Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534400 | XP_003604818.1 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534400 | sp|P29501|TBB2_PEA | 97.982 | 446 | 9 | 0 | 3 | 448 | 1 | 446 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534400 | G7JRA2 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0534400 | 0.814792 | 1.286277e-51 | -8.615850e-47 |
| Msa0001960 | Msa0534400 | 0.821635 | 3.635804e-53 | -8.615850e-47 |
| Msa0002680 | Msa0534400 | 0.842885 | 1.967033e-58 | -8.615850e-47 |
| Msa0002710 | Msa0534400 | 0.829000 | 6.575401e-55 | -8.615850e-47 |
| Msa0006850 | Msa0534400 | -0.801734 | 7.830435e-49 | -8.615850e-47 |
| Msa0012940 | Msa0534400 | 0.810685 | 1.019507e-50 | -8.615850e-47 |
| Msa0014570 | Msa0534400 | 0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0015670 | Msa0534400 | 0.830592 | 2.693125e-55 | -8.615850e-47 |
| Msa0017950 | Msa0534400 | 0.804261 | 2.352045e-49 | -8.615850e-47 |
| Msa0022750 | Msa0534400 | -0.825097 | 5.644977e-54 | -8.615850e-47 |
| Msa0035120 | Msa0534400 | 0.842212 | 2.968631e-58 | -8.615850e-47 |
| Msa0035130 | Msa0534400 | 0.818906 | 1.534535e-52 | -8.615850e-47 |
| Msa0036130 | Msa0534400 | 0.801984 | 6.957741e-49 | -8.615850e-47 |
| Msa0039250 | Msa0534400 | 0.818579 | 1.820932e-52 | -8.615850e-47 |
| Msa0039570 | Msa0534400 | 0.804528 | 2.068690e-49 | -8.615850e-47 |
| Msa0044090 | Msa0534400 | 0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0045340 | Msa0534400 | 0.808553 | 2.927287e-50 | -8.615850e-47 |
| Msa0045550 | Msa0534400 | 0.821704 | 3.505270e-53 | -8.615850e-47 |
| Msa0046560 | Msa0534400 | 0.800148 | 1.650939e-48 | -8.615850e-47 |
| Msa0047640 | Msa0534400 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
| Msa0051020 | Msa0534400 | 0.814660 | 1.375669e-51 | -8.615850e-47 |
| Msa0061340 | Msa0534400 | 0.801957 | 7.047055e-49 | -8.615850e-47 |
| Msa0089980 | Msa0534400 | 0.829859 | 4.066814e-55 | -8.615850e-47 |
| Msa0090010 | Msa0534400 | 0.828963 | 6.710725e-55 | -8.615850e-47 |
| Msa0093850 | Msa0534400 | 0.818411 | 1.987429e-52 | -8.615850e-47 |
| Msa0097770 | Msa0534400 | 0.833678 | 4.646129e-56 | -8.615850e-47 |
| Msa0101270 | Msa0534400 | 0.809742 | 1.627956e-50 | -8.615850e-47 |
| Msa0106620 | Msa0534400 | 0.859463 | 4.063763e-63 | -8.615850e-47 |
| Msa0106710 | Msa0534400 | 0.835341 | 1.775302e-56 | -8.615850e-47 |
| Msa0108410 | Msa0534400 | 0.807472 | 4.971705e-50 | -8.615850e-47 |
| Msa0112270 | Msa0534400 | 0.820144 | 8.009183e-53 | -8.615850e-47 |
| Msa0116790 | Msa0534400 | 0.822570 | 2.206978e-53 | -8.615850e-47 |
| Msa0130110 | Msa0534400 | 0.808877 | 2.495036e-50 | -8.615850e-47 |
| Msa0133720 | Msa0534400 | 0.819506 | 1.120605e-52 | -8.615850e-47 |
| Msa0133820 | Msa0534400 | 0.816267 | 6.039780e-52 | -8.615850e-47 |
| Msa0138360 | Msa0534400 | 0.838029 | 3.665662e-57 | -8.615850e-47 |
| Msa0139670 | Msa0534400 | 0.812963 | 3.253929e-51 | -8.615850e-47 |
| Msa0141400 | Msa0534400 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0142460 | Msa0534400 | 0.836841 | 7.388072e-57 | -8.615850e-47 |
| Msa0144360 | Msa0534400 | 0.826598 | 2.484710e-54 | -8.615850e-47 |
| Msa0147980 | Msa0534400 | 0.824171 | 9.326550e-54 | -8.615850e-47 |
| Msa0175930 | Msa0534400 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0181230 | Msa0534400 | 0.829571 | 4.777818e-55 | -8.615850e-47 |
| Msa0183760 | Msa0534400 | 0.830606 | 2.672177e-55 | -8.615850e-47 |
| Msa0187030 | Msa0534400 | 0.810816 | 9.551213e-51 | -8.615850e-47 |
| Msa0188150 | Msa0534400 | 0.807081 | 6.016095e-50 | -8.615850e-47 |
| Msa0191890 | Msa0534400 | 0.814676 | 1.364702e-51 | -8.615850e-47 |
| Msa0207350 | Msa0534400 | 0.804199 | 2.423098e-49 | -8.615850e-47 |
| Msa0220730 | Msa0534400 | 0.827825 | 1.263311e-54 | -8.615850e-47 |
| Msa0225480 | Msa0534400 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0229920 | Msa0534400 | 0.804835 | 1.785396e-49 | -8.615850e-47 |
| Msa0230370 | Msa0534400 | 0.833936 | 4.004949e-56 | -8.615850e-47 |
| Msa0231190 | Msa0534400 | 0.822592 | 2.181823e-53 | -8.615850e-47 |
| Msa0237210 | Msa0534400 | 0.802746 | 4.845883e-49 | -8.615850e-47 |
| Msa0372810 | Msa0534400 | 0.823885 | 1.088395e-53 | -8.615850e-47 |
| Msa0378970 | Msa0534400 | 0.812547 | 4.012275e-51 | -8.615850e-47 |
| Msa0382370 | Msa0534400 | 0.817233 | 3.667888e-52 | -8.615850e-47 |
| Msa0388990 | Msa0534400 | 0.838350 | 3.030130e-57 | -8.615850e-47 |
| Msa0394140 | Msa0534400 | 0.802707 | 4.937522e-49 | -8.615850e-47 |
| Msa0430750 | Msa0534400 | 0.832711 | 8.086670e-56 | -8.615850e-47 |
| Msa0432160 | Msa0534400 | 0.810707 | 1.008065e-50 | -8.615850e-47 |
| Msa0432170 | Msa0534400 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa0435370 | Msa0534400 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
| Msa0435420 | Msa0534400 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0435570 | Msa0534400 | 0.812763 | 3.599759e-51 | -8.615850e-47 |
| Msa0450400 | Msa0534400 | -0.815629 | 8.380834e-52 | -8.615850e-47 |
| Msa0456880 | Msa0534400 | 0.804748 | 1.861596e-49 | -8.615850e-47 |
| Msa0468250 | Msa0534400 | 0.804005 | 2.658994e-49 | -8.615850e-47 |
| Msa0474940 | Msa0534400 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0476680 | Msa0534400 | 0.815532 | 8.808095e-52 | -8.615850e-47 |
| Msa0481970 | Msa0534400 | 0.828449 | 8.936042e-55 | -8.615850e-47 |
| Msa0240900 | Msa0534400 | 0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0241830 | Msa0534400 | 0.818325 | 2.079581e-52 | -8.615850e-47 |
| Msa0245650 | Msa0534400 | 0.803663 | 3.130199e-49 | -8.615850e-47 |
| Msa0251400 | Msa0534400 | 0.844543 | 7.085196e-59 | -8.615850e-47 |
| Msa0261160 | Msa0534400 | 0.858241 | 9.430945e-63 | -8.615850e-47 |
| Msa0261170 | Msa0534400 | 0.830017 | 3.720273e-55 | -8.615850e-47 |
| Msa0264400 | Msa0534400 | 0.800142 | 1.655535e-48 | -8.615850e-47 |
| Msa0265850 | Msa0534400 | 0.812104 | 5.014056e-51 | -8.615850e-47 |
| Msa0277420 | Msa0534400 | 0.804294 | 2.314399e-49 | -8.615850e-47 |
| Msa0279850 | Msa0534400 | 0.833975 | 3.916436e-56 | -8.615850e-47 |
| Msa0298410 | Msa0534400 | 0.808185 | 3.507385e-50 | -8.615850e-47 |
| Msa0300320 | Msa0534400 | 0.824594 | 7.415820e-54 | -8.615850e-47 |
| Msa0312530 | Msa0534400 | 0.842661 | 2.255943e-58 | -8.615850e-47 |
| Msa0317970 | Msa0534400 | 0.825599 | 4.292879e-54 | -8.615850e-47 |
| Msa0320500 | Msa0534400 | 0.800765 | 1.236126e-48 | -8.615850e-47 |
| Msa0322900 | Msa0534400 | 0.852369 | 4.830109e-61 | -8.615850e-47 |
| Msa0323260 | Msa0534400 | 0.809177 | 2.152280e-50 | -8.615850e-47 |
| Msa0328080 | Msa0534400 | 0.816945 | 4.255496e-52 | -8.615850e-47 |
| Msa0328460 | Msa0534400 | 0.857597 | 1.464600e-62 | -8.615850e-47 |
| Msa0341690 | Msa0534400 | 0.825403 | 4.778444e-54 | -8.615850e-47 |
| Msa0347950 | Msa0534400 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
| Msa0347990 | Msa0534400 | 0.817830 | 2.690846e-52 | -8.615850e-47 |
