AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0788450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788450 MtrunA17_Chr5g0447531 99.623 265 1 0 1 265 1 265 0.0 540
Msa0788450 MtrunA17_Chr4g0051941 82.500 240 38 1 30 265 27 266 5.13e-149 417
Msa0788450 MtrunA17_Chr6g0453151 82.083 240 40 2 29 265 93 332 4.47e-148 417
Msa0788450 MtrunA17_Chr6g0453141 82.500 240 39 2 29 265 26 265 3.29e-147 412
Msa0788450 MtrunA17_Chr6g0453181 75.281 267 58 3 2 265 4 265 4.46e-145 407
Msa0788450 MtrunA17_Chr6g0453161 75.373 268 60 3 1 265 268 532 2.09e-143 412
Msa0788450 MtrunA17_Chr6g0453161 83.404 235 36 2 34 265 33 267 1.39e-142 410
Msa0788450 MtrunA17_Chr2g0318521 70.076 264 66 6 5 265 11 264 2.55e-124 354
Msa0788450 MtrunA17_Chr6g0464511 67.234 235 41 2 31 265 14 212 2.28e-107 309
Msa0788450 MtrunA17_Chr6g0476641 54.067 209 87 4 49 253 71 274 2.79e-62 197
Msa0788450 MtrunA17_Chr1g0157481 45.817 251 118 7 17 253 76 322 5.21e-62 198
Msa0788450 MtrunA17_Chr6g0453171 82.653 98 17 0 168 265 1 98 1.17e-54 171
Msa0788450 MtrunA17_Chr5g0448421 42.857 217 89 10 62 253 63 269 4.04e-37 132
Msa0788450 MtrunA17_Chr5g0448411 41.935 217 91 9 62 253 61 267 1.81e-36 130
Msa0788450 MtrunA17_Chr3g0133901 41.146 192 99 4 66 249 68 253 5.19e-36 129
Msa0788450 MtrunA17_Chr8g0345631 37.069 232 107 9 34 249 48 256 6.64e-36 129
Msa0788450 MtrunA17_Chr6g0462031 39.655 232 102 9 27 253 35 233 1.66e-35 127
Msa0788450 MtrunA17_Chr2g0301081 36.444 225 109 9 52 260 60 266 1.01e-31 117
Msa0788450 MtrunA17_Chr3g0092091 34.826 201 97 6 66 252 63 243 8.30e-28 107
Msa0788450 MtrunA17_Chr4g0006181 42.593 162 72 7 93 250 192 336 3.09e-25 102
Msa0788450 MtrunA17_Chr3g0113311 44.371 151 63 8 93 239 137 270 6.97e-21 89.4
Msa0788450 MtrunA17_Chr2g0279001 32.850 207 89 7 66 242 73 259 1.22e-17 80.1
Msa0788450 MtrunA17_Chr2g0296081 48.438 64 29 1 189 252 36 95 1.89e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788450 AT2G05100.1 86.792 265 35 0 1 265 1 265 2.85e-176 486
Msa0788450 AT2G05070.1 86.038 265 37 0 1 265 1 265 2.42e-175 484
Msa0788450 AT3G27690.2 85.714 266 37 1 1 265 33 298 1.27e-173 481
Msa0788450 AT3G27690.1 85.714 266 37 1 1 265 1 266 2.35e-173 479
Msa0788450 AT2G05100.2 86.920 237 31 0 1 237 1 237 7.44e-153 429
Msa0788450 AT2G34420.1 75.746 268 55 3 2 265 4 265 5.21e-144 404
Msa0788450 AT1G29920.1 76.119 268 56 3 2 265 4 267 6.17e-144 404
Msa0788450 AT1G29910.1 76.119 268 56 3 2 265 4 267 6.17e-144 404
Msa0788450 AT1G29930.1 75.836 269 55 4 2 265 4 267 1.01e-143 404
Msa0788450 AT2G34430.1 76.119 268 55 5 2 265 4 266 7.57e-143 402
