AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1443180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443180 MtrunA17_Chr8g0377481 98.144 970 18 0 1 970 1 970 0.0 1981
Msa1443180 MtrunA17_Chr3g0122391 80.204 980 183 5 1 970 49 1027 0.0 1609
Msa1443180 MtrunA17_Chr5g0447641 53.838 990 392 15 19 967 247 1212 0.0 1035
Msa1443180 MtrunA17_Chr8g0392301 52.563 995 395 17 25 967 25 994 0.0 975
Msa1443180 MtrunA17_Chr2g0311191 44.118 306 71 4 203 508 29 234 5.35e-65 219
Msa1443180 MtrunA17_Chr3g0136601 36.957 276 163 4 395 661 373 646 3.88e-40 160
Msa1443180 MtrunA17_Chr5g0405701 33.750 320 188 6 345 657 462 764 2.87e-38 155
Msa1443180 MtrunA17_Chr5g0405701 34.722 144 62 2 838 955 1047 1184 8.20e-18 89.4
Msa1443180 MtrunA17_Chr1g0150511 33.882 304 163 6 395 661 379 681 3.69e-38 154
Msa1443180 MtrunA17_Chr1g0150511 33.333 129 67 3 843 953 870 997 4.06e-12 70.5
Msa1443180 MtrunA17_Chr8g0371601 34.603 315 192 5 345 657 424 726 9.82e-37 150
Msa1443180 MtrunA17_Chr8g0371601 36.296 135 63 3 838 955 1026 1154 7.52e-18 89.4
Msa1443180 MtrunA17_Chr4g0013831 28.650 363 222 6 383 742 335 663 1.40e-34 142
Msa1443180 MtrunA17_Chr4g0013831 32.624 141 78 5 820 959 600 724 6.47e-12 69.7
Msa1443180 MtrunA17_Chr7g0269631 30.357 280 162 4 383 661 335 582 3.62e-28 121
Msa1443180 MtrunA17_Chr1g0194741 30.249 281 164 8 381 642 384 651 2.04e-25 112
Msa1443180 MtrunA17_Chr1g0197591 26.000 350 208 10 344 666 328 653 2.11e-24 110
Msa1443180 MtrunA17_Chr1g0197591 37.692 130 64 4 841 963 926 1045 2.13e-15 81.3
Msa1443180 MtrunA17_Chr7g0274831 33.562 146 84 4 826 970 628 761 1.69e-17 87.8
Msa1443180 MtrunA17_Chr7g0274831 21.542 441 290 11 371 804 354 745 1.48e-14 78.2
Msa1443180 MtrunA17_Chr1g0190021 33.835 133 78 3 840 970 634 758 9.99e-16 82.0
Msa1443180 MtrunA17_Chr1g0190021 25.595 168 125 0 371 538 350 517 2.89e-12 70.9
Msa1443180 MtrunA17_Chr1g0186431 32.331 133 81 3 837 968 631 755 7.40e-15 79.3
Msa1443180 MtrunA17_Chr1g0186431 26.174 149 110 0 371 519 344 492 6.16e-11 66.6
Msa1443180 MtrunA17_Chr1g0194731 32.609 138 69 6 838 964 325 449 1.33e-13 74.3
Msa1443180 MtrunA17_Chr1g0168161 31.579 133 81 3 837 967 633 757 1.99e-13 74.7
Msa1443180 MtrunA17_Chr8g0343551 41.463 82 36 3 882 963 13 82 1.48e-12 64.3
Msa1443180 MtrunA17_Chr8g0364781 32.759 116 70 3 844 959 15 122 4.95e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443180 AT1G27320.1 68.330 982 286 7 1 969 61 1030 0.0 1344
Msa1443180 AT5G35750.1 56.830 959 374 10 34 967 230 1173 0.0 1066
Msa1443180 AT2G01830.5 53.086 972 397 14 31 967 113 1060 0.0 989
Msa1443180 AT2G01830.1 53.086 972 397 14 31 967 101 1048 0.0 988
Msa1443180 AT2G01830.4 53.086 972 397 14 31 967 101 1048 0.0 988
Msa1443180 AT2G01830.2 53.086 972 397 14 31 967 124 1071 0.0 988
Msa1443180 AT2G01830.6 53.086 972 397 14 31 967 101 1048 0.0 988
Msa1443180 AT2G01830.3 53.086 972 397 14 31 967 101 1048 0.0 988
Msa1443180 AT5G10720.1 35.252 278 145 3 395 668 369 615 7.12e-42 166
Msa1443180 AT5G10720.1 32.414 145 78 3 842 968 779 921 9.62e-14 76.3
Msa1443180 AT1G66340.1 29.108 426 255 8 383 804 334 716 2.45e-38 154
Msa1443180 AT1G66340.1 29.167 120 78 2 840 959 609 721 4.12e-11 67.4
Msa1443180 AT2G17820.1 30.233 387 244 8 345 728 451 814 1.45e-36 150
Msa1443180 AT2G17820.1 33.333 150 62 3 838 955 1041 1184 3.60e-15 81.3
Msa1443180 AT2G40940.1 32.143 280 157 4 383 661 334 581 9.24e-31 129
Msa1443180 AT2G47430.1 31.126 302 179 8 380 666 383 670 5.50e-29 125
Msa1443180 AT2G47430.1 37.594 133 59 5 836 952 981 1105 9.02e-14 76.6
Msa1443180 AT3G04580.2 34.286 140 81 3 828 965 629 759 1.85e-15 81.6
Msa1443180 AT3G04580.2 21.711 456 292 14 379 817 354 761 1.30e-12 72.4
Msa1443180 AT3G04580.1 34.286 140 81 3 828 965 629 759 1.85e-15 81.6
Msa1443180 AT3G04580.1 21.711 456 292 14 379 817 354 761 1.30e-12 72.4
Msa1443180 AT3G23150.1 35.252 139 74 3 837 970 642 769 6.63e-15 79.7

Find 197 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAACTTTGGTGACCCTTTC+AGG 0.130440 tig0030384:+2360 Msa1443180:CDS
ATTGCATACCCATCCATTTC+TGG 0.150261 tig0030384:-4864 None:intergenic
AACTGCATTCCCTTTGTTTA+TGG 0.188548 tig0030384:-4373 None:intergenic
ATTTCTGTTGATATGCTTTC+TGG 0.198728 tig0030384:+1009 Msa1443180:CDS
GATCAGGCAAAGATTGAATT+TGG 0.209090 tig0030384:+3024 Msa1443180:CDS
TTCTTAAAAGTGCCGGAATT+TGG 0.238320 tig0030384:+5879 Msa1443180:three_prime_UTR
GTCACTTATAAATGAGGTTT+TGG 0.260867 tig0030384:+3002 Msa1443180:CDS
ATTCTAATTGTTGATGATAA+TGG 0.264746 tig0030384:+4705 Msa1443180:CDS
TAAAATGATTTGAGTCAAAA+AGG 0.265333 tig0030384:-5535 None:intergenic
AGGGATGATGCATATGCTTA+TGG 0.272594 tig0030384:+2912 Msa1443180:intron
GGCCTCATGAATGGCGAAAT+TGG 0.276640 tig0030384:+4099 Msa1443180:CDS
GTTACTTATAGGTATGTATT+AGG 0.278145 tig0030384:+5742 Msa1443180:three_prime_UTR
CTACTGATTGGCCAAATAAA+TGG 0.280511 tig0030384:-5974 None:intergenic
GGAACAAGAGAACTCTAAAT+AGG 0.280932 tig0030384:+4637 Msa1443180:CDS
GAAAAGAAACAGAAAAGTTT+TGG 0.287824 tig0030384:+5439 Msa1443180:exon
TCTCATGGGCAACTCAATTA+AGG 0.288486 tig0030384:+3324 Msa1443180:CDS
CTTGTTATTGCTCTCCTTGT+TGG 0.291084 tig0030384:+2547 Msa1443180:CDS
ATGTATGGCTCAAATATATC+AGG 0.301140 tig0030384:+2311 Msa1443180:CDS
GGATCACCTATTAGCAGTTT+AGG 0.310227 tig0030384:-3274 None:intergenic
GGTATGTAATAGTTACTTAT+AGG 0.312340 tig0030384:+5731 Msa1443180:three_prime_UTR
TCTCTTAGCCATCTTCTTGT+TGG 0.315553 tig0030384:+4675 Msa1443180:CDS
CTCTTAGCCATCTTCTTGTT+GGG 0.318317 tig0030384:+4676 Msa1443180:CDS
CGATTATGCTGTAGAGGAAT+TGG 0.327475 tig0030384:+921 Msa1443180:CDS
TCAGTTCGACGCATGTTTCA+TGG 0.329522 tig0030384:+4830 Msa1443180:CDS
GTTGCTTGAATCCTTTCATT+TGG 0.333595 tig0030384:-1502 None:intergenic
TCATCGGTGTTCTGATTTCA+TGG 0.354261 tig0030384:-2778 None:intergenic
ATTGGAGCCATCCCCTCTTC+AGG 0.361853 tig0030384:+939 Msa1443180:CDS
GGTTGATTGAAGTGAAATAA+AGG 0.362623 tig0030384:+5763 Msa1443180:three_prime_UTR
GGATATTCAAATGCCAGAAA+TGG 0.363538 tig0030384:+4851 Msa1443180:CDS
AATAAAGGAAAGTAGGTTCT+TGG 0.363674 tig0030384:+5778 Msa1443180:three_prime_UTR
CCTGAGTTGGAAAGGATTCA+AGG 0.368177 tig0030384:+3870 Msa1443180:CDS
GCATAATCGTTCTTATGAAC+TGG 0.371534 tig0030384:-907 None:intergenic
CAAGTTCCTAAACTGCTAAT+AGG 0.375479 tig0030384:+3268 Msa1443180:CDS
GAAAGGATTCAAGCAACTAA+TGG 0.381749 tig0030384:+1508 Msa1443180:CDS
