Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0830660 | XP_003610915.2 | 84.928 | 345 | 4 | 2 | 1 | 297 | 1 | 345 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0830660 | sp|Q8BVQ5|PPME1_MOUSE | 37.240 | 384 | 138 | 9 | 3 | 288 | 7 | 385 | 2.55e-70 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0830660 | G7K7W8 | 84.928 | 345 | 4 | 2 | 1 | 297 | 1 | 345 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017730 | Msa0830660 | 0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0020390 | Msa0830660 | 0.800686 | 1.282741e-48 | -8.615850e-47 |
| Msa0024400 | Msa0830660 | 0.831357 | 1.747202e-55 | -8.615850e-47 |
| Msa0036540 | Msa0830660 | 0.817731 | 2.831784e-52 | -8.615850e-47 |
| Msa0072720 | Msa0830660 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
| Msa0093850 | Msa0830660 | 0.828637 | 8.048056e-55 | -8.615850e-47 |
| Msa0106620 | Msa0830660 | 0.840127 | 1.048362e-57 | -8.615850e-47 |
| Msa0106710 | Msa0830660 | 0.828757 | 7.529434e-55 | -8.615850e-47 |
| Msa0108410 | Msa0830660 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0616450 | Msa0830660 | 0.812688 | 3.737825e-51 | -8.615850e-47 |
| Msa0628420 | Msa0830660 | 0.822558 | 2.221909e-53 | -8.615850e-47 |
| Msa0629240 | Msa0830660 | 0.813741 | 2.195775e-51 | -8.615850e-47 |
| Msa0630770 | Msa0830660 | -0.813910 | 2.014775e-51 | -8.615850e-47 |
| Msa0642970 | Msa0830660 | 0.827546 | 1.473564e-54 | -8.615850e-47 |
| Msa0644030 | Msa0830660 | 0.813303 | 2.740303e-51 | -8.615850e-47 |
| Msa0647430 | Msa0830660 | 0.813492 | 2.490479e-51 | -8.615850e-47 |
| Msa0652690 | Msa0830660 | 0.807152 | 5.811797e-50 | -8.615850e-47 |
| Msa0655920 | Msa0830660 | 0.819490 | 1.129829e-52 | -8.615850e-47 |
| Msa0672550 | Msa0830660 | 0.817049 | 4.034165e-52 | -8.615850e-47 |
| Msa0677530 | Msa0830660 | 0.833670 | 4.667026e-56 | -8.615850e-47 |
| Msa0689440 | Msa0830660 | 0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0690310 | Msa0830660 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
| Msa0693330 | Msa0830660 | 0.862234 | 5.854772e-64 | -8.615850e-47 |
| Msa0702720 | Msa0830660 | 0.831553 | 1.564178e-55 | -8.615850e-47 |
| Msa0703440 | Msa0830660 | 0.801104 | 1.053873e-48 | -8.615850e-47 |
| Msa0703800 | Msa0830660 | 0.810323 | 1.220722e-50 | -8.615850e-47 |
| Msa0705390 | Msa0830660 | 0.809102 | 2.234029e-50 | -8.615850e-47 |
| Msa0709120 | Msa0830660 | 0.810785 | 9.696134e-51 | -8.615850e-47 |
| Msa0711650 | Msa0830660 | 0.833990 | 3.882467e-56 | -8.615850e-47 |
| Msa0738240 | Msa0830660 | 0.823874 | 1.094714e-53 | -8.615850e-47 |
| Msa0741440 | Msa0830660 | 0.813364 | 2.657778e-51 | -8.615850e-47 |
| Msa0743930 | Msa0830660 | 0.802024 | 6.824660e-49 | -8.615850e-47 |
| Msa0746210 | Msa0830660 | 0.807333 | 5.319678e-50 | -8.615850e-47 |
| Msa0752450 | Msa0830660 | 0.811257 | 7.665642e-51 | -8.615850e-47 |
| Msa0755330 | Msa0830660 | 0.823893 | 1.083868e-53 | -8.615850e-47 |
| Msa0780930 | Msa0830660 | 0.822889 | 1.860530e-53 | -8.615850e-47 |
| Msa0784480 | Msa0830660 | 0.827519 | 1.495706e-54 | -8.615850e-47 |
| Msa0786750 | Msa0830660 | 0.837281 | 5.703070e-57 | -8.615850e-47 |
| Msa0794970 | Msa0830660 | 0.818060 | 2.386817e-52 | -8.615850e-47 |
| Msa0800370 | Msa0830660 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa0811520 | Msa0830660 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0816130 | Msa0830660 | 0.808920 | 2.442955e-50 | -8.615850e-47 |
| Msa0822500 | Msa0830660 | 0.845199 | 4.713589e-59 | -8.615850e-47 |
| Msa0830660 | Msa0831100 | 0.821686 | 3.538334e-53 | -8.615850e-47 |
| Msa0830660 | Msa0833530 | 0.827943 | 1.183140e-54 | -8.615850e-47 |
| Msa0830660 | Msa0840060 | 0.846709 | 1.831865e-59 | -8.615850e-47 |
| Msa0830660 | Msa0851730 | 0.806924 | 6.494575e-50 | -8.615850e-47 |
| Msa0830660 | Msa0855110 | 0.815988 | 6.970238e-52 | -8.615850e-47 |
| Msa0830660 | Msa0855870 | 0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa0830660 | Msa0892640 | 0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0830660 | Msa0903780 | 0.837826 | 4.132469e-57 | -8.615850e-47 |
| Msa0830660 | Msa0933760 | 0.808958 | 2.398304e-50 | -8.615850e-47 |
| Msa0830660 | Msa0934140 | 0.837346 | 5.486726e-57 | -8.615850e-47 |
| Msa0830660 | Msa0944200 | 0.835559 | 1.563839e-56 | -8.615850e-47 |
| Msa0830660 | Msa0945240 | 0.809084 | 2.253258e-50 | -8.615850e-47 |
| Msa0830660 | Msa0958000 | 0.820410 | 6.960293e-53 | -8.615850e-47 |
| Msa0830660 | Msa0959520 | 0.800921 | 1.148451e-48 | -8.615850e-47 |
| Msa0830660 | Msa0971650 | 0.811246 | 7.704493e-51 | -8.615850e-47 |
| Msa0830660 | Msa0974950 | 0.813848 | 2.078872e-51 | -8.615850e-47 |
| Msa0830660 | Msa0980540 | 0.822637 | 2.129485e-53 | -8.615850e-47 |
| Msa0830660 | Msa0995370 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0830660 | Msa1002960 | 0.823327 | 1.470227e-53 | -8.615850e-47 |
| Msa0830660 | Msa1034500 | 0.829325 | 5.484290e-55 | -8.615850e-47 |
| Msa0830660 | Msa1037520 | 0.808481 | 3.032800e-50 | -8.615850e-47 |
| Msa0830660 | Msa1071050 | 0.825380 | 4.837166e-54 | -8.615850e-47 |
| Msa0830660 | Msa1089450 | 0.847437 | 1.157182e-59 | -8.615850e-47 |
| Msa0830660 | Msa1118450 | 0.802564 | 5.285053e-49 | -8.615850e-47 |
| Msa0830660 | Msa1123350 | 0.850113 | 2.094145e-60 | -8.615850e-47 |
| Msa0830660 | Msa1126830 | 0.804462 | 2.135675e-49 | -8.615850e-47 |
| Msa0830660 | Msa1127590 | 0.814025 | 1.900876e-51 | -8.615850e-47 |
| Msa0830660 | Msa1128270 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0830660 | Msa1163730 | 0.808046 | 3.754790e-50 | -8.615850e-47 |
| Msa0830660 | Msa1165270 | 0.802056 | 6.722901e-49 | -8.615850e-47 |
| Msa0830660 | Msa1165780 | 0.808348 | 3.236350e-50 | -8.615850e-47 |
| Msa0830660 | Msa1174780 | 0.800076 | 1.707373e-48 | -8.615850e-47 |
| Msa0830660 | Msa1178580 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0830660 | Msa1206650 | 0.831769 | 1.383204e-55 | -8.615850e-47 |
| Msa0830660 | Msa1209440 | 0.825696 | 4.071968e-54 | -8.615850e-47 |
| Msa0830660 | Msa1211230 | -0.802731 | 4.880817e-49 | -8.615850e-47 |
| Msa0830660 | Msa1211420 | -0.801496 | 8.762003e-49 | -8.615850e-47 |
| Msa0830660 | Msa1219000 | 0.807060 | 6.077387e-50 | -8.615850e-47 |
| Msa0830660 | Msa1225860 | -0.821667 | 3.574100e-53 | -8.615850e-47 |
| Msa0830660 | Msa1228040 | 0.854801 | 9.662728e-62 | -8.615850e-47 |
| Msa0830660 | Msa1233850 | 0.805270 | 1.447367e-49 | -8.615850e-47 |
| Msa0830660 | Msa1234620 | 0.805296 | 1.429889e-49 | -8.615850e-47 |
| Msa0830660 | Msa1262890 | 0.809080 | 2.257744e-50 | -8.615850e-47 |
| Msa0830660 | Msa1265590 | 0.820473 | 6.732547e-53 | -8.615850e-47 |
| Msa0830660 | Msa1271130 | 0.828297 | 9.722705e-55 | -8.615850e-47 |
| Msa0830660 | Msa1276150 | 0.803100 | 4.094927e-49 | -8.615850e-47 |
| Msa0830660 | Msa1276970 | 0.811327 | 7.400203e-51 | -8.615850e-47 |
| Msa0830660 | Msa1292020 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
| Msa0830660 | Msa1298100 | 0.817922 | 2.565233e-52 | -8.615850e-47 |
| Msa0830660 | Msa1307180 | 0.818876 | 1.558998e-52 | -8.615850e-47 |
| Msa0830660 | Msa1308220 | 0.821599 | 3.705844e-53 | -8.615850e-47 |
| Msa0830660 | Msa1325410 | -0.821913 | 3.135760e-53 | -8.615850e-47 |
| Msa0830660 | Msa1327640 | 0.813587 | 2.374145e-51 | -8.615850e-47 |
| Msa0830660 | Msa1331050 | -0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa0830660 | Msa1340200 | 0.814536 | 1.465774e-51 | -8.615850e-47 |
| Msa0830660 | Msa1341300 | 0.800335 | 1.512871e-48 | -8.615850e-47 |
| Msa0830660 | Msa1341840 | 0.804574 | 2.023765e-49 | -8.615850e-47 |
| Msa0830660 | Msa1351540 | 0.807212 | 5.643989e-50 | -8.615850e-47 |
| Msa0830660 | Msa1369690 | 0.842529 | 2.446270e-58 | -8.615850e-47 |
| Msa0830660 | Msa1371520 | 0.804152 | 2.477800e-49 | -8.615850e-47 |
| Msa0830660 | Msa1373820 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa0830660 | Msa1393820 | 0.813512 | 2.465198e-51 | -8.615850e-47 |
| Msa0830660 | Msa1395730 | 0.820551 | 6.460347e-53 | -8.615850e-47 |
| Msa0830660 | Msa1407190 | 0.805396 | 1.362287e-49 | -8.615850e-47 |
| Msa0830660 | Msa1407750 | 0.810389 | 1.180790e-50 | -8.615850e-47 |
| Msa0830660 | Msa1411950 | 0.831218 | 1.891124e-55 | -8.615850e-47 |
| Msa0830660 | Msa1414820 | 0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0830660 | Msa1418240 | 0.835753 | 1.396669e-56 | -8.615850e-47 |
| Msa0830660 | Msa1432130 | 0.813013 | 3.172228e-51 | -8.615850e-47 |
| Msa0830660 | Msa1434090 | 0.800886 | 1.167657e-48 | -8.615850e-47 |
| Msa0830660 | Msa1434740 | 0.827022 | 1.967652e-54 | -8.615850e-47 |
| Msa0830660 | Msa1440310 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa0830660 | Msa1443180 | 0.805190 | 1.504725e-49 | -8.615850e-47 |
| Msa0830660 | Msa1450720 | 0.818845 | 1.584890e-52 | -8.615850e-47 |
| Msa0830660 | Msa1458090 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0830660 | Msa1464090 | 0.800332 | 1.514926e-48 | -8.615850e-47 |
| Msa0138360 | Msa0830660 | 0.821359 | 4.211504e-53 | -8.615850e-47 |