Msa0788450 AT5G54270.1 67.293 266 75 6 2 264 8 264 3.05e-121 347
Msa0788450 AT1G76570.1 44.776 268 129 7 2 256 62 323 2.77e-62 199
Msa0788450 AT4G10340.1 52.632 209 90 5 49 253 62 265 1.82e-57 185
Msa0788450 AT1G45474.2 41.969 193 97 4 66 249 56 242 5.46e-38 134
Msa0788450 AT1G45474.1 41.969 193 97 4 66 249 56 242 5.46e-38 134
Msa0788450 AT1G61520.3 40.486 247 107 12 32 253 34 265 6.94e-38 134
Msa0788450 AT1G61520.1 40.486 247 107 12 32 253 34 265 6.94e-38 134
Msa0788450 AT3G54890.1 43.367 196 91 6 63 253 52 232 1.03e-36 130
Msa0788450 AT3G61470.1 39.024 205 109 6 52 249 50 245 4.00e-36 129
Msa0788450 AT1G61520.2 42.308 208 85 10 72 254 14 211 1.86e-33 121
Msa0788450 AT1G19150.1 34.222 225 114 7 52 260 63 269 1.57e-29 112
Msa0788450 AT3G47470.1 38.342 193 101 6 66 252 64 244 2.32e-28 108
Msa0788450 AT3G08940.2 34.201 269 107 12 33 250 27 276 3.26e-26 104
Msa0788450 AT3G54890.4 41.875 160 74 5 63 218 52 196 3.89e-25 99.8
Msa0788450 AT5G01530.1 41.212 165 76 7 93 253 135 282 4.90e-25 101
Msa0788450 AT2G40100.1 43.137 153 67 7 93 242 136 271 7.24e-23 95.1
Msa0788450 AT3G54890.2 35.233 193 77 5 63 253 52 198 2.06e-22 92.4
Msa0788450 AT1G15820.1 30.916 262 123 9 15 242 19 256 5.45e-18 81.3
Msa0788450 AT5G28450.1 52.941 68 30 2 184 249 94 161 4.97e-14 68.9
Msa0788450 AT3G54890.3 43.182 88 42 2 63 149 52 132 2.21e-11 61.2

Find 136 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTTCCTTGCAAAGGTTTC+AGG 0.102826 5_2:-75125547 None:intergenic
AGAGGGTGGCCTTGACTATT+TGG 0.205421 5_2:+75125702 Msa0788450:CDS
CATGAGTTCAGAATATTTAT+TGG 0.223691 5_2:+75126249 Msa0788450:three_prime_UTR
TAAAATCATCAACTACTTAA+AGG 0.232276 5_2:+75126378 Msa0788450:three_prime_UTR
CGGTGAGGCTGTGTGGTTTA+AGG 0.263630 5_2:+75125660 Msa0788450:CDS
TTTGTTCAAGCCATTGTTAC+TGG 0.264682 5_2:+75125967 Msa0788450:CDS
GCACAAGAGTTGACATTTCT+TGG 0.265825 5_2:-75126227 None:intergenic
CTCAGAGCATTCTTGCAATC+TGG 0.295339 5_2:+75125746 Msa0788450:CDS
ATGAGGGCGTTGAGGTTTCT+TGG 0.298444 5_2:-75124943 None:intergenic
CTCTGAGCATGGATCAGGTT+TGG 0.324151 5_2:-75125730 None:intergenic
GTCTTGGCGTTCTCATTGTC+CGG 0.330962 5_2:-75126073 None:intergenic
GAGGGTGGCCTTGACTATTT+GGG 0.336583 5_2:+75125703 Msa0788450:CDS
GGTCTTAAAACTTTGTTGTC+TGG 0.337060 5_2:-75126344 None:intergenic
TTGGCTATGTTCTCCATGTT+TGG 0.341425 5_2:+75125940 Msa0788450:CDS
TTCAACTCTGCGAATGCATC+AGG 0.344835 5_2:-75125892 None:intergenic
GTAGTTACATTGGTGAAAAT+AGG 0.354237 5_2:-75126154 None:intergenic
CCCTGACCGTCCCAAGTACT+TGG 0.361481 5_2:+75125438 Msa0788450:CDS
TTGTTTCAAACCAGTCTTGC+CGG 0.363409 5_2:-75124998 None:intergenic
