Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447470 | sp|Q9ZPI1|SYKC_ARATH | 70.304 | 559 | 152 | 7 | 11 | 568 | 70 | 615 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447470 | A0A445HG96 | 80.000 | 545 | 104 | 4 | 20 | 564 | 60 | 599 | 0.0 | 917 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095210 | Msa1447470 | -0.805169 | 1.519532e-49 | -8.615850e-47 |
| Msa1358840 | Msa1447470 | 0.925402 | 1.926904e-90 | -8.615850e-47 |
| Msa1372460 | Msa1447470 | -0.808935 | 2.425118e-50 | -8.615850e-47 |
| Msa1386820 | Msa1447470 | -0.804764 | 1.847216e-49 | -8.615850e-47 |
| Msa1394060 | Msa1447470 | -0.821681 | 3.547799e-53 | -8.615850e-47 |
| Msa1394250 | Msa1447470 | -0.807385 | 5.186066e-50 | -8.615850e-47 |
| Msa1434860 | Msa1447470 | -0.805848 | 1.094830e-49 | -8.615850e-47 |
| Msa1447470 | Msa1456130 | 0.987147 | 3.197144e-169 | -8.615850e-47 |
| Msa0694810 | Msa1447470 | -0.800375 | 1.484728e-48 | -8.615850e-47 |
| Msa0788450 | Msa1447470 | -0.806623 | 7.519731e-50 | -8.615850e-47 |
| Msa0825570 | Msa1447470 | -0.805579 | 1.247221e-49 | -8.615850e-47 |
| Msa0826540 | Msa1447470 | -0.812363 | 4.401725e-51 | -8.615850e-47 |
| Msa0232160 | Msa1447470 | -0.803072 | 4.149808e-49 | -8.615850e-47 |
| Msa1086300 | Msa1447470 | -0.804022 | 2.636921e-49 | -8.615850e-47 |
| Msa1086360 | Msa1447470 | -0.801769 | 7.702834e-49 | -8.615850e-47 |
| Msa1086430 | Msa1447470 | -0.803892 | 2.805850e-49 | -8.615850e-47 |
| Msa1086660 | Msa1447470 | -0.803041 | 4.211878e-49 | -8.615850e-47 |
| Msa0268190 | Msa1447470 | -0.805555 | 1.261713e-49 | -8.615850e-47 |
| Msa0268370 | Msa1447470 | -0.816954 | 4.236084e-52 | -8.615850e-47 |
| Msa0268430 | Msa1447470 | -0.803213 | 3.880096e-49 | -8.615850e-47 |
| Msa0268530 | Msa1447470 | -0.820248 | 7.581896e-53 | -8.615850e-47 |
| Msa0268720 | Msa1447470 | -0.805601 | 1.233597e-49 | -8.615850e-47 |
| Msa0268860 | Msa1447470 | -0.810226 | 1.280800e-50 | -8.615850e-47 |
| Msa0268920 | Msa1447470 | -0.821114 | 4.795827e-53 | -8.615850e-47 |
| Msa0269070 | Msa1447470 | -0.806725 | 7.155829e-50 | -8.615850e-47 |
| Msa0310270 | Msa1447470 | -0.804565 | 2.032593e-49 | -8.615850e-47 |
| Msa0334480 | Msa1447470 | -0.805145 | 1.537497e-49 | -8.615850e-47 |
| Msa0335050 | Msa1447470 | 0.802421 | 5.655029e-49 | -8.615850e-47 |
| Msa0523990 | Msa1447470 | 0.801197 | 1.008860e-48 | -8.615850e-47 |
| Msa0565120 | Msa1447470 | 0.812973 | 3.237809e-51 | -8.615850e-47 |
| Msa0582540 | Msa1447470 | -0.804927 | 1.707500e-49 | -8.615850e-47 |
| Msa0582610 | Msa1447470 | -0.809155 | 2.175886e-50 | -8.615850e-47 |
| Msa0582720 | Msa1447470 | -0.818698 | 1.711509e-52 | -8.615850e-47 |
| Msa0582840 | Msa1447470 | -0.810411 | 1.168079e-50 | -8.615850e-47 |
| Msa0582890 | Msa1447470 | -0.807773 | 4.291125e-50 | -8.615850e-47 |
| Msa0924990 | Msa1447470 | -0.800942 | 1.137151e-48 | -8.615850e-47 |
| Msa0931130 | Msa1447470 | -0.805257 | 1.456357e-49 | -8.615850e-47 |
| Msa0931160 | Msa1447470 | -0.818406 | 1.993607e-52 | -8.615850e-47 |
| Msa0937180 | Msa1447470 | -0.800372 | 1.486853e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447470 | MtrunA17_Chr2g0298001 | 76.937 | 555 | 117 | 5 | 13 | 567 | 54 | 597 | 0.0 | 879 |
| Msa1447470 | MtrunA17_Chr4g0072181 | 95.467 | 375 | 16 | 1 | 174 | 547 | 1 | 375 | 0.0 | 737 |
| Msa1447470 | MtrunA17_Chr4g0072161 | 76.271 | 413 | 90 | 3 | 97 | 508 | 5 | 410 | 0.0 | 634 |
| Msa1447470 | MtrunA17_Chr4g0072141 | 86.875 | 320 | 42 | 0 | 252 | 571 | 1 | 320 | 0.0 | 594 |
| Msa1447470 | MtrunA17_Chr8g0335841 | 35.599 | 559 | 294 | 12 | 31 | 563 | 59 | 577 | 7.80e-104 | 324 |
| Msa1447470 | MtrunA17_Chr4g0072151 | 69.832 | 179 | 46 | 4 | 34 | 211 | 30 | 201 | 6.27e-71 | 228 |
| Msa1447470 | MtrunA17_Chr1g0150111 | 23.625 | 491 | 318 | 15 | 79 | 557 | 87 | 532 | 8.94e-23 | 102 |
| Msa1447470 | MtrunA17_Chr2g0308881 | 64.789 | 71 | 23 | 1 | 482 | 552 | 16 | 84 | 4.13e-22 | 91.7 |
| Msa1447470 | MtrunA17_Chr4g0072171 | 67.308 | 52 | 17 | 0 | 422 | 473 | 3 | 54 | 1.74e-17 | 76.6 |
| Msa1447470 | MtrunA17_Chr8g0391331 | 26.389 | 144 | 104 | 2 | 211 | 353 | 197 | 339 | 1.67e-12 | 70.5 |
| Msa1447470 | MtrunA17_Chr4g0025921 | 27.891 | 147 | 102 | 3 | 210 | 353 | 182 | 327 | 2.24e-12 | 69.7 |
| Msa1447470 | MtrunA17_Chr4g0067881 | 25.694 | 144 | 105 | 2 | 211 | 353 | 195 | 337 | 5.19e-12 | 68.6 |
| Msa1447470 | MtrunA17_Chr4g0025931 | 27.397 | 146 | 102 | 3 | 211 | 353 | 169 | 313 | 2.14e-11 | 66.6 |
| Msa1447470 | MtrunA17_Chr1g0211491 | 26.389 | 144 | 104 | 2 | 211 | 353 | 152 | 294 | 8.59e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447470 | AT3G11710.1 | 70.304 | 559 | 152 | 7 | 11 | 568 | 70 | 615 | 0.0 | 823 |
| Msa1447470 | AT3G13490.1 | 36.348 | 564 | 286 | 14 | 31 | 563 | 80 | 601 | 2.16e-101 | 319 |
| Msa1447470 | AT3G30805.1 | 79.245 | 53 | 11 | 0 | 505 | 557 | 71 | 123 | 9.73e-24 | 98.6 |
| Msa1447470 | AT4G26870.1 | 23.647 | 499 | 317 | 15 | 78 | 557 | 70 | 523 | 1.09e-20 | 96.3 |
| Msa1447470 | AT4G31180.1 | 22.466 | 592 | 376 | 22 | 5 | 557 | 2 | 549 | 7.08e-19 | 90.5 |
| Msa1447470 | AT4G31180.2 | 22.466 | 592 | 376 | 22 | 5 | 557 | 2 | 549 | 7.08e-19 | 90.5 |
| Msa1447470 | AT4G33760.1 | 27.211 | 147 | 105 | 2 | 208 | 353 | 196 | 341 | 1.83e-12 | 70.5 |
| Msa1447470 | AT4G33760.2 | 27.211 | 147 | 105 | 2 | 208 | 353 | 60 | 205 | 1.95e-12 | 70.1 |
Find 179 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTTATAATACAATATT+AGG | 0.163928 | tig0031750:-34658 | Msa1447470:three_prime_UTR |
| GCCAAAGGACTCATTATTTC+GGG | 0.196107 | tig0031750:+35860 | Msa1447470:intergenic |
| CAACTCCATTTGAATGATAT+TGG | 0.196418 | tig0031750:+36536 | Msa1447470:intergenic |
| TCCTTCAAAATATATGTTTC+AGG | 0.196607 | tig0031750:+38034 | Msa1447470:intergenic |
| CCAACTGGCGGTTGGGGTTT+GGG | 0.215630 | tig0031750:-35260 | Msa1447470:CDS |
| AAATTGCATGTAAATAATTT+AGG | 0.217907 | tig0031750:-34896 | Msa1447470:three_prime_UTR |
| ACCAACTGGCGGTTGGGGTT+TGG | 0.224391 | tig0031750:-35261 | Msa1447470:CDS |
| TTGAATATTTCTCGAACTTC+TGG | 0.228444 | tig0031750:+37126 | Msa1447470:intergenic |
| TAAATTATTTACATGCAATT+TGG | 0.233312 | tig0031750:+34898 | Msa1447470:intergenic |
| TGAAGATGTTTCTGTGTCTT+TGG | 0.264568 | tig0031750:-39261 | Msa1447470:CDS |
| CACCATCAAATTTGCATTAT+CGG | 0.265417 | tig0031750:+38174 | Msa1447470:intergenic |
| CCTTGATGACCGTGATTTCT+TGG | 0.266714 | tig0031750:-37067 | Msa1447470:CDS |
| TATCTCAAGCAGCTGGTTAT+TGG | 0.271777 | tig0031750:-36848 | Msa1447470:CDS |
| GGCCAAAGGACTCATTATTT+CGG | 0.289952 | tig0031750:+35859 | Msa1447470:intergenic |
| TCAGGATTCCTGGTACTTCC+TGG | 0.304810 | tig0031750:+38052 | Msa1447470:intergenic |
| GTCGGTGTCACTGGATTTCC+AGG | 0.307527 | tig0031750:-38521 | Msa1447470:intron |
| TGCTTTGTCCTCCTTTGATT+TGG | 0.317512 | tig0031750:-39715 | Msa1447470:five_prime_UTR |
| AAGATATCGTTCACGCCATT+TGG | 0.327737 | tig0031750:-37163 | Msa1447470:CDS |
| AGACAGAACTATAAAATTCT+TGG | 0.329623 | tig0031750:+38243 | Msa1447470:intergenic |
| ACCAAACCATTCGGTTTAAT+CGG | 0.332257 | tig0031750:+40161 | Msa1447470:intergenic |
| GCAGCTGGTTATTGGTGGGC+TGG | 0.333137 | tig0031750:-36840 | Msa1447470:CDS |
| TCCTCACTGGCCAAGTCCTT+TGG | 0.335575 | tig0031750:+36333 | Msa1447470:intergenic |