| Msa0363400 | Msa0534400 | 0.807875 | 4.082258e-50 | -8.615850e-47 |
| Msa0485240 | Msa0534400 | 0.818934 | 1.512444e-52 | -8.615850e-47 |
| Msa0518030 | Msa0534400 | 0.858941 | 5.829764e-63 | -8.615850e-47 |
| Msa0521010 | Msa0534400 | 0.819128 | 1.366364e-52 | -8.615850e-47 |
| Msa0521020 | Msa0534400 | 0.825456 | 4.642616e-54 | -8.615850e-47 |
| Msa0521670 | Msa0534400 | 0.805109 | 1.564328e-49 | -8.615850e-47 |
| Msa0527190 | Msa0534400 | 0.841387 | 4.902411e-58 | -8.615850e-47 |
| Msa0527820 | Msa0534400 | 0.818999 | 1.462131e-52 | -8.615850e-47 |
| Msa0531250 | Msa0534400 | 0.809639 | 1.712823e-50 | -8.615850e-47 |
| Msa0534400 | Msa0534720 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
| Msa0534400 | Msa0542470 | 0.810449 | 1.146246e-50 | -8.615850e-47 |
| Msa0534400 | Msa0547990 | 0.820604 | 6.282162e-53 | -8.615850e-47 |
| Msa0534400 | Msa0556010 | 0.870838 | 1.078423e-66 | -8.615850e-47 |
| Msa0534400 | Msa0572750 | 0.836473 | 9.165672e-57 | -8.615850e-47 |
| Msa0534400 | Msa0573850 | 0.807539 | 4.811573e-50 | -8.615850e-47 |
| Msa0534400 | Msa0575660 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0534400 | Msa0579660 | 0.809546 | 1.793966e-50 | -8.615850e-47 |
| Msa0534400 | Msa0581470 | 0.819600 | 1.066720e-52 | -8.615850e-47 |
| Msa0534400 | Msa0581690 | 0.826059 | 3.339132e-54 | -8.615850e-47 |
| Msa0534400 | Msa0582480 | 0.838167 | 3.378358e-57 | -8.615850e-47 |
| Msa0534400 | Msa0586220 | 0.836203 | 1.073779e-56 | -8.615850e-47 |
| Msa0534400 | Msa0590640 | 0.906005 | 2.352574e-80 | -8.615850e-47 |
| Msa0534400 | Msa0597770 | 0.844826 | 5.945213e-59 | -8.615850e-47 |
| Msa0534400 | Msa0598520 | 0.811481 | 6.852966e-51 | -8.615850e-47 |
| Msa0534400 | Msa0601530 | 0.828456 | 8.900168e-55 | -8.615850e-47 |
| Msa0534400 | Msa0601950 | 0.822824 | 1.926413e-53 | -8.615850e-47 |
| Msa0534400 | Msa0615420 | 0.803894 | 2.803845e-49 | -8.615850e-47 |
| Msa0534400 | Msa0619420 | 0.808220 | 3.447399e-50 | -8.615850e-47 |
| Msa0534400 | Msa0624900 | 0.802069 | 6.681970e-49 | -8.615850e-47 |
| Msa0534400 | Msa0626270 | 0.830085 | 3.580846e-55 | -8.615850e-47 |
| Msa0534400 | Msa0626460 | 0.824595 | 7.411386e-54 | -8.615850e-47 |
| Msa0534400 | Msa0628420 | 0.802636 | 5.107911e-49 | -8.615850e-47 |
| Msa0534400 | Msa0630940 | 0.933093 | 3.172445e-95 | -8.615850e-47 |
| Msa0534400 | Msa0638360 | 0.821845 | 3.251527e-53 | -8.615850e-47 |
| Msa0534400 | Msa0638480 | 0.817057 | 4.016598e-52 | -8.615850e-47 |
| Msa0534400 | Msa0644030 | 0.819636 | 1.046834e-52 | -8.615850e-47 |
| Msa0534400 | Msa0644800 | 0.818533 | 1.865051e-52 | -8.615850e-47 |
| Msa0534400 | Msa0655920 | 0.805432 | 1.338482e-49 | -8.615850e-47 |
| Msa0534400 | Msa0657660 | 0.812608 | 3.891983e-51 | -8.615850e-47 |
| Msa0534400 | Msa0658590 | 0.804330 | 2.275308e-49 | -8.615850e-47 |
| Msa0534400 | Msa0659550 | 0.813092 | 3.049187e-51 | -8.615850e-47 |
| Msa0534400 | Msa0662940 | 0.809958 | 1.462776e-50 | -8.615850e-47 |
| Msa0534400 | Msa0663270 | 0.837279 | 5.708372e-57 | -8.615850e-47 |
| Msa0534400 | Msa0664090 | 0.817443 | 3.289864e-52 | -8.615850e-47 |
| Msa0534400 | Msa0664540 | 0.847247 | 1.305004e-59 | -8.615850e-47 |
| Msa0534400 | Msa0669180 | 0.905024 | 6.638128e-80 | -8.615850e-47 |
| Msa0534400 | Msa0689760 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0534400 | Msa0692880 | 0.878974 | 1.818734e-69 | -8.615850e-47 |
| Msa0534400 | Msa0695270 | 0.824073 | 9.835318e-54 | -8.615850e-47 |
| Msa0534400 | Msa0696850 | 0.814686 | 1.357708e-51 | -8.615850e-47 |
| Msa0534400 | Msa0696860 | 0.802180 | 6.341193e-49 | -8.615850e-47 |
| Msa0534400 | Msa0698100 | 0.814728 | 1.329231e-51 | -8.615850e-47 |
| Msa0534400 | Msa0698640 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0534400 | Msa0702720 | 0.817050 | 4.031537e-52 | -8.615850e-47 |
| Msa0534400 | Msa0709120 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
| Msa0534400 | Msa0713680 | 0.864005 | 1.659301e-64 | -8.615850e-47 |
| Msa0534400 | Msa0716860 | 0.815866 | 7.421792e-52 | -8.615850e-47 |
| Msa0534400 | Msa0738240 | 0.816994 | 4.150008e-52 | -8.615850e-47 |
| Msa0534400 | Msa0750000 | 0.850193 | 1.989648e-60 | -8.615850e-47 |
| Msa0534400 | Msa0750250 | 0.854216 | 1.426856e-61 | -8.615850e-47 |
| Msa0534400 | Msa0751260 | 0.804984 | 1.661452e-49 | -8.615850e-47 |
| Msa0534400 | Msa0757800 | 0.837077 | 6.431193e-57 | -8.615850e-47 |
| Msa0534400 | Msa0760560 | 0.816065 | 6.701497e-52 | -8.615850e-47 |
| Msa0534400 | Msa0789100 | 0.822120 | 2.807265e-53 | -8.615850e-47 |
| Msa0534400 | Msa0795070 | 0.804256 | 2.356712e-49 | -8.615850e-47 |
| Msa0534400 | Msa0797920 | 0.823462 | 1.367376e-53 | -8.615850e-47 |
| Msa0534400 | Msa0833650 | 0.801201 | 1.006762e-48 | -8.615850e-47 |
| Msa0534400 | Msa0835970 | 0.872131 | 4.024473e-67 | -8.615850e-47 |
| Msa0534400 | Msa0853760 | 0.809585 | 1.759614e-50 | -8.615850e-47 |
| Msa0534400 | Msa0861510 | 0.842330 | 2.762290e-58 | -8.615850e-47 |
| Msa0534400 | Msa0861530 | 0.837585 | 4.765581e-57 | -8.615850e-47 |
| Msa0534400 | Msa0861600 | 0.836745 | 7.813663e-57 | -8.615850e-47 |
| Msa0534400 | Msa0868440 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0534400 | Msa0871720 | 0.810248 | 1.266569e-50 | -8.615850e-47 |
| Msa0534400 | Msa0881350 | 0.801798 | 7.596290e-49 | -8.615850e-47 |
| Msa0534400 | Msa0903780 | 0.814492 | 1.498581e-51 | -8.615850e-47 |
| Msa0534400 | Msa0933760 | 0.820827 | 5.582142e-53 | -8.615850e-47 |
| Msa0534400 | Msa0934140 | 0.847910 | 8.574644e-60 | -8.615850e-47 |
| Msa0534400 | Msa0937020 | 0.807665 | 4.523710e-50 | -8.615850e-47 |
| Msa0534400 | Msa0944660 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
| Msa0534400 | Msa0967380 | 0.805727 | 1.160845e-49 | -8.615850e-47 |
| Msa0534400 | Msa0971650 | 0.830290 | 3.192250e-55 | -8.615850e-47 |
| Msa0534400 | Msa1010070 | 0.808401 | 3.153216e-50 | -8.615850e-47 |
| Msa0534400 | Msa1027990 | 0.804372 | 2.229317e-49 | -8.615850e-47 |
| Msa0534400 | Msa1034500 | 0.839831 | 1.252190e-57 | -8.615850e-47 |
| Msa0534400 | Msa1038080 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa0534400 | Msa1043330 | 0.821099 | 4.833440e-53 | -8.615850e-47 |
| Msa0534400 | Msa1079230 | 0.804672 | 1.930920e-49 | -8.615850e-47 |
| Msa0534400 | Msa1085330 | 0.844681 | 6.502831e-59 | -8.615850e-47 |
| Msa0534400 | Msa1088410 | 0.837469 | 5.102943e-57 | -8.615850e-47 |
| Msa0534400 | Msa1089450 | 0.819270 | 1.268132e-52 | -8.615850e-47 |
| Msa0534400 | Msa1116400 | 0.841312 | 5.128208e-58 | -8.615850e-47 |
| Msa0534400 | Msa1123350 | 0.827820 | 1.266839e-54 | -8.615850e-47 |
| Msa0534400 | Msa1127430 | 0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa0534400 | Msa1127590 | 0.833318 | 5.711914e-56 | -8.615850e-47 |
| Msa0534400 | Msa1129690 | 0.810936 | 8.994303e-51 | -8.615850e-47 |
| Msa0534400 | Msa1145580 | 0.805050 | 1.609148e-49 | -8.615850e-47 |