ATGAGTTCAGAATATTTATT+GGG 0.365072 5_2:+75126250 Msa0788450:three_prime_UTR
GGTGAGTTTCCTGGTGACTA+TGG 0.365981 5_2:+75125496 Msa0788450:CDS
CCGTTCTTCTCAAGGATCTC+AGG 0.374661 5_2:-75125628 None:intergenic
TAACATAAAATAAGAGGTAT+AGG 0.381999 5_2:-75126310 None:intergenic
TACTTGACTGGTGAGTTTCC+TGG 0.393901 5_2:+75125487 Msa0788450:CDS
GCCCATGCGTTGTTGGCGAC+AGG 0.394359 5_2:-75126030 None:intergenic
GGCTACACAGGTTGTGCTCA+TGG 0.400913 5_2:+75125768 Msa0788450:CDS
CACAAGAGTTGACATTTCTT+GGG 0.402979 5_2:-75126226 None:intergenic
CCCAAGTACTTGGGACGGTC+AGG 0.404268 5_2:-75125439 None:intergenic
TCTGAGCATGGATCAGGTTT+GGG 0.410646 5_2:-75125729 None:intergenic
GAGAAGAACGGTGTTAAATT+CGG 0.410939 5_2:+75125640 Msa0788450:CDS
TCTTGGCGTTCTCATTGTCC+GGG 0.416065 5_2:-75126072 None:intergenic
TGGTCGTAAAGGTTCTGAAC+AGG 0.417502 5_2:-75125997 None:intergenic
TGCCGGTGAATGCTGATTGT+TGG 0.417954 5_2:-75124981 None:intergenic
TGGGCTATGCTTGGTGCATT+GGG 0.418579 5_2:+75125595 Msa0788450:CDS
GGTGGTGCCTTTGACCCTCT+TGG 0.419230 5_2:+75125856 Msa0788450:CDS
AGCATATGCCCATGCGTTGT+TGG 0.419884 5_2:-75126037 None:intergenic
GTGCTCATGGGATTTGTTGA+AGG 0.427865 5_2:+75125781 Msa0788450:CDS
ATGGGCTATGCTTGGTGCAT+TGG 0.428620 5_2:+75125594 Msa0788450:CDS
ACTAATTAACATAAAATAAG+AGG 0.435132 5_2:-75126316 None:intergenic
AACAAGGAAATGAGTTCATC+AGG 0.436049 5_2:+75125016 Msa0788450:CDS
AGAGTGCTCCTGAGAGCATT+TGG 0.436155 5_2:+75125088 Msa0788450:CDS
ATCAGGAAAGCTGGTAACTT+TGG 0.441484 5_2:+75125033 Msa0788450:CDS
TGATGCATTCGCAGAGTTGA+AGG 0.448661 5_2:+75125894 Msa0788450:CDS
AGAGAATGGACCCAAGTACT+TGG 0.454278 5_2:-75125449 None:intergenic
GAATGCTCTGAGCATGGATC+AGG 0.464537 5_2:-75125735 None:intergenic
AAAATAAGAGGTATAGGTTA+CGG 0.467392 5_2:-75126304 None:intergenic
TTCTGCTTGTGTAGTTACAT+TGG 0.473050 5_2:-75126164 None:intergenic
TCAGAGCATTCTTGCAATCT+GGG 0.473136 5_2:+75125747 Msa0788450:CDS
ACCCTGTCGCCAACAACGCA+TGG 0.473833 5_2:+75126028 Msa0788450:CDS
TCAGCATTCACCGGCAAGAC+TGG 0.481069 5_2:+75124988 Msa0788450:CDS
TTGAAGTAATTCACAGCAGA+TGG 0.482906 5_2:+75125575 Msa0788450:CDS
AAGGCACCACCAGGGTATAG+TGG 0.492859 5_2:-75125844 None:intergenic
GTTGAAGGCTACAGAGTTGG+TGG 0.494755 5_2:+75125796 Msa0788450:CDS
CACAGCAGATGGGCTATGCT+TGG 0.495212 5_2:+75125586 Msa0788450:CDS
AACTCACCAGTCAAGTATGA+TGG 0.498383 5_2:-75125481 None:intergenic
AGTTTCCTGGTGACTATGGA+TGG 0.502040 5_2:+75125500 Msa0788450:CDS
CTCAAGAGGCCACCATGTCT+TGG 0.502591 5_2:-75126089 None:intergenic
GATGGAATTTGCTCAGAGAA+TGG 0.503528 5_2:-75125463 None:intergenic
CAAGCCATTGTTACTGGCAA+GGG 0.504441 5_2:+75125973 Msa0788450:CDS