AACTTTATCGGGAAGTTTCT+CGG 0.392394 tig0030384:+5400 Msa1443180:CDS
ACTTTACATGGAAGAATCAA+TGG 0.396819 tig0030384:-5664 None:intergenic
ACACAGAAGTATCTATAAAC+TGG 0.396943 tig0030384:+5271 Msa1443180:CDS
TCATTTGGAGTTGCATTTGA+TGG 0.397149 tig0030384:-1487 None:intergenic
ATTATTTGCCGAAACCTTCC+AGG 0.397385 tig0030384:-3295 None:intergenic
TTTGAGCCATACATGGCAAT+TGG 0.398441 tig0030384:-2302 None:intergenic
GTGTTGCGTGCAAGAGAATC+AGG 0.399039 tig0030384:+1376 Msa1443180:CDS
TTGAAGCCGAACAACTTTAT+CGG 0.400783 tig0030384:+5388 Msa1443180:CDS
GGAAACATGAGATGCATTGC+AGG 0.401426 tig0030384:+2381 Msa1443180:CDS
GATGACTGCAGATGTAATTC+AGG 0.412226 tig0030384:+5311 Msa1443180:CDS
AATATTTGAAAGCCAAATTC+CGG 0.412259 tig0030384:-5891 None:intergenic
TCTTGATTGAGCAGGAAGTT+TGG 0.412734 tig0030384:+4406 Msa1443180:CDS
GCTGCAATATTAACTTCAAT+TGG 0.416348 tig0030384:+2520 Msa1443180:CDS
GAACAAGAGAACTCTAAATA+GGG 0.416973 tig0030384:+4638 Msa1443180:CDS
TGTTTATGGTTGACACCCCT+TGG 0.417467 tig0030384:-4359 None:intergenic
CTATCTCATCGTCTCACAAA+AGG 0.420162 tig0030384:+5483 Msa1443180:three_prime_UTR
TATGCCACACCACTTGTTAG+AGG 0.422210 tig0030384:-796 None:intergenic
ATTGTATCTGTTGAAGATAC+AGG 0.422648 tig0030384:+3955 Msa1443180:CDS
ACTAAGCATTAGCAAGTGTT+TGG 0.428271 tig0030384:+4074 Msa1443180:CDS
TTAACAAGAATGAACAACTT+TGG 0.432009 tig0030384:-4495 None:intergenic
AAAGGATTCAAGCAACTAAT+GGG 0.437942 tig0030384:+1509 Msa1443180:CDS
ATTTGATGTTGAGTCATTAG+TGG 0.439863 tig0030384:+2205 Msa1443180:CDS
TCCCGAAAACATGGAGGAAC+TGG 0.442693 tig0030384:+4045 Msa1443180:CDS
GCAAATAATTACTAATCTCA+TGG 0.446857 tig0030384:+3309 Msa1443180:CDS
TCTGATAAGTCCCAAGGAAA+AGG 0.449413 tig0030384:+3114 Msa1443180:CDS
ATATTGCTAAACAGGTATCT+TGG 0.449675 tig0030384:+2176 Msa1443180:intron
TGATAGGGAGTGTGCATAGT+AGG 0.450644 tig0030384:+5606 Msa1443180:three_prime_UTR
AAACATGGAGGAACTGGTAT+TGG 0.453248 tig0030384:+4051 Msa1443180:CDS
TTTACTGCTGTCTTCGCCAA+TGG 0.460268 tig0030384:+4159 Msa1443180:CDS
AACTTCCCGATAAAGTTGTT+CGG 0.460960 tig0030384:-5394 None:intergenic
CATGTCAGCACTCTTAACTT+TGG 0.464215 tig0030384:+2347 Msa1443180:CDS
TCTGCAGTCATCGCTAAAAT+CGG 0.464289 tig0030384:-5300 None:intergenic
GGAGATTGTTCATTCTATAG+AGG 0.466518 tig0030384:+3789 Msa1443180:CDS
GCATCTCATGTTTCCTGAAA+GGG 0.466982 tig0030384:-2373 None:intergenic
AGATTTAGATGTAACTCAAC+AGG 0.467158 tig0030384:+2939 Msa1443180:CDS
CATCGGTGTTCTGATTTCAT+GGG 0.467349 tig0030384:-2777 None:intergenic
TGAAGCCGAACAACTTTATC+GGG 0.468450 tig0030384:+5389 Msa1443180:CDS
ACTCATCCAATTGCCATGTA+TGG 0.469930 tig0030384:+2296 Msa1443180:CDS
AGGTTGGATTATTAAGAGAA+TGG 0.472979 tig0030384:+867 Msa1443180:CDS
TAAAGTTGTTCGGCTTCAAA+TGG 0.473516 tig0030384:-5384 None:intergenic
CATGTAAAGTTGTGTAGTCT+AGG 0.478649 tig0030384:+5710 Msa1443180:three_prime_UTR
TCTTGTAGACGGCAAATGTA+AGG 0.478724 tig0030384:-1456 None:intergenic
GACAGCAGTAAAAGTAAAAG+TGG 0.479310 tig0030384:-4148 None:intergenic
CTTTACATGGAAGAATCAAT+GGG 0.480380 tig0030384:-5663 None:intergenic
CCTTGGCATTCACGTTGAAA+CGG 0.483428 tig0030384:+4323 Msa1443180:CDS
TATAATATATACATGGTTGA+TGG 0.485646 tig0030384:-5812 None:intergenic
TAAGAGTGCTTCATTATGAA+AGG 0.486345 tig0030384:+824 Msa1443180:CDS
GACGAACCTACTTGCATGAA+TGG 0.486640 tig0030384:-4018 None:intergenic
ACCTGCATATTCAGAATTTG+AGG 0.486963 tig0030384:+4233 Msa1443180:CDS
CCCTCAAATTCTGAATATGC+AGG 0.488168 tig0030384:-4234 None:intergenic
TCTAGTGTCACTTATAAATG+AGG 0.488685 tig0030384:+2996 Msa1443180:CDS
CCTTGAATCCTTTCCAACTC+AGG 0.489334 tig0030384:-3870 None:intergenic
CTTCTCAAATCAAATCGGTT+AGG 0.491529 tig0030384:+1427 Msa1443180:CDS
AAACTGCTAATAGGTGATCC+TGG 0.491656 tig0030384:+3277 Msa1443180:CDS
TCAGGCTTCTCAAATCAAAT+CGG 0.494173 tig0030384:+1422 Msa1443180:CDS
TGTTGATATGCTTTCTGGAA+AGG 0.498415 tig0030384:+1014 Msa1443180:CDS
AGCATTAGCAAGTGTTTGGT+TGG 0.499734 tig0030384:+4078 Msa1443180:CDS
GAAGTGAAATAAAGGAAAGT+AGG 0.500007 tig0030384:+5771 Msa1443180:three_prime_UTR
TTCAAGGCTTTCAGTCAAGA+TGG 0.501177 tig0030384:+3886 Msa1443180:CDS
CCTTGTGTTCTTAAAAGTGC+CGG 0.502001 tig0030384:+5872 Msa1443180:three_prime_UTR
TTCAGTCAAGATGGACCACT+TGG 0.502714 tig0030384:+3895 Msa1443180:CDS
TGCTAAACAGGTATCTTGGT+GGG 0.506352 tig0030384:+2180 Msa1443180:intron
TACAGCGAGAGATGAATGTT+AGG 0.506665 tig0030384:+4616 Msa1443180:CDS
TCGTCGATCTCCCGAAAACA+TGG 0.509308 tig0030384:+4036 Msa1443180:CDS
AAAGGGAGGAAATATTGAAC+TGG 0.511995 tig0030384:+5501 Msa1443180:three_prime_UTR
TGTTTGGTTGGCCTCATGAA+TGG 0.512361 tig0030384:+4090 Msa1443180:CDS
TGCTGTTTATGAAAGATCCC+TGG 0.513895 tig0030384:+5565 Msa1443180:three_prime_UTR
TGCCTAAGGTGTGGAATGGA+TGG 0.514612 tig0030384:+5348 Msa1443180:CDS
GTTCTAATGAGTGTAAAATA+CGG 0.515138 tig0030384:+4190 Msa1443180:CDS
TATCTCATCGTCTCACAAAA+GGG 0.516880 tig0030384:+5484 Msa1443180:three_prime_UTR
ACTGAGAGACTGACTTTACA+TGG 0.518038 tig0030384:-5676 None:intergenic
ATTTGAGGGTATGAATGCAT+TGG 0.519831 tig0030384:+4248 Msa1443180:CDS
CAACGTGAATGCCAAGGCGT+TGG 0.521697 tig0030384:-4317 None:intergenic
CAACATGGTCTTGATTGAGC+AGG 0.522436 tig0030384:+4398 Msa1443180:CDS
AATCCAGAAAATACATTGAG+TGG 0.523791 tig0030384:+3826 Msa1443180:CDS
TGCATCTCATGTTTCCTGAA+AGG 0.524248 tig0030384:-2374 None:intergenic
GTGCAAGAGAATCAGGCAAA+GGG 0.525841 tig0030384:+1383 Msa1443180:CDS
CGGTTTCAGATTTGAACCAA+GGG 0.529721 tig0030384:+4343 Msa1443180:CDS
TAGGTGATCCTGGAAGGTTT+CGG 0.530999 tig0030384:+3287 Msa1443180:CDS
GAAATCAGAACACCGATGAA+TGG 0.536195 tig0030384:+2782 Msa1443180:CDS
TGATATATTTGAGCCATACA+TGG 0.537691 tig0030384:-2309 None:intergenic
ATTCAAATGCCAGAAATGGA+TGG 0.537787 tig0030384:+4855 Msa1443180:CDS
GTGAATCGTGCAGTAGCAGC+TGG 0.538402 tig0030384:+4729 Msa1443180:CDS
GTCAGAACAGCACAGGAAAG+TGG 0.540070 tig0030384:+2967 Msa1443180:CDS
CAAATAATTACTAATCTCAT+GGG 0.541408 tig0030384:+3310 Msa1443180:CDS
TTGTGAAAAGTTGCCTGAGT+TGG 0.542609 tig0030384:+3857 Msa1443180:CDS
GAACAATCTCCTCAACAAGA+TGG 0.546858 tig0030384:-3777 None:intergenic
AGATGATTACCATGAAATGA+TGG 0.547933 tig0030384:+2612 Msa1443180:CDS
CCTGCATATTCAGAATTTGA+GGG 0.551039 tig0030384:+4234 Msa1443180:CDS
TATAGTATAATTTATCTATG+TGG 0.552181 tig0030384:-5930 None:intergenic
TGTGACTATCCATCTTGTTG+AGG 0.552354 tig0030384:+3768 Msa1443180:CDS
AATTTGAGAAGCAACAAGGT+TGG 0.555193 tig0030384:+851 Msa1443180:CDS