| Msa0534400 | Msa1145810 | 0.805065 | 1.597904e-49 | -8.615850e-47 |
| Msa0534400 | Msa1157870 | 0.800900 | 1.160235e-48 | -8.615850e-47 |
| Msa0534400 | Msa1162770 | 0.830322 | 3.134536e-55 | -8.615850e-47 |
| Msa0534400 | Msa1165490 | 0.801924 | 7.158356e-49 | -8.615850e-47 |
| Msa0534400 | Msa1169720 | 0.838657 | 2.524289e-57 | -8.615850e-47 |
| Msa0534400 | Msa1203710 | 0.813933 | 1.991723e-51 | -8.615850e-47 |
| Msa0534400 | Msa1204100 | -0.845219 | 4.654821e-59 | -8.615850e-47 |
| Msa0534400 | Msa1208430 | 0.813414 | 2.591026e-51 | -8.615850e-47 |
| Msa0534400 | Msa1213810 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0534400 | Msa1214320 | 0.818697 | 1.711825e-52 | -8.615850e-47 |
| Msa0534400 | Msa1219000 | 0.804894 | 1.734899e-49 | -8.615850e-47 |
| Msa0534400 | Msa1221060 | 0.800758 | 1.240372e-48 | -8.615850e-47 |
| Msa0534400 | Msa1225860 | -0.801110 | 1.050753e-48 | -8.615850e-47 |
| Msa0534400 | Msa1231820 | 0.801283 | 9.688059e-49 | -8.615850e-47 |
| Msa0534400 | Msa1234550 | 0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa0534400 | Msa1234620 | 0.803214 | 3.879656e-49 | -8.615850e-47 |
| Msa0534400 | Msa1251760 | 0.810119 | 1.350299e-50 | -8.615850e-47 |
| Msa0534400 | Msa1262010 | 0.800632 | 1.315548e-48 | -8.615850e-47 |
| Msa0534400 | Msa1265590 | 0.807066 | 6.059564e-50 | -8.615850e-47 |
| Msa0534400 | Msa1267770 | 0.817964 | 2.508723e-52 | -8.615850e-47 |
| Msa0534400 | Msa1277080 | 0.836710 | 7.977126e-57 | -8.615850e-47 |
| Msa0534400 | Msa1296460 | -0.837941 | 3.862107e-57 | -8.615850e-47 |
| Msa0534400 | Msa1298370 | 0.805802 | 1.119679e-49 | -8.615850e-47 |
| Msa0534400 | Msa1317950 | 0.828666 | 7.919353e-55 | -8.615850e-47 |
| Msa0534400 | Msa1317960 | 0.839215 | 1.810057e-57 | -8.615850e-47 |
| Msa0534400 | Msa1323690 | 0.807229 | 5.598067e-50 | -8.615850e-47 |
| Msa0534400 | Msa1328640 | 0.814598 | 1.420125e-51 | -8.615850e-47 |
| Msa0534400 | Msa1329050 | -0.844733 | 6.297046e-59 | -8.615850e-47 |
| Msa0534400 | Msa1335160 | 0.832719 | 8.051818e-56 | -8.615850e-47 |
| Msa0534400 | Msa1338830 | 0.808468 | 3.051628e-50 | -8.615850e-47 |
| Msa0534400 | Msa1341840 | 0.816330 | 5.847595e-52 | -8.615850e-47 |
| Msa0534400 | Msa1348090 | 0.854787 | 9.752520e-62 | -8.615850e-47 |
| Msa0534400 | Msa1353250 | 0.822092 | 2.850416e-53 | -8.615850e-47 |
| Msa0534400 | Msa1355450 | 0.814580 | 1.432901e-51 | -8.615850e-47 |
| Msa0534400 | Msa1360420 | 0.803466 | 3.440495e-49 | -8.615850e-47 |
| Msa0534400 | Msa1366550 | 0.818478 | 1.919397e-52 | -8.615850e-47 |
| Msa0534400 | Msa1369690 | 0.815427 | 9.298767e-52 | -8.615850e-47 |
| Msa0534400 | Msa1371520 | 0.830016 | 3.722905e-55 | -8.615850e-47 |
| Msa0534400 | Msa1373820 | 0.800954 | 1.130896e-48 | -8.615850e-47 |
| Msa0534400 | Msa1383530 | 0.822620 | 2.148442e-53 | -8.615850e-47 |
| Msa0534400 | Msa1393820 | 0.841451 | 4.715169e-58 | -8.615850e-47 |
| Msa0534400 | Msa1393840 | -0.800010 | 1.761554e-48 | -8.615850e-47 |
| Msa0534400 | Msa1401270 | 0.816715 | 4.793639e-52 | -8.615850e-47 |
| Msa0534400 | Msa1410420 | 0.825063 | 5.748193e-54 | -8.615850e-47 |
| Msa0534400 | Msa1413620 | 0.803424 | 3.509413e-49 | -8.615850e-47 |
| Msa0534400 | Msa1418240 | 0.830381 | 3.031839e-55 | -8.615850e-47 |
| Msa0534400 | Msa1420250 | 0.815551 | 8.723207e-52 | -8.615850e-47 |
| Msa0534400 | Msa1424980 | 0.826958 | 2.038244e-54 | -8.615850e-47 |
| Msa0534400 | Msa1427200 | 0.805501 | 1.294994e-49 | -8.615850e-47 |
| Msa0534400 | Msa1438520 | 0.808497 | 3.008496e-50 | -8.615850e-47 |
| Msa0534400 | Msa1443300 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0534400 | Msa1446780 | 0.819774 | 9.732784e-53 | -8.615850e-47 |
| Msa0534400 | Msa1447180 | 0.826045 | 3.364548e-54 | -8.615850e-47 |
| Msa0534400 | Msa1454530 | 0.830914 | 2.245761e-55 | -8.615850e-47 |
| Msa0534400 | Msa1458600 | 0.805078 | 1.588239e-49 | -8.615850e-47 |
| Msa0534400 | Msa1459460 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa0534400 | Msa1461540 | 0.845131 | 4.916584e-59 | -8.615850e-47 |
| Msa0534400 | Msa1463030 | 0.825618 | 4.248843e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534400 | MtrunA17_Chr4g0008401 | 99.777 | 449 | 1 | 0 | 1 | 449 | 1 | 449 | 0.0 | 943 |
| Msa0534400 | MtrunA17_Chr4g0008361 | 97.991 | 448 | 9 | 0 | 1 | 448 | 1 | 448 | 0.0 | 928 |
| Msa0534400 | MtrunA17_Chr1g0203181 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 856 |
| Msa0534400 | MtrunA17_Chr7g0255791 | 96.047 | 430 | 17 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| Msa0534400 | MtrunA17_Chr2g0292921 | 95.581 | 430 | 19 | 0 | 1 | 430 | 1 | 430 | 0.0 | 846 |
| Msa0534400 | MtrunA17_Chr4g0007371 | 95.602 | 432 | 17 | 1 | 1 | 430 | 1 | 432 | 0.0 | 846 |
| Msa0534400 | MtrunA17_Chr4g0051631 | 94.884 | 430 | 22 | 0 | 1 | 430 | 1 | 430 | 0.0 | 841 |
| Msa0534400 | MtrunA17_Chr3g0142731 | 92.593 | 432 | 30 | 1 | 1 | 430 | 1 | 432 | 0.0 | 827 |
| Msa0534400 | MtrunA17_Chr8g0393021 | 90.068 | 443 | 41 | 2 | 1 | 440 | 1 | 443 | 0.0 | 820 |
| Msa0534400 | MtrunA17_Chr8g0386781 | 90.930 | 430 | 39 | 0 | 1 | 430 | 1 | 430 | 0.0 | 818 |
| Msa0534400 | MtrunA17_Chr8g0378821 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 2.62e-125 | 371 |
| Msa0534400 | MtrunA17_Chr3g0140821 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 3.46e-124 | 368 |
| Msa0534400 | MtrunA17_Chr1g0206881 | 41.907 | 451 | 249 | 3 | 1 | 441 | 1 | 448 | 6.36e-124 | 367 |
| Msa0534400 | MtrunA17_Chr4g0054511 | 42.105 | 437 | 237 | 3 | 1 | 424 | 1 | 434 | 9.16e-123 | 365 |
| Msa0534400 | MtrunA17_Chr7g0253411 | 41.244 | 434 | 245 | 2 | 1 | 424 | 1 | 434 | 1.35e-122 | 364 |
| Msa0534400 | MtrunA17_Chr6g0461281 | 40.618 | 453 | 253 | 3 | 1 | 442 | 1 | 448 | 5.85e-121 | 360 |
| Msa0534400 | MtrunA17_Chr2g0300671 | 38.018 | 434 | 256 | 4 | 1 | 425 | 1 | 430 | 1.84e-99 | 305 |
| Msa0534400 | MtrunA17_Chr2g0300491 | 37.416 | 449 | 268 | 4 | 1 | 441 | 1 | 444 | 4.44e-98 | 302 |
| Msa0534400 | MtrunA17_Chr7g0275431 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 4.74e-97 | 299 |
| Msa0534400 | MtrunA17_Chr3g0109241 | 32.593 | 135 | 83 | 1 | 269 | 395 | 4 | 138 | 2.50e-21 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534400 | AT5G62690.1 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 858 |
| Msa0534400 | AT5G62700.1 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 858 |
| Msa0534400 | AT5G23860.2 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 855 |
| Msa0534400 | AT5G23860.1 | 96.977 | 430 | 13 | 0 | 1 | 430 | 1 | 430 | 0.0 | 855 |
| Msa0534400 | AT5G12250.1 | 95.581 | 430 | 19 | 0 | 1 | 430 | 1 | 430 | 0.0 | 847 |
| Msa0534400 | AT2G29550.1 | 95.360 | 431 | 20 | 0 | 1 | 431 | 1 | 431 | 0.0 | 844 |
| Msa0534400 | AT1G75780.1 | 93.968 | 431 | 25 | 1 | 1 | 430 | 1 | 431 | 0.0 | 838 |
| Msa0534400 | AT5G44340.1 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 833 |