| Msa0139670 | Msa0830660 | 0.811443 | 6.983706e-51 | -8.615850e-47 |
| Msa0147980 | Msa0830660 | 0.819668 | 1.028967e-52 | -8.615850e-47 |
| Msa0149440 | Msa0830660 | 0.801862 | 7.369064e-49 | -8.615850e-47 |
| Msa0163510 | Msa0830660 | 0.826202 | 3.086655e-54 | -8.615850e-47 |
| Msa0173800 | Msa0830660 | 0.838535 | 2.714482e-57 | -8.615850e-47 |
| Msa0177960 | Msa0830660 | 0.801809 | 7.555695e-49 | -8.615850e-47 |
| Msa0183870 | Msa0830660 | 0.805406 | 1.355433e-49 | -8.615850e-47 |
| Msa0188350 | Msa0830660 | 0.805886 | 1.075062e-49 | -8.615850e-47 |
| Msa0189040 | Msa0830660 | 0.818336 | 2.067326e-52 | -8.615850e-47 |
| Msa0199940 | Msa0830660 | 0.850161 | 2.030483e-60 | -8.615850e-47 |
| Msa0202410 | Msa0830660 | 0.824317 | 8.617700e-54 | -8.615850e-47 |
| Msa0202490 | Msa0830660 | 0.815471 | 9.091122e-52 | -8.615850e-47 |
| Msa0204960 | Msa0830660 | 0.822605 | 2.165698e-53 | -8.615850e-47 |
| Msa0209140 | Msa0830660 | 0.835725 | 1.419369e-56 | -8.615850e-47 |
| Msa0217670 | Msa0830660 | 0.826181 | 3.123072e-54 | -8.615850e-47 |
| Msa0237210 | Msa0830660 | 0.829689 | 4.473549e-55 | -8.615850e-47 |
| Msa0378970 | Msa0830660 | 0.831224 | 1.884396e-55 | -8.615850e-47 |
| Msa0382370 | Msa0830660 | 0.854708 | 1.028291e-61 | -8.615850e-47 |
| Msa0385500 | Msa0830660 | 0.846204 | 2.515615e-59 | -8.615850e-47 |
| Msa0395980 | Msa0830660 | 0.814303 | 1.650076e-51 | -8.615850e-47 |
| Msa0419720 | Msa0830660 | 0.810205 | 1.294108e-50 | -8.615850e-47 |
| Msa0423550 | Msa0830660 | 0.826997 | 1.994897e-54 | -8.615850e-47 |
| Msa0428580 | Msa0830660 | 0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0432160 | Msa0830660 | 0.839551 | 1.480527e-57 | -8.615850e-47 |
| Msa0437020 | Msa0830660 | 0.803415 | 3.524207e-49 | -8.615850e-47 |
| Msa0440510 | Msa0830660 | 0.813424 | 2.577709e-51 | -8.615850e-47 |
| Msa0450400 | Msa0830660 | -0.856970 | 2.244089e-62 | -8.615850e-47 |
| Msa0459100 | Msa0830660 | 0.811925 | 5.486387e-51 | -8.615850e-47 |
| Msa0468250 | Msa0830660 | 0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa0474940 | Msa0830660 | 0.806391 | 8.414705e-50 | -8.615850e-47 |
| Msa0476680 | Msa0830660 | 0.845976 | 2.901816e-59 | -8.615850e-47 |
| Msa0480780 | Msa0830660 | 0.807188 | 5.709201e-50 | -8.615850e-47 |
| Msa0481970 | Msa0830660 | 0.828451 | 8.923528e-55 | -8.615850e-47 |
| Msa0240900 | Msa0830660 | 0.836509 | 8.978152e-57 | -8.615850e-47 |
| Msa0241140 | Msa0830660 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
| Msa0241830 | Msa0830660 | 0.861093 | 1.306660e-63 | -8.615850e-47 |
| Msa0244970 | Msa0830660 | 0.813561 | 2.404632e-51 | -8.615850e-47 |
| Msa0244980 | Msa0830660 | 0.812429 | 4.258586e-51 | -8.615850e-47 |
| Msa0245430 | Msa0830660 | 0.801664 | 8.090939e-49 | -8.615850e-47 |
| Msa0245580 | Msa0830660 | 0.828656 | 7.963882e-55 | -8.615850e-47 |
| Msa0249580 | Msa0830660 | 0.807892 | 4.047906e-50 | -8.615850e-47 |
| Msa0257490 | Msa0830660 | 0.865537 | 5.497571e-65 | -8.615850e-47 |
| Msa0261170 | Msa0830660 | 0.827359 | 1.634475e-54 | -8.615850e-47 |
| Msa0274980 | Msa0830660 | 0.833987 | 3.888108e-56 | -8.615850e-47 |
| Msa0278570 | Msa0830660 | 0.849912 | 2.384679e-60 | -8.615850e-47 |
| Msa0279850 | Msa0830660 | 0.824595 | 7.411386e-54 | -8.615850e-47 |
| Msa0281530 | Msa0830660 | 0.857076 | 2.088542e-62 | -8.615850e-47 |
| Msa0284180 | Msa0830660 | 0.818409 | 1.990043e-52 | -8.615850e-47 |
| Msa0288620 | Msa0830660 | 0.811189 | 7.927521e-51 | -8.615850e-47 |
| Msa0296250 | Msa0830660 | 0.838141 | 3.430102e-57 | -8.615850e-47 |
| Msa0296790 | Msa0830660 | 0.853334 | 2.560019e-61 | -8.615850e-47 |
| Msa0300280 | Msa0830660 | 0.805277 | 1.442424e-49 | -8.615850e-47 |
| Msa0315690 | Msa0830660 | 0.836995 | 6.748524e-57 | -8.615850e-47 |
| Msa0317970 | Msa0830660 | 0.848505 | 5.873053e-60 | -8.615850e-47 |
| Msa0319920 | Msa0830660 | 0.824757 | 6.790699e-54 | -8.615850e-47 |
| Msa0320590 | Msa0830660 | 0.869509 | 2.936011e-66 | -8.615850e-47 |
| Msa0321690 | Msa0830660 | 0.828107 | 1.080492e-54 | -8.615850e-47 |
| Msa0322240 | Msa0830660 | 0.820024 | 8.535228e-53 | -8.615850e-47 |
| Msa0322900 | Msa0830660 | 0.836938 | 6.977233e-57 | -8.615850e-47 |
| Msa0323260 | Msa0830660 | 0.800615 | 1.326098e-48 | -8.615850e-47 |
| Msa0332640 | Msa0830660 | 0.804399 | 2.201205e-49 | -8.615850e-47 |
| Msa0339020 | Msa0830660 | 0.802243 | 6.154775e-49 | -8.615850e-47 |
| Msa0341690 | Msa0830660 | 0.823932 | 1.061407e-53 | -8.615850e-47 |
| Msa0357900 | Msa0830660 | 0.810910 | 9.111990e-51 | -8.615850e-47 |
| Msa0485240 | Msa0830660 | 0.827934 | 1.188933e-54 | -8.615850e-47 |
| Msa0491000 | Msa0830660 | 0.841283 | 5.218989e-58 | -8.615850e-47 |
| Msa0511440 | Msa0830660 | 0.820545 | 6.481889e-53 | -8.615850e-47 |
| Msa0511770 | Msa0830660 | 0.806760 | 7.034128e-50 | -8.615850e-47 |
| Msa0517640 | Msa0830660 | 0.814967 | 1.176531e-51 | -8.615850e-47 |
| Msa0518030 | Msa0830660 | 0.808836 | 2.546633e-50 | -8.615850e-47 |
| Msa0521010 | Msa0830660 | 0.843104 | 1.719782e-58 | -8.615850e-47 |
| Msa0524500 | Msa0830660 | 0.801770 | 7.696433e-49 | -8.615850e-47 |
| Msa0527190 | Msa0830660 | 0.806122 | 9.589914e-50 | -8.615850e-47 |
| Msa0531250 | Msa0830660 | 0.825841 | 3.761760e-54 | -8.615850e-47 |
| Msa0542290 | Msa0830660 | 0.806397 | 8.393035e-50 | -8.615850e-47 |
| Msa0547160 | Msa0830660 | 0.823482 | 1.352620e-53 | -8.615850e-47 |
| Msa0547990 | Msa0830660 | 0.818408 | 1.991351e-52 | -8.615850e-47 |
| Msa0581110 | Msa0830660 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0583360 | Msa0830660 | -0.825544 | 4.424667e-54 | -8.615850e-47 |
| Msa0588090 | Msa0830660 | 0.814128 | 1.803704e-51 | -8.615850e-47 |
| Msa0592270 | Msa0830660 | 0.803106 | 4.083278e-49 | -8.615850e-47 |
| Msa0593700 | Msa0830660 | 0.808702 | 2.719608e-50 | -8.615850e-47 |
| Msa0594050 | Msa0830660 | 0.800235 | 1.585086e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0830660 | MtrunA17_Chr5g0396141 | 84.928 | 345 | 4 | 2 | 1 | 297 | 1 | 345 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0830660 | AT4G10050.1 | 63.450 | 342 | 74 | 4 | 3 | 293 | 4 | 345 | 2.60e-152 | 430 |
| Msa0830660 | AT4G10050.2 | 71.875 | 256 | 45 | 1 | 65 | 293 | 18 | 273 | 4.01e-133 | 379 |
Find 107 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGAATGCTTACATATT+TGG | 0.159791 | 5_4:-3710257 | Msa0830660:three_prime_UTR |
| CGACTCCATTAGGGCCTATT+TGG | 0.179803 | 5_4:+3712535 | None:intergenic |
| GAAAGGCTTAATTTAATATT+AGG | 0.190859 | 5_4:-3710093 | Msa0830660:three_prime_UTR |
| CCAGCAGCAGTTGCCGTTCT+TGG | 0.199984 | 5_4:+3710324 | None:intergenic |
| AAACTAACATCATTTGTTTC+TGG | 0.230576 | 5_4:+3717606 | None:intergenic |
| TTAAAATAAATTGATCAAAT+AGG | 0.242716 | 5_4:-3718081 | Msa0830660:five_prime_UTR |
| GTTTATCCAACACCTGATTC+AGG | 0.254969 | 5_4:+3710346 | None:intergenic |
| ATATTAGGTTCTAGATTATA+AGG | 0.271713 | 5_4:-3710078 | Msa0830660:three_prime_UTR |
| TGATCGTCGGTGATGTCTTC+GGG | 0.285744 | 5_4:+3717840 | None:intergenic |
| TTTATTGCTCGTAACCAAAT+AGG | 0.289071 | 5_4:-3712549 | Msa0830660:CDS |
| GAAGAAGGTGGTTACTTAGT+TGG | 0.300333 | 5_4:+3717771 | None:intergenic |
| ACACACAGGGCATGCTATTC+AGG | 0.324713 | 5_4:-3712707 | Msa0830660:intron |
| GGTTTCGAAAAGGCAGGCTT+GGG | 0.333613 | 5_4:+3710368 | None:intergenic |
| ATACATACCACGACTCCATT+AGG | 0.334656 | 5_4:+3712525 | None:intergenic |
| TTCTAGATTATAAGGTATAA+TGG | 0.344955 | 5_4:-3710070 | Msa0830660:three_prime_UTR |
| ATGCTTACATATTTGGTAGA+TGG | 0.345199 | 5_4:-3710250 | Msa0830660:three_prime_UTR |
| TGATGTATTGGCTGTTATAA+AGG | 0.347563 | 5_4:-3716474 | Msa0830660:CDS |
| TTATTACCCACAATTAATTT+AGG | 0.359056 | 5_4:-3710182 | Msa0830660:three_prime_UTR |
| AAATCATTGTCAACCTTGGC+TGG | 0.369006 | 5_4:-3715372 | Msa0830660:CDS |
| CCAAGAACGGCAACTGCTGC+TGG | 0.379637 | 5_4:-3710324 | Msa0830660:three_prime_UTR |
| CTTTCATTTGCTGTGTCAAC+GGG | 0.387831 | 5_4:-3716691 | Msa0830660:CDS |
| CATAATAATGCTAGAACTAA+AGG | 0.397985 | 5_4:+3710274 | None:intergenic |
| TTGATCGTCGGTGATGTCTT+CGG | 0.402926 | 5_4:+3717839 | None:intergenic |
| TGGAAAAGACTGAACAATAT+TGG | 0.403174 | 5_4:-3714638 | Msa0830660:CDS |
| AATATGATGATTCGAAGAAA+TGG | 0.403489 | 5_4:-3714822 | Msa0830660:intron |
| AATAACAACAGCTTCGGAAC+AGG | 0.404928 | 5_4:+3713227 | None:intergenic |
| GCTGTTATAAAGGAATTATA+TGG | 0.414492 | 5_4:-3716464 | Msa0830660:CDS |
| CCGAAGCTGTTGTTATTAGC+AGG | 0.418860 | 5_4:-3713221 | Msa0830660:CDS |
| GTTATATTGTAGGAGTTCTT+CGG | 0.419029 | 5_4:-3717688 | Msa0830660:intron |
| CGTAACCAAATAGGCCCTAA+TGG | 0.420014 | 5_4:-3712540 | Msa0830660:CDS |
| GGGTTTCGAAAAGGCAGGCT+TGG | 0.436641 | 5_4:+3710367 | None:intergenic |
| AGAAATACGCACCGTTGGAT+TGG | 0.446308 | 5_4:-3717665 | Msa0830660:CDS |
| TGTAACAGGTCTCTCACAAT+TGG | 0.451447 | 5_4:-3712766 | Msa0830660:intron |
| TACATACCACGACTCCATTA+GGG | 0.451852 | 5_4:+3712526 | None:intergenic |
| ATTAGCAGGAACAGATAGAT+TGG | 0.456800 | 5_4:-3713207 | Msa0830660:CDS |
| CTGAACAATATTGGAAAGGC+TGG | 0.457718 | 5_4:-3714629 | Msa0830660:intron |