GTATCTTGTGCAAATATGAC+AGG 0.555330 tig0030384:-973 None:intergenic
CAATATCACATCCAACGCCT+TGG 0.556712 tig0030384:+4306 Msa1443180:CDS
ATTGATGAGATCACTAGAGA+TGG 0.556798 tig0030384:-3929 None:intergenic
AGTAGGATCCAAGTTGTAGT+TGG 0.559658 tig0030384:+5623 Msa1443180:three_prime_UTR
GCAAGCATGCTTGCCCTGAG+TGG 0.560278 tig0030384:-4585 None:intergenic
AAGAGTGCTTCATTATGAAA+GGG 0.560545 tig0030384:+825 Msa1443180:CDS
ATTTGATTTGAGAAGCCTGA+AGG 0.561335 tig0030384:-1419 None:intergenic
TGCTAATAGGTGATCCTGGA+AGG 0.562191 tig0030384:+3281 Msa1443180:CDS
CAAATGCAACTCCAAATGAA+AGG 0.563584 tig0030384:+1491 Msa1443180:CDS
TTCAAATGCCAGAAATGGAT+GGG 0.564303 tig0030384:+4856 Msa1443180:CDS
GGGTGTCAACCATAAACAAA+GGG 0.565304 tig0030384:+4364 Msa1443180:CDS
AGCAGATGTTGCAAAATCCC+AGG 0.568472 tig0030384:+2657 Msa1443180:CDS
ACAAGAATGAACAACTTTGG+AGG 0.570727 tig0030384:-4492 None:intergenic
TATTCTTCCTGAAGAGGGGA+TGG 0.575235 tig0030384:-946 None:intergenic
TTAGCCATCTTCTTGTTGGG+AGG 0.575871 tig0030384:+4679 Msa1443180:CDS
GAGCATATTCTTCCTGAAGA+GGG 0.577257 tig0030384:-951 None:intergenic
ATGAGAGGTTGAGATTCTCT+AGG 0.586217 tig0030384:-3988 None:intergenic
ATCCAATTTCGCCATTCATG+AGG 0.589404 tig0030384:-4101 None:intergenic
TGTATGGCTCAAATATATCA+GGG 0.591616 tig0030384:+2312 Msa1443180:CDS
TTGCTAAACAGGTATCTTGG+TGG 0.592307 tig0030384:+2179 Msa1443180:intron
GGAGCATATTCTTCCTGAAG+AGG 0.594545 tig0030384:-952 None:intergenic
TTTGATTTGAGAAGCCTGAA+GGG 0.594834 tig0030384:-1418 None:intergenic
ATTAGAACTGAGGAGTCCAT+TGG 0.595386 tig0030384:-4175 None:intergenic
CTATCATCACAAAACCACTC+AGG 0.595668 tig0030384:+4571 Msa1443180:CDS
AATATTGCAGCACATGGCAA+AGG 0.595803 tig0030384:-2508 None:intergenic
TGAGTCATATAATATATACA+TGG 0.596965 tig0030384:-5819 None:intergenic
TAAGAACGATTATGCTGTAG+AGG 0.600889 tig0030384:+915 Msa1443180:CDS
ACGGTTTCAGATTTGAACCA+AGG 0.601766 tig0030384:+4342 Msa1443180:CDS
CGTGCAAGAGAATCAGGCAA+AGG 0.602570 tig0030384:+1382 Msa1443180:CDS
TCACCTAAAACACCATTCAT+CGG 0.602655 tig0030384:-2794 None:intergenic
AAGTAGGTTCTTGGAAACAA+AGG 0.608113 tig0030384:+5787 Msa1443180:three_prime_UTR
AAAAGTTGCCTGAGTTGGAA+AGG 0.608555 tig0030384:+3862 Msa1443180:CDS
TACAGGTAGAATCAGAGAGA+TGG 0.608677 tig0030384:+5236 Msa1443180:CDS
TTCACTCCATTCATGCAAGT+AGG 0.609373 tig0030384:+4012 Msa1443180:CDS
ATTTGGTAAGCTAGAGCTTG+AGG 0.609575 tig0030384:+3041 Msa1443180:CDS
GGAATATGTCAGAACAGCAC+AGG 0.609824 tig0030384:+2960 Msa1443180:CDS
CATGAGAAATGCCTAAGGTG+TGG 0.612289 tig0030384:+5339 Msa1443180:CDS
ACTATAGTATAGTGTAAGAG+TGG 0.612413 tig0030384:+5947 Msa1443180:three_prime_UTR
TATCATCACAAAACCACTCA+GGG 0.614790 tig0030384:+4572 Msa1443180:CDS
ATTGCAGCACATGGCAAAGG+CGG 0.615431 tig0030384:-2505 None:intergenic
GGGGTGTCAACCATAAACAA+AGG 0.619294 tig0030384:+4363 Msa1443180:CDS
CATAGAAAATATGTCCAACA+AGG 0.621926 tig0030384:-2561 None:intergenic
TTTGAGAGGCCTCTAACAAG+TGG 0.622010 tig0030384:+787 Msa1443180:CDS
GCTAAACAGGTATCTTGGTG+GGG 0.627851 tig0030384:+2181 Msa1443180:intron
CATGCGTCGAACTGATGAGG+TGG 0.627952 tig0030384:-4822 None:intergenic
CCGTTTCAACGTGAATGCCA+AGG 0.630331 tig0030384:-4323 None:intergenic
TGGAAGATATCTCTTGTAGA+CGG 0.637440 tig0030384:-1467 None:intergenic
GAAATGCCTAAGGTGTGGAA+TGG 0.638335 tig0030384:+5344 Msa1443180:CDS
CTACACATGAGAAATGCCTA+AGG 0.639949 tig0030384:+5334 Msa1443180:CDS
GAACAATTTGAGAAGCAACA+AGG 0.640709 tig0030384:+847 Msa1443180:CDS
AGCATATTCTTCCTGAAGAG+GGG 0.643515 tig0030384:-950 None:intergenic
GAAGTTAATATTGCAGCACA+TGG 0.648248 tig0030384:-2514 None:intergenic
GTCCCAAGGAAAAGGAGTCG+AGG 0.651906 tig0030384:+3122 Msa1443180:CDS
TCTGTTGAAGATACAGGTGA+CGG 0.654876 tig0030384:+3961 Msa1443180:CDS
CTCATCGTCTCACAAAAGGG+AGG 0.657380 tig0030384:+5487 Msa1443180:three_prime_UTR
GCCTAAGGTGTGGAATGGAT+GGG 0.659789 tig0030384:+5349 Msa1443180:CDS
TCTGATTTCATGGGAAACAG+TGG 0.660492 tig0030384:-2768 None:intergenic
GATGTGGTTTGTGTTAGCAG+TGG 0.662109 tig0030384:+4774 Msa1443180:CDS
ACCCATCCATTCCACACCTT+AGG 0.666090 tig0030384:-5350 None:intergenic
TTGCACGCAACACATTATCA+CGG 0.668088 tig0030384:-1366 None:intergenic
AGCACAAGGAAAATCAGCCA+CGG 0.673243 tig0030384:+4465 Msa1443180:CDS
AAACATGCGTCGAACTGATG+AGG 0.675854 tig0030384:-4825 None:intergenic
GAGGCCTCTAACAAGTGGTG+TGG 0.676496 tig0030384:+792 Msa1443180:CDS
TGCAAGAGAATCAGGCAAAG+GGG 0.689158 tig0030384:+1384 Msa1443180:CDS
TCGATCTCCCGAAAACATGG+AGG 0.692524 tig0030384:+4039 Msa1443180:CDS
GTATGGCTCAAATATATCAG+GGG 0.693592 tig0030384:+2313 Msa1443180:CDS
GGTTTCAGATTTGAACCAAG+GGG 0.702437 tig0030384:+4344 Msa1443180:CDS
AGGGAATGCAGTTATCAACA+TGG 0.702500 tig0030384:+4383 Msa1443180:CDS
ATGGAAGAGAAAGAACCAAG+TGG 0.711725 tig0030384:-3910 None:intergenic
ATGAATGGAGTGAAGATGAG+AGG 0.715966 tig0030384:-4003 None:intergenic
ACAACTTTGGAGGAAAACCG+TGG 0.762101 tig0030384:-4482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTATTTTATATTTTGTAA+TGG - tig0030384:3461-3480 None:intergenic 10.0%
!! TAAAATCTTAATTGTTTGAT+TGG + tig0030384:702-721 Msa1443180:intron 15.0%
!! AAAATCTTAATTGTTTGATT+GGG + tig0030384:703-722 Msa1443180:intron 15.0%
!!! GTTTCTTGTTAAATTTTTTA+AGG + tig0030384:1053-1072 Msa1443180:intron 15.0%
!! TTATCTATTGTTATAGAAAT+AGG + tig0030384:1904-1923 Msa1443180:intron 15.0%
!!! AACTATAAATCATCAAATTT+TGG - tig0030384:4907-4926 None:intergenic 15.0%
!!! AAATTTGATGATTTATAGTT+TGG + tig0030384:4907-4926 Msa1443180:intron 15.0%
!! TACTTAACAGTTTATATAAA+AGG + tig0030384:5018-5037 Msa1443180:intron 15.0%
!!! ATTGATAATTACATAAATTG+TGG - tig0030384:5146-5165 None:intergenic 15.0%
!! TATAGTATAATTTATCTATG+TGG - tig0030384:5933-5952 None:intergenic 15.0%
!!! TCAATAGTTCATGTAATTTT+TGG + tig0030384:2096-2115 Msa1443180:intron 20.0%
!! GCAATATACAAGAAATTAAA+AGG - tig0030384:2163-2182 None:intergenic 20.0%
!! CAAACAATTAAATCATGAAA+AGG - tig0030384:3217-3236 None:intergenic 20.0%
!!! CTTTTCATGATTTAATTGTT+TGG + tig0030384:3215-3234 Msa1443180:intron 20.0%
!! CAAATAATTACTAATCTCAT+GGG + tig0030384:3310-3329 Msa1443180:CDS 20.0%
!!! ATTCTAATTGTTGATGATAA+TGG + tig0030384:4705-4724 Msa1443180:CDS 20.0%
!! AAATTTCCACATAAAAAATG+TGG + tig0030384:4941-4960 Msa1443180:intron 20.0%
!! TAAAATGATTTGAGTCAAAA+AGG - tig0030384:5538-5557 None:intergenic 20.0%
!! AAAAACAATATTCTAAACCA+GGG - tig0030384:5585-5604 None:intergenic 20.0%