| Msa0534400 | AT4G20890.1 | 93.488 | 430 | 28 | 0 | 1 | 430 | 1 | 430 | 0.0 | 833 |
| Msa0534400 | AT1G20010.1 | 93.271 | 431 | 28 | 1 | 1 | 430 | 1 | 431 | 0.0 | 831 |
| Msa0534400 | AT5G19780.1 | 42.166 | 434 | 241 | 2 | 1 | 424 | 1 | 434 | 5.64e-125 | 370 |
| Msa0534400 | AT5G19770.1 | 42.166 | 434 | 241 | 2 | 1 | 424 | 1 | 434 | 5.64e-125 | 370 |
| Msa0534400 | AT1G64740.1 | 41.935 | 434 | 242 | 2 | 1 | 424 | 1 | 434 | 9.60e-125 | 370 |
| Msa0534400 | AT4G14960.2 | 42.396 | 434 | 240 | 2 | 1 | 424 | 1 | 434 | 4.23e-123 | 366 |
| Msa0534400 | AT1G50010.1 | 42.334 | 437 | 236 | 3 | 1 | 424 | 1 | 434 | 2.82e-122 | 363 |
| Msa0534400 | AT1G04820.1 | 42.334 | 437 | 236 | 3 | 1 | 424 | 1 | 434 | 2.82e-122 | 363 |
| Msa0534400 | AT4G14960.1 | 42.487 | 386 | 212 | 2 | 1 | 376 | 1 | 386 | 1.35e-103 | 315 |
| Msa0534400 | AT5G05620.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 2.51e-97 | 300 |
| Msa0534400 | AT3G61650.1 | 35.388 | 438 | 266 | 7 | 2 | 423 | 3 | 439 | 4.35e-97 | 300 |
Find 158 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCTTCACTTCTTCATGTT+GGG | 0.178713 | 4_1:-9870302 | Msa0534400:CDS |
| AAAATCGAAACCCTAGAAAT+TGG | 0.183368 | 4_1:+9872087 | None:intergenic |
| TCTTCAAATTCCCAATTTCT+AGG | 0.197150 | 4_1:-9872098 | Msa0534400:five_prime_UTR |
| ACAAACCACTTCCCAGAATT+TGG | 0.203956 | 4_1:+9871997 | None:intergenic |
| ACCAAATCGGAGCCAAATTC+TGG | 0.229742 | 4_1:-9872009 | Msa0534400:CDS |
| CGTTCCGAGAGCGGTTCTTA+TGG | 0.248878 | 4_1:-9871873 | Msa0534400:CDS |
| TTCATAATCTCTTTGTTGTT+GGG | 0.272964 | 4_1:-9869660 | Msa0534400:three_prime_UTR |
| AAAGTAAGCATCATCCTATC+TGG | 0.292949 | 4_1:+9870725 | None:intergenic |
| AATTAAATTGCTTACAGCTT+GGG | 0.308906 | 4_1:+9870546 | None:intergenic |
| ACAGTTGATTTCACGTTGTT+TGG | 0.311816 | 4_1:+9870050 | None:intergenic |
| GGATCTTGAACCGGGGACTA+TGG | 0.314562 | 4_1:-9871852 | Msa0534400:CDS |
| AAGATTAAGTTATCTTGTTC+TGG | 0.315532 | 4_1:+9869405 | None:intergenic |
| ATGCCGCAACTTCCTGTTGC+CGG | 0.317833 | 4_1:-9869683 | Msa0534400:three_prime_UTR |
| TATAAGTAGCAATCTATGTT+TGG | 0.328893 | 4_1:-9869519 | Msa0534400:three_prime_UTR |
| GTTCATAATCTCTTTGTTGT+TGG | 0.332718 | 4_1:-9869661 | Msa0534400:three_prime_UTR |
| CCCTGATCTTTGAAATCAAA+AGG | 0.336806 | 4_1:+9870756 | None:intergenic |
| AAGATGGCTTCCACATTCAT+TGG | 0.346607 | 4_1:-9870002 | Msa0534400:CDS |
| TGAAAACAGTGATTGCTTGC+AGG | 0.355551 | 4_1:-9871678 | Msa0534400:CDS |
| TAGGAAGCTTGCAGTGAATC+TGG | 0.356710 | 4_1:-9870336 | Msa0534400:CDS |
| CCCAGAATTTGGCTCCGATT+TGG | 0.356745 | 4_1:+9872008 | None:intergenic |
| CTCAAGCCTCATCATGTTCC+TGG | 0.362588 | 4_1:+9869757 | None:intergenic |
| GTCAGCTAAACTCCGATCTT+AGG | 0.365614 | 4_1:-9870355 | Msa0534400:CDS |
| ATAAGTAGCAATCTATGTTT+GGG | 0.368858 | 4_1:-9869518 | Msa0534400:three_prime_UTR |
| TCGCCTTCACTTCTTCATGT+TGG | 0.381483 | 4_1:-9870303 | Msa0534400:CDS |
| CACATTTGCTGTGTGATCTC+TGG | 0.382312 | 4_1:+9870227 | None:intergenic |
| TTTCTATGTGAGATGTTTGT+AGG | 0.383795 | 4_1:-9869588 | Msa0534400:three_prime_UTR |
| TAAACAATCAAGCTTCTTCA+AGG | 0.390442 | 4_1:+9869487 | None:intergenic |
| CTTGGTGGAGGAACTGGATC+TGG | 0.390493 | 4_1:-9870788 | Msa0534400:CDS |
| GTGAGGTATCGTCCGTGTCT+AGG | 0.392730 | 4_1:+9870173 | None:intergenic |
| CATTCACTTGGTGGAGGAAC+TGG | 0.394644 | 4_1:-9870794 | Msa0534400:CDS |
| GGCAGCACACATCATGTTCT+TGG | 0.397808 | 4_1:+9870199 | None:intergenic |
| GTCGGAATATCAACAATATC+AGG | 0.402139 | 4_1:-9869829 | Msa0534400:CDS |
| AGACCGGATAACTTTGTGTT+TGG | 0.404999 | 4_1:-9871794 | Msa0534400:CDS |
| TACTGCTATGTTCAGGAGAA+AGG | 0.406584 | 4_1:-9869931 | Msa0534400:CDS |
| AGATTAAGTTATCTTGTTCT+GGG | 0.408257 | 4_1:+9869406 | None:intergenic |
| GTTTGTGATATTCCACCAAC+AGG | 0.410840 | 4_1:-9870029 | Msa0534400:CDS |
| ATTCTGTTCTTGATGTTGTT+AGG | 0.411260 | 4_1:-9871709 | Msa0534400:CDS |
| AGAGTGGTGCTGGTAACAAT+TGG | 0.417986 | 4_1:-9871769 | Msa0534400:CDS |
| CAAGAGGTTCTCAGCAGTAC+AGG | 0.422159 | 4_1:-9870262 | Msa0534400:CDS |
| ACTCCTCCTACTTCGTTGAA+TGG | 0.425380 | 4_1:-9870076 | Msa0534400:CDS |
| GGTTCTTATGGATCTTGAAC+CGG | 0.430707 | 4_1:-9871861 | Msa0534400:CDS |
| AGCAGTTTACTGCTATGTTC+AGG | 0.440643 | 4_1:-9869938 | Msa0534400:CDS |
| CGGTGATTCAGATCTGCAAT+TGG | 0.448936 | 4_1:-9871939 | Msa0534400:CDS |
| CTTCAAATTCCCAATTTCTA+GGG | 0.453323 | 4_1:-9872097 | Msa0534400:five_prime_UTR |
| GTGTTTGGTCAGAGTGGTGC+TGG | 0.454211 | 4_1:-9871779 | Msa0534400:CDS |
| AGAGATTATGAACCGGCAAC+AGG | 0.457660 | 4_1:+9869671 | None:intergenic |
| GCTCATCTTGCCTCTGAAGA+TGG | 0.460024 | 4_1:+9870142 | None:intergenic |
| CTGGTAACAATTGGGCTAAA+GGG | 0.461290 | 4_1:-9871760 | Msa0534400:CDS |
| GCTGGTAACAATTGGGCTAA+AGG | 0.464884 | 4_1:-9871761 | Msa0534400:CDS |
| AGCTTGGGGTTGTGAGCTTG+AGG | 0.465163 | 4_1:+9870561 | None:intergenic |
| GGGTTGTGAGCTTGAGGGTA+CGG | 0.468084 | 4_1:+9870567 | None:intergenic |
| CAAGTATGCCATTCACTTGG+TGG | 0.468453 | 4_1:-9870803 | Msa0534400:CDS |
| ACATGTTGTTTGAGGTTCCC+TGG | 0.471364 | 4_1:-9870377 | Msa0534400:CDS |
| AAATCGAAACCCTAGAAATT+GGG | 0.472141 | 4_1:+9872088 | None:intergenic |
| TCATAATCTCTTTGTTGTTG+GGG | 0.473745 | 4_1:-9869659 | Msa0534400:three_prime_UTR |
| AACAGACAAAGTAGCATTGT+AGG | 0.473876 | 4_1:+9870658 | None:intergenic |
| GCCTTCACTTCTTCATGTTG+GGG | 0.476323 | 4_1:-9870301 | Msa0534400:CDS |
| GGAGAAAGGCTTTCTTGCAT+TGG | 0.478824 | 4_1:-9869917 | Msa0534400:CDS |
| TTGATATCAGCAACTATGTC+TGG | 0.479938 | 4_1:-9870404 | Msa0534400:CDS |
| CTGGTGTCACATGTTGTTTG+AGG | 0.483612 | 4_1:-9870385 | Msa0534400:CDS |
| CCAAATCGGAGCCAAATTCT+GGG | 0.485930 | 4_1:-9872008 | Msa0534400:CDS |
| GGATGAGTATGAAGATGAAG+AGG | 0.487277 | 4_1:-9869790 | Msa0534400:CDS |
| CGGAGCCAAATTCTGGGAAG+TGG | 0.489877 | 4_1:-9872002 | Msa0534400:CDS |
| ATTAAATTGCTTACAGCTTG+GGG | 0.491150 | 4_1:+9870547 | None:intergenic |
| AGATCGGAGTTTAGCTGACC+AGG | 0.493352 | 4_1:+9870359 | None:intergenic |
| GGTCAATGCGGTAACCAAAT+CGG | 0.495002 | 4_1:-9872022 | Msa0534400:CDS |
| AAGAAGTGAAGGCGAGGGAA+TGG | 0.496668 | 4_1:+9870311 | None:intergenic |
| CCTGATCTTTGAAATCAAAA+GGG | 0.497319 | 4_1:+9870757 | None:intergenic |
| TGAGTATGAAGATGAAGAGG+AGG | 0.497865 | 4_1:-9869787 | Msa0534400:CDS |
| ACTATGGACAGTGTCCGGTC+TGG | 0.498129 | 4_1:-9871836 | Msa0534400:CDS |
| GGAGGAACTGGATCTGGAAT+GGG | 0.502255 | 4_1:-9870782 | Msa0534400:CDS |
| CAGAGATCACACAGCAAATG+TGG | 0.502624 | 4_1:-9870226 | Msa0534400:CDS |
| TGAGGTATCGTCCGTGTCTA+GGG | 0.503135 | 4_1:+9870174 | None:intergenic |
| CAGTTCCTCCACCAAGTGAA+TGG | 0.504167 | 4_1:+9870795 | None:intergenic |
| TCCACCAACAGGGTTGAAGA+TGG | 0.506013 | 4_1:-9870018 | Msa0534400:CDS |
| GTTCTTATGGATCTTGAACC+GGG | 0.506353 | 4_1:-9871860 | Msa0534400:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.506815 | 4_1:-9869909 | Msa0534400:CDS |
| TCAGGGAAGAATACCCAGAT+AGG | 0.508115 | 4_1:-9870739 | Msa0534400:CDS |
| GCTTGGGGTTGTGAGCTTGA+GGG | 0.508788 | 4_1:+9870562 | None:intergenic |