| AGCAGCAGCAGACTCTTGTT+TGG | 0.336308 | tig0031750:+38201 | Msa1447470:intergenic |
| TGCATAAAATAAGCAATGTC+TGG | 0.341603 | tig0031750:+40063 | Msa1447470:intergenic |
| AAACAAAAGGTTTCTACCTT+GGG | 0.345110 | tig0031750:+39902 | Msa1447470:intergenic |
| TATGCCACCAACTGGCGGTT+GGG | 0.346260 | tig0031750:-35267 | Msa1447470:CDS |
| GATGTTTCTGTGTCTTTGGC+TGG | 0.346939 | tig0031750:-39257 | Msa1447470:intron |
| AATATATGTTTCAGGATTCC+TGG | 0.356980 | tig0031750:+38042 | Msa1447470:intergenic |
| TCCTTTGATTTGGTTGGTAA+TGG | 0.357585 | tig0031750:-39705 | Msa1447470:exon |
| AGTGCAAAATTCCTCGTCTA+AGG | 0.358905 | tig0031750:+35304 | Msa1447470:intergenic |
| TGACTCCAAGGTCCAGATTA+TGG | 0.365653 | tig0031750:-39087 | Msa1447470:CDS |
| CTTACAGTATTCGCGGTTGC+CGG | 0.369036 | tig0031750:+39653 | Msa1447470:intergenic |
| TTGACTTGGGAACCAAGTTT+TGG | 0.376470 | tig0031750:+39851 | Msa1447470:intergenic |
| GTTGGGGTTTGGGTATTGAT+AGG | 0.380474 | tig0031750:-35250 | Msa1447470:CDS |
| ACCTTGCATCAGCCATAATC+TGG | 0.381672 | tig0031750:+39075 | Msa1447470:intergenic |
| AATCTCTGACGCTGCACAAC+AGG | 0.381681 | tig0031750:+35639 | Msa1447470:intergenic |
| AGGTACATCTTGAGGTTTCA+TGG | 0.381888 | tig0031750:+35089 | Msa1447470:intergenic |
| GATTGAGGAACTAGAGAGTA+TGG | 0.382971 | tig0031750:-36370 | Msa1447470:CDS |
| GACAGAACTATAAAATTCTT+GGG | 0.388826 | tig0031750:+38244 | Msa1447470:intergenic |
| GCAGCAGCAGACTCTTGTTT+GGG | 0.392009 | tig0031750:+38202 | Msa1447470:intergenic |
| GGAGGACAAAGCAACTAAAC+AGG | 0.392257 | tig0031750:+39725 | Msa1447470:intergenic |
| AGTATATAGAAATGAGAGTA+TGG | 0.401531 | tig0031750:-36795 | Msa1447470:CDS |
| CCCACTCCCCAGCCAAAACT+TGG | 0.403560 | tig0031750:-39863 | Msa1447470:five_prime_UTR |
| GTTAAGGCCATACGCACTTC+AGG | 0.404660 | tig0031750:-39146 | Msa1447470:CDS |
| TTTGACATTGTCGGTGTCAC+TGG | 0.407314 | tig0031750:-38530 | Msa1447470:CDS |
| CTCCTAATCTTAATCCTACT+TGG | 0.413171 | tig0031750:+34749 | Msa1447470:intergenic |
| TAGACTTCACTCCACCCTTC+AGG | 0.413847 | tig0031750:-36495 | Msa1447470:intron |
| GACAAACAATTCAAAACGTT+CGG | 0.414822 | tig0031750:+35808 | Msa1447470:intergenic |
| TCAAACCACTGCTCGGTTGT+TGG | 0.419167 | tig0031750:-36253 | Msa1447470:CDS |
| GGGAATTGAAGAAGATTTGA+AGG | 0.420265 | tig0031750:-39789 | Msa1447470:five_prime_UTR |
| ACCGATTAAACCGAATGGTT+TGG | 0.421215 | tig0031750:-40162 | Msa1447470:five_prime_UTR |
| TTGATCATATTGCAGCTTGT+AGG | 0.421852 | tig0031750:-35932 | Msa1447470:intron |
| GCATATGAGGATCGGCAATC+GGG | 0.428202 | tig0031750:-35344 | Msa1447470:intron |
| AAAACAAAAGGTTTCTACCT+TGG | 0.429636 | tig0031750:+39901 | Msa1447470:intergenic |
| ATGATATCTTCTTCATCATC+AGG | 0.430923 | tig0031750:+39537 | Msa1447470:intergenic |
| CTCAAGCAGCTGGTTATTGG+TGG | 0.432009 | tig0031750:-36845 | Msa1447470:CDS |
| AAAATCCAATATCATTCAAA+TGG | 0.432612 | tig0031750:-36541 | Msa1447470:CDS |
| CAGCTGGTTATTGGTGGGCT+GGG | 0.434162 | tig0031750:-36839 | Msa1447470:CDS |
| TATAGCTTCCATTTGTAAGT+TGG | 0.436164 | tig0031750:+36563 | Msa1447470:intergenic |
| CGCCGATAATGCAAATTTGA+TGG | 0.437048 | tig0031750:-38176 | Msa1447470:intron |
| CTGGGTCGTGTTTATGAAAT+CGG | 0.437305 | tig0031750:-36821 | Msa1447470:CDS |
| AACCTGCATCCGATCCAATC+TGG | 0.438078 | tig0031750:+40199 | Msa1447470:intergenic |
| CAATACATTGATACATATCA+AGG | 0.438267 | tig0031750:-39308 | Msa1447470:CDS |
| CAAGATGTACCTTCAGCTAA+AGG | 0.438689 | tig0031750:-35078 | Msa1447470:intron |
| ACAGAGAATTTGTGTGGATA+GGG | 0.441765 | tig0031750:+39347 | Msa1447470:intergenic |
| CTATGTATTAGGCCGAGTTA+AGG | 0.446189 | tig0031750:-39162 | Msa1447470:intron |
| TGCATATGAGGATCGGCAAT+CGG | 0.447959 | tig0031750:-35345 | Msa1447470:intron |
| CCTATGATGATCAAGATTGC+CGG | 0.452143 | tig0031750:-36950 | Msa1447470:CDS |
| TTGTCCTCCTTTGATTTGGT+TGG | 0.452587 | tig0031750:-39711 | Msa1447470:five_prime_UTR |
| ATTGTTTACCAACTTACAAA+TGG | 0.453702 | tig0031750:-36571 | Msa1447470:CDS |
| TTAAACCGAATGGTTTGGTC+TGG | 0.455590 | tig0031750:-40157 | Msa1447470:five_prime_UTR |
| TTTCCTCTGTTATCTCCATC+AGG | 0.456139 | tig0031750:+36708 | Msa1447470:intergenic |
| CCGGCAATCTTGATCATCAT+AGG | 0.457344 | tig0031750:+36950 | Msa1447470:intergenic |
| TGCAGCAATACCGTGAGAAC+AGG | 0.459033 | tig0031750:-39409 | Msa1447470:intron |
| CTCCAAGTAGGATTAAGATT+AGG | 0.459586 | tig0031750:-34751 | Msa1447470:three_prime_UTR |
| CCCCGAAATAATGAGTCCTT+TGG | 0.462367 | tig0031750:-35861 | Msa1447470:CDS |
| TTAATCCTCATGAGTTGGTA+TGG | 0.470872 | tig0031750:+40036 | Msa1447470:intergenic |
| ATGCCACCAACTGGCGGTTG+GGG | 0.472904 | tig0031750:-35266 | Msa1447470:CDS |
| TCAAAACGTTCGGTCAGGCC+TGG | 0.476366 | tig0031750:+35818 | Msa1447470:intergenic |
| TTATACACAGATTGTTGACT+TGG | 0.477707 | tig0031750:+39837 | Msa1447470:intergenic |
| GAGTATGGTATGCCACCAAC+TGG | 0.483125 | tig0031750:-35275 | Msa1447470:CDS |
| TGGACGAGCTGCTGCTCCAC+CGG | 0.485920 | tig0031750:+36931 | Msa1447470:intergenic |
| GTAGAATAGTTAAATACATT+CGG | 0.486909 | tig0031750:-37095 | Msa1447470:CDS |
| ATTATCTGTAGGGAAATCAA+TGG | 0.489576 | tig0031750:-38078 | Msa1447470:intron |
| GACTGATTCACAGAACATAA+AGG | 0.490806 | tig0031750:-35213 | Msa1447470:intron |
| GGGTGATTCATGATGAATGT+AGG | 0.490979 | tig0031750:+35881 | Msa1447470:intergenic |
| GGCCAGATTGGATCGGATGC+AGG | 0.492924 | tig0031750:-40201 | Msa1447470:five_prime_UTR |
| TCATTGTGATGAGTTACAAA+TGG | 0.493670 | tig0031750:+36911 | Msa1447470:intergenic |
| TGATGACCGTGATTTCTTGG+AGG | 0.494735 | tig0031750:-37064 | Msa1447470:intron |
| TTCGCGGTTGCCGGAGGTAT+AGG | 0.495918 | tig0031750:+39662 | Msa1447470:intergenic |
| ACTTAGTATTCCAAAGGACT+TGG | 0.497785 | tig0031750:-36343 | Msa1447470:CDS |
| AACAACCGAGCAGTGGTTTG+AGG | 0.500335 | tig0031750:+36255 | Msa1447470:intergenic |
| GGGATGCAGGAGTTCTGACT+TGG | 0.501279 | tig0031750:-38594 | Msa1447470:intron |
| GGGGTCTACGCTTTGACGAA+GGG | 0.503971 | tig0031750:+39922 | Msa1447470:intergenic |
| CAGGAGGATTGATATGATTG+AGG | 0.507601 | tig0031750:-36385 | Msa1447470:CDS |
| GTGAAGCGATTTGACATTGT+CGG | 0.511317 | tig0031750:-38539 | Msa1447470:CDS |
| CAAAATGTCCAGGGAAAAGT+AGG | 0.512608 | tig0031750:-38288 | Msa1447470:intron |
| AGCTGCTTGAGATAAAGTTC+TGG | 0.514028 | tig0031750:+36857 | Msa1447470:intergenic |
| AAACCCCAACCGCCAGTTGG+TGG | 0.516970 | tig0031750:+35263 | Msa1447470:intergenic |
| ACAACCGAGCAGTGGTTTGA+GGG | 0.518422 | tig0031750:+36256 | Msa1447470:intergenic |
| AAGACACAGAAACATCTTCA+AGG | 0.518887 | tig0031750:+39264 | Msa1447470:intergenic |
| TAAAACCAGACCAAACCATT+CGG | 0.519859 | tig0031750:+40152 | Msa1447470:intergenic |
| CGTAGTGAACTCAGGATTGT+GGG | 0.520747 | tig0031750:+36766 | Msa1447470:intergenic |
| AGAACTTTATCTCAAGCAGC+TGG | 0.526651 | tig0031750:-36855 | Msa1447470:CDS |
| AACAGAGAATTTGTGTGGAT+AGG | 0.528591 | tig0031750:+39346 | Msa1447470:intergenic |
| ATTGTTGTAAATATGTCAGA+AGG | 0.529670 | tig0031750:-39377 | Msa1447470:CDS |
| CGAGTTACTTACAGTATTCG+CGG | 0.530285 | tig0031750:+39646 | Msa1447470:intergenic |
| ACAATTCAAAACGTTCGGTC+AGG | 0.532125 | tig0031750:+35813 | Msa1447470:intergenic |
| TGGGGTCTACGCTTTGACGA+AGG | 0.533736 | tig0031750:+39921 | Msa1447470:intergenic |