| CTTGGCTGGGTTGATTGTTG+TGG | 0.462285 | 5_4:-3715358 | Msa0830660:CDS |
| TGACCAACGAGGATAATTGC+TGG | 0.466211 | 5_4:+3716431 | None:intergenic |
| TTGAGGAGCAGAAGCGAAAA+CGG | 0.466304 | 5_4:+3717800 | None:intergenic |
| AAGGCAGGCTTGGGGAGGCC+AGG | 0.476762 | 5_4:+3710377 | None:intergenic |
| GTATAATTAAGGAGAAAGCT+AGG | 0.484847 | 5_4:-3716669 | Msa0830660:CDS |
| AAATACACAAAATTCTCTCT+AGG | 0.485579 | 5_4:+3718016 | None:intergenic |
| TTGCTTGTATGCAGATTGAA+TGG | 0.491842 | 5_4:-3714909 | Msa0830660:intron |
| GATTGTTGTGGATGTTGTAG+AGG | 0.492777 | 5_4:-3715346 | Msa0830660:intron |
| CGAAACCCTGAATCAGGTGT+TGG | 0.493079 | 5_4:-3710352 | Msa0830660:exon |
| TTTATCCAACACCTGATTCA+GGG | 0.495087 | 5_4:+3710347 | None:intergenic |
| ACAAGAGTTGCAAATTCATC+AGG | 0.495103 | 5_4:+3712579 | None:intergenic |
| AATTTAGGCATCTCATATCA+AGG | 0.496220 | 5_4:-3710167 | Msa0830660:three_prime_UTR |
| GCTTTCATTTGCTGTGTCAA+CGG | 0.504011 | 5_4:-3716692 | Msa0830660:CDS |
| GCGAAAACGGAAGCGGGTTG+TGG | 0.507851 | 5_4:+3717813 | None:intergenic |
| CCTGATTCAGGGTTTCGAAA+AGG | 0.508303 | 5_4:+3710358 | None:intergenic |
| ATCAAGGTACAATGGAAGAA+AGG | 0.509228 | 5_4:-3710110 | Msa0830660:three_prime_UTR |
| CAACTGCTGCTGGGTGATGA+TGG | 0.510069 | 5_4:-3710314 | Msa0830660:three_prime_UTR |
| GACCATGTGCAATGATGTAT+TGG | 0.512442 | 5_4:-3716486 | Msa0830660:CDS |
| TGAGATGCCTAAATTAATTG+TGG | 0.515806 | 5_4:+3710175 | None:intergenic |
| TGTGTCAACGGGTATAATTA+AGG | 0.520801 | 5_4:-3716680 | Msa0830660:CDS |
| GAGATGCCTAAATTAATTGT+GGG | 0.528948 | 5_4:+3710176 | None:intergenic |
| TTCGGAGAAATACGCACCGT+TGG | 0.529265 | 5_4:-3717670 | Msa0830660:CDS |
| ATTCAGGGTTTCGAAAAGGC+AGG | 0.532832 | 5_4:+3710362 | None:intergenic |
| TTATGTTTATCGAACAGAGC+TGG | 0.535307 | 5_4:-3714658 | Msa0830660:CDS |
| GCAGAAGCGAAAACGGAAGC+GGG | 0.536038 | 5_4:+3717807 | None:intergenic |
| CAATTATCCTCGTTGGTCAC+AGG | 0.536543 | 5_4:-3716427 | Msa0830660:intron |
| CCTCCAGCAATTATCCTCGT+TGG | 0.537076 | 5_4:-3716434 | Msa0830660:CDS |
| TTCATGTTGAAGTGGCGCAT+TGG | 0.540815 | 5_4:+3718050 | None:intergenic |
| CAAGAACGGCAACTGCTGCT+GGG | 0.543535 | 5_4:-3710323 | Msa0830660:three_prime_UTR |
| TCGAAAAGGCAGGCTTGGGG+AGG | 0.546492 | 5_4:+3710372 | None:intergenic |
| ACTATAATTTCATGTTGAAG+TGG | 0.548107 | 5_4:+3718042 | None:intergenic |
| TACTTAGTTGGAGGACGTTG+AGG | 0.548397 | 5_4:+3717783 | None:intergenic |
| CCTGCTAATAACAACAGCTT+CGG | 0.548805 | 5_4:+3713221 | None:intergenic |
| GAAAGCTAGGGTGGTTGCGA+TGG | 0.548883 | 5_4:-3716656 | Msa0830660:CDS |
| AGCAGAAGCGAAAACGGAAG+CGG | 0.551536 | 5_4:+3717806 | None:intergenic |
| ATGATAGTTGTCAGACACAC+AGG | 0.553607 | 5_4:-3712721 | Msa0830660:CDS |
| CTCACAATTGGTCAAATGCA+AGG | 0.555981 | 5_4:-3712754 | Msa0830660:CDS |
| GAAGGTGGTTACTTAGTTGG+AGG | 0.568541 | 5_4:+3717774 | None:intergenic |
| GCGATGGACTTGAGAGGTCA+TGG | 0.569848 | 5_4:-3716640 | Msa0830660:CDS |
| AAGGAAATCATTGTCAACCT+TGG | 0.570433 | 5_4:-3715376 | Msa0830660:CDS |
| AATCATTGTCAACCTTGGCT+GGG | 0.570477 | 5_4:-3715371 | Msa0830660:CDS |
| ATTGAATGGAGTGTGAGGGC+TGG | 0.573026 | 5_4:-3714895 | Msa0830660:CDS |
| TTTGTTTGAATCGATCTATG+AGG | 0.575527 | 5_4:+3717895 | None:intergenic |
| TATAATTAAGGAGAAAGCTA+GGG | 0.580788 | 5_4:-3716668 | Msa0830660:CDS |
| AAAACGGAAGCGGGTTGTGG+TGG | 0.588511 | 5_4:+3717816 | None:intergenic |
| AAGACTGAACAATATTGGAA+AGG | 0.599196 | 5_4:-3714633 | Msa0830660:CDS |
| AATTAAGGAGAAAGCTAGGG+TGG | 0.599249 | 5_4:-3716665 | Msa0830660:CDS |
| CATCTCATATCAAGGTACAA+TGG | 0.599868 | 5_4:-3710159 | Msa0830660:three_prime_UTR |
| TCGATTCAAACAAAACGCAA+TGG | 0.601273 | 5_4:-3717886 | Msa0830660:exon |
| GGTGTTGGATAAACCAAGAA+CGG | 0.608439 | 5_4:-3710337 | Msa0830660:three_prime_UTR |
| CAGGAACAGATAGATTGGAC+AGG | 0.610230 | 5_4:-3713202 | Msa0830660:intron |
| CACAACAATCAACCCAGCCA+AGG | 0.611749 | 5_4:+3715359 | None:intergenic |
| ATAACAACAGCTTCGGAACA+GGG | 0.614518 | 5_4:+3713228 | None:intergenic |
| GTTTGAATCGATCTATGAGG+AGG | 0.615102 | 5_4:+3717898 | None:intergenic |
| ATCCATCATCAAAGCATGGG+GGG | 0.618423 | 5_4:-3715423 | Msa0830660:intron |
| TCCATCATCAAAGCATGGGG+GGG | 0.626873 | 5_4:-3715422 | Msa0830660:intron |
| GTTTCGAAAAGGCAGGCTTG+GGG | 0.636712 | 5_4:+3710369 | None:intergenic |
| TAACAACAGCTTCGGAACAG+GGG | 0.644743 | 5_4:+3713229 | None:intergenic |
| GATCGTCGGTGATGTCTTCG+GGG | 0.656076 | 5_4:+3717841 | None:intergenic |
| GGGTTGTGGTGGTTGATCGT+CGG | 0.667260 | 5_4:+3717827 | None:intergenic |
| AATAGGCCCTAATGGAGTCG+TGG | 0.668041 | 5_4:-3712532 | Msa0830660:intron |
| TGCAGATTGAATGGAGTGTG+AGG | 0.671060 | 5_4:-3714900 | Msa0830660:intron |
| TGATAGTTGTCAGACACACA+GGG | 0.673323 | 5_4:-3712720 | Msa0830660:CDS |
| AGCCAATACATCATTGCACA+TGG | 0.678025 | 5_4:+3716484 | None:intergenic |
| GTGGTTGCGATGGACTTGAG+AGG | 0.687131 | 5_4:-3716646 | Msa0830660:CDS |
| AAATACACAGACCAATCCAA+CGG | 0.692479 | 5_4:+3717654 | None:intergenic |
| TTGCTGTGCATATTGCTGCA+AGG | 0.693525 | 5_4:-3715395 | Msa0830660:CDS |
| TATCCATCATCAAAGCATGG+GGG | 0.700379 | 5_4:-3715424 | Msa0830660:intron |
| GCAGATTGAATGGAGTGTGA+GGG | 0.705258 | 5_4:-3714899 | Msa0830660:intron |
| CCAACGAGGATAATTGCTGG+AGG | 0.728227 | 5_4:+3716434 | None:intergenic |
| TAAATCACCTGTGACCAACG+AGG | 0.765150 | 5_4:+3716420 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATAAATTGATCAAAT+AGG | - | chr5_4:3710002-3710021 | Msa0830660:three_prime_UTR | 10.0% |
| !!! | TTATTTTACTTATTATATTC+AGG | - | chr5_4:3710566-3710585 | Msa0830660:intron | 10.0% |
| !!! | TATTTTTTTTTTTTTTTGAG+AGG | - | chr5_4:3713856-3713875 | Msa0830660:intron | 10.0% |
| !!! | TCTATTATACTTTTTTTTTA+GGG | + | chr5_4:3713971-3713990 | None:intergenic | 10.0% |
| !!! | TTCTATTATACTTTTTTTTT+AGG | + | chr5_4:3713972-3713991 | None:intergenic | 10.0% |
| !!! | AAATTTAAGTATTTTATCAT+TGG | - | chr5_4:3714772-3714791 | Msa0830660:intron | 10.0% |
| !!! | CTAATTTTTGTTTTTTTTAT+TGG | - | chr5_4:3715285-3715304 | Msa0830660:intron | 10.0% |
| !!! | TTTTTAATTATAACAAACTT+AGG | - | chr5_4:3718061-3718080 | Msa0830660:five_prime_UTR | 10.0% |
| !!! | TTTTAATTATAACAAACTTA+GGG | - | chr5_4:3718062-3718081 | Msa0830660:five_prime_UTR | 10.0% |
| !!! | AGAATTTTGTGTATTTTAAA+AGG | - | chr5_4:3710074-3710093 | Msa0830660:three_prime_UTR | 15.0% |
| !!! | TTTTTCATTTGTTATATTGT+AGG | - | chr5_4:3710385-3710404 | Msa0830660:intron | 15.0% |
| !!! | AATAGTCATAATATTGATTT+TGG | + | chr5_4:3710507-3710526 | None:intergenic | 15.0% |
| !! | ATATTTAAAGATAAGAATGA+AGG | - | chr5_4:3710974-3710993 | Msa0830660:intron | 15.0% |
| !! | TGATTAATTATTTACCTATT+CGG | + | chr5_4:3711062-3711081 | None:intergenic | 15.0% |
| !! | TGTAATAACTAAAAATCAAA+TGG | + | chr5_4:3711237-3711256 | None:intergenic | 15.0% |
| !! | AACATATATTATGTTTAATG+TGG | - | chr5_4:3712412-3712431 | Msa0830660:intron | 15.0% |
| !! | TTTATTCCTATAGAAATATT+TGG | - | chr5_4:3712547-3712566 | Msa0830660:CDS | 15.0% |
| !! | TAGTTAGATATTTAAGAAAA+AGG | - | chr5_4:3713054-3713073 | Msa0830660:intron | 15.0% |
| !!! | CTTTTGACATTATTATTATT+AGG | - | chr5_4:3713533-3713552 | Msa0830660:intron | 15.0% |
| !! | AATCGTATGATATAATAATA+AGG | + | chr5_4:3713811-3713830 | None:intergenic | 15.0% |
| !! | TATTATTATATCATACGATT+AGG | - | chr5_4:3713811-3713830 | Msa0830660:intron | 15.0% |
| !!! | CCTTATTTATACTTTATTAA+AGG | + | chr5_4:3714297-3714316 | None:intergenic | 15.0% |
| !! | CCTTTAATAAAGTATAAATA+AGG | - | chr5_4:3714294-3714313 | Msa0830660:intron | 15.0% |
| !! | ATAAATATGAAAATGTTTGA+TGG | + | chr5_4:3714652-3714671 | None:intergenic | 15.0% |
| !!! | TATTTATTCTTTTTATCATG+TGG | - | chr5_4:3714665-3714684 | Msa0830660:intron | 15.0% |
| !!! | ACATTATATATTTTTCATAC+AGG | - | chr5_4:3714800-3714819 | Msa0830660:intron | 15.0% |
| !! | CTATATTTAGTTAAAAATAG+TGG | - | chr5_4:3715652-3715671 | Msa0830660:intron | 15.0% |
| !!! | ATCTAAACATTTTTTTTACT+AGG | - | chr5_4:3716795-3716814 | Msa0830660:intron | 15.0% |
| !! | TGATAAGAAAAACAAAAAAT+TGG | + | chr5_4:3717957-3717976 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTTTTTCTTATCA+AGG | - | chr5_4:3717957-3717976 | Msa0830660:five_prime_UTR | 15.0% |
| !!! | GCTAATGCATTTTTAATTAA+TGG | - | chr5_4:3710663-3710682 | Msa0830660:intron | 20.0% |
| !! | AATCAATTATAACTGTGATA+TGG | - | chr5_4:3710733-3710752 | Msa0830660:intron | 20.0% |
| !! | ATAAACAATGTAGTTTACTT+AGG | + | chr5_4:3711527-3711546 | None:intergenic | 20.0% |
| !!! | TTATCTTATTTTATTGTCTC+CGG | - | chr5_4:3711698-3711717 | Msa0830660:intron | 20.0% |
| !! | ATTATATCATCATCTAATCA+AGG | + | chr5_4:3711855-3711874 | None:intergenic | 20.0% |
| !!! | AAAAATTTGGTGTCTTTATT+TGG | - | chr5_4:3711895-3711914 | Msa0830660:intron | 20.0% |
| !!! | AAGGAAATTTAATTTTGTTC+TGG | - | chr5_4:3712078-3712097 | Msa0830660:intron | 20.0% |
| !! | AAAGTAAAAGGGAAAAATAA+AGG | + | chr5_4:3712512-3712531 | None:intergenic | 20.0% |
| !! | ATTGAAGAAAGAAAGTAAAA+GGG | + | chr5_4:3712523-3712542 | None:intergenic | 20.0% |
| !!! | ATTTTCTTGACATTTTTTTG+TGG | - | chr5_4:3713030-3713049 | Msa0830660:intron | 20.0% |