!!! TAGAATATTGTTTTTGTGAT+AGG + tig0030384:5590-5609 Msa1443180:three_prime_UTR 20.0%
!!! AGAATATTGTTTTTGTGATA+GGG + tig0030384:5591-5610 Msa1443180:three_prime_UTR 20.0%
!! TATAATATATACATGGTTGA+TGG - tig0030384:5815-5834 None:intergenic 20.0%
!! TGAGTCATATAATATATACA+TGG - tig0030384:5822-5841 None:intergenic 20.0%
!!! CACAACATTTTTTAGTGATT+AGG + tig0030384:57-76 Msa1443180:five_prime_UTR 25.0%
! TGTTGTAAGTATTCATTAAG+TGG + tig0030384:80-99 Msa1443180:five_prime_UTR 25.0%
! AAATAGACATAGCTTGAATA+TGG - tig0030384:385-404 None:intergenic 25.0%
! TAGAACAATCTTTGATCAAA+GGG - tig0030384:496-515 None:intergenic 25.0%
! CTATGGTTTAAATATCCATT+AGG - tig0030384:1106-1125 None:intergenic 25.0%
! CAGATGATTTATCTATTCTA+TGG - tig0030384:1123-1142 None:intergenic 25.0%
! ATGAACAAAGAACAAACTAA+TGG - tig0030384:1571-1590 None:intergenic 25.0%
! CTTACATTATGGTATAGTTT+GGG - tig0030384:1998-2017 None:intergenic 25.0%
! TCTTACATTATGGTATAGTT+TGG - tig0030384:1999-2018 None:intergenic 25.0%
! TTTCTTGTATATTGCTAAAC+AGG + tig0030384:2168-2187 Msa1443180:intron 25.0%
! CAAGAAACTGCAATTATAAT+TGG - tig0030384:2748-2767 None:intergenic 25.0%
!! TGTCTGATTTTCAACTATTT+AGG + tig0030384:2847-2866 Msa1443180:intron 25.0%
! TAGAACAAAGTTATGGTTTA+GGG - tig0030384:2880-2899 None:intergenic 25.0%
! ATAGAACAAAGTTATGGTTT+AGG - tig0030384:2881-2900 None:intergenic 25.0%
! TGCATTATAGAACAAAGTTA+TGG - tig0030384:2887-2906 None:intergenic 25.0%
!! TTGTTCTATAATGCATTTTC+AGG + tig0030384:2892-2911 Msa1443180:intron 25.0%
!! TGTTCTATAATGCATTTTCA+GGG + tig0030384:2893-2912 Msa1443180:intron 25.0%
! AAAATTTCACGATGATCAAA+GGG - tig0030384:3164-3183 None:intergenic 25.0%
! GCAAATAATTACTAATCTCA+TGG + tig0030384:3309-3328 Msa1443180:CDS 25.0%
! GTTCTAATGAGTGTAAAATA+CGG + tig0030384:4190-4209 Msa1443180:CDS 25.0%
! TTAACAAGAATGAACAACTT+TGG - tig0030384:4498-4517 None:intergenic 25.0%
!! GAAAAGAAACAGAAAAGTTT+TGG + tig0030384:5439-5458 Msa1443180:exon 25.0%
! CAAAAACAATATTCTAAACC+AGG - tig0030384:5586-5605 None:intergenic 25.0%
! GGTATGTAATAGTTACTTAT+AGG + tig0030384:5731-5750 Msa1443180:three_prime_UTR 25.0%
! GTTACTTATAGGTATGTATT+AGG + tig0030384:5742-5761 Msa1443180:three_prime_UTR 25.0%
! AATATTTGAAAGCCAAATTC+CGG - tig0030384:5894-5913 None:intergenic 25.0%
ACCAGTTAGTAGTAGAAAAT+TGG + tig0030384:11-30 Msa1443180:five_prime_UTR 30.0%
! ACCAATTTTCTACTACTAAC+TGG - tig0030384:15-34 None:intergenic 30.0%
AACAGTACTGTCAGTATATT+GGG + tig0030384:171-190 Msa1443180:CDS 30.0%
GAAAATAAGTACCTGATCAA+TGG - tig0030384:444-463 None:intergenic 30.0%
CTAGAACAATCTTTGATCAA+AGG - tig0030384:497-516 None:intergenic 30.0%
CTTTGATCAAAGATTGTTCT+AGG + tig0030384:495-514 Msa1443180:intron 30.0%
!! TAAGAGTGCTTCATTATGAA+AGG + tig0030384:824-843 Msa1443180:CDS 30.0%
!! AAGAGTGCTTCATTATGAAA+GGG + tig0030384:825-844 Msa1443180:CDS 30.0%
AGGTTGGATTATTAAGAGAA+TGG + tig0030384:867-886 Msa1443180:CDS 30.0%
ATTTCTGTTGATATGCTTTC+TGG + tig0030384:1009-1028 Msa1443180:CDS 30.0%
TACAATAGACTTAAATGTCC+TGG + tig0030384:1154-1173 Msa1443180:intron 30.0%
ATATTCACTTGTTCATCAAC+AGG + tig0030384:1339-1358 Msa1443180:intron 30.0%
AAAGGATTCAAGCAACTAAT+GGG + tig0030384:1509-1528 Msa1443180:CDS 30.0%
! TTTTTCCCATCAAATGTGAA+TGG - tig0030384:1667-1686 None:intergenic 30.0%
ACGAACAGTTGAACATAATT+AGG + tig0030384:1690-1709 Msa1443180:intron 30.0%
!!! CTATTTTTTATAAGCTGTCC+TGG - tig0030384:1850-1869 None:intergenic 30.0%
TGTTCACTCTTCTTACATTA+TGG - tig0030384:2009-2028 None:intergenic 30.0%
GAACTATTGAATTTCAGAGT+AGG - tig0030384:2086-2105 None:intergenic 30.0%
ATATTGCTAAACAGGTATCT+TGG + tig0030384:2176-2195 Msa1443180:intron 30.0%
ATTTGATGTTGAGTCATTAG+TGG + tig0030384:2205-2224 Msa1443180:CDS 30.0%
TGATATATTTGAGCCATACA+TGG - tig0030384:2312-2331 None:intergenic 30.0%
ATGTATGGCTCAAATATATC+AGG + tig0030384:2311-2330 Msa1443180:CDS 30.0%
TGTATGGCTCAAATATATCA+GGG + tig0030384:2312-2331 Msa1443180:CDS 30.0%
AACTATGCTGAACATTAAGA+AGG - tig0030384:2432-2451 None:intergenic 30.0%
GCTGCAATATTAACTTCAAT+TGG + tig0030384:2520-2539 Msa1443180:CDS 30.0%
CATAGAAAATATGTCCAACA+AGG - tig0030384:2564-2583 None:intergenic 30.0%
! TACTTTTGCAATTCGATTCA+CGG - tig0030384:2590-2609 None:intergenic 30.0%
AGATGATTACCATGAAATGA+TGG + tig0030384:2612-2631 Msa1443180:CDS 30.0%
! TTTTAAGCTCCATCATTTCA+TGG - tig0030384:2624-2643 None:intergenic 30.0%
AGATTTAGATGTAACTCAAC+AGG + tig0030384:2939-2958 Msa1443180:CDS 30.0%
!! TCTAGTGTCACTTATAAATG+AGG + tig0030384:2996-3015 Msa1443180:CDS 30.0%
! GTCACTTATAAATGAGGTTT+TGG + tig0030384:3002-3021 Msa1443180:CDS 30.0%
!!! TATAAATGAGGTTTTGGATC+AGG + tig0030384:3008-3027 Msa1443180:CDS 30.0%
! TTTTGACATACGTTCGATTT+TGG + tig0030384:3071-3090 Msa1443180:CDS 30.0%
GAAAATTTCACGATGATCAA+AGG - tig0030384:3165-3184 None:intergenic 30.0%
AGTGACATGCATGATTAATA+AGG - tig0030384:3356-3375 None:intergenic 30.0%
! ATTAATCATGCATGTCACTT+AGG + tig0030384:3357-3376 Msa1443180:intron 30.0%
TACATAAGCACTTACATGAT+AGG - tig0030384:3428-3447 None:intergenic 30.0%
TGTGAACTGCAAAACAATTA+CGG - tig0030384:3731-3750 None:intergenic 30.0%
AATCCAGAAAATACATTGAG+TGG + tig0030384:3826-3845 Msa1443180:CDS 30.0%
! AAACCACTCAATGTATTTTC+TGG - tig0030384:3832-3851 None:intergenic 30.0%
ATTGTATCTGTTGAAGATAC+AGG + tig0030384:3955-3974 Msa1443180:CDS 30.0%
! TTTTACACTCATTAGAACTG+AGG - tig0030384:4188-4207 None:intergenic 30.0%
GAACAAGAGAACTCTAAATA+GGG + tig0030384:4638-4657 Msa1443180:CDS 30.0%
!!! TCTTCTCCACATTTTTTATG+TGG - tig0030384:4950-4969 None:intergenic 30.0%
! CATAAATTGTGGTATTTCTG+TGG - tig0030384:5135-5154 None:intergenic 30.0%
ATCATCATTGTGTTAGAAGT+TGG + tig0030384:5178-5197 Msa1443180:intron 30.0%
!! ACACAGAAGTATCTATAAAC+TGG + tig0030384:5271-5290 Msa1443180:CDS 30.0%
! TTTTACTACCAACTACAACT+TGG - tig0030384:5634-5653 None:intergenic 30.0%
CTTTACATGGAAGAATCAAT+GGG - tig0030384:5666-5685 None:intergenic 30.0%
ACTTTACATGGAAGAATCAA+TGG - tig0030384:5667-5686 None:intergenic 30.0%
GGTTGATTGAAGTGAAATAA+AGG + tig0030384:5763-5782 Msa1443180:three_prime_UTR 30.0%
GAAGTGAAATAAAGGAAAGT+AGG + tig0030384:5771-5790 Msa1443180:three_prime_UTR 30.0%
AATAAAGGAAAGTAGGTTCT+TGG + tig0030384:5778-5797 Msa1443180:three_prime_UTR 30.0%
ACTATAGTATAGTGTAAGAG+TGG + tig0030384:5947-5966 Msa1443180:three_prime_UTR 30.0%
GAGTCACATATACAAAGATG+TGG + tig0030384:102-121 Msa1443180:exon 35.0%