| TTGCATTGGTACACTGGTGA+AGG | 0.510492 | 4_1:-9869903 | Msa0534400:CDS |
| TAAACTGCTCACTCACCCTT+CGG | 0.511089 | 4_1:+9869952 | None:intergenic |
| GTGTTACACATATTCCATCT+AGG | 0.517837 | 4_1:+9869709 | None:intergenic |
| CACTGCAAGCTTCCTAAGAT+CGG | 0.518766 | 4_1:+9870343 | None:intergenic |
| GAAAACAGTGATTGCTTGCA+GGG | 0.518786 | 4_1:-9871677 | Msa0534400:intron |
| ACATAGTTGCTGATATCAAA+TGG | 0.520185 | 4_1:+9870408 | None:intergenic |
| TGGGGTTAGAAAATGAAGGT+TGG | 0.521060 | 4_1:+9872172 | None:intergenic |
| TGACCAAACACAAAGTTATC+CGG | 0.525289 | 4_1:+9871791 | None:intergenic |
| TGGAGGAACTGGATCTGGAA+TGG | 0.526615 | 4_1:-9870783 | Msa0534400:CDS |
| GCCATCTTCAACCCTGTTGG+TGG | 0.528481 | 4_1:+9870017 | None:intergenic |
| TTCTATGTGAGATGTTTGTA+GGG | 0.529518 | 4_1:-9869587 | Msa0534400:three_prime_UTR |
| GAGTGGTGCTGGTAACAATT+GGG | 0.533887 | 4_1:-9871768 | Msa0534400:CDS |
| TGAAAACGCAGATGAATGTA+TGG | 0.535240 | 4_1:-9870624 | Msa0534400:CDS |
| TGGAATCCATTCAACGAAGT+AGG | 0.538111 | 4_1:+9870070 | None:intergenic |
| AACTTTGTGTTTGGTCAGAG+TGG | 0.539264 | 4_1:-9871785 | Msa0534400:CDS |
| CGGGGACTATGGACAGTGTC+CGG | 0.540353 | 4_1:-9871841 | Msa0534400:CDS |
| CATAATCTCTTTGTTGTTGG+GGG | 0.540537 | 4_1:-9869658 | Msa0534400:three_prime_UTR |
| TTTGCACCTTTGACTTCAAG+AGG | 0.541243 | 4_1:-9870278 | Msa0534400:CDS |
| TGAATCACCGACGTAACGAC+CGG | 0.547896 | 4_1:+9871952 | None:intergenic |
| TCCTAAGGTTTCTGACACTG+TGG | 0.549921 | 4_1:-9870687 | Msa0534400:CDS |
| GTGTCAGAAACCTTAGGAGA+AGG | 0.550838 | 4_1:+9870692 | None:intergenic |
| GAACATGGAATCGATCCAAC+CGG | 0.553550 | 4_1:-9871971 | Msa0534400:CDS |
| TTGGTACACTGGTGAAGGAA+TGG | 0.562019 | 4_1:-9869898 | Msa0534400:CDS |
| ACAACAAAGAGATTATGAAC+CGG | 0.563426 | 4_1:+9869664 | None:intergenic |
| TTTCAAGTATGCCATTCACT+TGG | 0.563572 | 4_1:-9870806 | Msa0534400:CDS |
| AAGTAAGCATCATCCTATCT+GGG | 0.568440 | 4_1:+9870726 | None:intergenic |
| AAGAGGTTCTCAGCAGTACA+GGG | 0.571950 | 4_1:-9870261 | Msa0534400:CDS |
| AGAGAAATTCTTCACATCCA+AGG | 0.578420 | 4_1:-9872046 | Msa0534400:CDS |
| AGTGTCCGGTCTGGACCGTA+CGG | 0.581065 | 4_1:-9871827 | Msa0534400:CDS |
| AGATCCATAAGAACCGCTCT+CGG | 0.582689 | 4_1:+9871869 | None:intergenic |
| TGAGAACCTCTTGAAGTCAA+AGG | 0.582877 | 4_1:+9870272 | None:intergenic |
| TCACCGACGTAACGACCGGT+TGG | 0.584567 | 4_1:+9871956 | None:intergenic |
| ACCACAGTGTCAGAAACCTT+AGG | 0.586612 | 4_1:+9870686 | None:intergenic |
| TCAGGATGCTACTGCAGAGG+AGG | 0.588706 | 4_1:-9869811 | Msa0534400:CDS |
| ACCCCAACATGAAGAAGTGA+AGG | 0.588926 | 4_1:+9870300 | None:intergenic |
| TGGAAGGTTCGTTCCGAGAG+CGG | 0.591557 | 4_1:-9871882 | Msa0534400:CDS |
| GAAGCCATCTTCAACCCTGT+TGG | 0.594921 | 4_1:+9870014 | None:intergenic |
| CAATTCAAGAAATGTTCCGA+AGG | 0.595372 | 4_1:-9869968 | Msa0534400:CDS |
| TGTCAGAAACCTTAGGAGAA+GGG | 0.599265 | 4_1:+9870693 | None:intergenic |
| AATTCAAGAAATGTTCCGAA+GGG | 0.601207 | 4_1:-9869967 | Msa0534400:CDS |
| TGGTGAAGGAATGGATGAGA+TGG | 0.601920 | 4_1:-9869889 | Msa0534400:CDS |
| GGTTACCGCATTGACCACCT+TGG | 0.605212 | 4_1:+9872029 | None:intergenic |
| TTCTTATGGATCTTGAACCG+GGG | 0.606048 | 4_1:-9871859 | Msa0534400:CDS |
| ACAGACAAAGTAGCATTGTA+GGG | 0.608931 | 4_1:+9870659 | None:intergenic |
| TCTGACCGTACGGTCCAGAC+CGG | 0.610666 | 4_1:+9871822 | None:intergenic |
| ACTGCATCAGCCATCTTCAG+AGG | 0.610984 | 4_1:-9870152 | Msa0534400:CDS |
| ACAATGAAGCAAGTGGTGGA+AGG | 0.616621 | 4_1:-9871898 | Msa0534400:CDS |
| CAACATGAATGATCTTGTGT+CGG | 0.617924 | 4_1:-9869847 | Msa0534400:CDS |
| GTATGCCATTCACTTGGTGG+AGG | 0.619872 | 4_1:-9870800 | Msa0534400:CDS |
| CAGGAACATGATGAGGCTTG+AGG | 0.620065 | 4_1:-9869756 | Msa0534400:exon |
| TTTGTGGGGTTAGAAAATGA+AGG | 0.620537 | 4_1:+9872168 | None:intergenic |
| TGAAGAGGAGGATTATCACC+AGG | 0.622769 | 4_1:-9869775 | Msa0534400:CDS |
| AGTTGAGTTTCCAATGAATG+TGG | 0.624190 | 4_1:+9869992 | None:intergenic |
| GAACCGGCAACAGGAAGTTG+CGG | 0.624660 | 4_1:+9869680 | None:intergenic |
| GAAGTGGTTTGTGCTGAACA+TGG | 0.625902 | 4_1:-9871986 | Msa0534400:CDS |
| AACATGAAGAAGTGAAGGCG+AGG | 0.627650 | 4_1:+9870305 | None:intergenic |
| ATTCAGATCTGCAATTGGAA+CGG | 0.628300 | 4_1:-9871934 | Msa0534400:CDS |
| CGGACACTGTCCATAGTCCC+CGG | 0.628364 | 4_1:+9871842 | None:intergenic |
| GCTAAAGGGCATTATACTGA+AGG | 0.629394 | 4_1:-9871746 | Msa0534400:CDS |
| ACGGAAGCAAATATCATACA+AGG | 0.631307 | 4_1:+9870586 | None:intergenic |
| AATCCATTCAACGAAGTAGG+AGG | 0.631398 | 4_1:+9870073 | None:intergenic |
| GTATCGTCCGTGTCTAGGGT+CGG | 0.633110 | 4_1:+9870178 | None:intergenic |
| GTACGGTCAGATCTTTAGAC+CGG | 0.637619 | 4_1:-9871810 | Msa0534400:CDS |
| CACATCCAAGGTGGTCAATG+CGG | 0.639870 | 4_1:-9872034 | Msa0534400:CDS |
| AGAGATCACACAGCAAATGT+GGG | 0.647959 | 4_1:-9870225 | Msa0534400:CDS |
| ACATGAAGAAGTGAAGGCGA+GGG | 0.651021 | 4_1:+9870306 | None:intergenic |
| GGTCTAAAGATCTGACCGTA+CGG | 0.651719 | 4_1:+9871812 | None:intergenic |
| ATATCAGGATGCTACTGCAG+AGG | 0.652975 | 4_1:-9869814 | Msa0534400:CDS |
| TATTACAATGAAGCAAGTGG+TGG | 0.660724 | 4_1:-9871902 | Msa0534400:CDS |
| TTATCACCAGGAACATGATG+AGG | 0.661770 | 4_1:-9869763 | Msa0534400:CDS |
| TTTGTGATATTCCACCAACA+GGG | 0.665479 | 4_1:-9870028 | Msa0534400:CDS |
| CAGAGGCAAGATGAGCACAA+AGG | 0.668708 | 4_1:-9870135 | Msa0534400:CDS |
| TGTGCTGCCGACCCTAGACA+CGG | 0.672597 | 4_1:-9870185 | Msa0534400:CDS |
| GATCCAACCGGTCGTTACGT+CGG | 0.675174 | 4_1:-9871959 | Msa0534400:CDS |
| GATCGGAGTTTAGCTGACCA+GGG | 0.686480 | 4_1:+9870360 | None:intergenic |
| GTGTATTACAATGAAGCAAG+TGG | 0.700863 | 4_1:-9871905 | Msa0534400:CDS |
| GAAATTCTTCACATCCAAGG+TGG | 0.729084 | 4_1:-9872043 | Msa0534400:CDS |
| TGAAGATGGCTGATGCAGTG+AGG | 0.739156 | 4_1:+9870156 | None:intergenic |
| GGATGAGATGGAGTTCACTG+AGG | 0.802592 | 4_1:-9869877 | Msa0534400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTTAAATTT+AGG | - | chr4_1:9869993-9870012 | Msa0534400:CDS | 0.0% |
| !!! | TTATTTTATTTTTAAATTTA+GGG | - | chr4_1:9869994-9870013 | Msa0534400:CDS | 0.0% |
| !! | GAAAAAATGTATTGAAATTT+GGG | + | chr4_1:9869418-9869437 | None:intergenic | 15.0% |
| !! | TTATTTACAAATTGTGAATT+CGG | - | chr4_1:9870312-9870331 | Msa0534400:CDS | 15.0% |
| !!! | ATTGTTTTCTAAGTTTATAA+TGG | - | chr4_1:9870501-9870520 | Msa0534400:intron | 15.0% |
| !! | GGAAAAAATGTATTGAAATT+TGG | + | chr4_1:9869419-9869438 | None:intergenic | 20.0% |
| !!! | AAATGAGTTTTTTGTTTTGT+GGG | + | chr4_1:9869473-9869492 | None:intergenic | 20.0% |
| !!! | ATTTCTCTCATTTTGATTTT+GGG | + | chr4_1:9869565-9869584 | None:intergenic | 20.0% |
| !!! | AATTTCTCTCATTTTGATTT+TGG | + | chr4_1:9869566-9869585 | None:intergenic | 20.0% |
| !!! | TATTTTGCATGATTTTTAAC+TGG | - | chr4_1:9870078-9870097 | Msa0534400:CDS | 20.0% |
| !!! | CAGTTTTATTAAAAAAGAAG+AGG | + | chr4_1:9870265-9870284 | None:intergenic | 20.0% |
| !! | ATAGTTTATCCTTTACATAA+AGG | + | chr4_1:9870549-9870568 | None:intergenic | 20.0% |