AAGCTCACGGTTCCTTGCAA+AGG 0.505875 5_2:-75125554 None:intergenic
AATGAGTTCATCAGGAAAGC+TGG 0.507285 5_2:+75125024 Msa0788450:CDS
ATTTAACACCGTTCTTCTCA+AGG 0.517683 5_2:-75125636 None:intergenic
GAATGAGTTTGCACACAAAA+CGG 0.519083 5_2:+75126428 Msa0788450:three_prime_UTR
GCTACACAGGTTGTGCTCAT+GGG 0.523866 5_2:+75125769 Msa0788450:CDS
AGCAGAAGATTCAGCTCAAG+AGG 0.525912 5_2:-75126103 None:intergenic
GACTATGGATGGGACACAGC+TGG 0.528763 5_2:+75125511 Msa0788450:CDS
GGTCAGCAACATGGTCGTAA+AGG 0.529520 5_2:-75126008 None:intergenic
CCCATGCGTTGTTGGCGACA+GGG 0.536409 5_2:-75126029 None:intergenic
ACTACTTACCAAATGCTCTC+AGG 0.536679 5_2:-75125096 None:intergenic
CCCTGTCGCCAACAACGCAT+GGG 0.536908 5_2:+75126029 Msa0788450:CDS
AGCAAGACCAAGAGGGTCAA+AGG 0.536924 5_2:-75125863 None:intergenic
TGCACACAAAACGGTAAGAA+TGG 0.538835 5_2:+75126437 Msa0788450:three_prime_UTR
TCAAGCCATTGTTACTGGCA+AGG 0.539300 5_2:+75125972 Msa0788450:CDS
CAAATTCCATCATACTTGAC+TGG 0.540774 5_2:+75125475 Msa0788450:CDS
CGTTCTTCTCAAGGATCTCA+GGG 0.541586 5_2:-75125627 None:intergenic
AGAGGGTCAAAGGCACCACC+AGG 0.542069 5_2:-75125853 None:intergenic
GAATGGTGTTCAGATCAATC+AGG 0.543550 5_2:+75126454 Msa0788450:three_prime_UTR
GCCCAGATCTTCTCAGAGGG+TGG 0.543898 5_2:+75125688 Msa0788450:CDS
TTTGTTGAAGGCTACAGAGT+TGG 0.545933 5_2:+75125793 Msa0788450:CDS
TCTTGCAATCTGGGCTACAC+AGG 0.546344 5_2:+75125756 Msa0788450:CDS
CCTGACCGTCCCAAGTACTT+GGG 0.552290 5_2:+75125439 Msa0788450:CDS
AGAGTTGGTGGAGGACCACT+TGG 0.559575 5_2:+75125808 Msa0788450:CDS
GATTGCAGAGGTGGCCATGA+GGG 0.561616 5_2:-75124959 None:intergenic
GGAACTCAAGAACGGCCGAT+TGG 0.563130 5_2:+75125921 Msa0788450:CDS
GAGGCTGTGTGGTTTAAGGC+TGG 0.563162 5_2:+75125664 Msa0788450:CDS
GGTGCCCAGATCTTCTCAGA+GGG 0.564509 5_2:+75125685 Msa0788450:CDS
AGGTGGCCATGAGGGCGTTG+AGG 0.567837 5_2:-75124951 None:intergenic
ACATATAATCAGCCACAGAC+AGG 0.568395 5_2:-75126190 None:intergenic
TTGCAAGAATGCTCTGAGCA+TGG 0.570179 5_2:-75125741 None:intergenic
GCCACCCTCTGAGAAGATCT+GGG 0.573456 5_2:-75125689 None:intergenic
ATCCAACAATCAGCATTCAC+CGG 0.576154 5_2:+75124979 Msa0788450:CDS
ACATGGAGAACATAGCCAAT+CGG 0.576833 5_2:-75125936 None:intergenic
GGCAAGACTGGTTTGAAACA+AGG 0.588152 5_2:+75125000 Msa0788450:CDS
GTGGTAGGTAACAATGCACC+TGG 0.589809 5_2:+75126476 Msa0788450:three_prime_UTR
AGGCACCACCAGGGTATAGT+GGG 0.590141 5_2:-75125843 None:intergenic
CCTGAGATCCTTGAGAAGAA+CGG 0.593147 5_2:+75125628 Msa0788450:CDS
TGATTGTTGGATTGCAGAGG+TGG 0.593510 5_2:-75124968 None:intergenic
TGGCGACAGGGTCAGCAACA+TGG 0.597357 5_2:-75126017 None:intergenic
AGGGCCCTTGCCAGTAACAA+TGG 0.597695 5_2:-75125977 None:intergenic