ATACAAAGATGTGGCTGAAA+TGG + tig0030384:111-130 Msa1443180:exon 35.0%
!! AAATGGTGGGAGAAGATTTT+AGG + tig0030384:128-147 Msa1443180:CDS 35.0%
!! AATGGTGGGAGAAGATTTTA+GGG + tig0030384:129-148 Msa1443180:CDS 35.0%
CAACAGTACTGTCAGTATAT+TGG + tig0030384:170-189 Msa1443180:CDS 35.0%
! GAGAAAGCTTTTGTTGACAT+GGG + tig0030384:220-239 Msa1443180:CDS 35.0%
! CTTTTGTTGACATGGGTATT+GGG + tig0030384:227-246 Msa1443180:CDS 35.0%
! ATCAAAGATTGTTCTAGGCA+AGG + tig0030384:500-519 Msa1443180:intron 35.0%
GAACAATTTGAGAAGCAACA+AGG + tig0030384:847-866 Msa1443180:CDS 35.0%
AATTTGAGAAGCAACAAGGT+TGG + tig0030384:851-870 Msa1443180:CDS 35.0%
GCATAATCGTTCTTATGAAC+TGG - tig0030384:910-929 None:intergenic 35.0%
TAAGAACGATTATGCTGTAG+AGG + tig0030384:915-934 Msa1443180:CDS 35.0%
GTATCTTGTGCAAATATGAC+AGG - tig0030384:976-995 None:intergenic 35.0%
! TGTTGATATGCTTTCTGGAA+AGG + tig0030384:1014-1033 Msa1443180:CDS 35.0%
ACTAGTTCAGCTGAAAACTT+TGG - tig0030384:1080-1099 None:intergenic 35.0%
AGCTGAACTAGTATACCTAA+TGG + tig0030384:1088-1107 Msa1443180:intron 35.0%
ACAAATTCATCGAGTCAGAT+AGG + tig0030384:1271-1290 Msa1443180:intron 35.0%
!! TTTGATTTGAGAAGCCTGAA+GGG - tig0030384:1421-1440 None:intergenic 35.0%
!! ATTTGATTTGAGAAGCCTGA+AGG - tig0030384:1422-1441 None:intergenic 35.0%
TCAGGCTTCTCAAATCAAAT+CGG + tig0030384:1422-1441 Msa1443180:CDS 35.0%
CTTCTCAAATCAAATCGGTT+AGG + tig0030384:1427-1446 Msa1443180:CDS 35.0%
TGGAAGATATCTCTTGTAGA+CGG - tig0030384:1470-1489 None:intergenic 35.0%
! TCATTTGGAGTTGCATTTGA+TGG - tig0030384:1490-1509 None:intergenic 35.0%
CAAATGCAACTCCAAATGAA+AGG + tig0030384:1491-1510 Msa1443180:CDS 35.0%
GTTGCTTGAATCCTTTCATT+TGG - tig0030384:1505-1524 None:intergenic 35.0%
GAAAGGATTCAAGCAACTAA+TGG + tig0030384:1508-1527 Msa1443180:CDS 35.0%
CAGAACTTTAGATAAACCAG+AGG - tig0030384:1613-1632 None:intergenic 35.0%
AACACTCCATTCACATTTGA+TGG + tig0030384:1658-1677 Msa1443180:intron 35.0%
ACACTCCATTCACATTTGAT+GGG + tig0030384:1659-1678 Msa1443180:intron 35.0%
GAACATAATTAGGCCATGTT+TGG + tig0030384:1700-1719 Msa1443180:intron 35.0%
CAAATACGTCAATCCAAACA+TGG - tig0030384:1716-1735 None:intergenic 35.0%
TGTGAATCGTGATACTGTTT+GGG + tig0030384:1760-1779 Msa1443180:intron 35.0%
TATGGGAACAACTTATGACA+TGG + tig0030384:1789-1808 Msa1443180:intron 35.0%
TTTATTTCCATGAGCTATCC+AGG + tig0030384:1829-1848 Msa1443180:intron 35.0%
CAAGACCTTAACTATCACAA+GGG - tig0030384:2046-2065 None:intergenic 35.0%
TCAAGACCTTAACTATCACA+AGG - tig0030384:2047-2066 None:intergenic 35.0%
GTATGGCTCAAATATATCAG+GGG + tig0030384:2313-2332 Msa1443180:CDS 35.0%
GAAGTTAATATTGCAGCACA+TGG - tig0030384:2517-2536 None:intergenic 35.0%
AAAAAGGTAGATGCATACCT+GGG - tig0030384:2677-2696 None:intergenic 35.0%
TAAAAAGGTAGATGCATACC+TGG - tig0030384:2678-2697 None:intergenic 35.0%
CTTAACCTGCACTAATTACA+CGG + tig0030384:2716-2735 Msa1443180:intron 35.0%
TCACCTAAAACACCATTCAT+CGG - tig0030384:2797-2816 None:intergenic 35.0%
GGTGAGTTCTCTAATGTTTA+TGG + tig0030384:2812-2831 Msa1443180:intron 35.0%
GATCAGGCAAAGATTGAATT+TGG + tig0030384:3024-3043 Msa1443180:CDS 35.0%
! CTATTTTCTGATAAGTCCCA+AGG + tig0030384:3108-3127 Msa1443180:CDS 35.0%
GAGTCGAGGTAATATATTCT+TGG + tig0030384:3136-3155 Msa1443180:intron 35.0%
AATTGTTTGGCAATCACAGT+TGG + tig0030384:3228-3247 Msa1443180:intron 35.0%
CAAGTTCCTAAACTGCTAAT+AGG + tig0030384:3268-3287 Msa1443180:CDS 35.0%
AAGCTATCCTAGAGAGTTTA+TGG + tig0030384:3518-3537 Msa1443180:intron 35.0%
TGAGTTTATCTGCTAGCATA+AGG - tig0030384:3592-3611 None:intergenic 35.0%
TCAAGTAAGTCAAACCAAAC+AGG + tig0030384:3609-3628 Msa1443180:intron 35.0%
TATCTGACTAAAAGCCTGTT+TGG - tig0030384:3626-3645 None:intergenic 35.0%
GGAGATTGTTCATTCTATAG+AGG + tig0030384:3789-3808 Msa1443180:CDS 35.0%
ATTGATGAGATCACTAGAGA+TGG - tig0030384:3932-3951 None:intergenic 35.0%
ACTAAGCATTAGCAAGTGTT+TGG + tig0030384:4074-4093 Msa1443180:CDS 35.0%
TTTGCAAGTGAACCAAAAAC+TGG + tig0030384:4123-4142 Msa1443180:CDS 35.0%
! GTAAAAGTGGAACCAGTTTT+TGG - tig0030384:4138-4157 None:intergenic 35.0%
GACAGCAGTAAAAGTAAAAG+TGG - tig0030384:4151-4170 None:intergenic 35.0%
!!! CTGAATATGCAGGTTTTGTT+TGG - tig0030384:4227-4246 None:intergenic 35.0%
ACCTGCATATTCAGAATTTG+AGG + tig0030384:4233-4252 Msa1443180:CDS 35.0%
CCTGCATATTCAGAATTTGA+GGG + tig0030384:4234-4253 Msa1443180:CDS 35.0%
! ATTTGAGGGTATGAATGCAT+TGG + tig0030384:4248-4267 Msa1443180:CDS 35.0%
! ACTTTTGCTCTAATAGGTCT+TGG - tig0030384:4282-4301 None:intergenic 35.0%
! TGAGACACTTTTGCTCTAAT+AGG - tig0030384:4288-4307 None:intergenic 35.0%
! AACTGCATTCCCTTTGTTTA+TGG - tig0030384:4376-4395 None:intergenic 35.0%
!!! CTCATTTTTTCGATAGCACA+AGG + tig0030384:4451-4470 Msa1443180:CDS 35.0%
ACAAGAATGAACAACTTTGG+AGG - tig0030384:4495-4514 None:intergenic 35.0%
!!! AGTGGTTTTGTGATGATAGT+AGG - tig0030384:4570-4589 None:intergenic 35.0%
TATCATCACAAAACCACTCA+GGG + tig0030384:4572-4591 Msa1443180:CDS 35.0%
GGAACAAGAGAACTCTAAAT+AGG + tig0030384:4637-4656 Msa1443180:CDS 35.0%
! GGCTAAGAGACAAATTTTGA+AGG - tig0030384:4665-4684 None:intergenic 35.0%
GGATATTCAAATGCCAGAAA+TGG + tig0030384:4851-4870 Msa1443180:CDS 35.0%
ATTCAAATGCCAGAAATGGA+TGG + tig0030384:4855-4874 Msa1443180:CDS 35.0%
TTCAAATGCCAGAAATGGAT+GGG + tig0030384:4856-4875 Msa1443180:CDS 35.0%
ATCTACATAGAAGACACACA+AGG + tig0030384:5088-5107 Msa1443180:intron 35.0%
!!! TTCAACAGTTTTGAAGCTAC+AGG + tig0030384:5219-5238 Msa1443180:intron 35.0%
TAAAGTTGTTCGGCTTCAAA+TGG - tig0030384:5387-5406 None:intergenic 35.0%
TTGAAGCCGAACAACTTTAT+CGG + tig0030384:5388-5407 Msa1443180:CDS 35.0%
AACTTCCCGATAAAGTTGTT+CGG - tig0030384:5397-5416 None:intergenic 35.0%
AACTTTATCGGGAAGTTTCT+CGG + tig0030384:5400-5419 Msa1443180:CDS 35.0%
!! CTGTTTCTTTTCAAGATGAC+AGG - tig0030384:5431-5450 None:intergenic 35.0%
TATCTCATCGTCTCACAAAA+GGG + tig0030384:5484-5503 Msa1443180:three_prime_UTR 35.0%
AAAGGGAGGAAATATTGAAC+TGG + tig0030384:5501-5520 Msa1443180:three_prime_UTR 35.0%
CATGTAAAGTTGTGTAGTCT+AGG + tig0030384:5710-5729 Msa1443180:three_prime_UTR 35.0%
AAGTAGGTTCTTGGAAACAA+AGG + tig0030384:5787-5806 Msa1443180:three_prime_UTR 35.0%
!! TTCTTAAAAGTGCCGGAATT+TGG + tig0030384:5879-5898 Msa1443180:three_prime_UTR 35.0%
AAAGATGTGGCTGAAATGGT+GGG + tig0030384:115-134 Msa1443180:exon 40.0%
!! TGGGAGAAGATTTTAGGGAA+TGG + tig0030384:134-153 Msa1443180:CDS 40.0%