| GCATAAAATAAGCAATGTCT+GGG | 0.544432 | tig0031750:+40064 | Msa1447470:intergenic |
| CCAAGAAATCACGGTCATCA+AGG | 0.544842 | tig0031750:+37067 | Msa1447470:intergenic |
| GTTATGTAATTACTCCAAGT+AGG | 0.545929 | tig0031750:-34763 | Msa1447470:three_prime_UTR |
| CTTTGCACCTGAAGTGCGTA+TGG | 0.545950 | tig0031750:+39139 | Msa1447470:intergenic |
| GATGCAACATCAAATCCAAA+TGG | 0.546459 | tig0031750:+37148 | Msa1447470:intergenic |
| TAGGGAAATCAATGGGTACC+AGG | 0.548143 | tig0031750:-38070 | Msa1447470:CDS |
| TTAGCTGAAGGTACATCTTG+AGG | 0.550400 | tig0031750:+35081 | Msa1447470:intergenic |
| TATCAAGGGTTAATAAGCAA+TGG | 0.550622 | tig0031750:-39293 | Msa1447470:CDS |
| GCTCTGTGCGACTTGGCCAA+AGG | 0.551396 | tig0031750:+35845 | Msa1447470:intergenic |
| TCAAGCAGCTGGTTATTGGT+GGG | 0.555894 | tig0031750:-36844 | Msa1447470:CDS |
| GTATGCCACCAACTGGCGGT+TGG | 0.559429 | tig0031750:-35268 | Msa1447470:CDS |
| AGGTCATAGTAATCCGCAAA+CGG | 0.562291 | tig0031750:+36728 | Msa1447470:intergenic |
| TGAGTTCTATATGCCGTTTG+CGG | 0.563867 | tig0031750:-36741 | Msa1447470:CDS |
| TTATCTGTAGGGAAATCAAT+GGG | 0.564495 | tig0031750:-38077 | Msa1447470:intron |
| CAGGAGTTCTGACTTGGATG+TGG | 0.565232 | tig0031750:-38588 | Msa1447470:CDS |
| AATGGGTACCAGGAAGTACC+AGG | 0.565872 | tig0031750:-38060 | Msa1447470:CDS |
| CTCTACATAGATAGAGAGAA+GGG | 0.568049 | tig0031750:-39809 | Msa1447470:five_prime_UTR |
| TTCGTCGGAGCCTATACCTC+CGG | 0.568400 | tig0031750:-39672 | Msa1447470:CDS |
| GAGGAACTAGAGAGTATGGC+AGG | 0.570470 | tig0031750:-36366 | Msa1447470:CDS |
| TGTCCAGGGAAAAGTAGGAC+AGG | 0.571761 | tig0031750:-38283 | Msa1447470:intron |
| TATACACAGATTGTTGACTT+GGG | 0.580664 | tig0031750:+39838 | Msa1447470:intergenic |
| CCCAAACCCCAACCGCCAGT+TGG | 0.580695 | tig0031750:+35260 | Msa1447470:intergenic |
| TCCATTACCAACCAAATCAA+AGG | 0.583127 | tig0031750:+39704 | Msa1447470:intergenic |
| ATCAGCCATAATCTGGACCT+TGG | 0.584667 | tig0031750:+39082 | Msa1447470:intergenic |
| AAGTCGCACAGAGCAAAACC+AGG | 0.586814 | tig0031750:-35836 | Msa1447470:CDS |
| AACAAAAGGTTTCTACCTTG+GGG | 0.589245 | tig0031750:+39903 | Msa1447470:intergenic |
| TTGTTGTAAATATGTCAGAA+GGG | 0.589247 | tig0031750:-39376 | Msa1447470:CDS |
| GAGATTTGCTCAACAACTCA+AGG | 0.591967 | tig0031750:-35622 | Msa1447470:intron |
| AATGGAAGCTACTACTTCGT+CGG | 0.592260 | tig0031750:-39687 | Msa1447470:CDS |
| AACTCACACGTAGTGAACTC+AGG | 0.593455 | tig0031750:+36758 | Msa1447470:intergenic |
| TATACTTAAGCCTGTTCTCA+CGG | 0.594709 | tig0031750:+39399 | Msa1447470:intergenic |
| CATATGAGGATCGGCAATCG+GGG | 0.594885 | tig0031750:-35343 | Msa1447470:intron |
| ATTCAACCGATTAAACCGAA+TGG | 0.595612 | tig0031750:-40167 | Msa1447470:five_prime_UTR |
| TGCGGATTACTATGACCTGA+TGG | 0.598373 | tig0031750:-36723 | Msa1447470:CDS |
| GGGTCTACGCTTTGACGAAG+GGG | 0.598959 | tig0031750:+39923 | Msa1447470:intergenic |
| ACGTAGTGAACTCAGGATTG+TGG | 0.602745 | tig0031750:+36765 | Msa1447470:intergenic |
| ACTCTACATAGATAGAGAGA+AGG | 0.603039 | tig0031750:-39810 | Msa1447470:five_prime_UTR |
| GGAGTGAAGTCTATTTCGAT+AGG | 0.608418 | tig0031750:+36505 | Msa1447470:intergenic |
| CAACCGAGCAGTGGTTTGAG+GGG | 0.610155 | tig0031750:+36257 | Msa1447470:intergenic |
| ATTGAGAATCAAATAAACAG+TGG | 0.610196 | tig0031750:-34858 | Msa1447470:three_prime_UTR |
| AACAAACCTCCAAGAAATCA+CGG | 0.611443 | tig0031750:+37058 | Msa1447470:intergenic |
| AGAAGATATCATCGACCCAA+AGG | 0.612145 | tig0031750:-39526 | Msa1447470:intron |
| ACAGTATTCGCGGTTGCCGG+AGG | 0.612564 | tig0031750:+39656 | Msa1447470:intergenic |
| AATACATTGATACATATCAA+GGG | 0.612680 | tig0031750:-39307 | Msa1447470:CDS |
| ATATTGATTAGCTTCCTCAC+TGG | 0.615270 | tig0031750:+36320 | Msa1447470:intergenic |
| GGCAGGACTTAGTATTCCAA+AGG | 0.618859 | tig0031750:-36349 | Msa1447470:CDS |
| TCCAAAGGACTTGGCCAGTG+AGG | 0.621171 | tig0031750:-36334 | Msa1447470:CDS |
| TCCAGATTATGGCTGATGCA+AGG | 0.622344 | tig0031750:-39076 | Msa1447470:intron |
| AAGTTTACACTGCACCTGAA+GGG | 0.626239 | tig0031750:+36481 | Msa1447470:intergenic |
| GTATGGCGATGATGACTCCA+AGG | 0.633058 | tig0031750:-39099 | Msa1447470:CDS |
| ATAGAAACAGAGAATTTGTG+TGG | 0.634714 | tig0031750:+39341 | Msa1447470:intergenic |
| TTTATCCAACAACCGAGCAG+TGG | 0.636466 | tig0031750:+36248 | Msa1447470:intergenic |
| CATCAAATTTGCATTATCGG+CGG | 0.641339 | tig0031750:+38177 | Msa1447470:intergenic |
| ACAGAACTATAAAATTCTTG+GGG | 0.642759 | tig0031750:+38245 | Msa1447470:intergenic |
| TGAAGCGATGGCCTTAGACG+AGG | 0.643931 | tig0031750:-35315 | Msa1447470:CDS |
| TCATTCAAATGGAGTTGACA+AGG | 0.648922 | tig0031750:-36530 | Msa1447470:CDS |
| TTTACACTGCACCTGAAGGG+TGG | 0.653330 | tig0031750:+36484 | Msa1447470:intergenic |
| ATGATGATCAAGATTGCCGG+TGG | 0.655443 | tig0031750:-36947 | Msa1447470:CDS |
| AACCGAGCAGTGGTTTGAGG+GGG | 0.655651 | tig0031750:+36258 | Msa1447470:intergenic |
| AAGTGCGTATGGCCTTAACT+CGG | 0.656149 | tig0031750:+39150 | Msa1447470:intergenic |
| ATATCTTCTTCATCATCAGG+TGG | 0.657071 | tig0031750:+39540 | Msa1447470:intergenic |
| ATTGTCCATACCAACTCATG+AGG | 0.659835 | tig0031750:-40041 | Msa1447470:five_prime_UTR |
| ATTACCAACCAAATCAAAGG+AGG | 0.671530 | tig0031750:+39707 | Msa1447470:intergenic |
| CCAAAGGACTCATTATTTCG+GGG | 0.676230 | tig0031750:+35861 | Msa1447470:intergenic |
| TATGGTATGCCACCAACTGG+CGG | 0.678899 | tig0031750:-35272 | Msa1447470:CDS |
| GCACAAAGCATCTGAAAACG+AGG | 0.682780 | tig0031750:+34717 | Msa1447470:intergenic |
| ATATGAGGATCGGCAATCGG+GGG | 0.690590 | tig0031750:-35342 | Msa1447470:intron |
| GAGGACAAAGCAACTAAACA+GGG | 0.704089 | tig0031750:+39726 | Msa1447470:intergenic |
| ATAACAGAGGAAATGTTGAG+CGG | 0.717216 | tig0031750:-36698 | Msa1447470:intron |
| TGACCTGATGGAGATAACAG+AGG | 0.722590 | tig0031750:-36711 | Msa1447470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTGTTTTTTTTTG+TGG | - | tig0031750:34746-34765 | Msa1447470:three_prime_UTR | 10.0% |
| !! | AATATAATACAAAAAACAAA+AGG | + | tig0031750:34962-34981 | Msa1447470:intergenic | 10.0% |
| !! | AGAAAAATAAAATAATTCAT+TGG | - | tig0031750:38730-38749 | Msa1447470:intron | 10.0% |
| !! | TCTATTTATAATACAATATT+AGG | - | tig0031750:40190-40209 | Msa1447470:five_prime_UTR | 10.0% |
| !! | TTTACGAAAAAATATCTTAA+GGG | + | tig0031750:34890-34909 | Msa1447470:intergenic | 15.0% |
| !!! | TTTTACGAAAAAATATCTTA+AGG | + | tig0031750:34891-34910 | Msa1447470:intergenic | 15.0% |
| !! | ATAATTTACAAAAACACAAA+GGG | + | tig0031750:35894-35913 | Msa1447470:intergenic | 15.0% |
| !! | AATAATTTACAAAAACACAA+AGG | + | tig0031750:35895-35914 | Msa1447470:intergenic | 15.0% |
| !! | ACAACTAAATATAAATTAAG+AGG | - | tig0031750:36012-36031 | Msa1447470:intron | 15.0% |
| !! | TTAAAAAAAGAAATGGAATA+GGG | + | tig0031750:36190-36209 | Msa1447470:intergenic | 15.0% |
| !! | ATTAAAAAAAGAAATGGAAT+AGG | + | tig0031750:36191-36210 | Msa1447470:intergenic | 15.0% |
| !!! | AAAATTTAAAATGATAGGAT+AGG | + | tig0031750:36472-36491 | Msa1447470:intergenic | 15.0% |
| !! | TTATTTCATTAATTATCTGT+AGG | - | tig0031750:36759-36778 | Msa1447470:CDS | 15.0% |
| !! | TATTTCATTAATTATCTGTA+GGG | - | tig0031750:36760-36779 | Msa1447470:CDS | 15.0% |
| !! | CTAGAAAATAAGATAATATA+GGG | + | tig0031750:36894-36913 | Msa1447470:intergenic | 15.0% |