CCAAGTACTTGGGACGGTCA+GGG 0.599166 5_2:-75125438 None:intergenic
GAGAATGGACCCAAGTACTT+GGG 0.599574 5_2:-75125448 None:intergenic
GTTCAGATCAATCAGGTGGT+AGG 0.604514 5_2:+75126461 Msa0788450:three_prime_UTR
TTGGGTTGCCCAAATAGTCA+AGG 0.608462 5_2:-75125711 None:intergenic
TGAAGTAATTCACAGCAGAT+GGG 0.611387 5_2:+75125576 Msa0788450:CDS
GTGTCCCATCCATAGTCACC+AGG 0.613151 5_2:-75125505 None:intergenic
CTGATTATATGTTAGAAATG+TGG 0.614343 5_2:+75126201 Msa0788450:three_prime_UTR
CTGATCCTGAAACCTTTGCA+AGG 0.615014 5_2:+75125542 Msa0788450:CDS
TGGTGCCCAGATCTTCTCAG+AGG 0.616548 5_2:+75125684 Msa0788450:CDS
TATGCTACTAACTTCGTCCC+CGG 0.620877 5_2:+75126054 Msa0788450:CDS
GGTGGAGGACCACTTGGTGA+AGG 0.624859 5_2:+75125814 Msa0788450:CDS
ACAATGAGAACGCCAAGACA+TGG 0.625601 5_2:+75126077 Msa0788450:exon
GGGTCTAGTCCTTCACCAAG+TGG 0.625944 5_2:-75125823 None:intergenic
TCAACTCTGCGAATGCATCA+GGG 0.627212 5_2:-75125891 None:intergenic
GGGTCATCAGCAAGACCAAG+AGG 0.629020 5_2:-75125871 None:intergenic
GGTCGTAAAGGTTCTGAACA+GGG 0.631913 5_2:-75125996 None:intergenic
ACTCTTCACAGTACGACGCA+TGG 0.636134 5_2:-75125070 None:intergenic
CTTCTCAAGGATCTCAGGGA+AGG 0.637864 5_2:-75125623 None:intergenic
TGCTGATTGTTGGATTGCAG+AGG 0.642666 5_2:-75124971 None:intergenic
ATTCGCAGAGTTGAAGGTCA+AGG 0.644022 5_2:+75125900 Msa0788450:CDS
AAGGTCAAGGAACTCAAGAA+CGG 0.645041 5_2:+75125913 Msa0788450:CDS
TGTGAATTACTTCAAGCTCA+CGG 0.646318 5_2:-75125567 None:intergenic
GAAGGCTACAGAGTTGGTGG+AGG 0.651701 5_2:+75125799 Msa0788450:CDS
CTTGGCGTTCTCATTGTCCG+GGG 0.655135 5_2:-75126071 None:intergenic
TTAAATTCGGTGAGGCTGTG+TGG 0.662485 5_2:+75125653 Msa0788450:CDS
ATGGACCCAAGTACTTGGGA+CGG 0.662771 5_2:-75125444 None:intergenic
AAGAAACCTCAACGCCCTCA+TGG 0.666321 5_2:+75124945 Msa0788450:exon
GGATTGCAGAGGTGGCCATG+AGG 0.667634 5_2:-75124960 None:intergenic
GGACTAGACCCACTATACCC+TGG 0.675418 5_2:+75125835 Msa0788450:CDS
GGTCATCAGCAAGACCAAGA+GGG 0.676366 5_2:-75125870 None:intergenic
TGGTGTTCAGATCAATCAGG+TGG 0.687250 5_2:+75126457 Msa0788450:three_prime_UTR
CAAGCAGAAGAACCTGTCTG+TGG 0.691612 5_2:+75126178 Msa0788450:three_prime_UTR
GTTTCCTGGTGACTATGGAT+GGG 0.694385 5_2:+75125501 Msa0788450:CDS
ATGAGAACGCCAAGACATGG+TGG 0.713145 5_2:+75126080 Msa0788450:exon
GAACGGTGTTAAATTCGGTG+AGG 0.717704 5_2:+75125645 Msa0788450:CDS
GAGGGTCAAAGGCACCACCA+GGG 0.717882 5_2:-75125852 None:intergenic
TTGAACAAAGAAACCAAACA+TGG 0.730913 5_2:-75125953 None:intergenic
CTAGACCCACTATACCCTGG+TGG 0.775578 5_2:+75125838 Msa0788450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAATTAACATAAAATAAG+AGG - chr5_2:75126319-75126338 None:intergenic 15.0%