| !!! | AAATTGCATTTTTTGTGTTA+GGG | + | chr5_4:3713609-3713628 | None:intergenic | 20.0% |
| !!! | AAAATTGCATTTTTTGTGTT+AGG | + | chr5_4:3713610-3713629 | None:intergenic | 20.0% |
| !!! | AACTTTTTTGTAAAGATAAG+GGG | + | chr5_4:3713676-3713695 | None:intergenic | 20.0% |
| !!! | CAACTTTTTTGTAAAGATAA+GGG | + | chr5_4:3713677-3713696 | None:intergenic | 20.0% |
| !!! | TTAGGATATGTTGAATATTT+TGG | - | chr5_4:3713829-3713848 | Msa0830660:intron | 20.0% |
| !!! | TTTTTTGATGAACCAAAATA+AGG | - | chr5_4:3714329-3714348 | Msa0830660:intron | 20.0% |
| !! | GCATTCATTATATTGTATTA+TGG | - | chr5_4:3715423-3715442 | Msa0830660:intron | 20.0% |
| !! | TATTCTGTCCTAATATATTT+AGG | - | chr5_4:3715473-3715492 | Msa0830660:intron | 20.0% |
| !! | TACATCTTCCTAAATATATT+AGG | + | chr5_4:3715484-3715503 | None:intergenic | 20.0% |
| !!! | TTTTTTCAATTAAGATGACA+TGG | - | chr5_4:3715835-3715854 | Msa0830660:intron | 20.0% |
| !!! | TTTTTCAATTAAGATGACAT+GGG | - | chr5_4:3715836-3715855 | Msa0830660:intron | 20.0% |
| !!! | TAAAAAGTATCCATATAGAA+TGG | + | chr5_4:3716077-3716096 | None:intergenic | 20.0% |
| !! | TAATCTTAAGCATTTCAATT+TGG | - | chr5_4:3716102-3716121 | Msa0830660:intron | 20.0% |
| !!! | TAAAAAGTATCCATATAGAA+TGG | + | chr5_4:3716077-3716096 | None:intergenic | 20.0% |
| !! | TAATCTTAAGCATTTCAATT+TGG | - | chr5_4:3716102-3716121 | Msa0830660:intron | 20.0% |
| !! | AAACAAACAAACATATATGT+GGG | - | chr5_4:3716465-3716484 | Msa0830660:CDS | 20.0% |
| !!! | AAAATGTTTAGATTTTTGCT+GGG | + | chr5_4:3716788-3716807 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTAGATTTTTGC+TGG | + | chr5_4:3716789-3716808 | None:intergenic | 20.0% |
| !!! | TAAACATTTTTTTTACTAGG+TGG | - | chr5_4:3716798-3716817 | Msa0830660:intron | 20.0% |
| !!! | TAACTTATGATAAGATTTTG+AGG | + | chr5_4:3716849-3716868 | None:intergenic | 20.0% |
| !! | CAAATACAAAAATATTGTGT+TGG | + | chr5_4:3717455-3717474 | None:intergenic | 20.0% |
| !! | TCTATCTAAATTAATCAACA+TGG | + | chr5_4:3717541-3717560 | None:intergenic | 20.0% |
| !!! | AATTTGATTTTCACATTACT+TGG | - | chr5_4:3717639-3717658 | Msa0830660:CDS | 20.0% |
| !! | ATTATGAATGCTTACATATT+TGG | - | chr5_4:3717826-3717845 | Msa0830660:CDS | 20.0% |
| !! | TTATTACCCACAATTAATTT+AGG | - | chr5_4:3717901-3717920 | Msa0830660:five_prime_UTR | 20.0% |
| !! | GAAAGGCTTAATTTAATATT+AGG | - | chr5_4:3717990-3718009 | Msa0830660:five_prime_UTR | 20.0% |
| !!! | ATATTAGGTTCTAGATTATA+AGG | - | chr5_4:3718005-3718024 | Msa0830660:five_prime_UTR | 20.0% |
| !! | TTCTAGATTATAAGGTATAA+TGG | - | chr5_4:3718013-3718032 | Msa0830660:five_prime_UTR | 20.0% |
| !!! | TATAAGGTATAATGGAAAAA+AGG | - | chr5_4:3718021-3718040 | Msa0830660:five_prime_UTR | 20.0% |
| ! | ACTATAATTTCATGTTGAAG+TGG | + | chr5_4:3710044-3710063 | None:intergenic | 25.0% |
| ! | AAATACACAAAATTCTCTCT+AGG | + | chr5_4:3710070-3710089 | None:intergenic | 25.0% |
| ! | AAACTAACATCATTTGTTTC+TGG | + | chr5_4:3710480-3710499 | None:intergenic | 25.0% |
| ! | CTAAAAATCAAATGGCAATT+TGG | + | chr5_4:3711229-3711248 | None:intergenic | 25.0% |
| ! | TATAATTAAGGAGAAAGCTA+GGG | - | chr5_4:3711415-3711434 | Msa0830660:intron | 25.0% |
| ! | GCTGTTATAAAGGAATTATA+TGG | - | chr5_4:3711619-3711638 | Msa0830660:intron | 25.0% |
| ! | TTGGTCACTTAAAGTAAAAT+TGG | - | chr5_4:3711778-3711797 | Msa0830660:intron | 25.0% |
| ! | TGATGATATAATACAACTCT+TGG | - | chr5_4:3711863-3711882 | Msa0830660:intron | 25.0% |
| !! | TCTTTATTTGGTAGAATTGA+AGG | - | chr5_4:3711907-3711926 | Msa0830660:intron | 25.0% |
| !! | CTTTATTTGGTAGAATTGAA+GGG | - | chr5_4:3711908-3711927 | Msa0830660:intron | 25.0% |
| ! | TTTATTTGGTAGAATTGAAG+GGG | - | chr5_4:3711909-3711928 | Msa0830660:intron | 25.0% |
| !!! | GGTGTTATAGTTATATTTTG+TGG | - | chr5_4:3711944-3711963 | Msa0830660:intron | 25.0% |
| !! | TCTGGTTATTACAAAGATTT+TGG | - | chr5_4:3712096-3712115 | Msa0830660:intron | 25.0% |
| !! | CTGGTTATTACAAAGATTTT+GGG | - | chr5_4:3712097-3712116 | Msa0830660:intron | 25.0% |
| !! | TGGTTATTACAAAGATTTTG+GGG | - | chr5_4:3712098-3712117 | Msa0830660:intron | 25.0% |
| ! | AAAGAAGATAATTTGGCATT+TGG | + | chr5_4:3712213-3712232 | None:intergenic | 25.0% |
| ! | CATTGAAGAAAGAAAGTAAA+AGG | + | chr5_4:3712524-3712543 | None:intergenic | 25.0% |
| ! | AATGCAAATGAAAACAGATA+AGG | + | chr5_4:3712957-3712976 | None:intergenic | 25.0% |
| !!! | ATTTTAAGTTATCCGATACA+TGG | - | chr5_4:3712974-3712993 | Msa0830660:intron | 25.0% |
| !!! | TTGTTTTGGTGAATTTTGAA+TGG | - | chr5_4:3713143-3713162 | Msa0830660:intron | 25.0% |
| !! | CTTCGAATCATCATATTTTA+TGG | + | chr5_4:3713258-3713277 | None:intergenic | 25.0% |
| ! | AATATGATGATTCGAAGAAA+TGG | - | chr5_4:3713261-3713280 | Msa0830660:CDS | 25.0% |
| !! | AAGGAAAAAGGACTATATTT+TGG | + | chr5_4:3713330-3713349 | None:intergenic | 25.0% |
| !!! | AATTGCATTTTTTGTGTTAG+GGG | + | chr5_4:3713608-3713627 | None:intergenic | 25.0% |
| !!! | GCAACTTTTTTGTAAAGATA+AGG | + | chr5_4:3713678-3713697 | None:intergenic | 25.0% |
| ! | TTACAAAAAAGTTGCGATTA+TGG | - | chr5_4:3713683-3713702 | Msa0830660:intron | 25.0% |
| ! | TTATAGGGTTTAATACAATG+TGG | - | chr5_4:3714209-3714228 | Msa0830660:intron | 25.0% |
| ! | TATAGGGTTTAATACAATGT+GGG | - | chr5_4:3714210-3714229 | Msa0830660:intron | 25.0% |
| ! | GCGGATCAATAAAATTATAT+TGG | + | chr5_4:3714382-3714401 | None:intergenic | 25.0% |
| !! | AATTATAGAGTTGGTCATTT+AGG | + | chr5_4:3714428-3714447 | None:intergenic | 25.0% |
| ! | AATGCTATTCATGAAACAAA+TGG | - | chr5_4:3714474-3714493 | Msa0830660:intron | 25.0% |
| ! | ATTCATATCCATGCAATATT+AGG | + | chr5_4:3714617-3714636 | None:intergenic | 25.0% |
| ! | ATGAAAATGTTTGATGGAAA+GGG | + | chr5_4:3714646-3714665 | None:intergenic | 25.0% |
| ! | TATGAAAATGTTTGATGGAA+AGG | + | chr5_4:3714647-3714666 | None:intergenic | 25.0% |
| !! | TTAGAATCTTTTGCACAATA+AGG | + | chr5_4:3714712-3714731 | None:intergenic | 25.0% |
| !! | TATTTTTCATACAGGTATGA+AGG | - | chr5_4:3714808-3714827 | Msa0830660:intron | 25.0% |
| ! | ATGACAAAAATTTATCTGAG+AGG | + | chr5_4:3714834-3714853 | None:intergenic | 25.0% |
| ! | CAAAAACTAAAACAATGCAA+GGG | + | chr5_4:3714913-3714932 | None:intergenic | 25.0% |
| ! | TTGGAGATAAGATATTAAGT+TGG | + | chr5_4:3715043-3715062 | None:intergenic | 25.0% |
| ! | CTTTACTGTAATTACAGTAT+TGG | + | chr5_4:3715632-3715651 | None:intergenic | 25.0% |
| ! | CAAACAAACAAACATATATG+TGG | - | chr5_4:3716464-3716483 | Msa0830660:CDS | 25.0% |
| ! | AACCATTATCATAGATTTGA+TGG | + | chr5_4:3716538-3716557 | None:intergenic | 25.0% |
| ! | TATCATTAAATACAGTGTTG+AGG | + | chr5_4:3716878-3716897 | None:intergenic | 25.0% |
| !!! | ATAGTGTCATGATTTTTAAG+AGG | + | chr5_4:3716960-3716979 | None:intergenic | 25.0% |
| ! | AATGGAATGTTCTATACTAT+AGG | + | chr5_4:3717030-3717049 | None:intergenic | 25.0% |
| !!! | AGTTTTTTATTGCCTTTCTA+GGG | + | chr5_4:3717110-3717129 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTATTGCCTTTCT+AGG | + | chr5_4:3717111-3717130 | None:intergenic | 25.0% |
| ! | TCAATAATCTAGTAGAAAGT+TGG | - | chr5_4:3717224-3717243 | Msa0830660:intron | 25.0% |
| ! | TGATCAATAGATATTCTTTG+AGG | - | chr5_4:3717324-3717343 | Msa0830660:intron | 25.0% |
| !! | ATATTCTTTGAGGATATGTT+AGG | - | chr5_4:3717334-3717353 | Msa0830660:intron | 25.0% |
| ! | TTGCTTTAGCAAAAACATAA+TGG | - | chr5_4:3717579-3717598 | Msa0830660:intron | 25.0% |
| ! | CAAATTATATATACAGCACA+TGG | + | chr5_4:3717606-3717625 | None:intergenic | 25.0% |
| !!! | AAAATTATTTTGCAGATACC+TGG | - | chr5_4:3717688-3717707 | Msa0830660:intron | 25.0% |
| ! | CATAATAATGCTAGAACTAA+AGG | + | chr5_4:3717812-3717831 | None:intergenic | 25.0% |
| !! | TTTTTCTTATCAAGGTACAA+TGG | - | chr5_4:3717965-3717984 | Msa0830660:five_prime_UTR | 25.0% |
| TTTGTTTGAATCGATCTATG+AGG | + | chr5_4:3710191-3710210 | None:intergenic | 30.0% | |
| GTTATATTGTAGGAGTTCTT+CGG | - | chr5_4:3710395-3710414 | Msa0830660:intron | 30.0% | |
| ! | TCAGGTTTTTCATGTTTACA+TGG | - | chr5_4:3710584-3710603 | Msa0830660:intron | 30.0% |
| !! | CCTGTTGTATTTTGTTTACA+CGG | - | chr5_4:3710621-3710640 | Msa0830660:intron | 30.0% |
| TTAGTTTCATGGTTGTAGTT+AGG | + | chr5_4:3711094-3711113 | None:intergenic | 30.0% | |
| AAGCCTGTAATGAAATAATG+TGG | + | chr5_4:3711375-3711394 | None:intergenic | 30.0% | |
| GTATAATTAAGGAGAAAGCT+AGG | - | chr5_4:3711414-3711433 | Msa0830660:intron | 30.0% | |
| !!! | TGATTTTGACTTATCTGTTG+AGG | - | chr5_4:3711484-3711503 | Msa0830660:intron | 30.0% |
| !! | TGATGTATTGGCTGTTATAA+AGG | - | chr5_4:3711609-3711628 | Msa0830660:intron | 30.0% |
| CATGTTCTTGTATGAAAAAC+CGG | + | chr5_4:3711720-3711739 | None:intergenic | 30.0% | |
| ! | ATTCAAGTTAGTCGATAAAG+TGG | + | chr5_4:3711744-3711763 | None:intergenic | 30.0% |
| TAGTTTCAGTGCATTTAATC+TGG | + | chr5_4:3711818-3711837 | None:intergenic | 30.0% | |
| ! | ATAATACAACTCTTGGTAAC+TGG | - | chr5_4:3711870-3711889 | Msa0830660:intron | 30.0% |
| ! | TAATACAACTCTTGGTAACT+GGG | - | chr5_4:3711871-3711890 | Msa0830660:intron | 30.0% |
| ! | TTGGTAACTGGGTAAAAATT+TGG | - | chr5_4:3711882-3711901 | Msa0830660:intron | 30.0% |