| !! | TTGAAAATAAAGCATATTAT+AGG | + | tig0031750:38653-38672 | Msa1447470:intergenic | 15.0% |
| !! | TAGTAAAAAAGTTAAGATAT+TGG | - | tig0031750:38786-38805 | Msa1447470:intron | 15.0% |
| !!! | TTTGTAAATTCTTACATTTT+TGG | - | tig0031750:39696-39715 | Msa1447470:exon | 15.0% |
| !! | ATCTAAATAAACATAAAAGA+AGG | + | tig0031750:39817-39836 | Msa1447470:intergenic | 15.0% |
| !! | TAAATTATTTACATGCAATT+TGG | + | tig0031750:39953-39972 | Msa1447470:intergenic | 15.0% |
| !! | AAATTGCATGTAAATAATTT+AGG | - | tig0031750:39952-39971 | Msa1447470:five_prime_UTR | 15.0% |
| !!! | AAAATTGTTTTTTTTTGTGG+CGG | - | tig0031750:34749-34768 | Msa1447470:three_prime_UTR | 20.0% |
| !! | AATACATTGATACATATCAA+GGG | - | tig0031750:35541-35560 | Msa1447470:intron | 20.0% |
| !! | AAAATTGTTGAAATAGAAAC+CGG | + | tig0031750:35627-35646 | Msa1447470:intergenic | 20.0% |
| !! | TATTTGTCTTTCTATGTATT+AGG | - | tig0031750:35675-35694 | Msa1447470:intron | 20.0% |
| !! | ACACGAAATTTACATAAAAA+TGG | - | tig0031750:35865-35884 | Msa1447470:CDS | 20.0% |
| !! | ATCCATTATGTTGTATAAAA+TGG | - | tig0031750:35919-35938 | Msa1447470:CDS | 20.0% |
| !!! | TTCCATTTTATACAACATAA+TGG | + | tig0031750:35924-35943 | Msa1447470:intergenic | 20.0% |
| !! | ACTAAATATAAATTAAGAGG+TGG | - | tig0031750:36015-36034 | Msa1447470:intron | 20.0% |
| !! | AATAATTAGTACTTGCAATA+AGG | - | tig0031750:36492-36511 | Msa1447470:intron | 20.0% |
| !! | CCTAGAAAATAAGATAATAT+AGG | + | tig0031750:36895-36914 | Msa1447470:intergenic | 20.0% |
| !!! | CCTATATTATCTTATTTTCT+AGG | - | tig0031750:36892-36911 | Msa1447470:CDS | 20.0% |
| !!! | CAATAACTTTCTTTTTTTCA+AGG | + | tig0031750:37109-37128 | Msa1447470:intergenic | 20.0% |
| !!! | AGAAATTAATTTGCAAACTT+TGG | + | tig0031750:37250-37269 | Msa1447470:intergenic | 20.0% |
| !!! | TACAACTCATTATCTTTTAT+AGG | - | tig0031750:37658-37677 | Msa1447470:intron | 20.0% |
| !! | GTAGAATAGTTAAATACATT+CGG | - | tig0031750:37753-37772 | Msa1447470:intron | 20.0% |
| !! | AAAATCCAATATCATTCAAA+TGG | - | tig0031750:38307-38326 | Msa1447470:intron | 20.0% |
| !! | AGTTAAGATATTGGATTAAA+AGG | - | tig0031750:38795-38814 | Msa1447470:intron | 20.0% |
| !!! | TCTCTTCTGATTTTATTTTA+AGG | - | tig0031750:39280-39299 | Msa1447470:CDS | 20.0% |
| !!! | CTCTTCTGATTTTATTTTAA+GGG | - | tig0031750:39281-39300 | Msa1447470:CDS | 20.0% |
| !! | TATGTAGAAAAGATTTACAT+TGG | + | tig0031750:39315-39334 | Msa1447470:intergenic | 20.0% |
| !!! | TGTAATTTGTATGCATTATT+AGG | + | tig0031750:39439-39458 | Msa1447470:intergenic | 20.0% |
| !! | TGCATAATAGAATAACTAAT+TGG | - | tig0031750:39469-39488 | Msa1447470:intron | 20.0% |
| !!! | TAGTTTTTTTCTTTTTTGAG+TGG | - | tig0031750:40032-40051 | Msa1447470:five_prime_UTR | 20.0% |
| !!! | TTTTTTTAATCCTCATGAGT+TGG | + | tig0031750:34820-34839 | Msa1447470:intergenic | 25.0% |
| !!! | AATTTTATTTCGCTCTTCAT+AGG | - | tig0031750:35274-35293 | Msa1447470:CDS | 25.0% |
| ! | CAATCATATACTATTATCGT+TGG | - | tig0031750:35374-35393 | Msa1447470:intron | 25.0% |
| ! | TTAACTTATGTCGATGAATT+TGG | + | tig0031750:35400-35419 | Msa1447470:intergenic | 25.0% |
| ! | ATTGTTGTAAATATGTCAGA+AGG | - | tig0031750:35471-35490 | Msa1447470:intron | 25.0% |
| ! | TTGTTGTAAATATGTCAGAA+GGG | - | tig0031750:35472-35491 | Msa1447470:intron | 25.0% |
| ! | CAATACATTGATACATATCA+AGG | - | tig0031750:35540-35559 | Msa1447470:intron | 25.0% |
| !! | GATTTATATTTTCCCTTTAC+TGG | + | tig0031750:35828-35847 | Msa1447470:intergenic | 25.0% |
| ! | GTAAAGGGAAAATATAAATC+TGG | - | tig0031750:35828-35847 | Msa1447470:CDS | 25.0% |
| ! | AACATTAAGGTAAGATAAGA+AGG | + | tig0031750:36074-36093 | Msa1447470:intergenic | 25.0% |
| ! | ACAAAGTTAGTCAAACATTA+AGG | + | tig0031750:36087-36106 | Msa1447470:intergenic | 25.0% |
| ! | TAATGTTTGACTAACTTTGT+AGG | - | tig0031750:36087-36106 | Msa1447470:intron | 25.0% |
| ! | ACTAAAACAAGTTATATCTC+TGG | - | tig0031750:36233-36252 | Msa1447470:intron | 25.0% |
| ! | CTAAAACAAGTTATATCTCT+GGG | - | tig0031750:36234-36253 | Msa1447470:intron | 25.0% |
| !!! | TCTTATTTTATTTCCCTTCT+TGG | - | tig0031750:36403-36422 | Msa1447470:intron | 25.0% |
| !!! | CTTATTTTATTTCCCTTCTT+GGG | - | tig0031750:36404-36423 | Msa1447470:intron | 25.0% |
| ! | ACAGAACTATAAAATTCTTG+GGG | + | tig0031750:36606-36625 | Msa1447470:intergenic | 25.0% |
| ! | GACAGAACTATAAAATTCTT+GGG | + | tig0031750:36607-36626 | Msa1447470:intergenic | 25.0% |
| ! | AGACAGAACTATAAAATTCT+TGG | + | tig0031750:36608-36627 | Msa1447470:intergenic | 25.0% |
| !!! | TCCTGAAACATATATTTTGA+AGG | - | tig0031750:36813-36832 | Msa1447470:CDS | 25.0% |
| ! | TCCTTCAAAATATATGTTTC+AGG | + | tig0031750:36817-36836 | Msa1447470:intergenic | 25.0% |
| !!! | AACATATATTTTGAAGGATC+AGG | - | tig0031750:36819-36838 | Msa1447470:CDS | 25.0% |
| ! | AGCAATGAAAGAAAATATCA+AGG | + | tig0031750:36865-36884 | Msa1447470:intergenic | 25.0% |
| ! | TCAAGCAGATGATAATTAAA+TGG | - | tig0031750:36923-36942 | Msa1447470:CDS | 25.0% |
| !! | TGCAATATATCTTCCATTTT+TGG | - | tig0031750:36985-37004 | Msa1447470:intron | 25.0% |
| !!! | AATATATCTTCCATTTTTGG+TGG | - | tig0031750:36988-37007 | Msa1447470:intron | 25.0% |
| ! | TAAGCATATAGACGTATTTA+AGG | - | tig0031750:37143-37162 | Msa1447470:CDS | 25.0% |
| ! | AAGCATATAGACGTATTTAA+GGG | - | tig0031750:37144-37163 | Msa1447470:CDS | 25.0% |
| ! | TGGAAAACAGAAATTGAAAA+CGG | + | tig0031750:37230-37249 | Msa1447470:intergenic | 25.0% |
| !! | TGATTGGTTAAAATTCACAT+GGG | + | tig0031750:37529-37548 | Msa1447470:intergenic | 25.0% |
| !! | TTGATTGGTTAAAATTCACA+TGG | + | tig0031750:37530-37549 | Msa1447470:intergenic | 25.0% |
| ! | TAGTGAAAAGAAAAGGTAAA+TGG | + | tig0031750:37862-37881 | Msa1447470:intergenic | 25.0% |
| ! | AGTATATAGAAATGAGAGTA+TGG | - | tig0031750:38053-38072 | Msa1447470:CDS | 25.0% |
| ! | TTGTAGTTAATCTCAATATG+CGG | - | tig0031750:38238-38257 | Msa1447470:CDS | 25.0% |
| ! | ATTGTTTACCAACTTACAAA+TGG | - | tig0031750:38277-38296 | Msa1447470:CDS | 25.0% |
| !!! | TTCTTTTTTTATCCAAAAGC+AGG | - | tig0031750:38675-38694 | Msa1447470:intron | 25.0% |
| ! | TCAATTTCAACAATGGAAAA+GGG | + | tig0031750:38708-38727 | Msa1447470:intergenic | 25.0% |
| ! | TTTCTTCTCAATTTCAACAA+TGG | + | tig0031750:38715-38734 | Msa1447470:intergenic | 25.0% |
| ! | GATAGAGTAAAATATCAGAT+CGG | + | tig0031750:38825-38844 | Msa1447470:intergenic | 25.0% |
| ! | TCAAATGACTAAAATATCAG+TGG | + | tig0031750:38868-38887 | Msa1447470:intergenic | 25.0% |
| ! | AGTCATTTGATTAATAAGCT+TGG | - | tig0031750:38878-38897 | Msa1447470:intron | 25.0% |
| !!! | TTACATTTTTGGTTCCTTTT+GGG | - | tig0031750:39707-39726 | Msa1447470:exon | 25.0% |
| ! | TAGATATATGTTTCTCATGT+TGG | - | tig0031750:39832-39851 | Msa1447470:five_prime_UTR | 25.0% |
| !!! | ACACAATTCAATTTTTTCCT+AGG | - | tig0031750:39868-39887 | Msa1447470:five_prime_UTR | 25.0% |
| ! | ATTGAGAATCAAATAAACAG+TGG | - | tig0031750:39990-40009 | Msa1447470:five_prime_UTR | 25.0% |
| !!! | TTTTTTTCTTTTTTGAGTGG+TGG | - | tig0031750:40035-40054 | Msa1447470:five_prime_UTR | 25.0% |
| !!! | TGGTCTGGTTTTAATTACAT+TGG | - | tig0031750:34706-34725 | Msa1447470:three_prime_UTR | 30.0% |
| GCATAAAATAAGCAATGTCT+GGG | + | tig0031750:34787-34806 | Msa1447470:intergenic | 30.0% | |