| !! | TATAAACTATTATTGTTCTG+TGG | - | chr4_1:9870566-9870585 | Msa0534400:CDS | 20.0% |
| !!! | GATGTTTGTTTTTTATGTAA+AGG | - | chr4_1:9870769-9870788 | Msa0534400:CDS | 20.0% |
| !! | TTATGTAAAGGATAAACAAT+TGG | - | chr4_1:9870781-9870800 | Msa0534400:CDS | 20.0% |
| !!! | TTTTTTTGTGTTTGTTACTA+TGG | - | chr4_1:9871147-9871166 | Msa0534400:intron | 20.0% |
| !!! | GAAGGTTGGTTTTTTATATA+GGG | + | chr4_1:9869440-9869459 | None:intergenic | 25.0% |
| !!! | TGAAGGTTGGTTTTTTATAT+AGG | + | chr4_1:9869441-9869460 | None:intergenic | 25.0% |
| !!! | AATGAGTTTTTTGTTTTGTG+GGG | + | chr4_1:9869472-9869491 | None:intergenic | 25.0% |
| !!! | GAAATGAGTTTTTTGTTTTG+TGG | + | chr4_1:9869474-9869493 | None:intergenic | 25.0% |
| !! | TTTAACTGGATCTGAAATTT+AGG | - | chr4_1:9870092-9870111 | Msa0534400:CDS | 25.0% |
| !! | TTAACTGGATCTGAAATTTA+GGG | - | chr4_1:9870093-9870112 | Msa0534400:CDS | 25.0% |
| !!! | AGGGTTTTCTTTTTTATGTA+TGG | - | chr4_1:9870112-9870131 | Msa0534400:CDS | 25.0% |
| ! | TATATGATATGAAATTGTGC+TGG | - | chr4_1:9870157-9870176 | Msa0534400:CDS | 25.0% |
| ! | TTTAATAAAACTGTAGCCAA+AGG | - | chr4_1:9870272-9870291 | Msa0534400:CDS | 25.0% |
| ! | TTAATAAAACTGTAGCCAAA+GGG | - | chr4_1:9870273-9870292 | Msa0534400:CDS | 25.0% |
| ! | ATATTACCTTTGATCTTTGA+TGG | - | chr4_1:9870349-9870368 | Msa0534400:CDS | 25.0% |
| !!! | ATTGTGGGTGATTTTTTAAT+TGG | - | chr4_1:9870400-9870419 | Msa0534400:CDS | 25.0% |
| !!! | TTGTGGGTGATTTTTTAATT+GGG | - | chr4_1:9870401-9870420 | Msa0534400:CDS | 25.0% |
| !! | TCAAGTTTCGAACTTTTAAT+AGG | + | chr4_1:9870646-9870665 | None:intergenic | 25.0% |
| ! | GAGGGTAAAATAAATCAAAT+TGG | + | chr4_1:9870692-9870711 | None:intergenic | 25.0% |
| ! | AATTAAATTGCTTACAGCTT+GGG | + | chr4_1:9871080-9871099 | None:intergenic | 25.0% |
| ! | AAATTAAATTGCTTACAGCT+TGG | + | chr4_1:9871081-9871100 | None:intergenic | 25.0% |
| ! | GAAAGAAGTCATTCAAAAAA+GGG | + | chr4_1:9871108-9871127 | None:intergenic | 25.0% |
| ! | TGAAAGAAGTCATTCAAAAA+AGG | + | chr4_1:9871109-9871128 | None:intergenic | 25.0% |
| !!! | TTCATAATCTCTTTGTTGTT+GGG | - | chr4_1:9871963-9871982 | Msa0534400:CDS | 25.0% |
| ! | TATAAGTAGCAATCTATGTT+TGG | - | chr4_1:9872104-9872123 | Msa0534400:five_prime_UTR | 25.0% |
| ! | ATAAGTAGCAATCTATGTTT+GGG | - | chr4_1:9872105-9872124 | Msa0534400:five_prime_UTR | 25.0% |
| ! | AGATTAAGTTATCTTGTTCT+GGG | + | chr4_1:9872220-9872239 | None:intergenic | 25.0% |
| ! | AAGATTAAGTTATCTTGTTC+TGG | + | chr4_1:9872221-9872240 | None:intergenic | 25.0% |
| TCTTCAAATTCCCAATTTCT+AGG | - | chr4_1:9869525-9869544 | Msa0534400:three_prime_UTR | 30.0% | |
| CTTCAAATTCCCAATTTCTA+GGG | - | chr4_1:9869526-9869545 | Msa0534400:three_prime_UTR | 30.0% | |
| AAATCGAAACCCTAGAAATT+GGG | + | chr4_1:9869538-9869557 | None:intergenic | 30.0% | |
| AAAATCGAAACCCTAGAAAT+TGG | + | chr4_1:9869539-9869558 | None:intergenic | 30.0% | |
| ATTCTGTTCTTGATGTTGTT+AGG | - | chr4_1:9869914-9869933 | Msa0534400:CDS | 30.0% | |
| CATGCAAAATATACGACATA+TGG | + | chr4_1:9870069-9870088 | None:intergenic | 30.0% | |
| !! | AAACTTTGATTTGCTTTGCA+GGG | - | chr4_1:9870213-9870232 | Msa0534400:CDS | 30.0% |
| !!! | TGTGGGTGATTTTTTAATTG+GGG | - | chr4_1:9870402-9870421 | Msa0534400:CDS | 30.0% |
| ! | TAATTGGGGTGTTCTATAAA+AGG | - | chr4_1:9870416-9870435 | Msa0534400:CDS | 30.0% |
| GATGTTTGTCCTTTATGTAA+AGG | - | chr4_1:9870537-9870556 | Msa0534400:intron | 30.0% | |
| ! | TGTGTGTGTGATTTTGAATT+AGG | - | chr4_1:9870606-9870625 | Msa0534400:CDS | 30.0% |
| ! | GTGTGTGTGATTTTGAATTA+GGG | - | chr4_1:9870607-9870626 | Msa0534400:CDS | 30.0% |
| TTGAATGCCATGTTGTTAAT+TGG | - | chr4_1:9870662-9870681 | Msa0534400:CDS | 30.0% | |
| TGAATGCCATGTTGTTAATT+GGG | - | chr4_1:9870663-9870682 | Msa0534400:CDS | 30.0% | |
| !!! | GACTAACGTTCTTGTTTTTT+AGG | - | chr4_1:9870741-9870760 | Msa0534400:CDS | 30.0% |
| !! | CCTGATCTTTGAAATCAAAA+GGG | + | chr4_1:9870869-9870888 | None:intergenic | 30.0% |
| !!! | CCTTTTGATTTCAAAGATCA+GGG | - | chr4_1:9870867-9870886 | Msa0534400:intron | 30.0% |
| ATTAAATTGCTTACAGCTTG+GGG | + | chr4_1:9871079-9871098 | None:intergenic | 30.0% | |
| ACATAGTTGCTGATATCAAA+TGG | + | chr4_1:9871218-9871237 | None:intergenic | 30.0% | |
| AATTCAAGAAATGTTCCGAA+GGG | - | chr4_1:9871656-9871675 | Msa0534400:intron | 30.0% | |
| ACAACAAAGAGATTATGAAC+CGG | + | chr4_1:9871962-9871981 | None:intergenic | 30.0% | |
| ! | GTTCATAATCTCTTTGTTGT+TGG | - | chr4_1:9871962-9871981 | Msa0534400:CDS | 30.0% |
| !! | TCATAATCTCTTTGTTGTTG+GGG | - | chr4_1:9871964-9871983 | Msa0534400:CDS | 30.0% |
| TTTCTATGTGAGATGTTTGT+AGG | - | chr4_1:9872035-9872054 | Msa0534400:CDS | 30.0% | |
| TTCTATGTGAGATGTTTGTA+GGG | - | chr4_1:9872036-9872055 | Msa0534400:CDS | 30.0% | |
| TAAACAATCAAGCTTCTTCA+AGG | + | chr4_1:9872139-9872158 | None:intergenic | 30.0% | |
| TTTGTGGGGTTAGAAAATGA+AGG | + | chr4_1:9869458-9869477 | None:intergenic | 35.0% | |
| AGAGAAATTCTTCACATCCA+AGG | - | chr4_1:9869577-9869596 | Msa0534400:three_prime_UTR | 35.0% | |
| ATTCAGATCTGCAATTGGAA+CGG | - | chr4_1:9869689-9869708 | Msa0534400:three_prime_UTR | 35.0% | |
| GTGTATTACAATGAAGCAAG+TGG | - | chr4_1:9869718-9869737 | Msa0534400:three_prime_UTR | 35.0% | |
| TATTACAATGAAGCAAGTGG+TGG | - | chr4_1:9869721-9869740 | Msa0534400:three_prime_UTR | 35.0% | |
| TGACCAAACACAAAGTTATC+CGG | + | chr4_1:9869835-9869854 | None:intergenic | 35.0% | |
| !!! | TAGGGTTTAAGAGTGTTTTG+TGG | - | chr4_1:9870012-9870031 | Msa0534400:CDS | 35.0% |
| !!! | AGGGTTTAAGAGTGTTTTGT+GGG | - | chr4_1:9870013-9870032 | Msa0534400:CDS | 35.0% |
| !! | GAAACTTTGATTTGCTTTGC+AGG | - | chr4_1:9870212-9870231 | Msa0534400:CDS | 35.0% |
| TTACCTTTGATCTTTGATGG+AGG | - | chr4_1:9870352-9870371 | Msa0534400:CDS | 35.0% | |
| TACCTTTGATCTTTGATGGA+GGG | - | chr4_1:9870353-9870372 | Msa0534400:CDS | 35.0% | |
| !! | TGATGGAGGGATTACTTTTA+TGG | - | chr4_1:9870366-9870385 | Msa0534400:CDS | 35.0% |
| !! | GATGGAGGGATTACTTTTAT+GGG | - | chr4_1:9870367-9870386 | Msa0534400:CDS | 35.0% |
| TGGAATCCCAATTAACAACA+TGG | + | chr4_1:9870672-9870691 | None:intergenic | 35.0% | |
| CGAATGTTGGTATTTCATGA+GGG | + | chr4_1:9870710-9870729 | None:intergenic | 35.0% | |
| CCTCATGAAATACCAACATT+CGG | - | chr4_1:9870708-9870727 | Msa0534400:CDS | 35.0% | |
| CTCATGAAATACCAACATTC+GGG | - | chr4_1:9870709-9870728 | Msa0534400:CDS | 35.0% | |
| TCATGAAATACCAACATTCG+GGG | - | chr4_1:9870710-9870729 | Msa0534400:CDS | 35.0% | |
| ! | TTTCAAGTATGCCATTCACT+TGG | - | chr4_1:9870817-9870836 | Msa0534400:intron | 35.0% |
| !!! | CCCTTTTGATTTCAAAGATC+AGG | - | chr4_1:9870866-9870885 | Msa0534400:intron | 35.0% |
| !! | CCCTGATCTTTGAAATCAAA+AGG | + | chr4_1:9870870-9870889 | None:intergenic | 35.0% |
| AAGTAAGCATCATCCTATCT+GGG | + | chr4_1:9870900-9870919 | None:intergenic | 35.0% | |
| AAAGTAAGCATCATCCTATC+TGG | + | chr4_1:9870901-9870920 | None:intergenic | 35.0% | |