| TTATTTGGTAGAATTGAAGG+GGG | - | chr5_4:3711910-3711929 | Msa0830660:intron | 30.0% | |
| AAGCATCATCTATGCTATAT+TGG | - | chr5_4:3711988-3712007 | Msa0830660:intron | 30.0% | |
| !! | TATTACAAAGATTTTGGGGA+TGG | - | chr5_4:3712102-3712121 | Msa0830660:intron | 30.0% |
| ATAATTTGGCATTTGGCTAA+TGG | + | chr5_4:3712206-3712225 | None:intergenic | 30.0% | |
| ACGAGGAAAAGAAGATAATT+TGG | + | chr5_4:3712220-3712239 | None:intergenic | 30.0% | |
| TTGTATGTGATTGCTAAACT+TGG | - | chr5_4:3712380-3712399 | Msa0830660:intron | 30.0% | |
| ! | GGTTCACCAAATATTTCTAT+AGG | + | chr5_4:3712556-3712575 | None:intergenic | 30.0% |
| ! | TTTTATCCATCATCAAAGCA+TGG | - | chr5_4:3712656-3712675 | Msa0830660:intron | 30.0% |
| TTTATCCATCATCAAAGCAT+GGG | - | chr5_4:3712657-3712676 | Msa0830660:intron | 30.0% | |
| CAATGAGGAACTTAACTATT+AGG | + | chr5_4:3712777-3712796 | None:intergenic | 30.0% | |
| AAGTTGTAGTAAAAGCAATG+AGG | + | chr5_4:3712792-3712811 | None:intergenic | 30.0% | |
| TTACTACAACTTACTAGTCA+CGG | - | chr5_4:3712800-3712819 | Msa0830660:intron | 30.0% | |
| TTGATTGTCACAAGAATTTC+AGG | - | chr5_4:3712838-3712857 | Msa0830660:intron | 30.0% | |
| TGATTGTCACAAGAATTTCA+GGG | - | chr5_4:3712839-3712858 | Msa0830660:intron | 30.0% | |
| ! | TGTCACAACTGTTTTCAATT+TGG | - | chr5_4:3712998-3713017 | Msa0830660:intron | 30.0% |
| ACTTAGGATGACATAGATAA+AGG | + | chr5_4:3713080-3713099 | None:intergenic | 30.0% | |
| TAAGCAGTGCATAATAACTT+AGG | + | chr5_4:3713096-3713115 | None:intergenic | 30.0% | |
| !!! | GAGTGTTGTTTCATTTGTTT+TGG | - | chr5_4:3713129-3713148 | Msa0830660:intron | 30.0% |
| ! | TCATCATATTTTATGGTGGT+GGG | + | chr5_4:3713251-3713270 | None:intergenic | 30.0% |
| ! | ATCATCATATTTTATGGTGG+TGG | + | chr5_4:3713252-3713271 | None:intergenic | 30.0% |
| ! | CGAATCATCATATTTTATGG+TGG | + | chr5_4:3713255-3713274 | None:intergenic | 30.0% |
| TAAGCATAAAACGAAGTCTA+TGG | + | chr5_4:3713376-3713395 | None:intergenic | 30.0% | |
| ! | GACTTCGTTTTATGCTTAAT+TGG | - | chr5_4:3713378-3713397 | Msa0830660:intron | 30.0% |
| TGGAAAAGACTGAACAATAT+TGG | - | chr5_4:3713445-3713464 | Msa0830660:intron | 30.0% | |
| AAGACTGAACAATATTGGAA+AGG | - | chr5_4:3713450-3713469 | Msa0830660:intron | 30.0% | |
| !!! | ATTGCATTTTTTGTGTTAGG+GGG | + | chr5_4:3713607-3713626 | None:intergenic | 30.0% |
| AGAGTATATTTCCCTAAAGA+TGG | + | chr5_4:3713648-3713667 | None:intergenic | 30.0% | |
| TCAACATAGTTGGGAAAATT+AGG | - | chr5_4:3713734-3713753 | Msa0830660:intron | 30.0% | |
| CAACATAGTTGGGAAAATTA+GGG | - | chr5_4:3713735-3713754 | Msa0830660:intron | 30.0% | |
| AACATAGTTGGGAAAATTAG+GGG | - | chr5_4:3713736-3713755 | Msa0830660:intron | 30.0% | |
| ! | ATTTGCATTCGTAGCAATTT+TGG | + | chr5_4:3713763-3713782 | None:intergenic | 30.0% |
| ATTGCTACGAATGCAAATAT+AGG | - | chr5_4:3713765-3713784 | Msa0830660:intron | 30.0% | |
| TTGCTACGAATGCAAATATA+GGG | - | chr5_4:3713766-3713785 | Msa0830660:intron | 30.0% | |
| ! | TGAGAGGAAGATTATCTTTT+AGG | - | chr5_4:3713872-3713891 | Msa0830660:intron | 30.0% |
| !!! | GGAAGATTATCTTTTAGGAT+CGG | - | chr5_4:3713877-3713896 | Msa0830660:intron | 30.0% |
| ! | TTTTGTGATTCTACAGAGAA+AGG | - | chr5_4:3714008-3714027 | Msa0830660:intron | 30.0% |
| !! | ACAAGTGGTATTCCTTATTT+TGG | + | chr5_4:3714344-3714363 | None:intergenic | 30.0% |
| TAGGGAGAAAAATAAATACG+CGG | + | chr5_4:3714401-3714420 | None:intergenic | 30.0% | |
| GTTGGTCATTTAGGTATTTA+GGG | + | chr5_4:3714419-3714438 | None:intergenic | 30.0% | |
| AGTTGGTCATTTAGGTATTT+AGG | + | chr5_4:3714420-3714439 | None:intergenic | 30.0% | |
| ! | AGTGTTGGAAATTATAGAGT+TGG | + | chr5_4:3714437-3714456 | None:intergenic | 30.0% |
| ! | ATAGCATTTGTTAACTACTG+TGG | + | chr5_4:3714462-3714481 | None:intergenic | 30.0% |
| ! | CTGTATCTGTTTTATGTAAG+AGG | - | chr5_4:3714501-3714520 | Msa0830660:intron | 30.0% |
| ! | AGGTTATCATGGATTATTGT+AGG | - | chr5_4:3714584-3714603 | Msa0830660:intron | 30.0% |
| GTTAATTGCCTAATATTGCA+TGG | - | chr5_4:3714606-3714625 | Msa0830660:intron | 30.0% | |
| TTGTGCAAAAGATTCTAAAC+AGG | - | chr5_4:3714714-3714733 | Msa0830660:intron | 30.0% | |
| CCAAAAACTAAAACAATGCA+AGG | + | chr5_4:3714914-3714933 | None:intergenic | 30.0% | |
| !!! | CCTTGCATTGTTTTAGTTTT+TGG | - | chr5_4:3714911-3714930 | Msa0830660:intron | 30.0% |
| CTAGAATGGAATTAAACATC+TGG | - | chr5_4:3715003-3715022 | Msa0830660:intron | 30.0% | |
| ! | CAGTTATCATCAACACTTTT+TGG | + | chr5_4:3715062-3715081 | None:intergenic | 30.0% |
| ! | TAATCTGAAACTGATAACTC+TGG | - | chr5_4:3715177-3715196 | Msa0830660:intron | 30.0% |
| ! | ATTCAGTTTGCTCATAAACT+CGG | + | chr5_4:3715250-3715269 | None:intergenic | 30.0% |
| TTTATTGCTCGTAACCAAAT+AGG | - | chr5_4:3715534-3715553 | Msa0830660:intron | 30.0% | |
| CTGATTAAGTTTGTAGTGTT+TGG | - | chr5_4:3715743-3715762 | Msa0830660:intron | 30.0% | |
| AGAAAAAATTGTTACCGAAC+AGG | - | chr5_4:3715953-3715972 | Msa0830660:intron | 30.0% | |
| AGCCACGATATTCTTATTAT+GGG | + | chr5_4:3716018-3716037 | None:intergenic | 30.0% | |
| ! | GTTTTTACTGTATCCATGAT+TGG | - | chr5_4:3716040-3716059 | Msa0830660:intron | 30.0% |
| AGAAAAAATTGTTACCGAAC+AGG | - | chr5_4:3715953-3715972 | Msa0830660:intron | 30.0% | |
| AGCCACGATATTCTTATTAT+GGG | + | chr5_4:3716018-3716037 | None:intergenic | 30.0% | |
| ! | GTTTTTACTGTATCCATGAT+TGG | - | chr5_4:3716040-3716059 | Msa0830660:intron | 30.0% |
| TAGACAATGAATCTCAAACT+GGG | + | chr5_4:3716510-3716529 | None:intergenic | 30.0% | |
| ATAGACAATGAATCTCAAAC+TGG | + | chr5_4:3716511-3716530 | None:intergenic | 30.0% | |
| AGCCATCAAATCTATGATAA+TGG | - | chr5_4:3716533-3716552 | Msa0830660:intron | 30.0% | |
| ATGGAATCAAATAGTTCATG+TGG | + | chr5_4:3716593-3716612 | None:intergenic | 30.0% | |
| ACATGAACTATTTGATTCCA+TGG | - | chr5_4:3716592-3716611 | Msa0830660:intron | 30.0% | |
| TGATGAAAATAGTGCAAACT+TGG | + | chr5_4:3716642-3716661 | None:intergenic | 30.0% | |
| GAATTACACTAGCATATTTG+AGG | - | chr5_4:3717483-3717502 | Msa0830660:intron | 30.0% | |
| ATGCTTACATATTTGGTAGA+TGG | - | chr5_4:3717833-3717852 | Msa0830660:CDS | 30.0% | |
| GAGATGCCTAAATTAATTGT+GGG | + | chr5_4:3717910-3717929 | None:intergenic | 30.0% | |
| TGAGATGCCTAAATTAATTG+TGG | + | chr5_4:3717911-3717930 | None:intergenic | 30.0% | |
| AATTTAGGCATCTCATATCA+AGG | - | chr5_4:3717916-3717935 | Msa0830660:five_prime_UTR | 30.0% | |
| TCGATTCAAACAAAACGCAA+TGG | - | chr5_4:3710197-3710216 | Msa0830660:three_prime_UTR | 35.0% | |
| GAAAAAGATGAAGATCGAAG+TGG | + | chr5_4:3710346-3710365 | None:intergenic | 35.0% | |
| AAATACACAGACCAATCCAA+CGG | + | chr5_4:3710432-3710451 | None:intergenic | 35.0% | |
| ! | GTTTTTCATGTTTACATGGC+AGG | - | chr5_4:3710588-3710607 | Msa0830660:intron | 35.0% |
| CCGTGTAAACAAAATACAAC+AGG | + | chr5_4:3710624-3710643 | None:intergenic | 35.0% | |
| !! | GTTGTATTTTGTTTACACGG+TGG | - | chr5_4:3710624-3710643 | Msa0830660:intron | 35.0% |
| !! | GATTGATTGTGATTTGCTGA+CGG | - | chr5_4:3710792-3710811 | Msa0830660:intron | 35.0% |
| ! | CATTTTTGATGTTGTGTCCA+TGG | - | chr5_4:3710841-3710860 | Msa0830660:intron | 35.0% |
| AGAGAGTTGTAAACTCTACA+AGG | - | chr5_4:3710946-3710965 | Msa0830660:intron | 35.0% | |
| GAGAGTTGTAAACTCTACAA+GGG | - | chr5_4:3710947-3710966 | Msa0830660:intron | 35.0% | |
| TAACTAACACGTAACCGAAT+AGG | - | chr5_4:3711045-3711064 | Msa0830660:intron | 35.0% | |
| TAACAGTACGTGCACATTTA+AGG | + | chr5_4:3711280-3711299 | None:intergenic | 35.0% | |
| CCTGTAATGAAATAATGTGG+AGG | + | chr5_4:3711372-3711391 | None:intergenic | 35.0% | |
| CCTCCACATTATTTCATTAC+AGG | - | chr5_4:3711369-3711388 | Msa0830660:intron | 35.0% | |
| TGTGTCAACGGGTATAATTA+AGG | - | chr5_4:3711403-3711422 | Msa0830660:intron | 35.0% | |
| TTGACTTATCTGTTGAGGTA+CGG | - | chr5_4:3711489-3711508 | Msa0830660:intron | 35.0% | |
| TGAATCTTTGTGAAGCATGT+TGG | - | chr5_4:3711759-3711778 | Msa0830660:intron | 35.0% | |
| GATGATGCTTGTCATTAAAC+AGG | + | chr5_4:3711978-3711997 | None:intergenic | 35.0% | |
| ! | AACTCAACTCAACTCTGTTT+TGG | + | chr5_4:3712139-3712158 | None:intergenic | 35.0% |
| GACAAATCTAGTCAGATGAA+GGG | + | chr5_4:3712271-3712290 | None:intergenic | 35.0% | |
| TGTATCTGCTGTAAAACTGT+AGG | - | chr5_4:3712329-3712348 | Msa0830660:intron | 35.0% | |
| TTATCCATCATCAAAGCATG+GGG | - | chr5_4:3712658-3712677 | Msa0830660:intron | 35.0% | |
| AAGGAAATCATTGTCAACCT+TGG | - | chr5_4:3712707-3712726 | Msa0830660:intron | 35.0% | |
| AATGTTGCATCCTATTTGAG+AGG | + | chr5_4:3712901-3712920 | None:intergenic | 35.0% | |
| AGATAAGGATACAGAGCTTA+CGG | + | chr5_4:3712942-3712961 | None:intergenic | 35.0% | |
| TTGCTTGTATGCAGATTGAA+TGG | - | chr5_4:3713174-3713193 | Msa0830660:intron | 35.0% | |
| !! | CATCATATTTTATGGTGGTG+GGG | + | chr5_4:3713250-3713269 | None:intergenic | 35.0% |
| TGATGATTCGAAGAAATGGT+TGG | - | chr5_4:3713265-3713284 | Msa0830660:intron | 35.0% | |
| CCAGATTGGATAAAGGAAAA+AGG | + | chr5_4:3713342-3713361 | None:intergenic | 35.0% | |
| ! | CCTTTTTCCTTTATCCAATC+TGG | - | chr5_4:3713339-3713358 | Msa0830660:intron | 35.0% |