| TGCATAAAATAAGCAATGTC+TGG | + | tig0031750:34788-34807 | Msa1447470:intergenic | 30.0% | |
| AAACAAAAGGTTTCTACCTT+GGG | + | tig0031750:34949-34968 | Msa1447470:intergenic | 30.0% | |
| AAAACAAAAGGTTTCTACCT+TGG | + | tig0031750:34950-34969 | Msa1447470:intergenic | 30.0% | |
| !! | TATACACAGATTGTTGACTT+GGG | + | tig0031750:35013-35032 | Msa1447470:intergenic | 30.0% |
| ! | TTATACACAGATTGTTGACT+TGG | + | tig0031750:35014-35033 | Msa1447470:intergenic | 30.0% |
| ATGATATCTTCTTCATCATC+AGG | + | tig0031750:35314-35333 | Msa1447470:intergenic | 30.0% | |
| ATAGAAACAGAGAATTTGTG+TGG | + | tig0031750:35510-35529 | Msa1447470:intergenic | 30.0% | |
| TATCAAGGGTTAATAAGCAA+TGG | - | tig0031750:35555-35574 | Msa1447470:intron | 30.0% | |
| ! | CTTGTCTTTTATGACATGTA+TGG | - | tig0031750:35732-35751 | Msa1447470:intron | 30.0% |
| AGGTAAGATAAGAAGGAAAA+GGG | + | tig0031750:36067-36086 | Msa1447470:intergenic | 30.0% | |
| AAGGTAAGATAAGAAGGAAA+AGG | + | tig0031750:36068-36087 | Msa1447470:intergenic | 30.0% | |
| CACCATCAAATTTGCATTAT+CGG | + | tig0031750:36677-36696 | Msa1447470:intergenic | 30.0% | |
| ATGGTGAACATAATTTCTCT+TGG | - | tig0031750:36691-36710 | Msa1447470:intron | 30.0% | |
| ATTATCTGTAGGGAAATCAA+TGG | - | tig0031750:36770-36789 | Msa1447470:CDS | 30.0% | |
| TTATCTGTAGGGAAATCAAT+GGG | - | tig0031750:36771-36790 | Msa1447470:CDS | 30.0% | |
| AATATATGTTTCAGGATTCC+TGG | + | tig0031750:36809-36828 | Msa1447470:intergenic | 30.0% | |
| TTGATGTTTGAGCTTAAACT+AGG | - | tig0031750:37171-37190 | Msa1447470:CDS | 30.0% | |
| ATTGTAGATAGATGAGTGAT+GGG | + | tig0031750:37377-37396 | Msa1447470:intergenic | 30.0% | |
| TATTGTAGATAGATGAGTGA+TGG | + | tig0031750:37378-37397 | Msa1447470:intergenic | 30.0% | |
| ! | TTGATTGGTTACAATTTCCA+TGG | - | tig0031750:37462-37481 | Msa1447470:intron | 30.0% |
| ACTGTTAATAGATGAGTGAT+GGG | + | tig0031750:37622-37641 | Msa1447470:intergenic | 30.0% | |
| TACTGTTAATAGATGAGTGA+TGG | + | tig0031750:37623-37642 | Msa1447470:intergenic | 30.0% | |
| TTGAATATTTCTCGAACTTC+TGG | + | tig0031750:37725-37744 | Msa1447470:intergenic | 30.0% | |
| GGAAAGAAATTATAAGCAGA+TGG | + | tig0031750:37837-37856 | Msa1447470:intergenic | 30.0% | |
| GAAAAGAAAAGGTAAATGGA+AGG | + | tig0031750:37858-37877 | Msa1447470:intergenic | 30.0% | |
| CTGAAAGTAGTGAAAAGAAA+AGG | + | tig0031750:37869-37888 | Msa1447470:intergenic | 30.0% | |
| ! | CTTTTCTTTTCACTACTTTC+AGG | - | tig0031750:37867-37886 | Msa1447470:intron | 30.0% |
| TCATTGTGATGAGTTACAAA+TGG | + | tig0031750:37940-37959 | Msa1447470:intergenic | 30.0% | |
| ATATGCGGCAAATTTCAATT+AGG | - | tig0031750:38253-38272 | Msa1447470:CDS | 30.0% | |
| TATAGCTTCCATTTGTAAGT+TGG | + | tig0031750:38288-38307 | Msa1447470:intergenic | 30.0% | |
| CAACTCCATTTGAATGATAT+TGG | + | tig0031750:38315-38334 | Msa1447470:intergenic | 30.0% | |
| AACTTGTCAGTCATCAATTA+TGG | - | tig0031750:38385-38404 | Msa1447470:intron | 30.0% | |
| TGTATTCTTCTTATCGTTAC+AGG | - | tig0031750:38444-38463 | Msa1447470:intron | 30.0% | |
| ! | TGTACAATCTGTTTCTTTGT+TGG | - | tig0031750:38627-38646 | Msa1447470:intron | 30.0% |
| CAATTTCAACAATGGAAAAG+GGG | + | tig0031750:38707-38726 | Msa1447470:intergenic | 30.0% | |
| CTCAATTTCAACAATGGAAA+AGG | + | tig0031750:38709-38728 | Msa1447470:intergenic | 30.0% | |
| TGACTAAAATATCAGTGGAA+CGG | + | tig0031750:38863-38882 | Msa1447470:intergenic | 30.0% | |
| GACAAACAATTCAAAACGTT+CGG | + | tig0031750:39043-39062 | Msa1447470:intergenic | 30.0% | |
| GAAGTAAGTTAATGAAACTC+TGG | - | tig0031750:39072-39091 | Msa1447470:intron | 30.0% | |
| GTAACAAGAAAAGTAACAAC+AGG | + | tig0031750:39152-39171 | Msa1447470:intergenic | 30.0% | |
| ATATCATAGAGTGGTTTGAT+TGG | + | tig0031750:39343-39362 | Msa1447470:intergenic | 30.0% | |
| AGCAAATTGATATCATAGAG+TGG | + | tig0031750:39352-39371 | Msa1447470:intergenic | 30.0% | |
| !!! | CTTACATTTTTGGTTCCTTT+TGG | - | tig0031750:39706-39725 | Msa1447470:exon | 30.0% |
| CAATAAAAACCTTTAGCTGA+AGG | + | tig0031750:39782-39801 | Msa1447470:intergenic | 30.0% | |
| TAGGGAAAAATATTAAGCCT+AGG | + | tig0031750:39888-39907 | Msa1447470:intergenic | 30.0% | |
| !!! | TTTTTCCCTACATTGATTTC+AGG | - | tig0031750:39898-39917 | Msa1447470:five_prime_UTR | 30.0% |
| AAGTTCCTGAAATCAATGTA+GGG | + | tig0031750:39906-39925 | Msa1447470:intergenic | 30.0% | |
| GTTATGTAATTACTCCAAGT+AGG | - | tig0031750:40085-40104 | Msa1447470:five_prime_UTR | 30.0% | |
| ATTCAACCGATTAAACCGAA+TGG | - | tig0031750:34681-34700 | Msa1447470:three_prime_UTR | 35.0% | |
| ACCAAACCATTCGGTTTAAT+CGG | + | tig0031750:34690-34709 | Msa1447470:intergenic | 35.0% | |
| TAAAACCAGACCAAACCATT+CGG | + | tig0031750:34699-34718 | Msa1447470:intergenic | 35.0% | |
| !! | TTAATCCTCATGAGTTGGTA+TGG | + | tig0031750:34815-34834 | Msa1447470:intergenic | 35.0% |
| AACAAAAGGTTTCTACCTTG+GGG | + | tig0031750:34948-34967 | Msa1447470:intergenic | 35.0% | |
| ACTCTACATAGATAGAGAGA+AGG | - | tig0031750:35038-35057 | Msa1447470:intron | 35.0% | |
| CTCTACATAGATAGAGAGAA+GGG | - | tig0031750:35039-35058 | Msa1447470:intron | 35.0% | |
| GGGAATTGAAGAAGATTTGA+AGG | - | tig0031750:35059-35078 | Msa1447470:intron | 35.0% | |
| ATTACCAACCAAATCAAAGG+AGG | + | tig0031750:35144-35163 | Msa1447470:intergenic | 35.0% | |
| !! | TCCTTTGATTTGGTTGGTAA+TGG | - | tig0031750:35143-35162 | Msa1447470:intron | 35.0% |
| TCCATTACCAACCAAATCAA+AGG | + | tig0031750:35147-35166 | Msa1447470:intergenic | 35.0% | |
| TAGCATTAAGGTTCATCACA+TGG | - | tig0031750:35240-35259 | Msa1447470:CDS | 35.0% | |
| ATATCTTCTTCATCATCAGG+TGG | + | tig0031750:35311-35330 | Msa1447470:intergenic | 35.0% | |
| TATACTTAAGCCTGTTCTCA+CGG | + | tig0031750:35452-35471 | Msa1447470:intergenic | 35.0% | |
| ACAGAGAATTTGTGTGGATA+GGG | + | tig0031750:35504-35523 | Msa1447470:intergenic | 35.0% | |
| AACAGAGAATTTGTGTGGAT+AGG | + | tig0031750:35505-35524 | Msa1447470:intergenic | 35.0% | |
| AAGACACAGAAACATCTTCA+AGG | + | tig0031750:35587-35606 | Msa1447470:intergenic | 35.0% | |
| ! | TGAAGATGTTTCTGTGTCTT+TGG | - | tig0031750:35587-35606 | Msa1447470:intron | 35.0% |
| ! | TATATTTTCCCTTTACTGGC+AGG | + | tig0031750:35824-35843 | Msa1447470:intergenic | 35.0% |
| ACATAGTAACATCTCAAACC+TGG | + | tig0031750:36348-36367 | Msa1447470:intergenic | 35.0% | |
| !! | ATTTCACTCCTCTAAAGTGA+AGG | - | tig0031750:36440-36459 | Msa1447470:intron | 35.0% |
| !! | TTTCACTCCTCTAAAGTGAA+GGG | - | tig0031750:36441-36460 | Msa1447470:intron | 35.0% |
| CATCAAATTTGCATTATCGG+CGG | + | tig0031750:36674-36693 | Msa1447470:intergenic | 35.0% | |
| !!! | ATCTTCCATTTTTGGTGGTT+TGG | - | tig0031750:36993-37012 | Msa1447470:intron | 35.0% |
| !!! | TCTTCCATTTTTGGTGGTTT+GGG | - | tig0031750:36994-37013 | Msa1447470:intron | 35.0% |
| ATGAGAGAAAATGCCTACTT+CGG | + | tig0031750:37049-37068 | Msa1447470:intergenic | 35.0% | |
| GATAATATCAAGCAAGTGCA+TGG | + | tig0031750:37197-37216 | Msa1447470:intergenic | 35.0% | |
| AAGATTAGTGTTCTGATCTG+AGG | - | tig0031750:37315-37334 | Msa1447470:intron | 35.0% | |
| !! | TATAAATTTGGTGGGTTCCA+TGG | + | tig0031750:37482-37501 | Msa1447470:intergenic | 35.0% |
| TGGAACCCACCAAATTTATA+TGG | - | tig0031750:37482-37501 | Msa1447470:intron | 35.0% | |
| GGAACCCACCAAATTTATAT+GGG | - | tig0031750:37483-37502 | Msa1447470:intron | 35.0% | |