| ACAGACAAAGTAGCATTGTA+GGG | + | chr4_1:9870967-9870986 | None:intergenic | 35.0% | |
| AACAGACAAAGTAGCATTGT+AGG | + | chr4_1:9870968-9870987 | None:intergenic | 35.0% | |
| TGAAAACGCAGATGAATGTA+TGG | - | chr4_1:9870999-9871018 | Msa0534400:intron | 35.0% | |
| ACGGAAGCAAATATCATACA+AGG | + | chr4_1:9871040-9871059 | None:intergenic | 35.0% | |
| ! | TTGATCTTTTGTGTTGCAGT+TGG | - | chr4_1:9871183-9871202 | Msa0534400:intron | 35.0% |
| TTGATATCAGCAACTATGTC+TGG | - | chr4_1:9871219-9871238 | Msa0534400:intron | 35.0% | |
| ! | ACAGTTGATTTCACGTTGTT+TGG | + | chr4_1:9871576-9871595 | None:intergenic | 35.0% |
| TTTGTGATATTCCACCAACA+GGG | - | chr4_1:9871595-9871614 | Msa0534400:intron | 35.0% | |
| AGTTGAGTTTCCAATGAATG+TGG | + | chr4_1:9871634-9871653 | None:intergenic | 35.0% | |
| CAATTCAAGAAATGTTCCGA+AGG | - | chr4_1:9871655-9871674 | Msa0534400:intron | 35.0% | |
| CAACATGAATGATCTTGTGT+CGG | - | chr4_1:9871776-9871795 | Msa0534400:CDS | 35.0% | |
| GTCGGAATATCAACAATATC+AGG | - | chr4_1:9871794-9871813 | Msa0534400:CDS | 35.0% | |
| GTGTTACACATATTCCATCT+AGG | + | chr4_1:9871917-9871936 | None:intergenic | 35.0% | |
| !! | CATAATCTCTTTGTTGTTGG+GGG | - | chr4_1:9871965-9871984 | Msa0534400:CDS | 35.0% |
| ! | GATTGCTGCTTAAAAAGTGT+TGG | + | chr4_1:9872170-9872189 | None:intergenic | 35.0% |
| TGGGGTTAGAAAATGAAGGT+TGG | + | chr4_1:9869454-9869473 | None:intergenic | 40.0% | |
| GAAATTCTTCACATCCAAGG+TGG | - | chr4_1:9869580-9869599 | Msa0534400:three_prime_UTR | 40.0% | |
| ACAAACCACTTCCCAGAATT+TGG | + | chr4_1:9869629-9869648 | None:intergenic | 40.0% | |
| GGTTCTTATGGATCTTGAAC+CGG | - | chr4_1:9869762-9869781 | Msa0534400:CDS | 40.0% | |
| GTTCTTATGGATCTTGAACC+GGG | - | chr4_1:9869763-9869782 | Msa0534400:CDS | 40.0% | |
| TTCTTATGGATCTTGAACCG+GGG | - | chr4_1:9869764-9869783 | Msa0534400:CDS | 40.0% | |
| AGACCGGATAACTTTGTGTT+TGG | - | chr4_1:9869829-9869848 | Msa0534400:CDS | 40.0% | |
| AACTTTGTGTTTGGTCAGAG+TGG | - | chr4_1:9869838-9869857 | Msa0534400:CDS | 40.0% | |
| CTGGTAACAATTGGGCTAAA+GGG | - | chr4_1:9869863-9869882 | Msa0534400:CDS | 40.0% | |
| !! | GCTAAAGGGCATTATACTGA+AGG | - | chr4_1:9869877-9869896 | Msa0534400:CDS | 40.0% |
| TGAAAACAGTGATTGCTTGC+AGG | - | chr4_1:9869945-9869964 | Msa0534400:CDS | 40.0% | |
| GAAAACAGTGATTGCTTGCA+GGG | - | chr4_1:9869946-9869965 | Msa0534400:CDS | 40.0% | |
| ! | CATTTTGTGTGCAAAGAAGC+TGG | - | chr4_1:9870190-9870209 | Msa0534400:CDS | 40.0% |
| CATACAAACGATACACCCTT+TGG | + | chr4_1:9870291-9870310 | None:intergenic | 40.0% | |
| !! | CAAATTGTGAATTCGGTGTG+TGG | - | chr4_1:9870319-9870338 | Msa0534400:CDS | 40.0% |
| ATCCCTCCATCAAAGATCAA+AGG | + | chr4_1:9870358-9870377 | None:intergenic | 40.0% | |
| ! | TATGGGTTTCGCAAGTATTG+TGG | - | chr4_1:9870384-9870403 | Msa0534400:CDS | 40.0% |
| ! | ATGGGTTTCGCAAGTATTGT+GGG | - | chr4_1:9870385-9870404 | Msa0534400:CDS | 40.0% |
| CCGAATGTTGGTATTTCATG+AGG | + | chr4_1:9870711-9870730 | None:intergenic | 40.0% | |
| TAAACAATTGGTGTGTGTGC+AGG | - | chr4_1:9870793-9870812 | Msa0534400:CDS | 40.0% | |
| TGTCAGAAACCTTAGGAGAA+GGG | + | chr4_1:9870933-9870952 | None:intergenic | 40.0% | |
| ! | TTTGCACCTTTGACTTCAAG+AGG | - | chr4_1:9871345-9871364 | Msa0534400:intron | 40.0% |
| TGAGAACCTCTTGAAGTCAA+AGG | + | chr4_1:9871354-9871373 | None:intergenic | 40.0% | |
| AGAGATCACACAGCAAATGT+GGG | - | chr4_1:9871398-9871417 | Msa0534400:intron | 40.0% | |
| AATCCATTCAACGAAGTAGG+AGG | + | chr4_1:9871553-9871572 | None:intergenic | 40.0% | |
| TGGAATCCATTCAACGAAGT+AGG | + | chr4_1:9871556-9871575 | None:intergenic | 40.0% | |
| GTTTGTGATATTCCACCAAC+AGG | - | chr4_1:9871594-9871613 | Msa0534400:intron | 40.0% | |
| AAGATGGCTTCCACATTCAT+TGG | - | chr4_1:9871621-9871640 | Msa0534400:intron | 40.0% | |
| AGCAGTTTACTGCTATGTTC+AGG | - | chr4_1:9871685-9871704 | Msa0534400:CDS | 40.0% | |
| TACTGCTATGTTCAGGAGAA+AGG | - | chr4_1:9871692-9871711 | Msa0534400:CDS | 40.0% | |
| GGATGAGTATGAAGATGAAG+AGG | - | chr4_1:9871833-9871852 | Msa0534400:CDS | 40.0% | |
| TGAGTATGAAGATGAAGAGG+AGG | - | chr4_1:9871836-9871855 | Msa0534400:CDS | 40.0% | |
| TTATCACCAGGAACATGATG+AGG | - | chr4_1:9871860-9871879 | Msa0534400:CDS | 40.0% | |
| ! | TGAGGCTTGTGATCTTTTTG+CGG | - | chr4_1:9871885-9871904 | Msa0534400:CDS | 40.0% |
| GGTCAATGCGGTAACCAAAT+CGG | - | chr4_1:9869601-9869620 | Msa0534400:three_prime_UTR | 45.0% | |
| ACCAAATCGGAGCCAAATTC+TGG | - | chr4_1:9869614-9869633 | Msa0534400:three_prime_UTR | 45.0% | |
| CCAAATCGGAGCCAAATTCT+GGG | - | chr4_1:9869615-9869634 | Msa0534400:three_prime_UTR | 45.0% | |
| ! | GAAGTGGTTTGTGCTGAACA+TGG | - | chr4_1:9869637-9869656 | Msa0534400:three_prime_UTR | 45.0% |
| GAACATGGAATCGATCCAAC+CGG | - | chr4_1:9869652-9869671 | Msa0534400:three_prime_UTR | 45.0% | |
| CGGTGATTCAGATCTGCAAT+TGG | - | chr4_1:9869684-9869703 | Msa0534400:three_prime_UTR | 45.0% | |
| ! | ACAATGAAGCAAGTGGTGGA+AGG | - | chr4_1:9869725-9869744 | Msa0534400:three_prime_UTR | 45.0% |
| AGATCCATAAGAACCGCTCT+CGG | + | chr4_1:9869757-9869776 | None:intergenic | 45.0% | |
| GGTCTAAAGATCTGACCGTA+CGG | + | chr4_1:9869814-9869833 | None:intergenic | 45.0% | |
| GTACGGTCAGATCTTTAGAC+CGG | - | chr4_1:9869813-9869832 | Msa0534400:CDS | 45.0% | |
| !! | AGAGTGGTGCTGGTAACAAT+TGG | - | chr4_1:9869854-9869873 | Msa0534400:CDS | 45.0% |
| !! | GAGTGGTGCTGGTAACAATT+GGG | - | chr4_1:9869855-9869874 | Msa0534400:CDS | 45.0% |
| GCTGGTAACAATTGGGCTAA+AGG | - | chr4_1:9869862-9869881 | Msa0534400:CDS | 45.0% | |
| TCATCATGAACCCCGAATGT+TGG | + | chr4_1:9870723-9870742 | None:intergenic | 45.0% | |
| CAAGTATGCCATTCACTTGG+TGG | - | chr4_1:9870820-9870839 | Msa0534400:intron | 45.0% | |
| TCAGGGAAGAATACCCAGAT+AGG | - | chr4_1:9870884-9870903 | Msa0534400:intron | 45.0% | |
| ! | CTCTGTTTTCCCTTCTCCTA+AGG | - | chr4_1:9870921-9870940 | Msa0534400:intron | 45.0% |
| GTGTCAGAAACCTTAGGAGA+AGG | + | chr4_1:9870934-9870953 | None:intergenic | 45.0% | |
| TCCTAAGGTTTCTGACACTG+TGG | - | chr4_1:9870936-9870955 | Msa0534400:intron | 45.0% | |
| ACCACAGTGTCAGAAACCTT+AGG | + | chr4_1:9870940-9870959 | None:intergenic | 45.0% | |
| ! | CATCTGCGTTTTCAACAAGC+TGG | + | chr4_1:9870993-9871012 | None:intergenic | 45.0% |
| !! | CTGGTGTCACATGTTGTTTG+AGG | - | chr4_1:9871238-9871257 | Msa0534400:intron | 45.0% |
| ! | ACATGTTGTTTGAGGTTCCC+TGG | - | chr4_1:9871246-9871265 | Msa0534400:intron | 45.0% |
| GTCAGCTAAACTCCGATCTT+AGG | - | chr4_1:9871268-9871287 | Msa0534400:intron | 45.0% | |
| CACTGCAAGCTTCCTAAGAT+CGG | + | chr4_1:9871283-9871302 | None:intergenic | 45.0% | |
| TAGGAAGCTTGCAGTGAATC+TGG | - | chr4_1:9871287-9871306 | Msa0534400:intron | 45.0% | |
| ACATGAAGAAGTGAAGGCGA+GGG | + | chr4_1:9871320-9871339 | None:intergenic | 45.0% | |
| AACATGAAGAAGTGAAGGCG+AGG | + | chr4_1:9871321-9871340 | None:intergenic | 45.0% | |
| TCGCCTTCACTTCTTCATGT+TGG | - | chr4_1:9871320-9871339 | Msa0534400:intron | 45.0% | |
| CGCCTTCACTTCTTCATGTT+GGG | - | chr4_1:9871321-9871340 | Msa0534400:intron | 45.0% | |