| TTATGTTTATCGAACAGAGC+TGG | - | chr5_4:3713425-3713444 | Msa0830660:intron | 35.0% | |
| ! | ATTAGGCTTAAACGCACTTT+TGG | - | chr5_4:3713550-3713569 | Msa0830660:intron | 35.0% |
| CTAAAGATGGCAAAATTAGG+GGG | + | chr5_4:3713635-3713654 | None:intergenic | 35.0% | |
| CCTAAAGATGGCAAAATTAG+GGG | + | chr5_4:3713636-3713655 | None:intergenic | 35.0% | |
| CCCTAAAGATGGCAAAATTA+GGG | + | chr5_4:3713637-3713656 | None:intergenic | 35.0% | |
| ! | CCCTAATTTTGCCATCTTTA+GGG | - | chr5_4:3713634-3713653 | Msa0830660:intron | 35.0% |
| TCCCTAAAGATGGCAAAATT+AGG | + | chr5_4:3713638-3713657 | None:intergenic | 35.0% | |
| ACATAGTTGGGAAAATTAGG+GGG | - | chr5_4:3713737-3713756 | Msa0830660:intron | 35.0% | |
| TGCTACGAATGCAAATATAG+GGG | - | chr5_4:3713767-3713786 | Msa0830660:intron | 35.0% | |
| ! | ATAAGGCTTAAACGCACTTT+TGG | + | chr5_4:3713794-3713813 | None:intergenic | 35.0% |
| GGATACAGTTGATCTATAGT+TGG | + | chr5_4:3714276-3714295 | None:intergenic | 35.0% | |
| ACCACTTGTGTTCTGTAATA+AGG | - | chr5_4:3714355-3714374 | Msa0830660:intron | 35.0% | |
| ACCTTATTACAGAACACAAG+TGG | + | chr5_4:3714359-3714378 | None:intergenic | 35.0% | |
| TTAACTACTGTGGATAGTGT+TGG | + | chr5_4:3714452-3714471 | None:intergenic | 35.0% | |
| GATTCTAAACAGGTAGAACT+AGG | - | chr5_4:3714724-3714743 | Msa0830660:intron | 35.0% | |
| ATTAGCAGGAACAGATAGAT+TGG | - | chr5_4:3714876-3714895 | Msa0830660:CDS | 35.0% | |
| ACAACAAGTAAAGGTTTCTC+TGG | + | chr5_4:3714964-3714983 | None:intergenic | 35.0% | |
| ! | AGAGAAACCTTTACTTGTTG+TGG | - | chr5_4:3714963-3714982 | Msa0830660:intron | 35.0% |
| TGATAAGCCACAACAAGTAA+AGG | + | chr5_4:3714973-3714992 | None:intergenic | 35.0% | |
| CTACTCTACTACTTGGAAAT+TGG | + | chr5_4:3715091-3715110 | None:intergenic | 35.0% | |
| TCACAATCTACTCTACTACT+TGG | + | chr5_4:3715098-3715117 | None:intergenic | 35.0% | |
| ! | TTCAGTTTGCTCATAAACTC+GGG | + | chr5_4:3715249-3715268 | None:intergenic | 35.0% |
| AGCAAACTGAATTGTTCTAG+TGG | - | chr5_4:3715258-3715277 | Msa0830660:intron | 35.0% | |
| AATGAATGCAGCAAGAAACA+TGG | + | chr5_4:3715412-3715431 | None:intergenic | 35.0% | |
| TTATGGTTCTCTTCGTTACT+TGG | - | chr5_4:3715440-3715459 | Msa0830660:intron | 35.0% | |
| ACAAGAGTTGCAAATTCATC+AGG | + | chr5_4:3715507-3715526 | None:intergenic | 35.0% | |
| ! | TAGCTGTTAAGCTAGCTTAT+AGG | - | chr5_4:3715676-3715695 | Msa0830660:intron | 35.0% |
| ! | AGCTGTTAAGCTAGCTTATA+GGG | - | chr5_4:3715677-3715696 | Msa0830660:intron | 35.0% |
| !! | ATCAAAAAGCGCTATATGCT+AGG | - | chr5_4:3715908-3715927 | Msa0830660:intron | 35.0% |
| ATGACCAAAATAGACCTGTT+CGG | + | chr5_4:3715970-3715989 | None:intergenic | 35.0% | |
| TATTCTTATTATGGGGATGG+CGG | + | chr5_4:3716010-3716029 | None:intergenic | 35.0% | |
| CGATATTCTTATTATGGGGA+TGG | + | chr5_4:3716013-3716032 | None:intergenic | 35.0% | |
| TCCCCATAATAAGAATATCG+TGG | - | chr5_4:3716013-3716032 | Msa0830660:intron | 35.0% | |
| GCCACGATATTCTTATTATG+GGG | + | chr5_4:3716017-3716036 | None:intergenic | 35.0% | |
| GAGCCACGATATTCTTATTA+TGG | + | chr5_4:3716019-3716038 | None:intergenic | 35.0% | |
| ACAGGTTTCTCCATTCTATA+TGG | - | chr5_4:3716064-3716083 | Msa0830660:intron | 35.0% | |
| !!! | CTTTTTTTACCTAGCTTCAG+AGG | + | chr5_4:3716165-3716184 | None:intergenic | 35.0% |
| ATGACCAAAATAGACCTGTT+CGG | + | chr5_4:3715970-3715989 | None:intergenic | 35.0% | |
| TATTCTTATTATGGGGATGG+CGG | + | chr5_4:3716010-3716029 | None:intergenic | 35.0% | |
| CGATATTCTTATTATGGGGA+TGG | + | chr5_4:3716013-3716032 | None:intergenic | 35.0% | |
| TCCCCATAATAAGAATATCG+TGG | - | chr5_4:3716013-3716032 | Msa0830660:intron | 35.0% | |
| GCCACGATATTCTTATTATG+GGG | + | chr5_4:3716017-3716036 | None:intergenic | 35.0% | |
| GAGCCACGATATTCTTATTA+TGG | + | chr5_4:3716019-3716038 | None:intergenic | 35.0% | |
| ACAGGTTTCTCCATTCTATA+TGG | - | chr5_4:3716064-3716083 | Msa0830660:intron | 35.0% | |
| !! | TTTGATTTCTGAAGCTTCAG+AGG | + | chr5_4:3716410-3716429 | None:intergenic | 35.0% |
| ATAATGGTTGCCTTCTTTGA+GGG | - | chr5_4:3716549-3716568 | Msa0830660:intron | 35.0% | |
| !! | TTAGTGATGGATACAATGGA+GGG | + | chr5_4:3716723-3716742 | None:intergenic | 35.0% |
| !! | TTGGTTAGTGATGGATACAA+TGG | + | chr5_4:3716727-3716746 | None:intergenic | 35.0% |
| TATCCATCACTAACCAAGAA+AGG | - | chr5_4:3716730-3716749 | Msa0830660:intron | 35.0% | |
| ATTTGCATGAAGGATCAATG+AGG | + | chr5_4:3716906-3716925 | None:intergenic | 35.0% | |
| TTGATCCTTCATGCAAATAC+TGG | - | chr5_4:3716908-3716927 | Msa0830660:intron | 35.0% | |
| AATACTGGTAAGCACAATGA+TGG | - | chr5_4:3716923-3716942 | Msa0830660:intron | 35.0% | |
| TACACACAGACAATATCGAA+TGG | + | chr5_4:3717048-3717067 | None:intergenic | 35.0% | |
| AAAACACTACTTTCAACGAG+GGG | + | chr5_4:3717149-3717168 | None:intergenic | 35.0% | |
| GAAAACACTACTTTCAACGA+GGG | + | chr5_4:3717150-3717169 | None:intergenic | 35.0% | |
| AGAAAACACTACTTTCAACG+AGG | + | chr5_4:3717151-3717170 | None:intergenic | 35.0% | |
| ! | GTGTTTTCTTCATCCCATTT+TGG | - | chr5_4:3717162-3717181 | Msa0830660:intron | 35.0% |
| ! | TGCTTTTCTTACGCCAAAAT+GGG | + | chr5_4:3717178-3717197 | None:intergenic | 35.0% |
| ! | ATGCTTTTCTTACGCCAAAA+TGG | + | chr5_4:3717179-3717198 | None:intergenic | 35.0% |
| ACTTCAATTTCACATTCGCA+CGG | + | chr5_4:3717298-3717317 | None:intergenic | 35.0% | |
| !! | GTTTCTGAGATTATGAGTTC+TGG | - | chr5_4:3717367-3717386 | Msa0830660:intron | 35.0% |
| CTTCATAGCTTAGTAAATGC+AGG | + | chr5_4:3717410-3717429 | None:intergenic | 35.0% | |
| TTTATCCAACACCTGATTCA+GGG | + | chr5_4:3717739-3717758 | None:intergenic | 35.0% | |
| CATCTCATATCAAGGTACAA+TGG | - | chr5_4:3717924-3717943 | Msa0830660:five_prime_UTR | 35.0% | |
| ATCAAGGTACAATGGAAGAA+AGG | - | chr5_4:3717973-3717992 | Msa0830660:five_prime_UTR | 35.0% | |
| TGGAAAAAAGGCTTGATTTC+TGG | - | chr5_4:3718033-3718052 | Msa0830660:five_prime_UTR | 35.0% | |
| GTTTGAATCGATCTATGAGG+AGG | + | chr5_4:3710188-3710207 | None:intergenic | 40.0% | |
| GAAGAAGGTGGTTACTTAGT+TGG | + | chr5_4:3710315-3710334 | None:intergenic | 40.0% | |
| GAAGTGGAAGAAGAAGAAGA+AGG | + | chr5_4:3710330-3710349 | None:intergenic | 40.0% | |
| !! | GTATTTTGTTTACACGGTGG+TGG | - | chr5_4:3710627-3710646 | Msa0830660:intron | 40.0% |
| ! | TTGTCGCAGAGTTAGTTTCA+TGG | + | chr5_4:3711105-3711124 | None:intergenic | 40.0% |
| GGAATAAATCGAGCTGGTTA+GGG | + | chr5_4:3711156-3711175 | None:intergenic | 40.0% | |
| AGGAATAAATCGAGCTGGTT+AGG | + | chr5_4:3711157-3711176 | None:intergenic | 40.0% | |
| !! | GCTTTCATTTGCTGTGTCAA+CGG | - | chr5_4:3711391-3711410 | Msa0830660:intron | 40.0% |
| !! | CTTTCATTTGCTGTGTCAAC+GGG | - | chr5_4:3711392-3711411 | Msa0830660:intron | 40.0% |
| AATTAAGGAGAAAGCTAGGG+TGG | - | chr5_4:3711418-3711437 | Msa0830660:intron | 40.0% | |
| CAAAAACCAGCAACTGAACA+TGG | + | chr5_4:3711561-3711580 | None:intergenic | 40.0% | |
| GACCATGTGCAATGATGTAT+TGG | - | chr5_4:3711597-3711616 | Msa0830660:intron | 40.0% | |
| AGCCAATACATCATTGCACA+TGG | + | chr5_4:3711602-3711621 | None:intergenic | 40.0% | |
| ATTGAAGGGGGACAAATTTC+AGG | - | chr5_4:3711922-3711941 | Msa0830660:intron | 40.0% | |
| TTGAAGGGGGACAAATTTCA+GGG | - | chr5_4:3711923-3711942 | Msa0830660:intron | 40.0% | |
| TCCTTCGTTGAACTTCACAT+GGG | + | chr5_4:3712058-3712077 | None:intergenic | 40.0% | |
| TTCCTTCGTTGAACTTCACA+TGG | + | chr5_4:3712059-3712078 | None:intergenic | 40.0% | |
| TGTGAAGTTCAACGAAGGAA+AGG | - | chr5_4:3712059-3712078 | Msa0830660:intron | 40.0% | |
| ATGAGGCAGGTAAAAAAACG+AGG | + | chr5_4:3712237-3712256 | None:intergenic | 40.0% | |
| CGACAAATCTAGTCAGATGA+AGG | + | chr5_4:3712272-3712291 | None:intergenic | 40.0% | |
| TATCCATCATCAAAGCATGG+GGG | - | chr5_4:3712659-3712678 | Msa0830660:intron | 40.0% | |
| AAATCATTGTCAACCTTGGC+TGG | - | chr5_4:3712711-3712730 | Msa0830660:CDS | 40.0% | |
| AATCATTGTCAACCTTGGCT+GGG | - | chr5_4:3712712-3712731 | Msa0830660:CDS | 40.0% | |
| GATTGTTGTGGATGTTGTAG+AGG | - | chr5_4:3712737-3712756 | Msa0830660:CDS | 40.0% | |
| TACAACTTACTAGTCACGGA+TGG | - | chr5_4:3712804-3712823 | Msa0830660:intron | 40.0% | |
| ACAACTTACTAGTCACGGAT+GGG | - | chr5_4:3712805-3712824 | Msa0830660:intron | 40.0% | |
| AGAATTTCAGGGAACAGCAA+TGG | - | chr5_4:3712850-3712869 | Msa0830660:intron | 40.0% | |
| TGCAGCAAATCCTCTCAAAT+AGG | - | chr5_4:3712888-3712907 | Msa0830660:intron | 40.0% | |
| CAGTTGTGACAACCATGTAT+CGG | + | chr5_4:3712989-3713008 | None:intergenic | 40.0% | |
| GTAATGAAAAGCAAGGAGAG+AGG | + | chr5_4:3713293-3713312 | None:intergenic | 40.0% | |
| !! | CTCCTTGCTTTTCATTACAC+TGG | - | chr5_4:3713295-3713314 | Msa0830660:intron | 40.0% |
| CACCAGTGTAATGAAAAGCA+AGG | + | chr5_4:3713300-3713319 | None:intergenic | 40.0% | |
| !! | CTTGCTTTTCATTACACTGG+TGG | - | chr5_4:3713298-3713317 | Msa0830660:intron | 40.0% |
| AGCTAGTCCAGATTGGATAA+AGG | + | chr5_4:3713349-3713368 | None:intergenic | 40.0% | |
| !! | TTTATCCAATCTGGACTAGC+TGG | - | chr5_4:3713348-3713367 | Msa0830660:intron | 40.0% |
| CTGAACAATATTGGAAAGGC+TGG | - | chr5_4:3713454-3713473 | Msa0830660:intron | 40.0% | |