| ATGTGGGTCCCATATAAATT+TGG | + | tig0031750:37494-37513 | Msa1447470:intergenic | 35.0% | |
| TAACACACACTCTCTTTGAT+TGG | + | tig0031750:37545-37564 | Msa1447470:intergenic | 35.0% | |
| GATGCAACATCAAATCCAAA+TGG | + | tig0031750:37592-37611 | Msa1447470:intergenic | 35.0% | |
| GATGCAACATCAAATCCAAA+TGG | + | tig0031750:37592-37611 | Msa1447470:intergenic | 35.0% | |
| AACAAACCTCCAAGAAATCA+CGG | + | tig0031750:37793-37812 | Msa1447470:intergenic | 35.0% | |
| ATAACAGAGGAAATGTTGAG+CGG | - | tig0031750:38150-38169 | Msa1447470:intron | 35.0% | |
| ATGTTGAGCGGTAAGAATTA+AGG | - | tig0031750:38162-38181 | Msa1447470:intron | 35.0% | |
| TCATTCAAATGGAGTTGACA+AGG | - | tig0031750:38318-38337 | Msa1447470:intron | 35.0% | |
| ATTCTTCTTATCGTTACAGG+AGG | - | tig0031750:38447-38466 | Msa1447470:intron | 35.0% | |
| ACTTAGTATTCCAAAGGACT+TGG | - | tig0031750:38505-38524 | Msa1447470:intron | 35.0% | |
| !! | ATATTGATTAGCTTCCTCAC+TGG | + | tig0031750:38531-38550 | Msa1447470:intergenic | 35.0% |
| TTGATCATATTGCAGCTTGT+AGG | - | tig0031750:38916-38935 | Msa1447470:intron | 35.0% | |
| !!! | ATTTTTGGTTCCTTTTGGGT+TGG | - | tig0031750:39711-39730 | Msa1447470:five_prime_UTR | 35.0% |
| CAAGTTCCTGAAATCAATGT+AGG | + | tig0031750:39907-39926 | Msa1447470:intergenic | 35.0% | |
| CTCCAAGTAGGATTAAGATT+AGG | - | tig0031750:40097-40116 | Msa1447470:five_prime_UTR | 35.0% | |
| CTCCTAATCTTAATCCTACT+TGG | + | tig0031750:40102-40121 | Msa1447470:intergenic | 35.0% | |
| ACCGATTAAACCGAATGGTT+TGG | - | tig0031750:34686-34705 | Msa1447470:three_prime_UTR | 40.0% | |
| !! | TTAAACCGAATGGTTTGGTC+TGG | - | tig0031750:34691-34710 | Msa1447470:three_prime_UTR | 40.0% |
| ATTGTCCATACCAACTCATG+AGG | - | tig0031750:34807-34826 | Msa1447470:three_prime_UTR | 40.0% | |
| !!! | TTGACTTGGGAACCAAGTTT+TGG | + | tig0031750:35000-35019 | Msa1447470:intergenic | 40.0% |
| GAGGACAAAGCAACTAAACA+GGG | + | tig0031750:35125-35144 | Msa1447470:intergenic | 40.0% | |
| TGCTTTGTCCTCCTTTGATT+TGG | - | tig0031750:35133-35152 | Msa1447470:intron | 40.0% | |
| !! | TTGTCCTCCTTTGATTTGGT+TGG | - | tig0031750:35137-35156 | Msa1447470:intron | 40.0% |
| AATGGAAGCTACTACTTCGT+CGG | - | tig0031750:35161-35180 | Msa1447470:intron | 40.0% | |
| CGAGTTACTTACAGTATTCG+CGG | + | tig0031750:35205-35224 | Msa1447470:intergenic | 40.0% | |
| AGAAGATATCATCGACCCAA+AGG | - | tig0031750:35322-35341 | Msa1447470:CDS | 40.0% | |
| ATATCATCGACCCAAAGGTA+TGG | - | tig0031750:35327-35346 | Msa1447470:CDS | 40.0% | |
| CTATGTATTAGGCCGAGTTA+AGG | - | tig0031750:35686-35705 | Msa1447470:intron | 40.0% | |
| CTATAGTGAGATAGAGCTTG+CGG | - | tig0031750:35963-35982 | Msa1447470:intron | 40.0% | |
| !! | AAGTTATATCTCTGGGATGC+AGG | - | tig0031750:36241-36260 | Msa1447470:intron | 40.0% |
| GTGAAGCGATTTGACATTGT+CGG | - | tig0031750:36309-36328 | Msa1447470:CDS | 40.0% | |
| !! | TTCACTCCTCTAAAGTGAAG+GGG | - | tig0031750:36442-36461 | Msa1447470:intron | 40.0% |
| !! | CATTTTGACAAGGGAACAAC+AGG | + | tig0031750:36547-36566 | Msa1447470:intergenic | 40.0% |
| TTCCCTTGTCAAAATGTCCA+GGG | - | tig0031750:36551-36570 | Msa1447470:CDS | 40.0% | |
| !! | TTCCCTGGACATTTTGACAA+GGG | + | tig0031750:36556-36575 | Msa1447470:intergenic | 40.0% |
| !! | TTTCCCTGGACATTTTGACA+AGG | + | tig0031750:36557-36576 | Msa1447470:intergenic | 40.0% |
| CAAAATGTCCAGGGAAAAGT+AGG | - | tig0031750:36560-36579 | Msa1447470:CDS | 40.0% | |
| CGCCGATAATGCAAATTTGA+TGG | - | tig0031750:36672-36691 | Msa1447470:intron | 40.0% | |
| !!! | CTTCCATTTTTGGTGGTTTG+GGG | - | tig0031750:36995-37014 | Msa1447470:intron | 40.0% |
| AGATTGAGATAGACCGAAGT+AGG | - | tig0031750:37033-37052 | Msa1447470:intron | 40.0% | |
| ! | CAAAGAGAGTGTGCTGAAAA+GGG | + | tig0031750:37445-37464 | Msa1447470:intergenic | 40.0% |
| ! | TCAAAGAGAGTGTGCTGAAA+AGG | + | tig0031750:37446-37465 | Msa1447470:intergenic | 40.0% |
| TTCAGCACACTCTCTTTGAT+TGG | - | tig0031750:37447-37466 | Msa1447470:intron | 40.0% | |
| GGGTCCCATATAAATTTGGT+GGG | + | tig0031750:37490-37509 | Msa1447470:intergenic | 40.0% | |
| TGGGTCCCATATAAATTTGG+TGG | + | tig0031750:37491-37510 | Msa1447470:intergenic | 40.0% | |
| TATATGGGACCCACATGATT+TGG | - | tig0031750:37498-37517 | Msa1447470:intron | 40.0% | |
| AGCATTTCGTTCATGCCATT+TGG | - | tig0031750:37574-37593 | Msa1447470:intron | 40.0% | |
| AAGATATCGTTCACGCCATT+TGG | - | tig0031750:37685-37704 | Msa1447470:intron | 40.0% | |
| CCTATGATGATCAAGATTGC+CGG | - | tig0031750:37898-37917 | Msa1447470:intron | 40.0% | |
| AGCTGCTTGAGATAAAGTTC+TGG | + | tig0031750:37994-38013 | Msa1447470:intergenic | 40.0% | |
| AGAACTTTATCTCAAGCAGC+TGG | - | tig0031750:37993-38012 | Msa1447470:intron | 40.0% | |
| TATCTCAAGCAGCTGGTTAT+TGG | - | tig0031750:38000-38019 | Msa1447470:intron | 40.0% | |
| CTGGGTCGTGTTTATGAAAT+CGG | - | tig0031750:38027-38046 | Msa1447470:intron | 40.0% | |
| ! | TGAGTTCTATATGCCGTTTG+CGG | - | tig0031750:38107-38126 | Msa1447470:intron | 40.0% |
| AGGTCATAGTAATCCGCAAA+CGG | + | tig0031750:38123-38142 | Msa1447470:intergenic | 40.0% | |
| TTTCCTCTGTTATCTCCATC+AGG | + | tig0031750:38143-38162 | Msa1447470:intergenic | 40.0% | |
| GGAGTGAAGTCTATTTCGAT+AGG | + | tig0031750:38346-38365 | Msa1447470:intergenic | 40.0% | |
| AAGTTTACACTGCACCTGAA+GGG | + | tig0031750:38370-38389 | Msa1447470:intergenic | 40.0% | |
| CAGGAGGATTGATATGATTG+AGG | - | tig0031750:38463-38482 | Msa1447470:intron | 40.0% | |
| GATTGAGGAACTAGAGAGTA+TGG | - | tig0031750:38478-38497 | Msa1447470:intron | 40.0% | |
| CACACGTTTCTTCCAAAAAG+TGG | + | tig0031750:38942-38961 | Msa1447470:intergenic | 40.0% | |
| GGGTGATTCATGATGAATGT+AGG | + | tig0031750:38970-38989 | Msa1447470:intergenic | 40.0% | |
| CCAAAGGACTCATTATTTCG+GGG | + | tig0031750:38990-39009 | Msa1447470:intergenic | 40.0% | |
| GCCAAAGGACTCATTATTTC+GGG | + | tig0031750:38991-39010 | Msa1447470:intergenic | 40.0% | |
| GGCCAAAGGACTCATTATTT+CGG | + | tig0031750:38992-39011 | Msa1447470:intergenic | 40.0% | |
| ACAATTCAAAACGTTCGGTC+AGG | + | tig0031750:39038-39057 | Msa1447470:intergenic | 40.0% | |
| ! | GAGATTTGCTCAACAACTCA+AGG | - | tig0031750:39226-39245 | Msa1447470:intron | 40.0% |
| AGTGCAAAATTCCTCGTCTA+AGG | + | tig0031750:39547-39566 | Msa1447470:intergenic | 40.0% | |
| !!! | TTTTGCACTGCTTTGGAGTA+TGG | - | tig0031750:39558-39577 | Msa1447470:intron | 40.0% |
| AGGTACATCTTGAGGTTTCA+TGG | + | tig0031750:39762-39781 | Msa1447470:intergenic | 40.0% | |
| ! | TTAGCTGAAGGTACATCTTG+AGG | + | tig0031750:39770-39789 | Msa1447470:intergenic | 40.0% |
| CAAGATGTACCTTCAGCTAA+AGG | - | tig0031750:39770-39789 | Msa1447470:five_prime_UTR | 40.0% | |
| ! | GTTTTCAGATGCTTTGTGCT+TGG | - | tig0031750:40135-40154 | Msa1447470:five_prime_UTR | 40.0% |
| !!! | GTTTTTTTTTGTGGCGGTCG+AGG | - | tig0031750:34755-34774 | Msa1447470:three_prime_UTR | 45.0% |
| !!! | TTGGGAACCAAGTTTTGGCT+GGG | + | tig0031750:34995-35014 | Msa1447470:intergenic | 45.0% |
| GGAGGACAAAGCAACTAAAC+AGG | + | tig0031750:35126-35145 | Msa1447470:intergenic | 45.0% | |
| CACTCTCTCTCGTAGCATTA+AGG | - | tig0031750:35228-35247 | Msa1447470:CDS | 45.0% | |
| ACATGTGCAGCCATACCTTT+GGG | + | tig0031750:35340-35359 | Msa1447470:intergenic | 45.0% | |