!! ACTAATTAACATAAAATAAG+AGG - chr5_2:75126319-75126338 None:intergenic 15.0%
!! ATCAAATGTTAATAACTAAC+TGG + chr5_2:75125272-75125291 Msa0788450:intron 20.0%
!!! TTGTTTTCATATATTTGACT+TGG + chr5_2:75125387-75125406 Msa0788450:intron 20.0%
!! ATGAGTTCAGAATATTTATT+GGG + chr5_2:75126250-75126269 Msa0788450:three_prime_UTR 20.0%
!!! TAACATAAAATAAGAGGTAT+AGG - chr5_2:75126313-75126332 None:intergenic 20.0%
!!! GTAGTTGATGATTTTATTTT+TGG - chr5_2:75126374-75126393 None:intergenic 20.0%
!! TAAAATCATCAACTACTTAA+AGG + chr5_2:75126378-75126397 Msa0788450:three_prime_UTR 20.0%
!! ATCAAATGTTAATAACTAAC+TGG + chr5_2:75125272-75125291 Msa0788450:intron 20.0%
!!! TTGTTTTCATATATTTGACT+TGG + chr5_2:75125387-75125406 Msa0788450:intron 20.0%
!! ATGAGTTCAGAATATTTATT+GGG + chr5_2:75126250-75126269 Msa0788450:three_prime_UTR 20.0%
!!! TAACATAAAATAAGAGGTAT+AGG - chr5_2:75126313-75126332 None:intergenic 20.0%
!!! GTAGTTGATGATTTTATTTT+TGG - chr5_2:75126374-75126393 None:intergenic 20.0%
!! TAAAATCATCAACTACTTAA+AGG + chr5_2:75126378-75126397 Msa0788450:three_prime_UTR 20.0%
!! ATGTGCTAATATTTGAAGTA+AGG + chr5_2:75125354-75125373 Msa0788450:intron 25.0%
! CTGATTATATGTTAGAAATG+TGG + chr5_2:75126201-75126220 Msa0788450:three_prime_UTR 25.0%
! CATGAGTTCAGAATATTTAT+TGG + chr5_2:75126249-75126268 Msa0788450:three_prime_UTR 25.0%
!! AAAATAAGAGGTATAGGTTA+CGG - chr5_2:75126307-75126326 None:intergenic 25.0%
!!! GATGATTTTATTTTTGGCTT+AGG - chr5_2:75126368-75126387 None:intergenic 25.0%
!! ATGTGCTAATATTTGAAGTA+AGG + chr5_2:75125354-75125373 Msa0788450:intron 25.0%
! CTGATTATATGTTAGAAATG+TGG + chr5_2:75126201-75126220 Msa0788450:three_prime_UTR 25.0%
! CATGAGTTCAGAATATTTAT+TGG + chr5_2:75126249-75126268 Msa0788450:three_prime_UTR 25.0%
!! AAAATAAGAGGTATAGGTTA+CGG - chr5_2:75126307-75126326 None:intergenic 25.0%
!!! GATGATTTTATTTTTGGCTT+AGG - chr5_2:75126368-75126387 None:intergenic 25.0%
!!! TATGATCTGTTTTGAAAACC+AGG + chr5_2:75125410-75125429 Msa0788450:intron 30.0%
TTGAACAAAGAAACCAAACA+TGG - chr5_2:75125956-75125975 None:intergenic 30.0%
GTAGTTACATTGGTGAAAAT+AGG - chr5_2:75126157-75126176 None:intergenic 30.0%
!!! ACTTCTCATTTTTTACATCC+AGG - chr5_2:75126497-75126516 None:intergenic 30.0%
!!! TATGATCTGTTTTGAAAACC+AGG + chr5_2:75125410-75125429 Msa0788450:intron 30.0%
TTGAACAAAGAAACCAAACA+TGG - chr5_2:75125956-75125975 None:intergenic 30.0%
GTAGTTACATTGGTGAAAAT+AGG - chr5_2:75126157-75126176 None:intergenic 30.0%
!!! ACTTCTCATTTTTTACATCC+AGG - chr5_2:75126497-75126516 None:intergenic 30.0%
AACAAGGAAATGAGTTCATC+AGG + chr5_2:75125016-75125035 Msa0788450:CDS 35.0%