! GGAGAAAGCTTTTGTTGACA+TGG + tig0030384:219-238 Msa1443180:CDS 40.0%
! GCTTTTGTTGACATGGGTAT+TGG + tig0030384:226-245 Msa1443180:CDS 40.0%
GTTTACAAGCTACTGAGAAG+AGG + tig0030384:288-307 Msa1443180:CDS 40.0%
TTGCTAGCATGTGTGATGAA+AGG + tig0030384:321-340 Msa1443180:CDS 40.0%
TGCTAGCATGTGTGATGAAA+GGG + tig0030384:322-341 Msa1443180:CDS 40.0%
TCTGCAAGAGTCGAATTGAT+CGG - tig0030384:543-562 None:intergenic 40.0%
TCTTACAACTCTGTCACACA+TGG + tig0030384:585-604 Msa1443180:intron 40.0%
TGTCGTGTACGATGTCATAT+TGG + tig0030384:660-679 Msa1443180:intron 40.0%
! CAGAAAGAACAGCTTTTGAG+AGG + tig0030384:773-792 Msa1443180:CDS 40.0%
CGATTATGCTGTAGAGGAAT+TGG + tig0030384:921-940 Msa1443180:CDS 40.0%
AGCATATTCTTCCTGAAGAG+GGG - tig0030384:953-972 None:intergenic 40.0%
GAGCATATTCTTCCTGAAGA+GGG - tig0030384:954-973 None:intergenic 40.0%
! GATATGCTTTCTGGAAAGGT+AGG + tig0030384:1018-1037 Msa1443180:intron 40.0%
! AACGGATTCAGATTATCACC+AGG - tig0030384:1175-1194 None:intergenic 40.0%
AAGCTTGAGCAAAGAGTGAA+CGG - tig0030384:1193-1212 None:intergenic 40.0%
TCACTCTTTGCTCAAGCTTT+AGG + tig0030384:1194-1213 Msa1443180:intron 40.0%
CACTCTTTGCTCAAGCTTTA+GGG + tig0030384:1195-1214 Msa1443180:intron 40.0%
TGTCTCTACAGTTGTACACA+AGG - tig0030384:1254-1273 None:intergenic 40.0%
TCGAGTCAGATAGGACTATA+TGG + tig0030384:1280-1299 Msa1443180:intron 40.0%
TTGCACGCAACACATTATCA+CGG - tig0030384:1369-1388 None:intergenic 40.0%
TCTTGTAGACGGCAAATGTA+AGG - tig0030384:1459-1478 None:intergenic 40.0%
! TATAGTTTAGCTTACGCCTC+TGG + tig0030384:1594-1613 Msa1443180:intron 40.0%
! GAATGGAGTGTTTAGTTGCT+TGG - tig0030384:1650-1669 None:intergenic 40.0%
CAAACAGTATCACGATTCAC+AGG - tig0030384:1761-1780 None:intergenic 40.0%
CTGTGAATCGTGATACTGTT+TGG + tig0030384:1759-1778 Msa1443180:intron 40.0%
ATACTGTTTGGGAGAGCTTA+TGG + tig0030384:1771-1790 Msa1443180:intron 40.0%
TACTGTTTGGGAGAGCTTAT+GGG + tig0030384:1772-1791 Msa1443180:intron 40.0%
CTCTTCCCTTGTGATAGTTA+AGG + tig0030384:2038-2057 Msa1443180:intron 40.0%
TTGCTAAACAGGTATCTTGG+TGG + tig0030384:2179-2198 Msa1443180:intron 40.0%
TGCTAAACAGGTATCTTGGT+GGG + tig0030384:2180-2199 Msa1443180:intron 40.0%
ACTCATCCAATTGCCATGTA+TGG + tig0030384:2296-2315 Msa1443180:CDS 40.0%
TTTGAGCCATACATGGCAAT+TGG - tig0030384:2305-2324 None:intergenic 40.0%
CATGTCAGCACTCTTAACTT+TGG + tig0030384:2347-2366 Msa1443180:CDS 40.0%
! TTAACTTTGGTGACCCTTTC+AGG + tig0030384:2360-2379 Msa1443180:CDS 40.0%
GCATCTCATGTTTCCTGAAA+GGG - tig0030384:2376-2395 None:intergenic 40.0%
TGCATCTCATGTTTCCTGAA+AGG - tig0030384:2377-2396 None:intergenic 40.0%
CTGAACATTAAGAAGGACAG+AGG - tig0030384:2425-2444 None:intergenic 40.0%
TTTAAGTCCGATTCTTACCC+AGG + tig0030384:2470-2489 Msa1443180:intron 40.0%
GTTTGAACCTGGGTAAGAAT+CGG - tig0030384:2480-2499 None:intergenic 40.0%
AATATTGCAGCACATGGCAA+AGG - tig0030384:2511-2530 None:intergenic 40.0%
!! CTTGTTATTGCTCTCCTTGT+TGG + tig0030384:2547-2566 Msa1443180:CDS 40.0%
! TTTTGCAATTCGATTCACGG+TGG - tig0030384:2587-2606 None:intergenic 40.0%
GATGGAGCTTAAAAAACGTG+CGG + tig0030384:2630-2649 Msa1443180:CDS 40.0%
TCTGATTTCATGGGAAACAG+TGG - tig0030384:2771-2790 None:intergenic 40.0%
! CATCGGTGTTCTGATTTCAT+GGG - tig0030384:2780-2799 None:intergenic 40.0%
! TCATCGGTGTTCTGATTTCA+TGG - tig0030384:2781-2800 None:intergenic 40.0%
GAAATCAGAACACCGATGAA+TGG + tig0030384:2782-2801 Msa1443180:CDS 40.0%
! ACACCGATGAATGGTGTTTT+AGG + tig0030384:2791-2810 Msa1443180:CDS 40.0%
AGGGATGATGCATATGCTTA+TGG + tig0030384:2912-2931 Msa1443180:intron 40.0%
ATTTGGTAAGCTAGAGCTTG+AGG + tig0030384:3041-3060 Msa1443180:CDS 40.0%
TCTGATAAGTCCCAAGGAAA+AGG + tig0030384:3114-3133 Msa1443180:CDS 40.0%
GGATCACCTATTAGCAGTTT+AGG - tig0030384:3277-3296 None:intergenic 40.0%
AAACTGCTAATAGGTGATCC+TGG + tig0030384:3277-3296 Msa1443180:CDS 40.0%
ATTATTTGCCGAAACCTTCC+AGG - tig0030384:3298-3317 None:intergenic 40.0%
TCTCATGGGCAACTCAATTA+AGG + tig0030384:3324-3343 Msa1443180:CDS 40.0%
! CATGTCACTTAGGCAATGTT+TGG + tig0030384:3367-3386 Msa1443180:intron 40.0%
GACATGTCCATAAACTCTCT+AGG - tig0030384:3528-3547 None:intergenic 40.0%
! GTTTTGCAGTTCACAGACAA+AGG + tig0030384:3736-3755 Msa1443180:intron 40.0%
TGTGACTATCCATCTTGTTG+AGG + tig0030384:3768-3787 Msa1443180:CDS 40.0%
GAACAATCTCCTCAACAAGA+TGG - tig0030384:3780-3799 None:intergenic 40.0%
! TCAGGCAACTTTTCACAACA+GGG - tig0030384:3855-3874 None:intergenic 40.0%
TTGTGAAAAGTTGCCTGAGT+TGG + tig0030384:3857-3876 Msa1443180:CDS 40.0%
! AAAAGTTGCCTGAGTTGGAA+AGG + tig0030384:3862-3881 Msa1443180:CDS 40.0%
TTCAAGGCTTTCAGTCAAGA+TGG + tig0030384:3886-3905 Msa1443180:CDS 40.0%
ATGGAAGAGAAAGAACCAAG+TGG - tig0030384:3913-3932 None:intergenic 40.0%
TCTGTTGAAGATACAGGTGA+CGG + tig0030384:3961-3980 Msa1443180:CDS 40.0%
ATGAGAGGTTGAGATTCTCT+AGG - tig0030384:3991-4010 None:intergenic 40.0%
ATGAATGGAGTGAAGATGAG+AGG - tig0030384:4006-4025 None:intergenic 40.0%
TTCACTCCATTCATGCAAGT+AGG + tig0030384:4012-4031 Msa1443180:CDS 40.0%
! TACCAGTTCCTCCATGTTTT+CGG - tig0030384:4050-4069 None:intergenic 40.0%
AAACATGGAGGAACTGGTAT+TGG + tig0030384:4051-4070 Msa1443180:CDS 40.0%
AGCATTAGCAAGTGTTTGGT+TGG + tig0030384:4078-4097 Msa1443180:CDS 40.0%
ATCCAATTTCGCCATTCATG+AGG - tig0030384:4104-4123 None:intergenic 40.0%
ATTAGAACTGAGGAGTCCAT+TGG - tig0030384:4178-4197 None:intergenic 40.0%
CCCTCAAATTCTGAATATGC+AGG - tig0030384:4237-4256 None:intergenic 40.0%
ACGGTTTCAGATTTGAACCA+AGG + tig0030384:4342-4361 Msa1443180:CDS 40.0%
CGGTTTCAGATTTGAACCAA+GGG + tig0030384:4343-4362 Msa1443180:CDS 40.0%
GGTTTCAGATTTGAACCAAG+GGG + tig0030384:4344-4363 Msa1443180:CDS 40.0%
GGGTGTCAACCATAAACAAA+GGG + tig0030384:4364-4383 Msa1443180:CDS 40.0%
AGGGAATGCAGTTATCAACA+TGG + tig0030384:4383-4402 Msa1443180:CDS 40.0%
TCTTGATTGAGCAGGAAGTT+TGG + tig0030384:4406-4425 Msa1443180:CDS 40.0%
CTATCATCACAAAACCACTC+AGG + tig0030384:4571-4590 Msa1443180:CDS 40.0%
TACAGCGAGAGATGAATGTT+AGG + tig0030384:4616-4635 Msa1443180:CDS 40.0%
TCTCTTAGCCATCTTCTTGT+TGG + tig0030384:4675-4694 Msa1443180:CDS 40.0%
CTCTTAGCCATCTTCTTGTT+GGG + tig0030384:4676-4695 Msa1443180:CDS 40.0%
! TTTTCCTCCCAACAAGAAGA+TGG - tig0030384:4686-4705 None:intergenic 40.0%
!! GCTGGTGCTTTGAAAAAGTA+TGG + tig0030384:4747-4766 Msa1443180:CDS 40.0%
! GAAAAAGTATGGAGCAGATG+TGG + tig0030384:4758-4777 Msa1443180:CDS 40.0%