| TTGCTACGATGGCAAACATT+GGG | + | chr5_4:3713578-3713597 | None:intergenic | 40.0% | |
| ATTGCTACGATGGCAAACAT+TGG | + | chr5_4:3713579-3713598 | None:intergenic | 40.0% | |
| ! | GTTTGCCATCGTAGCAATTT+TGG | - | chr5_4:3713581-3713600 | Msa0830660:intron | 40.0% |
| ! | CCCCTAATTTTGCCATCTTT+AGG | - | chr5_4:3713633-3713652 | Msa0830660:intron | 40.0% |
| GCTACGAATGCAAATATAGG+GGG | - | chr5_4:3713768-3713787 | Msa0830660:intron | 40.0% | |
| TAGACAGCTAGAGCTGTTAT+AGG | - | chr5_4:3714193-3714212 | Msa0830660:intron | 40.0% | |
| AGACAGCTAGAGCTGTTATA+GGG | - | chr5_4:3714194-3714213 | Msa0830660:intron | 40.0% | |
| CAAGGTCAAACAATTCATCG+AGG | + | chr5_4:3714546-3714565 | None:intergenic | 40.0% | |
| ATAACAACAGCTTCGGAACA+GGG | + | chr5_4:3714858-3714877 | None:intergenic | 40.0% | |
| AATAACAACAGCTTCGGAAC+AGG | + | chr5_4:3714859-3714878 | None:intergenic | 40.0% | |
| CCTGCTAATAACAACAGCTT+CGG | + | chr5_4:3714865-3714884 | None:intergenic | 40.0% | |
| ! | TCAGTTTGCTCATAAACTCG+GGG | + | chr5_4:3715248-3715267 | None:intergenic | 40.0% |
| !! | ATTGGCACTGTTTCTGTAAC+AGG | - | chr5_4:3715303-3715322 | Msa0830660:intron | 40.0% |
| TGTAACAGGTCTCTCACAAT+TGG | - | chr5_4:3715317-3715336 | Msa0830660:intron | 40.0% | |
| CTCACAATTGGTCAAATGCA+AGG | - | chr5_4:3715329-3715348 | Msa0830660:intron | 40.0% | |
| ATGATAGTTGTCAGACACAC+AGG | - | chr5_4:3715362-3715381 | Msa0830660:CDS | 40.0% | |
| TGATAGTTGTCAGACACACA+GGG | - | chr5_4:3715363-3715382 | Msa0830660:CDS | 40.0% | |
| TACATACCACGACTCCATTA+GGG | + | chr5_4:3715560-3715579 | None:intergenic | 40.0% | |
| ATACATACCACGACTCCATT+AGG | + | chr5_4:3715561-3715580 | None:intergenic | 40.0% | |
| GTTTACGATTGTCCTGCAAA+TGG | - | chr5_4:3715604-3715623 | Msa0830660:intron | 40.0% | |
| !! | ACAGTATTGGTACCATTTGC+AGG | + | chr5_4:3715619-3715638 | None:intergenic | 40.0% |
| ! | GCTGTTAAGCTAGCTTATAG+GGG | - | chr5_4:3715678-3715697 | Msa0830660:intron | 40.0% |
| GTAGTGTTTGGCAAAATCAG+CGG | - | chr5_4:3715755-3715774 | Msa0830660:intron | 40.0% | |
| ! | GTTACCGAACAGGTCTATTT+TGG | - | chr5_4:3715963-3715982 | Msa0830660:intron | 40.0% |
| ACTGTATCCATGATTGGAAC+AGG | - | chr5_4:3716046-3716065 | Msa0830660:intron | 40.0% | |
| ! | GTTACCGAACAGGTCTATTT+TGG | - | chr5_4:3715963-3715982 | Msa0830660:intron | 40.0% |
| ACTGTATCCATGATTGGAAC+AGG | - | chr5_4:3716046-3716065 | Msa0830660:intron | 40.0% | |
| ! | GATAATGGTTGCCTTCTTTG+AGG | - | chr5_4:3716548-3716567 | Msa0830660:intron | 40.0% |
| ACATAGCATACCCTCAAAGA+AGG | + | chr5_4:3716562-3716581 | None:intergenic | 40.0% | |
| AACTTGGACCTAATCGGAAA+CGG | + | chr5_4:3716626-3716645 | None:intergenic | 40.0% | |
| AGTGCAAACTTGGACCTAAT+CGG | + | chr5_4:3716632-3716651 | None:intergenic | 40.0% | |
| AGCATGCATGCATTTAGTCA+TGG | - | chr5_4:3716672-3716691 | Msa0830660:CDS | 40.0% | |
| !! | GTTAGTGATGGATACAATGG+AGG | + | chr5_4:3716724-3716743 | None:intergenic | 40.0% |
| GTTCCTTTCTTGGTTAGTGA+TGG | + | chr5_4:3716736-3716755 | None:intergenic | 40.0% | |
| ACTAACCAAGAAAGGAACGA+GGG | - | chr5_4:3716738-3716757 | Msa0830660:intron | 40.0% | |
| GCTTACCAGTATTTGCATGA+AGG | + | chr5_4:3716916-3716935 | None:intergenic | 40.0% | |
| CATGACACTATCTCCTTACA+AGG | - | chr5_4:3716969-3716988 | Msa0830660:intron | 40.0% | |
| !! | TCGTCTCGTTTTTCCTTGTA+AGG | + | chr5_4:3716985-3717004 | None:intergenic | 40.0% |
| GTGTTGAATCAGACTATACG+AGG | + | chr5_4:3717268-3717287 | None:intergenic | 40.0% | |
| CTTCAATTTCACATTCGCAC+GGG | + | chr5_4:3717297-3717316 | None:intergenic | 40.0% | |
| GTTTATCCAACACCTGATTC+AGG | + | chr5_4:3717740-3717759 | None:intergenic | 40.0% | |
| ! | GGTGTTGGATAAACCAAGAA+CGG | - | chr5_4:3717746-3717765 | Msa0830660:intron | 40.0% |
| TTCATGTTGAAGTGGCGCAT+TGG | + | chr5_4:3710036-3710055 | None:intergenic | 45.0% | |
| TTGATCGTCGGTGATGTCTT+CGG | + | chr5_4:3710247-3710266 | None:intergenic | 45.0% | |
| TTGAGGAGCAGAAGCGAAAA+CGG | + | chr5_4:3710286-3710305 | None:intergenic | 45.0% | |
| TACTTAGTTGGAGGACGTTG+AGG | + | chr5_4:3710303-3710322 | None:intergenic | 45.0% | |
| GAAGGTGGTTACTTAGTTGG+AGG | + | chr5_4:3710312-3710331 | None:intergenic | 45.0% | |
| GTGGAAGAAGAAGAAGAAGG+TGG | + | chr5_4:3710327-3710346 | None:intergenic | 45.0% | |
| AGAAATACGCACCGTTGGAT+TGG | - | chr5_4:3710418-3710437 | Msa0830660:intron | 45.0% | |
| TGTTTACATGGCAGGAACTG+AGG | - | chr5_4:3710596-3710615 | Msa0830660:intron | 45.0% | |
| GTTTACATGGCAGGAACTGA+GGG | - | chr5_4:3710597-3710616 | Msa0830660:intron | 45.0% | |
| ! | TTACACGGTGGTGGTTATTC+TGG | - | chr5_4:3710636-3710655 | Msa0830660:intron | 45.0% |
| ! | TACACGGTGGTGGTTATTCT+GGG | - | chr5_4:3710637-3710656 | Msa0830660:intron | 45.0% |
| CCATGGAGTGACATGGAAAT+CGG | - | chr5_4:3710858-3710877 | Msa0830660:intron | 45.0% | |
| !! | AAGATCGCGGGTGTTATTGA+TGG | - | chr5_4:3711123-3711142 | Msa0830660:intron | 45.0% |
| !! | AGATCGCGGGTGTTATTGAT+GGG | - | chr5_4:3711124-3711143 | Msa0830660:intron | 45.0% |
| GTGTGAGGAATAAATCGAGC+TGG | + | chr5_4:3711162-3711181 | None:intergenic | 45.0% | |
| GCACAGATCTTTCATGTGTG+AGG | + | chr5_4:3711177-3711196 | None:intergenic | 45.0% | |
| TGACCAACGAGGATAATTGC+TGG | + | chr5_4:3711655-3711674 | None:intergenic | 45.0% | |
| CAATTATCCTCGTTGGTCAC+AGG | - | chr5_4:3711656-3711675 | Msa0830660:intron | 45.0% | |
| TAAATCACCTGTGACCAACG+AGG | + | chr5_4:3711666-3711685 | None:intergenic | 45.0% | |
| CAGAAAGTGATAACCGAGTC+AGG | + | chr5_4:3712582-3712601 | None:intergenic | 45.0% | |
| ATCCATCATCAAAGCATGGG+GGG | - | chr5_4:3712660-3712679 | Msa0830660:intron | 45.0% | |
| TTGCTGTGCATATTGCTGCA+AGG | - | chr5_4:3712688-3712707 | Msa0830660:intron | 45.0% | |
| GTTGTGGATGTTGTAGAGGT+TGG | - | chr5_4:3712741-3712760 | Msa0830660:CDS | 45.0% | |
| TGCAGATTGAATGGAGTGTG+AGG | - | chr5_4:3713183-3713202 | Msa0830660:intron | 45.0% | |
| GCAGATTGAATGGAGTGTGA+GGG | - | chr5_4:3713184-3713203 | Msa0830660:intron | 45.0% | |
| TGCTACGATGGCAAACATTG+GGG | + | chr5_4:3713577-3713596 | None:intergenic | 45.0% | |
| !!! | TGCGATTATGGCCCCTTTTT+TGG | - | chr5_4:3713695-3713714 | Msa0830660:intron | 45.0% |
| !!! | GCGATTATGGCCCCTTTTTT+GGG | - | chr5_4:3713696-3713715 | Msa0830660:intron | 45.0% |
| TGACCTACACTAGCAGGTTA+AGG | - | chr5_4:3714125-3714144 | Msa0830660:intron | 45.0% | |
| CATCCTTAACCTGCTAGTGT+AGG | + | chr5_4:3714131-3714150 | None:intergenic | 45.0% | |
| TTGACTGACTGACACATGTC+AGG | - | chr5_4:3714152-3714171 | Msa0830660:intron | 45.0% | |
| TAACAACAGCTTCGGAACAG+GGG | + | chr5_4:3714857-3714876 | None:intergenic | 45.0% | |
| ! | CCGAAGCTGTTGTTATTAGC+AGG | - | chr5_4:3714862-3714881 | Msa0830660:CDS | 45.0% |
| CAGGAACAGATAGATTGGAC+AGG | - | chr5_4:3714881-3714900 | Msa0830660:CDS | 45.0% | |
| CGTAACCAAATAGGCCCTAA+TGG | - | chr5_4:3715543-3715562 | Msa0830660:intron | 45.0% | |
| GGAGAAACCTGTTCCAATCA+TGG | + | chr5_4:3716056-3716075 | None:intergenic | 45.0% | |
| ! | CAACCTCAACTAGTCTGATG+AGG | - | chr5_4:3716130-3716149 | Msa0830660:intron | 45.0% |
| !! | CAGACAAATCCTCTGAAGCT+AGG | - | chr5_4:3716153-3716172 | Msa0830660:intron | 45.0% |
| GGAGAAACCTGTTCCAATCA+TGG | + | chr5_4:3716056-3716075 | None:intergenic | 45.0% | |
| ! | CAACCTCAACTAGTCTGATG+AGG | - | chr5_4:3716130-3716149 | Msa0830660:intron | 45.0% |
| ATACCCTTCCGTTTCCGATT+AGG | - | chr5_4:3716615-3716634 | Msa0830660:CDS | 45.0% | |
| TTAGTCATGGAACAGCCATC+AGG | - | chr5_4:3716685-3716704 | Msa0830660:CDS | 45.0% | |
| TAGTCATGGAACAGCCATCA+GGG | - | chr5_4:3716686-3716705 | Msa0830660:CDS | 45.0% | |
| GGGTGAAAAGATTACCCTGA+TGG | + | chr5_4:3716703-3716722 | None:intergenic | 45.0% | |
| CACTAACCAAGAAAGGAACG+AGG | - | chr5_4:3716737-3716756 | Msa0830660:intron | 45.0% | |
| CTAACCAAGAAAGGAACGAG+GGG | - | chr5_4:3716739-3716758 | Msa0830660:intron | 45.0% | |
| TAACCAAGAAAGGAACGAGG+GGG | - | chr5_4:3716740-3716759 | Msa0830660:intron | 45.0% | |
| GAGGGGGGACATATCTTAAT+GGG | - | chr5_4:3716756-3716775 | Msa0830660:intron | 45.0% | |
| AGGGGGGACATATCTTAATG+GGG | - | chr5_4:3716757-3716776 | Msa0830660:intron | 45.0% | |
| ! | CTACGAATGTCTGTGTTGAC+TGG | - | chr5_4:3717078-3717097 | Msa0830660:intron | 45.0% |
| GACTGGAGATATCCCTAGAA+AGG | - | chr5_4:3717095-3717114 | Msa0830660:intron | 45.0% | |
| CTACTTTCAACGAGGGGATT+GGG | + | chr5_4:3717143-3717162 | None:intergenic | 45.0% | |
| ACTACTTTCAACGAGGGGAT+TGG | + | chr5_4:3717144-3717163 | None:intergenic | 45.0% | |
| TATACGAGGAGTGGAACTGA+AGG | + | chr5_4:3717254-3717273 | None:intergenic | 45.0% | |
| GAATCAGACTATACGAGGAG+TGG | + | chr5_4:3717263-3717282 | None:intergenic | 45.0% | |
| ATTCAGGGTTTCGAAAAGGC+AGG | + | chr5_4:3717724-3717743 | None:intergenic | 45.0% | |
| CCTGATTCAGGGTTTCGAAA+AGG | + | chr5_4:3717728-3717747 | None:intergenic | 45.0% | |
| ! | CCTTTTCGAAACCCTGAATC+AGG | - | chr5_4:3717725-3717744 | Msa0830660:intron | 45.0% |
| !!! | ATATAAATGATAATTAATTT+TGG | - | chr5_4:3712604-3712623 | Msa0830660:intron | 5.0% |
| !! | TAATTATTATAATAATAATG+AGG | - | chr5_4:3713914-3713933 | Msa0830660:intron | 5.0% |
| TGATCGTCGGTGATGTCTTC+GGG | + | chr5_4:3710246-3710265 | None:intergenic | 50.0% | |