CAAGAGTCATGATGAGATAA+AGG - chr5_2:75125175-75125194 None:intergenic 35.0%
!!! CCTGCGTAATTTTAGCTTTT+GGG - chr5_2:75125234-75125253 None:intergenic 35.0%
!!! ACCTGCGTAATTTTAGCTTT+TGG - chr5_2:75125235-75125254 None:intergenic 35.0%
!!! TCTGTTTTGAAAACCAGGTA+TGG + chr5_2:75125415-75125434 Msa0788450:intron 35.0%
CAAATTCCATCATACTTGAC+TGG + chr5_2:75125475-75125494 Msa0788450:CDS 35.0%
TGTGAATTACTTCAAGCTCA+CGG - chr5_2:75125570-75125589 None:intergenic 35.0%
TTGAAGTAATTCACAGCAGA+TGG + chr5_2:75125575-75125594 Msa0788450:CDS 35.0%
TGAAGTAATTCACAGCAGAT+GGG + chr5_2:75125576-75125595 Msa0788450:CDS 35.0%
ATTTAACACCGTTCTTCTCA+AGG - chr5_2:75125639-75125658 None:intergenic 35.0%
! GAGAAGAACGGTGTTAAATT+CGG + chr5_2:75125640-75125659 Msa0788450:CDS 35.0%
TTTGTTCAAGCCATTGTTAC+TGG + chr5_2:75125967-75125986 Msa0788450:CDS 35.0%
TTCTGCTTGTGTAGTTACAT+TGG - chr5_2:75126167-75126186 None:intergenic 35.0%
CACAAGAGTTGACATTTCTT+GGG - chr5_2:75126229-75126248 None:intergenic 35.0%
! GGTCTTAAAACTTTGTTGTC+TGG - chr5_2:75126347-75126366 None:intergenic 35.0%
GAATGAGTTTGCACACAAAA+CGG + chr5_2:75126428-75126447 Msa0788450:three_prime_UTR 35.0%
AACAAGGAAATGAGTTCATC+AGG + chr5_2:75125016-75125035 Msa0788450:CDS 35.0%
CAAGAGTCATGATGAGATAA+AGG - chr5_2:75125175-75125194 None:intergenic 35.0%
!!! CCTGCGTAATTTTAGCTTTT+GGG - chr5_2:75125234-75125253 None:intergenic 35.0%
!!! ACCTGCGTAATTTTAGCTTT+TGG - chr5_2:75125235-75125254 None:intergenic 35.0%
!!! TCTGTTTTGAAAACCAGGTA+TGG + chr5_2:75125415-75125434 Msa0788450:intron 35.0%
CAAATTCCATCATACTTGAC+TGG + chr5_2:75125475-75125494 Msa0788450:CDS 35.0%
TGTGAATTACTTCAAGCTCA+CGG - chr5_2:75125570-75125589 None:intergenic 35.0%
TTGAAGTAATTCACAGCAGA+TGG + chr5_2:75125575-75125594 Msa0788450:CDS 35.0%
TGAAGTAATTCACAGCAGAT+GGG + chr5_2:75125576-75125595 Msa0788450:CDS 35.0%
ATTTAACACCGTTCTTCTCA+AGG - chr5_2:75125639-75125658 None:intergenic 35.0%
! GAGAAGAACGGTGTTAAATT+CGG + chr5_2:75125640-75125659 Msa0788450:CDS 35.0%
TTTGTTCAAGCCATTGTTAC+TGG + chr5_2:75125967-75125986 Msa0788450:CDS 35.0%
TTCTGCTTGTGTAGTTACAT+TGG - chr5_2:75126167-75126186 None:intergenic 35.0%
CACAAGAGTTGACATTTCTT+GGG - chr5_2:75126229-75126248 None:intergenic 35.0%
! GGTCTTAAAACTTTGTTGTC+TGG - chr5_2:75126347-75126366 None:intergenic 35.0%
GAATGAGTTTGCACACAAAA+CGG + chr5_2:75126428-75126447 Msa0788450:three_prime_UTR 35.0%
ATCCAACAATCAGCATTCAC+CGG + chr5_2:75124979-75124998 Msa0788450:CDS 40.0%
TTGTTTCAAACCAGTCTTGC+CGG - chr5_2:75125001-75125020 None:intergenic 40.0%
AATGAGTTCATCAGGAAAGC+TGG + chr5_2:75125024-75125043 Msa0788450:CDS 40.0%