| ! | GATGTTTCTGTGTCTTTGGC+TGG | - | tig0031750:35591-35610 | Msa1447470:intron | 45.0% |
| ! | AAGTGCGTATGGCCTTAACT+CGG | + | tig0031750:35701-35720 | Msa1447470:intergenic | 45.0% |
| TGACTCCAAGGTCCAGATTA+TGG | - | tig0031750:35761-35780 | Msa1447470:intron | 45.0% | |
| ATCAGCCATAATCTGGACCT+TGG | + | tig0031750:35769-35788 | Msa1447470:intergenic | 45.0% | |
| TCCAGATTATGGCTGATGCA+AGG | - | tig0031750:35772-35791 | Msa1447470:intron | 45.0% | |
| ACCTTGCATCAGCCATAATC+TGG | + | tig0031750:35776-35795 | Msa1447470:intergenic | 45.0% | |
| TGACCTTACCTGCCAGTAAA+GGG | - | tig0031750:35813-35832 | Msa1447470:CDS | 45.0% | |
| TTTCCCTTTACTGGCAGGTA+AGG | + | tig0031750:35819-35838 | Msa1447470:intergenic | 45.0% | |
| GGAATAGGGTCTACAGAAGA+AGG | + | tig0031750:36176-36195 | Msa1447470:intergenic | 45.0% | |
| !! | TTTGACATTGTCGGTGTCAC+TGG | - | tig0031750:36318-36337 | Msa1447470:CDS | 45.0% |
| CAAGAAAGACAGCCCAAGAA+GGG | + | tig0031750:36419-36438 | Msa1447470:intergenic | 45.0% | |
| !! | TCACTCCTCTAAAGTGAAGG+GGG | - | tig0031750:36443-36462 | Msa1447470:intron | 45.0% |
| GTTCCCTTGTCAAAATGTCC+AGG | - | tig0031750:36550-36569 | Msa1447470:CDS | 45.0% | |
| TAGGGAAATCAATGGGTACC+AGG | - | tig0031750:36778-36797 | Msa1447470:CDS | 45.0% | |
| ! | TCTGATCTGAGGTGTGAAGT+TGG | - | tig0031750:37326-37345 | Msa1447470:intron | 45.0% |
| !! | TAGATGAGTGATGGGTGATC+TGG | + | tig0031750:37614-37633 | Msa1447470:intergenic | 45.0% |
| CCAAGAAATCACGGTCATCA+AGG | + | tig0031750:37784-37803 | Msa1447470:intergenic | 45.0% | |
| ! | CCTTGATGACCGTGATTTCT+TGG | - | tig0031750:37781-37800 | Msa1447470:intron | 45.0% |
| TGATGACCGTGATTTCTTGG+AGG | - | tig0031750:37784-37803 | Msa1447470:intron | 45.0% | |
| CCGGCAATCTTGATCATCAT+AGG | + | tig0031750:37901-37920 | Msa1447470:intergenic | 45.0% | |
| ATGATGATCAAGATTGCCGG+TGG | - | tig0031750:37901-37920 | Msa1447470:intron | 45.0% | |
| TCAAGCAGCTGGTTATTGGT+GGG | - | tig0031750:38004-38023 | Msa1447470:intron | 45.0% | |
| CGTAGTGAACTCAGGATTGT+GGG | + | tig0031750:38085-38104 | Msa1447470:intergenic | 45.0% | |
| ACGTAGTGAACTCAGGATTG+TGG | + | tig0031750:38086-38105 | Msa1447470:intergenic | 45.0% | |
| AACTCACACGTAGTGAACTC+AGG | + | tig0031750:38093-38112 | Msa1447470:intergenic | 45.0% | |
| ! | TGCGGATTACTATGACCTGA+TGG | - | tig0031750:38125-38144 | Msa1447470:intron | 45.0% |
| TGACCTGATGGAGATAACAG+AGG | - | tig0031750:38137-38156 | Msa1447470:intron | 45.0% | |
| CAAGTTTACACTGCACCTGA+AGG | + | tig0031750:38371-38390 | Msa1447470:intergenic | 45.0% | |
| GGCAGGACTTAGTATTCCAA+AGG | - | tig0031750:38499-38518 | Msa1447470:intron | 45.0% | |
| TTTATCCAACAACCGAGCAG+TGG | + | tig0031750:38603-38622 | Msa1447470:intergenic | 45.0% | |
| ! | AAGGGGTTACAACCTGCTTT+TGG | + | tig0031750:38690-38709 | Msa1447470:intergenic | 45.0% |
| CCCCGAAATAATGAGTCCTT+TGG | - | tig0031750:38987-39006 | Msa1447470:intron | 45.0% | |
| GTCTACGTTTCCTGCATATG+AGG | - | tig0031750:39491-39510 | Msa1447470:intron | 45.0% | |
| CGTTTCCTGCATATGAGGAT+CGG | - | tig0031750:39496-39515 | Msa1447470:intron | 45.0% | |
| TGCATATGAGGATCGGCAAT+CGG | - | tig0031750:39503-39522 | Msa1447470:intron | 45.0% | |
| ! | CGAGGAATTTTGCACTGCTT+TGG | - | tig0031750:39551-39570 | Msa1447470:CDS | 45.0% |
| !! | GTTGGGGTTTGGGTATTGAT+AGG | - | tig0031750:39598-39617 | Msa1447470:intron | 45.0% |
| !!! | GTTCCTTTTGGGTTGGTTAC+AGG | - | tig0031750:39718-39737 | Msa1447470:five_prime_UTR | 45.0% |
| CTTCCTGTAACCAACCCAAA+AGG | + | tig0031750:39724-39743 | Msa1447470:intergenic | 45.0% | |
| ! | GCACAAAGCATCTGAAAACG+AGG | + | tig0031750:40134-40153 | Msa1447470:intergenic | 45.0% |
| !! | AAAAAAATTAAAAAAAGAAA+TGG | + | tig0031750:36197-36216 | Msa1447470:intergenic | 5.0% |
| !!! | TTATTAAAATTTAAAATGAT+AGG | + | tig0031750:36477-36496 | Msa1447470:intergenic | 5.0% |
| !!! | TTATAAAATCTATTATATTT+TGG | - | tig0031750:38408-38427 | Msa1447470:intron | 5.0% |
| AACCTGCATCCGATCCAATC+TGG | + | tig0031750:34652-34671 | None:intergenic | 50.0% | |
| !!! | TGGGAACCAAGTTTTGGCTG+GGG | + | tig0031750:34994-35013 | Msa1447470:intergenic | 50.0% |
| !! | CTTGGGAACCAAGTTTTGGC+TGG | + | tig0031750:34996-35015 | Msa1447470:intergenic | 50.0% |
| CTTACAGTATTCGCGGTTGC+CGG | + | tig0031750:35198-35217 | Msa1447470:intergenic | 50.0% | |
| CACATGTGCAGCCATACCTT+TGG | + | tig0031750:35341-35360 | Msa1447470:intergenic | 50.0% | |
| TGTTCTCACGGTATTGCTGC+AGG | + | tig0031750:35440-35459 | Msa1447470:intergenic | 50.0% | |
| TGCAGCAATACCGTGAGAAC+AGG | - | tig0031750:35439-35458 | Msa1447470:intron | 50.0% | |
| !! | TTTGGCTGGTTCGTAGTCTC+CGG | - | tig0031750:35605-35624 | Msa1447470:intron | 50.0% |
| GTTAAGGCCATACGCACTTC+AGG | - | tig0031750:35702-35721 | Msa1447470:intron | 50.0% | |
| CTTTGCACCTGAAGTGCGTA+TGG | + | tig0031750:35712-35731 | Msa1447470:intergenic | 50.0% | |
| GTATGGCGATGATGACTCCA+AGG | - | tig0031750:35749-35768 | Msa1447470:intron | 50.0% | |
| CTGACCTTACCTGCCAGTAA+AGG | - | tig0031750:35812-35831 | Msa1447470:CDS | 50.0% | |
| !! | CAGGAGTTCTGACTTGGATG+TGG | - | tig0031750:36260-36279 | Msa1447470:CDS | 50.0% |
| CCAAGAAAGACAGCCCAAGA+AGG | + | tig0031750:36420-36439 | Msa1447470:intergenic | 50.0% | |
| CCTTCTTGGGCTGTCTTTCT+TGG | - | tig0031750:36417-36436 | Msa1447470:intron | 50.0% | |
| TGTCCAGGGAAAAGTAGGAC+AGG | - | tig0031750:36565-36584 | Msa1447470:CDS | 50.0% | |
| !! | TCTCCTGTCCTACTTTTCCC+TGG | + | tig0031750:36571-36590 | Msa1447470:intergenic | 50.0% |
| ! | GCAGCAGCAGACTCTTGTTT+GGG | + | tig0031750:36649-36668 | Msa1447470:intergenic | 50.0% |
| AGCAGCAGCAGACTCTTGTT+TGG | + | tig0031750:36650-36669 | Msa1447470:intergenic | 50.0% | |
| !! | AATGGGTACCAGGAAGTACC+AGG | - | tig0031750:36788-36807 | Msa1447470:CDS | 50.0% |
| TCAGGATTCCTGGTACTTCC+TGG | + | tig0031750:36799-36818 | Msa1447470:intergenic | 50.0% | |
| ACGCCCCAAACCACCAAAAA+TGG | + | tig0031750:37001-37020 | Msa1447470:intergenic | 50.0% | |
| ! | ATGGGACCCACATGATTTGG+TGG | - | tig0031750:37501-37520 | Msa1447470:intron | 50.0% |
| !! | TGGGACCCACATGATTTGGT+GGG | - | tig0031750:37502-37521 | Msa1447470:intron | 50.0% |
| TGGGTCCCACCAAATCATGT+GGG | + | tig0031750:37510-37529 | Msa1447470:intergenic | 50.0% | |
| ATGGGTCCCACCAAATCATG+TGG | + | tig0031750:37511-37530 | Msa1447470:intergenic | 50.0% | |
| GCAGATGGCGTCAGAATACT+TGG | + | tig0031750:37822-37841 | Msa1447470:intergenic | 50.0% | |
| CTCAAGCAGCTGGTTATTGG+TGG | - | tig0031750:38003-38022 | Msa1447470:intron | 50.0% | |
| TAGACTTCACTCCACCCTTC+AGG | - | tig0031750:38353-38372 | Msa1447470:intron | 50.0% | |
| TTTACACTGCACCTGAAGGG+TGG | + | tig0031750:38367-38386 | Msa1447470:intergenic | 50.0% | |
| ! | GAGGAACTAGAGAGTATGGC+AGG | - | tig0031750:38482-38501 | Msa1447470:intron | 50.0% |
| ACAACCGAGCAGTGGTTTGA+GGG | + | tig0031750:38595-38614 | Msa1447470:intergenic | 50.0% | |
| AACAACCGAGCAGTGGTTTG+AGG | + | tig0031750:38596-38615 | Msa1447470:intergenic | 50.0% | |
| TCAAACCACTGCTCGGTTGT+TGG | - | tig0031750:38595-38614 | Msa1447470:intron | 50.0% | |
| !!! | GCAGCTTGTAGGCCACTTTT+TGG | - | tig0031750:38927-38946 | Msa1447470:intron | 50.0% |
| !! | TGGTTTTGCTCTGTGCGACT+TGG | + | tig0031750:39013-39032 | Msa1447470:intergenic | 50.0% |