ATTGCATACCCATCCATTTC+TGG - tig0030384:4867-4886 None:intergenic 40.0%
TACAGGTAGAATCAGAGAGA+TGG + tig0030384:5236-5255 Msa1443180:CDS 40.0%
TCTGCAGTCATCGCTAAAAT+CGG - tig0030384:5303-5322 None:intergenic 40.0%
GATGACTGCAGATGTAATTC+AGG + tig0030384:5311-5330 Msa1443180:CDS 40.0%
CTACACATGAGAAATGCCTA+AGG + tig0030384:5334-5353 Msa1443180:CDS 40.0%
TGAAGCCGAACAACTTTATC+GGG + tig0030384:5389-5408 Msa1443180:CDS 40.0%
CTATCTCATCGTCTCACAAA+AGG + tig0030384:5483-5502 Msa1443180:three_prime_UTR 40.0%
! TGCTGTTTATGAAAGATCCC+TGG + tig0030384:5565-5584 Msa1443180:three_prime_UTR 40.0%
AGTAGGATCCAAGTTGTAGT+TGG + tig0030384:5623-5642 Msa1443180:three_prime_UTR 40.0%
! ACTGAGAGACTGACTTTACA+TGG - tig0030384:5679-5698 None:intergenic 40.0%
! CCTTGTGTTCTTAAAAGTGC+CGG + tig0030384:5872-5891 Msa1443180:three_prime_UTR 40.0%
CAAAGATGTGGCTGAAATGG+TGG + tig0030384:114-133 Msa1443180:exon 45.0%
AGAGAGTGAAGAGAGAGTTG+TGG + tig0030384:198-217 Msa1443180:CDS 45.0%
!! TGTTGACATGGGTATTGGGT+TGG + tig0030384:231-250 Msa1443180:CDS 45.0%
GTTGGACTGTAGTGTCTTTG+TGG + tig0030384:249-268 Msa1443180:CDS 45.0%
TGAAAGGGCTAGGATTGTTC+AGG + tig0030384:337-356 Msa1443180:CDS 45.0%
AGTACCTGATCAATGGCTGA+GGG - tig0030384:437-456 None:intergenic 45.0%
AAGTACCTGATCAATGGCTG+AGG - tig0030384:438-457 None:intergenic 45.0%
CTGCAAGAGTCGAATTGATC+GGG - tig0030384:542-561 None:intergenic 45.0%
CAATTCGACTCTTGCAGATC+AGG + tig0030384:545-564 Msa1443180:intron 45.0%
TTTGAGAGGCCTCTAACAAG+TGG + tig0030384:787-806 Msa1443180:CDS 45.0%
! TATGCCACACCACTTGTTAG+AGG - tig0030384:799-818 None:intergenic 45.0%
TATTCTTCCTGAAGAGGGGA+TGG - tig0030384:949-968 None:intergenic 45.0%
GGAGCATATTCTTCCTGAAG+AGG - tig0030384:955-974 None:intergenic 45.0%
GTGCAAGAGAATCAGGCAAA+GGG + tig0030384:1383-1402 Msa1443180:CDS 45.0%
TGCAAGAGAATCAGGCAAAG+GGG + tig0030384:1384-1403 Msa1443180:CDS 45.0%
GCTAAACAGGTATCTTGGTG+GGG + tig0030384:2181-2200 Msa1443180:intron 45.0%
GGAAACATGAGATGCATTGC+AGG + tig0030384:2381-2400 Msa1443180:CDS 45.0%
AGCAGATGTTGCAAAATCCC+AGG + tig0030384:2657-2676 Msa1443180:CDS 45.0%
CAAGTCCGTGTAATTAGTGC+AGG - tig0030384:2724-2743 None:intergenic 45.0%
GGAATATGTCAGAACAGCAC+AGG + tig0030384:2960-2979 Msa1443180:CDS 45.0%
! TACCTCGACTCCTTTTCCTT+GGG - tig0030384:3127-3146 None:intergenic 45.0%
! TTACCTCGACTCCTTTTCCT+TGG - tig0030384:3128-3147 None:intergenic 45.0%
TGCTAATAGGTGATCCTGGA+AGG + tig0030384:3281-3300 Msa1443180:CDS 45.0%
TAGGTGATCCTGGAAGGTTT+CGG + tig0030384:3287-3306 Msa1443180:CDS 45.0%
! CTCAGGCAACTTTTCACAAC+AGG - tig0030384:3856-3875 None:intergenic 45.0%
CCTTGAATCCTTTCCAACTC+AGG - tig0030384:3873-3892 None:intergenic 45.0%
! CCTGAGTTGGAAAGGATTCA+AGG + tig0030384:3870-3889 Msa1443180:CDS 45.0%
TTCAGTCAAGATGGACCACT+TGG + tig0030384:3895-3914 Msa1443180:CDS 45.0%
GACGAACCTACTTGCATGAA+TGG - tig0030384:4021-4040 None:intergenic 45.0%
! ACCAGTTCCTCCATGTTTTC+GGG - tig0030384:4049-4068 None:intergenic 45.0%
!! TGTTTGGTTGGCCTCATGAA+TGG + tig0030384:4090-4109 Msa1443180:CDS 45.0%
TTTACTGCTGTCTTCGCCAA+TGG + tig0030384:4159-4178 Msa1443180:CDS 45.0%
CAATATCACATCCAACGCCT+TGG + tig0030384:4306-4325 Msa1443180:CDS 45.0%
CCTTGGCATTCACGTTGAAA+CGG + tig0030384:4323-4342 Msa1443180:CDS 45.0%
TGTTTATGGTTGACACCCCT+TGG - tig0030384:4362-4381 None:intergenic 45.0%
! GGGGTGTCAACCATAAACAA+AGG + tig0030384:4363-4382 Msa1443180:CDS 45.0%
! CAACATGGTCTTGATTGAGC+AGG + tig0030384:4398-4417 Msa1443180:CDS 45.0%
AGCACAAGGAAAATCAGCCA+CGG + tig0030384:4465-4484 Msa1443180:CDS 45.0%
! ACAACTTTGGAGGAAAACCG+TGG - tig0030384:4485-4504 None:intergenic 45.0%
TTAGCCATCTTCTTGTTGGG+AGG + tig0030384:4679-4698 Msa1443180:CDS 45.0%
! GATGTGGTTTGTGTTAGCAG+TGG + tig0030384:4774-4793 Msa1443180:CDS 45.0%
AAACATGCGTCGAACTGATG+AGG - tig0030384:4828-4847 None:intergenic 45.0%
TCAGTTCGACGCATGTTTCA+TGG + tig0030384:4830-4849 Msa1443180:CDS 45.0%
CATGAGAAATGCCTAAGGTG+TGG + tig0030384:5339-5358 Msa1443180:CDS 45.0%
GAAATGCCTAAGGTGTGGAA+TGG + tig0030384:5344-5363 Msa1443180:CDS 45.0%
! TGATAGGGAGTGTGCATAGT+AGG + tig0030384:5606-5625 Msa1443180:three_prime_UTR 45.0%
!! CCGGCACTTTTAAGAACACA+AGG - tig0030384:5875-5894 None:intergenic 45.0%
!! ATTTATTAAACAAATTAAAA+AGG - tig0030384:2693-2712 None:intergenic 5.0%
!!! TTTTAATTTGTTTAATAAAT+TGG + tig0030384:2693-2712 Msa1443180:intron 5.0%
GCATGTGTGATGAAAGGGCT+AGG + tig0030384:327-346 Msa1443180:CDS 50.0%
TCTAGGCAAGGTTCGAAAGC+CGG + tig0030384:512-531 Msa1443180:intron 50.0%
! GTCGAATTGATCGGGAGTAC+CGG - tig0030384:534-553 None:intergenic 50.0%
ACGACACTGACACGTCAACA+CGG - tig0030384:646-665 None:intergenic 50.0%
GTGTTGCGTGCAAGAGAATC+AGG + tig0030384:1376-1395 Msa1443180:CDS 50.0%
CGTGCAAGAGAATCAGGCAA+AGG + tig0030384:1382-1401 Msa1443180:CDS 50.0%
!!! GGGTTTTAACTGCACCCTTC+AGG + tig0030384:1404-1423 Msa1443180:CDS 50.0%
AAGCTGTCCTGGATAGCTCA+TGG - tig0030384:1839-1858 None:intergenic 50.0%
GGCGGTTTCTGTTTGAACCT+GGG - tig0030384:2490-2509 None:intergenic 50.0%
AGGCGGTTTCTGTTTGAACC+TGG - tig0030384:2491-2510 None:intergenic 50.0%
ATTGCAGCACATGGCAAAGG+CGG - tig0030384:2508-2527 None:intergenic 50.0%
GGAGCTTAAAAAACGTGCGG+AGG + tig0030384:2633-2652 Msa1443180:CDS 50.0%
GTCAGAACAGCACAGGAAAG+TGG + tig0030384:2967-2986 Msa1443180:CDS 50.0%
TCGTCGATCTCCCGAAAACA+TGG + tig0030384:4036-4055 Msa1443180:CDS 50.0%
TCGATCTCCCGAAAACATGG+AGG + tig0030384:4039-4058 Msa1443180:CDS 50.0%
TCCCGAAAACATGGAGGAAC+TGG + tig0030384:4045-4064 Msa1443180:CDS 50.0%
GGCCTCATGAATGGCGAAAT+TGG + tig0030384:4099-4118 Msa1443180:CDS 50.0%
CCGTTTCAACGTGAATGCCA+AGG - tig0030384:4326-4345 None:intergenic 50.0%
TGCCTAAGGTGTGGAATGGA+TGG + tig0030384:5348-5367 Msa1443180:CDS 50.0%
GCCTAAGGTGTGGAATGGAT+GGG + tig0030384:5349-5368 Msa1443180:CDS 50.0%
ACCCATCCATTCCACACCTT+AGG - tig0030384:5353-5372 None:intergenic 50.0%
CTCATCGTCTCACAAAAGGG+AGG + tig0030384:5487-5506 Msa1443180:three_prime_UTR 50.0%
GAGTCCCTCAGCCATTGATC+AGG + tig0030384:430-449 Msa1443180:CDS 55.0%
CGACACTGACACGTCAACAC+GGG - tig0030384:645-664 None:intergenic 55.0%
GAGGCCTCTAACAAGTGGTG+TGG + tig0030384:792-811 Msa1443180:CDS 55.0%
ATTGGAGCCATCCCCTCTTC+AGG + tig0030384:939-958 Msa1443180:CDS 55.0%
GTCCCAAGGAAAAGGAGTCG+AGG + tig0030384:3122-3141 Msa1443180:CDS 55.0%
CAACGTGAATGCCAAGGCGT+TGG - tig0030384:4320-4339 None:intergenic 55.0%