| AGCAGAAGCGAAAACGGAAG+CGG | + | chr5_4:3710280-3710299 | None:intergenic | 50.0% | |
| TTCGGAGAAATACGCACCGT+TGG | - | chr5_4:3710413-3710432 | Msa0830660:intron | 50.0% | |
| GTTGTGTCCATGGAGTGACA+TGG | - | chr5_4:3710851-3710870 | Msa0830660:intron | 50.0% | |
| CCGATTTCCATGTCACTCCA+TGG | + | chr5_4:3710861-3710880 | None:intergenic | 50.0% | |
| CTAACTCTGCGACAAGATCG+CGG | - | chr5_4:3711110-3711129 | Msa0830660:intron | 50.0% | |
| TAACTCTGCGACAAGATCGC+GGG | - | chr5_4:3711111-3711130 | Msa0830660:intron | 50.0% | |
| TGTGTGCCATGTTCAGTTGC+TGG | - | chr5_4:3711552-3711571 | Msa0830660:intron | 50.0% | |
| CCAACGAGGATAATTGCTGG+AGG | + | chr5_4:3711652-3711671 | None:intergenic | 50.0% | |
| CCTCCAGCAATTATCCTCGT+TGG | - | chr5_4:3711649-3711668 | Msa0830660:intron | 50.0% | |
| GCCCATGTGAAGTTCAACGA+AGG | - | chr5_4:3712054-3712073 | Msa0830660:intron | 50.0% | |
| AGTCAGATGAAGGGAAGCTG+TGG | + | chr5_4:3712262-3712281 | None:intergenic | 50.0% | |
| TTGGTGAACCTAGCCTGACT+CGG | - | chr5_4:3712566-3712585 | Msa0830660:CDS | 50.0% | |
| AGTGATAACCGAGTCAGGCT+AGG | + | chr5_4:3712577-3712596 | None:intergenic | 50.0% | |
| TCCATCATCAAAGCATGGGG+GGG | - | chr5_4:3712661-3712680 | Msa0830660:intron | 50.0% | |
| CACAACAATCAACCCAGCCA+AGG | + | chr5_4:3712727-3712746 | None:intergenic | 50.0% | |
| !! | CTTGGCTGGGTTGATTGTTG+TGG | - | chr5_4:3712725-3712744 | Msa0830660:CDS | 50.0% |
| ATTGAATGGAGTGTGAGGGC+TGG | - | chr5_4:3713188-3713207 | Msa0830660:intron | 50.0% | |
| TGGAACCAGCTAGTCCAGAT+TGG | + | chr5_4:3713356-3713375 | None:intergenic | 50.0% | |
| GCTACGATGGCAAACATTGG+GGG | + | chr5_4:3713576-3713595 | None:intergenic | 50.0% | |
| TGGCGGCTTCTCAACATAGT+TGG | - | chr5_4:3713724-3713743 | Msa0830660:intron | 50.0% | |
| GGCGGCTTCTCAACATAGTT+GGG | - | chr5_4:3713725-3713744 | Msa0830660:intron | 50.0% | |
| ACCTGCTAGTGTAGGTCACA+AGG | + | chr5_4:3714123-3714142 | None:intergenic | 50.0% | |
| ! | AAAGCTCGTGGAAGCTTTGG+TGG | + | chr5_4:3714241-3714260 | None:intergenic | 50.0% |
| ACCAAAGCTTCCACGAGCTT+TGG | - | chr5_4:3714240-3714259 | Msa0830660:intron | 50.0% | |
| ACCAAAGCTCGTGGAAGCTT+TGG | + | chr5_4:3714244-3714263 | None:intergenic | 50.0% | |
| CCATGATAACCTCCATCTGC+AGG | + | chr5_4:3714576-3714595 | None:intergenic | 50.0% | |
| CCTGCAGATGGAGGTTATCA+TGG | - | chr5_4:3714573-3714592 | Msa0830660:intron | 50.0% | |
| ACACACAGGGCATGCTATTC+AGG | - | chr5_4:3715376-3715395 | Msa0830660:CDS | 50.0% | |
| CGACTCCATTAGGGCCTATT+TGG | + | chr5_4:3715551-3715570 | None:intergenic | 50.0% | |
| AATAGGCCCTAATGGAGTCG+TGG | - | chr5_4:3715551-3715570 | Msa0830660:intron | 50.0% | |
| ! | CTGCCTCATCAGACTAGTTG+AGG | + | chr5_4:3716136-3716155 | None:intergenic | 50.0% |
| ! | CTGCCTCATCAGACTAGTTG+AGG | + | chr5_4:3716136-3716155 | None:intergenic | 50.0% |
| GGACCTAATCGGAAACGGAA+GGG | + | chr5_4:3716621-3716640 | None:intergenic | 50.0% | |
| TGGACCTAATCGGAAACGGA+AGG | + | chr5_4:3716622-3716641 | None:intergenic | 50.0% | |
| AACCAAGAAAGGAACGAGGG+GGG | - | chr5_4:3716741-3716760 | Msa0830660:intron | 50.0% | |
| CGAGGGGGGACATATCTTAA+TGG | - | chr5_4:3716755-3716774 | Msa0830660:intron | 50.0% | |
| GTTTCGAAAAGGCAGGCTTG+GGG | + | chr5_4:3717717-3717736 | None:intergenic | 50.0% | |
| GGTTTCGAAAAGGCAGGCTT+GGG | + | chr5_4:3717718-3717737 | None:intergenic | 50.0% | |
| CGAAACCCTGAATCAGGTGT+TGG | - | chr5_4:3717731-3717750 | Msa0830660:intron | 50.0% | |
| GATCGTCGGTGATGTCTTCG+GGG | + | chr5_4:3710245-3710264 | None:intergenic | 55.0% | |
| GGGTTGTGGTGGTTGATCGT+CGG | + | chr5_4:3710259-3710278 | None:intergenic | 55.0% | |
| !! | AAAACGGAAGCGGGTTGTGG+TGG | + | chr5_4:3710270-3710289 | None:intergenic | 55.0% |
| GCAGAAGCGAAAACGGAAGC+GGG | + | chr5_4:3710279-3710298 | None:intergenic | 55.0% | |
| GAAAGCTAGGGTGGTTGCGA+TGG | - | chr5_4:3711427-3711446 | Msa0830660:intron | 55.0% | |
| ! | GTGGTTGCGATGGACTTGAG+AGG | - | chr5_4:3711437-3711456 | Msa0830660:intron | 55.0% |
| ! | GCGATGGACTTGAGAGGTCA+TGG | - | chr5_4:3711443-3711462 | Msa0830660:intron | 55.0% |
| ! | GAAGGGAAGCTGTGGTGATG+AGG | + | chr5_4:3712254-3712273 | None:intergenic | 55.0% |
| ACCCCCCCATGCTTTGATGA+TGG | + | chr5_4:3712665-3712684 | None:intergenic | 55.0% | |
| GGGGGCCAAAATTGCTACGA+TGG | + | chr5_4:3713755-3713774 | None:intergenic | 55.0% | |
| CGCCACGTGTCCCAAAAAAG+GGG | + | chr5_4:3713709-3713728 | None:intergenic | 55.0% | |
| CCGCCACGTGTCCCAAAAAA+GGG | + | chr5_4:3713710-3713729 | None:intergenic | 55.0% | |
| !!! | CCCTTTTTTGGGACACGTGG+CGG | - | chr5_4:3713707-3713726 | Msa0830660:intron | 55.0% |
| GCCTTGTGACCTACACTAGC+AGG | - | chr5_4:3714119-3714138 | Msa0830660:intron | 55.0% | |
| ! | AGCTTCCACGAGCTTTGGTC+AGG | - | chr5_4:3714245-3714264 | Msa0830660:intron | 55.0% |
| TCTGTCCTGACCAAAGCTCG+TGG | + | chr5_4:3714253-3714272 | None:intergenic | 55.0% | |
| CCATCTGCAGGACAGATGCA+AGG | + | chr5_4:3714564-3714583 | None:intergenic | 55.0% | |
| CCTTGCATCTGTCCTGCAGA+TGG | - | chr5_4:3714561-3714580 | Msa0830660:intron | 55.0% | |
| TGCATCTGTCCTGCAGATGG+AGG | - | chr5_4:3714564-3714583 | Msa0830660:intron | 55.0% | |
| !! | CGGAAACGGAAGGGTATCCA+TGG | + | chr5_4:3716612-3716631 | None:intergenic | 55.0% |
| GGGTTTCGAAAAGGCAGGCT+TGG | + | chr5_4:3717719-3717738 | None:intergenic | 55.0% | |
| CAAGAACGGCAACTGCTGCT+GGG | - | chr5_4:3717760-3717779 | Msa0830660:intron | 55.0% | |
| CAACTGCTGCTGGGTGATGA+TGG | - | chr5_4:3717769-3717788 | Msa0830660:intron | 55.0% | |
| !! | GCGAAAACGGAAGCGGGTTG+TGG | + | chr5_4:3710273-3710292 | None:intergenic | 60.0% |
| ! | GGAAGCTGTGGTGATGAGGC+AGG | + | chr5_4:3712250-3712269 | None:intergenic | 60.0% |
| !!! | GGCCCCTTTTTTGGGACACG+TGG | - | chr5_4:3713704-3713723 | Msa0830660:intron | 60.0% |
| GCCGCCACGTGTCCCAAAAA+AGG | + | chr5_4:3713711-3713730 | None:intergenic | 60.0% | |
| GTCCCCCCTCGTTCCTTTCT+TGG | + | chr5_4:3716746-3716765 | None:intergenic | 60.0% | |
| TCGAAAAGGCAGGCTTGGGG+AGG | + | chr5_4:3717714-3717733 | None:intergenic | 60.0% | |
| CCAGCAGCAGTTGCCGTTCT+TGG | + | chr5_4:3717762-3717781 | None:intergenic | 60.0% | |
| CCAAGAACGGCAACTGCTGC+TGG | - | chr5_4:3717759-3717778 | Msa0830660:intron | 60.0% | |
| AAGGCAGGCTTGGGGAGGCC+AGG | + | chr5_4:3717709-3717728 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 3709995 | 3718110 | 3709995 | ID=Msa0830660;Name=Msa0830660 |
| chr5_4 | mRNA | 3709995 | 3718110 | 3709995 | ID=Msa0830660-mRNA-1;Parent=Msa0830660;Name=Msa0830660-mRNA-1;_AED=0.12;_eAED=0.13;_QI=221|0.8|0.90|1|1|1|11|369|297 |
| chr5_4 | exon | 3709995 | 3710402 | 3709995 | ID=Msa0830660-mRNA-1:exon:1477;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3712533 | 3712610 | 3712533 | ID=Msa0830660-mRNA-1:exon:1476;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3712708 | 3712780 | 3712708 | ID=Msa0830660-mRNA-1:exon:1475;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3713203 | 3713283 | 3713203 | ID=Msa0830660-mRNA-1:exon:1474;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3714630 | 3714680 | 3714630 | ID=Msa0830660-mRNA-1:exon:1473;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3714823 | 3714917 | 3714823 | ID=Msa0830660-mRNA-1:exon:1472;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3715347 | 3715431 | 3715347 | ID=Msa0830660-mRNA-1:exon:1471;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3716428 | 3716507 | 3716428 | ID=Msa0830660-mRNA-1:exon:1470;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3716600 | 3716714 | 3716600 | ID=Msa0830660-mRNA-1:exon:1469;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3717606 | 3717698 | 3717606 | ID=Msa0830660-mRNA-1:exon:1468;Parent=Msa0830660-mRNA-1 |
| chr5_4 | exon | 3717786 | 3718110 | 3717786 | ID=Msa0830660-mRNA-1:exon:1467;Parent=Msa0830660-mRNA-1 |
| chr5_4 | five_prime_UTR | 3717890 | 3718110 | 3717890 | ID=Msa0830660-mRNA-1:five_prime_utr;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3717786 | 3717889 | 3717786 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3717606 | 3717698 | 3717606 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3716600 | 3716714 | 3716600 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3716428 | 3716507 | 3716428 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3715347 | 3715431 | 3715347 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3714823 | 3714917 | 3714823 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3714630 | 3714680 | 3714630 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3713203 | 3713283 | 3713203 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3712708 | 3712780 | 3712708 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3712533 | 3712610 | 3712533 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | CDS | 3710364 | 3710402 | 3710364 | ID=Msa0830660-mRNA-1:cds;Parent=Msa0830660-mRNA-1 |
| chr5_4 | three_prime_UTR | 3709995 | 3710363 | 3709995 | ID=Msa0830660-mRNA-1:three_prime_utr;Parent=Msa0830660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