| AAGTCGCACAGAGCAAAACC+AGG | - | tig0031750:39012-39031 | Msa1447470:intron | 50.0% | |
| AATCTCTGACGCTGCACAAC+AGG | + | tig0031750:39212-39231 | Msa1447470:intergenic | 50.0% | |
| GATTGCCGATCCTCATATGC+AGG | + | tig0031750:39504-39523 | Msa1447470:intergenic | 50.0% | |
| GCATATGAGGATCGGCAATC+GGG | - | tig0031750:39504-39523 | Msa1447470:intron | 50.0% | |
| CATATGAGGATCGGCAATCG+GGG | - | tig0031750:39505-39524 | Msa1447470:intron | 50.0% | |
| ATATGAGGATCGGCAATCGG+GGG | - | tig0031750:39506-39525 | Msa1447470:intron | 50.0% | |
| GAGTATGGTATGCCACCAAC+TGG | - | tig0031750:39573-39592 | Msa1447470:intron | 50.0% | |
| TATGGTATGCCACCAACTGG+CGG | - | tig0031750:39576-39595 | Msa1447470:intron | 50.0% | |
| GGGTCTACGCTTTGACGAAG+GGG | + | tig0031750:34928-34947 | Msa1447470:intergenic | 55.0% | |
| GGGGTCTACGCTTTGACGAA+GGG | + | tig0031750:34929-34948 | Msa1447470:intergenic | 55.0% | |
| TGGGGTCTACGCTTTGACGA+AGG | + | tig0031750:34930-34949 | Msa1447470:intergenic | 55.0% | |
| TCGTCAAAGCGTAGACCCCA+AGG | - | tig0031750:34930-34949 | Msa1447470:exon | 55.0% | |
| !!! | CCAAGTTTTGGCTGGGGAGT+GGG | + | tig0031750:34988-35007 | Msa1447470:intergenic | 55.0% |
| !!! | ACCAAGTTTTGGCTGGGGAG+TGG | + | tig0031750:34989-35008 | Msa1447470:intergenic | 55.0% |
| TTCGTCGGAGCCTATACCTC+CGG | - | tig0031750:35176-35195 | Msa1447470:intron | 55.0% | |
| ! | GGGATGCAGGAGTTCTGACT+TGG | - | tig0031750:36254-36273 | Msa1447470:CDS | 55.0% |
| !! | GTCGGTGTCACTGGATTTCC+AGG | - | tig0031750:36327-36346 | Msa1447470:CDS | 55.0% |
| GGACACCCCCTTCACTTTAG+AGG | + | tig0031750:36451-36470 | Msa1447470:intergenic | 55.0% | |
| !! | CAGCTGGTTATTGGTGGGCT+GGG | - | tig0031750:38009-38028 | Msa1447470:intron | 55.0% |
| TCCAAAGGACTTGGCCAGTG+AGG | - | tig0031750:38514-38533 | Msa1447470:intron | 55.0% | |
| TCCTCACTGGCCAAGTCCTT+TGG | + | tig0031750:38518-38537 | Msa1447470:intergenic | 55.0% | |
| AACCGAGCAGTGGTTTGAGG+GGG | + | tig0031750:38593-38612 | Msa1447470:intergenic | 55.0% | |
| CAACCGAGCAGTGGTTTGAG+GGG | + | tig0031750:38594-38613 | Msa1447470:intergenic | 55.0% | |
| TCAAAACGTTCGGTCAGGCC+TGG | + | tig0031750:39033-39052 | Msa1447470:intergenic | 55.0% | |
| ATCGGGGGATGATGAAGCGA+TGG | - | tig0031750:39521-39540 | Msa1447470:intron | 55.0% | |
| ! | TGAAGCGATGGCCTTAGACG+AGG | - | tig0031750:39533-39552 | Msa1447470:CDS | 55.0% |
| TATGCCACCAACTGGCGGTT+GGG | - | tig0031750:39581-39600 | Msa1447470:intron | 55.0% | |
| CCCACTCCCCAGCCAAAACT+TGG | - | tig0031750:34985-35004 | Msa1447470:intron | 60.0% | |
| ! | TTCGCGGTTGCCGGAGGTAT+AGG | + | tig0031750:35189-35208 | Msa1447470:intergenic | 60.0% |
| ACAGTATTCGCGGTTGCCGG+AGG | + | tig0031750:35195-35214 | Msa1447470:intergenic | 60.0% | |
| ! | GCAGCTGGTTATTGGTGGGC+TGG | - | tig0031750:38008-38027 | Msa1447470:intron | 60.0% |
| CTCCCCCTCAAACCACTGCT+CGG | - | tig0031750:38588-38607 | Msa1447470:CDS | 60.0% | |
| ! | GCTCTGTGCGACTTGGCCAA+AGG | + | tig0031750:39006-39025 | Msa1447470:intergenic | 60.0% |
| GTATGCCACCAACTGGCGGT+TGG | - | tig0031750:39580-39599 | Msa1447470:intron | 60.0% | |
| ATGCCACCAACTGGCGGTTG+GGG | - | tig0031750:39582-39601 | Msa1447470:intron | 60.0% | |
| AAACCCCAACCGCCAGTTGG+TGG | + | tig0031750:39588-39607 | Msa1447470:intergenic | 60.0% | |
| ACCAACTGGCGGTTGGGGTT+TGG | - | tig0031750:39587-39606 | Msa1447470:intron | 60.0% | |
| CCAACTGGCGGTTGGGGTTT+GGG | - | tig0031750:39588-39607 | Msa1447470:intron | 60.0% | |
| TGGACGAGCTGCTGCTCCAC+CGG | + | tig0031750:37920-37939 | Msa1447470:intergenic | 65.0% | |
| CCCAAACCCCAACCGCCAGT+TGG | + | tig0031750:39591-39610 | Msa1447470:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031750 | gene | 34648 | 40222 | 34648 | ID=Msa1447470;Name=Msa1447470 |
| tig0031750 | mRNA | 34648 | 40222 | 34648 | ID=Msa1447470-mRNA-1;Parent=Msa1447470;Name=Msa1447470-mRNA-1;_AED=0.10;_eAED=0.10;_QI=514|1|1|1|1|1|16|295|571 |
| tig0031750 | exon | 34648 | 34950 | 34648 | ID=Msa1447470-mRNA-1:exon:15919;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 35079 | 35130 | 35079 | ID=Msa1447470-mRNA-1:exon:15918;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 35214 | 35357 | 35214 | ID=Msa1447470-mRNA-1:exon:15917;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 35623 | 35691 | 35623 | ID=Msa1447470-mRNA-1:exon:15916;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 35796 | 35939 | 35796 | ID=Msa1447470-mRNA-1:exon:15915;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 36248 | 36404 | 36248 | ID=Msa1447470-mRNA-1:exon:15914;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 36496 | 36595 | 36496 | ID=Msa1447470-mRNA-1:exon:15913;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 36699 | 36981 | 36699 | ID=Msa1447470-mRNA-1:exon:15912;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 37065 | 37190 | 37065 | ID=Msa1447470-mRNA-1:exon:15911;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 38030 | 38089 | 38030 | ID=Msa1447470-mRNA-1:exon:15910;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 38177 | 38298 | 38177 | ID=Msa1447470-mRNA-1:exon:15909;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 38522 | 38607 | 38522 | ID=Msa1447470-mRNA-1:exon:15908;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 39077 | 39173 | 39077 | ID=Msa1447470-mRNA-1:exon:15907;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 39258 | 39426 | 39258 | ID=Msa1447470-mRNA-1:exon:15906;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 39527 | 39574 | 39527 | ID=Msa1447470-mRNA-1:exon:15905;Parent=Msa1447470-mRNA-1 |
| tig0031750 | exon | 39658 | 40222 | 39658 | ID=Msa1447470-mRNA-1:exon:15904;Parent=Msa1447470-mRNA-1 |
| tig0031750 | five_prime_UTR | 39709 | 40222 | 39709 | ID=Msa1447470-mRNA-1:five_prime_utr;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 39658 | 39708 | 39658 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 39527 | 39574 | 39527 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 39258 | 39426 | 39258 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 39077 | 39173 | 39077 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 38522 | 38607 | 38522 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 38177 | 38298 | 38177 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 38030 | 38089 | 38030 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 37065 | 37190 | 37065 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 36699 | 36981 | 36699 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 36496 | 36595 | 36496 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 36248 | 36404 | 36248 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 35796 | 35939 | 35796 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 35623 | 35691 | 35623 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 35214 | 35357 | 35214 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 35079 | 35130 | 35079 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | CDS | 34943 | 34950 | 34943 | ID=Msa1447470-mRNA-1:cds;Parent=Msa1447470-mRNA-1 |
| tig0031750 | three_prime_UTR | 34648 | 34942 | 34648 | ID=Msa1447470-mRNA-1:three_prime_utr;Parent=Msa1447470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