GTGAATCGTGCAGTAGCAGC+TGG + tig0030384:4729-4748 Msa1443180:CDS 55.0%
CATGCGTCGAACTGATGAGG+TGG - tig0030384:4825-4844 None:intergenic 55.0%
GCAAGCATGCTTGCCCTGAG+TGG - tig0030384:4588-4607 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0030384 gene 1 5981 1 ID=Msa1443180;Name=Msa1443180
tig0030384 mRNA 1 5981 1 ID=Msa1443180-mRNA-1;Parent=Msa1443180;Name=Msa1443180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=118|1|1|1|1|1|10|541|970
tig0030384 exon 1 451 1 ID=Msa1443180-mRNA-1:exon:13767;Parent=Msa1443180-mRNA-1
tig0030384 exon 754 1035 754 ID=Msa1443180-mRNA-1:exon:13768;Parent=Msa1443180-mRNA-1
tig0030384 exon 1361 1530 1361 ID=Msa1443180-mRNA-1:exon:13769;Parent=Msa1443180-mRNA-1
tig0030384 exon 2190 2402 2190 ID=Msa1443180-mRNA-1:exon:13770;Parent=Msa1443180-mRNA-1
tig0030384 exon 2492 2678 2492 ID=Msa1443180-mRNA-1:exon:13771;Parent=Msa1443180-mRNA-1
tig0030384 exon 2761 2812 2761 ID=Msa1443180-mRNA-1:exon:13772;Parent=Msa1443180-mRNA-1
tig0030384 exon 2914 3143 2914 ID=Msa1443180-mRNA-1:exon:13773;Parent=Msa1443180-mRNA-1
tig0030384 exon 3247 3345 3247 ID=Msa1443180-mRNA-1:exon:13774;Parent=Msa1443180-mRNA-1
tig0030384 exon 3745 4877 3745 ID=Msa1443180-mRNA-1:exon:13775;Parent=Msa1443180-mRNA-1
tig0030384 exon 5227 5981 5227 ID=Msa1443180-mRNA-1:exon:13776;Parent=Msa1443180-mRNA-1
tig0030384 five_prime_UTR 1 118 1 ID=Msa1443180-mRNA-1:five_prime_utr;Parent=Msa1443180-mRNA-1
tig0030384 CDS 119 451 119 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 754 1035 754 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 1361 1530 1361 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 2190 2402 2190 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 2492 2678 2492 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 2761 2812 2761 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 2914 3143 2914 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 3247 3345 3247 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 3745 4877 3745 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 CDS 5227 5440 5227 ID=Msa1443180-mRNA-1:cds;Parent=Msa1443180-mRNA-1
tig0030384 three_prime_UTR 5441 5981 5441 ID=Msa1443180-mRNA-1:three_prime_utr;Parent=Msa1443180-mRNA-1
Gene Sequence

>Msa1443180

ATGTGGCTGAAATGGTGGGAGAAGATTTTAGGGAATGGTTACAAAATCAATCAACAGTACTGTCAGTATATTGGGTCAAAGAGAGTGAAGAGAGAGTTGTGGAGAAAGCTTTTGTTGACATGGGTATTGGGTTGGACTGTAGTGTCTTTGTGGATCTTCTGCTTTATGAGTTTACAAGCTACTGAGAAGAGGAAAGAAACTCTTGCTAGCATGTGTGATGAAAGGGCTAGGATTGTTCAGGATCAGTTTAATGTTAGTATGAACCATATTCAAGCTATGTCTATTTTGATCTCAACTTTTCATCATGCTAAGAGTCCCTCAGCCATTGATCAGAGAACTTTTGCTAGCTACACAGAAAGAACAGCTTTTGAGAGGCCTCTAACAAGTGGTGTGGCATATGCTGTAAGAGTGCTTCATTATGAAAGGGAACAATTTGAGAAGCAACAAGGTTGGATTATTAAGAGAATGGATACTCTAGAGCAGAATCCAGTTCATAAGAACGATTATGCTGTAGAGGAATTGGAGCCATCCCCTCTTCAGGAAGAATATGCTCCTGTCATATTTGCACAAGATACAATTTCACATGTCATTTCTGTTGATATGCTTTCTGGAAAGGAAGACCGTGATAATGTGTTGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCACCCTTCAGGCTTCTCAAATCAAATCGGTTAGGAGTTATCCTTACATTTGCCGTCTACAAGAGATATCTTCCATCAAATGCAACTCCAAATGAAAGGATTCAAGCAACTAATGGGTATCTTGGTGGGGTATTTGATGTTGAGTCATTAGTGGAGAAATTACTTGAGCAACTTGCTAGCAAGCAAAGTGTAATTGTTAATGTATATGACACTACAAATCATACTCATCCAATTGCCATGTATGGCTCAAATATATCAGGGGATGTGTTCAATCATGTCAGCACTCTTAACTTTGGTGACCCTTTCAGGAAACATGAGATGCATTGCAGGTTCAAACAGAAACCGCCTTTGCCATGTGCTGCAATATTAACTTCAATTGGCATTCTTGTTATTGCTCTCCTTGTTGGACATATTTTCTATGCCACCGTGAATCGAATTGCAAAAGTAGAAGATGATTACCATGAAATGATGGAGCTTAAAAAACGTGCGGAGGCAGCAGATGTTGCAAAATCCCAGTTTCTTGCCACTGTTTCCCATGAAATCAGAACACCGATGAATGGTGTTTTAGGGATGATGCATATGCTTATGGACACAGATTTAGATGTAACTCAACAGGAATATGTCAGAACAGCACAGGAAAGTGGAAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAATTTGGTAAGCTAGAGCTTGAGGCAGTGCTTTTTGACATACGTTCGATTTTGGATGATGTATTGTCACTATTTTCTGATAAGTCCCAAGGAAAAGGAGTCGAGTTGGCAGCTTATGTGTCAGATCAAGTTCCTAAACTGCTAATAGGTGATCCTGGAAGGTTTCGGCAAATAATTACTAATCTCATGGGCAACTCAATTAAGTTCACAGACAAAGGACACATTTTTGTGACTATCCATCTTGTTGAGGAGATTGTTCATTCTATAGAGGTTGACAATGAATCAAATCCAGAAAATACATTGAGTGGTTTCCCTGTTGTGAAAAGTTGCCTGAGTTGGAAAGGATTCAAGGCTTTCAGTCAAGATGGACCACTTGGTTCTTTCTCTTCCATCTCTAGTGATCTCATCAATTTGATTGTATCTGTTGAAGATACAGGTGACGGTATTCCTAGAGAATCTCAACCTCTCATCTTCACTCCATTCATGCAAGTAGGTTCGTCGATCTCCCGAAAACATGGAGGAACTGGTATTGGACTAAGCATTAGCAAGTGTTTGGTTGGCCTCATGAATGGCGAAATTGGATTTGCAAGTGAACCAAAAACTGGTTCCACTTTTACTTTTACTGCTGTCTTCGCCAATGGACTCCTCAGTTCTAATGAGTGTAAAATACGGCAAATCAACGACCAAACAAAACCTGCATATTCAGAATTTGAGGGTATGAATGCATTGGTTATTGATCCAAGACCTATTAGAGCAAAAGTGTCTCAATATCACATCCAACGCCTTGGCATTCACGTTGAAACGGTTTCAGATTTGAACCAAGGGGTGTCAACCATAAACAAAGGGAATGCAGTTATCAACATGGTCTTGATTGAGCAGGAAGTTTGGTATAGAGATTCAAGCATGTCGTCTCATTTTTTCGATAGCACAAGGAAAATCAGCCACGGTTTTCCTCCAAAGTTGTTCATTCTTGTTAATTCTAGCAACTCTTCTAAAACTAGCAGTGTAACGTCAGATGTTGATAATCCTACTATCATCACAAAACCACTCAGGGCAAGCATGCTTGCTGCGTCACTACAGCGAGAGATGAATGTTAGGAACAAGAGAACTCTAAATAGGGACCTTCAAAATTTGTCTCTTAGCCATCTTCTTGTTGGGAGGAAAATTCTAATTGTTGATGATAATGGCGTGAATCGTGCAGTAGCAGCTGGTGCTTTGAAAAAGTATGGAGCAGATGTGGTTTGTGTTAGCAGTGGAAAAGATGCTATCTCATCGCTGAAGCCACCTCATCAGTTCGACGCATGTTTCATGGATATTCAAATGCCAGAAATGGATGGTTTTGAAGCTACAGGTAGAATCAGAGAGATGGAACAGAATGTAAACACAGAAGTATCTATAAACTGGCATGTGCCGATTTTAGCGATGACTGCAGATGTAATTCAGGCTACACATGAGAAATGCCTAAGGTGTGGAATGGATGGGTATGTTTCAAAACCATTTGAAGCCGAACAACTTTATCGGGAAGTTTCTCGGTTTTTCCTGTCATCTTGA
Protein sequence

>Msa1443180

MWLKWWEKILGNGYKINQQYCQYIGSKRVKRELWRKLLLTWVLGWTVVSLWIFCFMSLQATEKRKETLASMCDERARIVQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFASYTERTAFERPLTSGVAYAVRVLHYEREQFEKQQGWIIKRMDTLEQNPVHKNDYAVEELEPSPLQEEYAPVIFAQDTISHVISVDMLSGKEDRDNVLRARESGKGVLTAPFRLLKSNRLGVILTFAVYKRYLPSNATPNERIQATNGYLGGVFDVESLVEKLLEQLASKQSVIVNVYDTTNHTHPIAMYGSNISGDVFNHVSTLNFGDPFRKHEMHCRFKQKPPLPCAAILTSIGILVIALLVGHIFYATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMHMLMDTDLDVTQQEYVRTAQESGKALVSLINEVLDQAKIEFGKLELEAVLFDIRSILDDVLSLFSDKSQGKGVELAAYVSDQVPKLLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEIVHSIEVDNESNPENTLSGFPVVKSCLSWKGFKAFSQDGPLGSFSSISSDLINLIVSVEDTGDGIPRESQPLIFTPFMQVGSSISRKHGGTGIGLSISKCLVGLMNGEIGFASEPKTGSTFTFTAVFANGLLSSNECKIRQINDQTKPAYSEFEGMNALVIDPRPIRAKVSQYHIQRLGIHVETVSDLNQGVSTINKGNAVINMVLIEQEVWYRDSSMSSHFFDSTRKISHGFPPKLFILVNSSNSSKTSSVTSDVDNPTIITKPLRASMLAASLQREMNVRNKRTLNRDLQNLSLSHLLVGRKILIVDDNGVNRAVAAGALKKYGADVVCVSSGKDAISSLKPPHQFDACFMDIQMPEMDGFEATGRIREMEQNVNTEVSINWHVPILAMTADVIQATHEKCLRCGMDGYVSKPFEAEQLYREVSRFFLSS*