| GCCTTCACTTCTTCATGTTG+GGG | - | chr4_1:9871322-9871341 | Msa0534400:intron | 45.0% | |
| ACCCCAACATGAAGAAGTGA+AGG | + | chr4_1:9871326-9871345 | None:intergenic | 45.0% | |
| AAGAGGTTCTCAGCAGTACA+GGG | - | chr4_1:9871362-9871381 | Msa0534400:intron | 45.0% | |
| !! | CACATTTGCTGTGTGATCTC+TGG | + | chr4_1:9871399-9871418 | None:intergenic | 45.0% |
| CAGAGATCACACAGCAAATG+TGG | - | chr4_1:9871397-9871416 | Msa0534400:intron | 45.0% | |
| ACTCCTCCTACTTCGTTGAA+TGG | - | chr4_1:9871547-9871566 | Msa0534400:intron | 45.0% | |
| TAAACTGCTCACTCACCCTT+CGG | + | chr4_1:9871674-9871693 | None:intergenic | 45.0% | |
| GGAGAAAGGCTTTCTTGCAT+TGG | - | chr4_1:9871706-9871725 | Msa0534400:CDS | 45.0% | |
| ! | GCTTTCTTGCATTGGTACAC+TGG | - | chr4_1:9871714-9871733 | Msa0534400:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | - | chr4_1:9871720-9871739 | Msa0534400:CDS | 45.0% |
| TTGGTACACTGGTGAAGGAA+TGG | - | chr4_1:9871725-9871744 | Msa0534400:CDS | 45.0% | |
| TGGTGAAGGAATGGATGAGA+TGG | - | chr4_1:9871734-9871753 | Msa0534400:CDS | 45.0% | |
| ATATCAGGATGCTACTGCAG+AGG | - | chr4_1:9871809-9871828 | Msa0534400:CDS | 45.0% | |
| TGAAGAGGAGGATTATCACC+AGG | - | chr4_1:9871848-9871867 | Msa0534400:CDS | 45.0% | |
| !! | TTTTGCGGTGGATTCCTAGA+TGG | - | chr4_1:9871900-9871919 | Msa0534400:CDS | 45.0% |
| AGAGATTATGAACCGGCAAC+AGG | + | chr4_1:9871955-9871974 | None:intergenic | 45.0% | |
| GTTGGGGGATACTTATGTTC+TGG | - | chr4_1:9871980-9871999 | Msa0534400:CDS | 45.0% | |
| CACATCCAAGGTGGTCAATG+CGG | - | chr4_1:9869589-9869608 | Msa0534400:three_prime_UTR | 50.0% | |
| ! | CCCAGAATTTGGCTCCGATT+TGG | + | chr4_1:9869618-9869637 | None:intergenic | 50.0% |
| TGAATCACCGACGTAACGAC+CGG | + | chr4_1:9869674-9869693 | None:intergenic | 50.0% | |
| ! | GTATGCCATTCACTTGGTGG+AGG | - | chr4_1:9870823-9870842 | Msa0534400:intron | 50.0% |
| CAGTTCCTCCACCAAGTGAA+TGG | + | chr4_1:9870831-9870850 | None:intergenic | 50.0% | |
| ! | CATTCACTTGGTGGAGGAAC+TGG | - | chr4_1:9870829-9870848 | Msa0534400:intron | 50.0% |
| TGGAGGAACTGGATCTGGAA+TGG | - | chr4_1:9870840-9870859 | Msa0534400:intron | 50.0% | |
| ! | GGAGGAACTGGATCTGGAAT+GGG | - | chr4_1:9870841-9870860 | Msa0534400:intron | 50.0% |
| GATCGGAGTTTAGCTGACCA+GGG | + | chr4_1:9871266-9871285 | None:intergenic | 50.0% | |
| AGATCGGAGTTTAGCTGACC+AGG | + | chr4_1:9871267-9871286 | None:intergenic | 50.0% | |
| AAGAAGTGAAGGCGAGGGAA+TGG | + | chr4_1:9871315-9871334 | None:intergenic | 50.0% | |
| CAAGAGGTTCTCAGCAGTAC+AGG | - | chr4_1:9871361-9871380 | Msa0534400:intron | 50.0% | |
| GGCAGCACACATCATGTTCT+TGG | + | chr4_1:9871427-9871446 | None:intergenic | 50.0% | |
| !! | TGAGGTATCGTCCGTGTCTA+GGG | + | chr4_1:9871452-9871471 | None:intergenic | 50.0% |
| TGAAGATGGCTGATGCAGTG+AGG | + | chr4_1:9871470-9871489 | None:intergenic | 50.0% | |
| ACTGCATCAGCCATCTTCAG+AGG | - | chr4_1:9871471-9871490 | Msa0534400:intron | 50.0% | |
| ! | GCTCATCTTGCCTCTGAAGA+TGG | + | chr4_1:9871484-9871503 | None:intergenic | 50.0% |
| CAGAGGCAAGATGAGCACAA+AGG | - | chr4_1:9871488-9871507 | Msa0534400:intron | 50.0% | |
| TCCACCAACAGGGTTGAAGA+TGG | - | chr4_1:9871605-9871624 | Msa0534400:intron | 50.0% | |
| GAAGCCATCTTCAACCCTGT+TGG | + | chr4_1:9871612-9871631 | None:intergenic | 50.0% | |
| GGATGAGATGGAGTTCACTG+AGG | - | chr4_1:9871746-9871765 | Msa0534400:CDS | 50.0% | |
| CTCAAGCCTCATCATGTTCC+TGG | + | chr4_1:9871869-9871888 | None:intergenic | 50.0% | |
| CAGGAACATGATGAGGCTTG+AGG | - | chr4_1:9871867-9871886 | Msa0534400:CDS | 50.0% | |
| ! | GGCTTGTGATCTTTTTGCGG+TGG | - | chr4_1:9871888-9871907 | Msa0534400:CDS | 50.0% |
| ! | GGTTACCGCATTGACCACCT+TGG | + | chr4_1:9869597-9869616 | None:intergenic | 55.0% |
| ! | CGGAGCCAAATTCTGGGAAG+TGG | - | chr4_1:9869621-9869640 | Msa0534400:three_prime_UTR | 55.0% |
| GATCCAACCGGTCGTTACGT+CGG | - | chr4_1:9869664-9869683 | Msa0534400:three_prime_UTR | 55.0% | |
| TGGAAGGTTCGTTCCGAGAG+CGG | - | chr4_1:9869741-9869760 | Msa0534400:exon | 55.0% | |
| CGTTCCGAGAGCGGTTCTTA+TGG | - | chr4_1:9869750-9869769 | Msa0534400:exon | 55.0% | |
| GGATCTTGAACCGGGGACTA+TGG | - | chr4_1:9869771-9869790 | Msa0534400:CDS | 55.0% | |
| ACTATGGACAGTGTCCGGTC+TGG | - | chr4_1:9869787-9869806 | Msa0534400:CDS | 55.0% | |
| GTGTTTGGTCAGAGTGGTGC+TGG | - | chr4_1:9869844-9869863 | Msa0534400:CDS | 55.0% | |
| CTTGGTGGAGGAACTGGATC+TGG | - | chr4_1:9870835-9870854 | Msa0534400:intron | 55.0% | |
| GGGTTGTGAGCTTGAGGGTA+CGG | + | chr4_1:9871059-9871078 | None:intergenic | 55.0% | |
| GCTTGGGGTTGTGAGCTTGA+GGG | + | chr4_1:9871064-9871083 | None:intergenic | 55.0% | |
| AGCTTGGGGTTGTGAGCTTG+AGG | + | chr4_1:9871065-9871084 | None:intergenic | 55.0% | |
| ! | GTATCGTCCGTGTCTAGGGT+CGG | + | chr4_1:9871448-9871467 | None:intergenic | 55.0% |
| !! | GTGAGGTATCGTCCGTGTCT+AGG | + | chr4_1:9871453-9871472 | None:intergenic | 55.0% |
| GCCATCTTCAACCCTGTTGG+TGG | + | chr4_1:9871609-9871628 | None:intergenic | 55.0% | |
| TCAGGATGCTACTGCAGAGG+AGG | - | chr4_1:9871812-9871831 | Msa0534400:CDS | 55.0% | |
| ATGCCGCAACTTCCTGTTGC+CGG | - | chr4_1:9871940-9871959 | Msa0534400:CDS | 55.0% | |
| GAACCGGCAACAGGAAGTTG+CGG | + | chr4_1:9871946-9871965 | None:intergenic | 55.0% | |
| TCACCGACGTAACGACCGGT+TGG | + | chr4_1:9869670-9869689 | None:intergenic | 60.0% | |
| CGGACACTGTCCATAGTCCC+CGG | + | chr4_1:9869784-9869803 | None:intergenic | 60.0% | |
| CGGGGACTATGGACAGTGTC+CGG | - | chr4_1:9869782-9869801 | Msa0534400:CDS | 60.0% | |
| AGTGTCCGGTCTGGACCGTA+CGG | - | chr4_1:9869796-9869815 | Msa0534400:CDS | 60.0% | |
| TCTGACCGTACGGTCCAGAC+CGG | + | chr4_1:9869804-9869823 | None:intergenic | 60.0% | |
| TGTGCTGCCGACCCTAGACA+CGG | - | chr4_1:9871438-9871457 | Msa0534400:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 9869403 | 9872242 | 9869403 | ID=Msa0534400;Name=Msa0534400 |
| chr4_1 | mRNA | 9869403 | 9872242 | 9869403 | ID=Msa0534400-mRNA-1;Parent=Msa0534400;Name=Msa0534400-mRNA-1;_AED=0.25;_eAED=0.25;_QI=171|1|1|1|1|1|3|355|449 |
| chr4_1 | exon | 9869403 | 9870443 | 9869403 | ID=Msa0534400-mRNA-1:exon:3193;Parent=Msa0534400-mRNA-1 |
| chr4_1 | exon | 9870561 | 9870830 | 9870561 | ID=Msa0534400-mRNA-1:exon:3192;Parent=Msa0534400-mRNA-1 |
| chr4_1 | exon | 9871678 | 9872242 | 9871678 | ID=Msa0534400-mRNA-1:exon:3191;Parent=Msa0534400-mRNA-1 |
| chr4_1 | five_prime_UTR | 9872072 | 9872242 | 9872072 | ID=Msa0534400-mRNA-1:five_prime_utr;Parent=Msa0534400-mRNA-1 |
| chr4_1 | CDS | 9871678 | 9872071 | 9871678 | ID=Msa0534400-mRNA-1:cds;Parent=Msa0534400-mRNA-1 |
| chr4_1 | CDS | 9870561 | 9870830 | 9870561 | ID=Msa0534400-mRNA-1:cds;Parent=Msa0534400-mRNA-1 |
| chr4_1 | CDS | 9869758 | 9870443 | 9869758 | ID=Msa0534400-mRNA-1:cds;Parent=Msa0534400-mRNA-1 |
| chr4_1 | three_prime_UTR | 9869403 | 9869757 | 9869403 | ID=Msa0534400-mRNA-1:three_prime_utr;Parent=Msa0534400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
