| AGAGAAATCCCAAGCGGGTC+GGG | - | tig0025808:48562-48581 | None:intergenic | 55.0% | |
| GAGAGAAATCCCAAGCGGGT+CGG | - | tig0025808:48563-48582 | None:intergenic | 55.0% | |
| GGCTGAGAGAAATCCCAAGC+GGG | - | tig0025808:48567-48586 | None:intergenic | 55.0% | |
| !! | GCTCTTTTTGCAGGTGGTGG+TGG | + | tig0025808:48789-48808 | Msa1424980:CDS | 55.0% |
| CTGCTACGCCAAATATCCGG+CGG | + | tig0025808:48817-48836 | Msa1424980:CDS | 55.0% | |
| !! | TTACGCGTAGGAGTATCCCC+TGG | - | tig0025808:49011-49030 | None:intergenic | 55.0% |
| !! | GGTCGGTTCGGTACCAACTA+TGG | - | tig0025808:48293-48312 | None:intergenic | 55.0% |
| CAAGCATGGATGGGTCGGTT+CGG | - | tig0025808:48305-48324 | None:intergenic | 55.0% | |
| AGAGAAATCCCAAGCGGGTC+GGG | - | tig0025808:48562-48581 | None:intergenic | 55.0% | |
| GAGAGAAATCCCAAGCGGGT+CGG | - | tig0025808:48563-48582 | None:intergenic | 55.0% | |
| GGCTGAGAGAAATCCCAAGC+GGG | - | tig0025808:48567-48586 | None:intergenic | 55.0% | |
| !! | GCTCTTTTTGCAGGTGGTGG+TGG | + | tig0025808:48789-48808 | Msa1424980:CDS | 55.0% |
| CTGCTACGCCAAATATCCGG+CGG | + | tig0025808:48817-48836 | Msa1424980:CDS | 55.0% | |
| !! | TTACGCGTAGGAGTATCCCC+TGG | - | tig0025808:49011-49030 | None:intergenic | 55.0% |
| TTGTTATGGCCCGACCCGCT+TGG | + | tig0025808:48550-48569 | Msa1424980:CDS | 60.0% | |
| TGTTATGGCCCGACCCGCTT+GGG | + | tig0025808:48551-48570 | Msa1424980:CDS | 60.0% | |
| TGGAATCTCGTGCTTGGCCG+TGG | + | tig0025808:48664-48683 | Msa1424980:CDS | 60.0% | |
| TTGTTATGGCCCGACCCGCT+TGG | + | tig0025808:48550-48569 | Msa1424980:CDS | 60.0% | |
| TGTTATGGCCCGACCCGCTT+GGG | + | tig0025808:48551-48570 | Msa1424980:CDS | 60.0% | |
| TGGAATCTCGTGCTTGGCCG+TGG | + | tig0025808:48664-48683 | Msa1424980:CDS | 60.0% | |
| !! | CGCGTAGGAGTATCCCCTGG+TGG | - | tig0025808:49008-49027 | None:intergenic | 65.0% |
| !! | CGCGTAGGAGTATCCCCTGG+TGG | - | tig0025808:49008-49027 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025808 | gene | 48024 | 49388 | 48024 | ID=Msa1424980;Name=Msa1424980 |
| tig0025808 | mRNA | 48024 | 49388 | 48024 | ID=Msa1424980-mRNA-1;Parent=Msa1424980;Name=Msa1424980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|454 |
| tig0025808 | exon | 48024 | 49388 | 48024 | ID=Msa1424980-mRNA-1:exon:4058;Parent=Msa1424980-mRNA-1 |
| tig0025808 | CDS | 48024 | 49388 | 48024 | ID=Msa1424980-mRNA-1:cds;Parent=Msa1424980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