ATCAGGAAAGCTGGTAACTT+TGG + chr5_2:75125033-75125052 Msa0788450:CDS 40.0%
ACTACTTACCAAATGCTCTC+AGG - chr5_2:75125099-75125118 None:intergenic 40.0%
CCCAAAAGCTAAAATTACGC+AGG + chr5_2:75125231-75125250 Msa0788450:intron 40.0%
! GATGGAATTTGCTCAGAGAA+TGG - chr5_2:75125466-75125485 None:intergenic 40.0%
AACTCACCAGTCAAGTATGA+TGG - chr5_2:75125484-75125503 None:intergenic 40.0%
! TCAGAGCATTCTTGCAATCT+GGG + chr5_2:75125747-75125766 Msa0788450:CDS 40.0%
TTTGTTGAAGGCTACAGAGT+TGG + chr5_2:75125793-75125812 Msa0788450:CDS 40.0%
AAGGTCAAGGAACTCAAGAA+CGG + chr5_2:75125913-75125932 Msa0788450:CDS 40.0%
ACATGGAGAACATAGCCAAT+CGG - chr5_2:75125939-75125958 None:intergenic 40.0%
TTGGCTATGTTCTCCATGTT+TGG + chr5_2:75125940-75125959 Msa0788450:CDS 40.0%
ACATATAATCAGCCACAGAC+AGG - chr5_2:75126193-75126212 None:intergenic 40.0%
GCACAAGAGTTGACATTTCT+TGG - chr5_2:75126230-75126249 None:intergenic 40.0%
TGCACACAAAACGGTAAGAA+TGG + chr5_2:75126437-75126456 Msa0788450:three_prime_UTR 40.0%
GAATGGTGTTCAGATCAATC+AGG + chr5_2:75126454-75126473 Msa0788450:three_prime_UTR 40.0%
ATCCAACAATCAGCATTCAC+CGG + chr5_2:75124979-75124998 Msa0788450:CDS 40.0%
TTGTTTCAAACCAGTCTTGC+CGG - chr5_2:75125001-75125020 None:intergenic 40.0%
AATGAGTTCATCAGGAAAGC+TGG + chr5_2:75125024-75125043 Msa0788450:CDS 40.0%
ATCAGGAAAGCTGGTAACTT+TGG + chr5_2:75125033-75125052 Msa0788450:CDS 40.0%
ACTACTTACCAAATGCTCTC+AGG - chr5_2:75125099-75125118 None:intergenic 40.0%
CCCAAAAGCTAAAATTACGC+AGG + chr5_2:75125231-75125250 Msa0788450:intron 40.0%
! GATGGAATTTGCTCAGAGAA+TGG - chr5_2:75125466-75125485 None:intergenic 40.0%
AACTCACCAGTCAAGTATGA+TGG - chr5_2:75125484-75125503 None:intergenic 40.0%
! TCAGAGCATTCTTGCAATCT+GGG + chr5_2:75125747-75125766 Msa0788450:CDS 40.0%
TTTGTTGAAGGCTACAGAGT+TGG + chr5_2:75125793-75125812 Msa0788450:CDS 40.0%
AAGGTCAAGGAACTCAAGAA+CGG + chr5_2:75125913-75125932 Msa0788450:CDS 40.0%
ACATGGAGAACATAGCCAAT+CGG - chr5_2:75125939-75125958 None:intergenic 40.0%
TTGGCTATGTTCTCCATGTT+TGG + chr5_2:75125940-75125959 Msa0788450:CDS 40.0%
ACATATAATCAGCCACAGAC+AGG - chr5_2:75126193-75126212 None:intergenic 40.0%
GCACAAGAGTTGACATTTCT+TGG - chr5_2:75126230-75126249 None:intergenic 40.0%
TGCACACAAAACGGTAAGAA+TGG + chr5_2:75126437-75126456 Msa0788450:three_prime_UTR 40.0%
GAATGGTGTTCAGATCAATC+AGG + chr5_2:75126454-75126473 Msa0788450:three_prime_UTR 40.0%
TGATTGTTGGATTGCAGAGG+TGG - chr5_2:75124971-75124990 None:intergenic 45.0%
! TGCTGATTGTTGGATTGCAG+AGG - chr5_2:75124974-75124993 None:intergenic 45.0%
!! GGCAAGACTGGTTTGAAACA+AGG + chr5_2:75125000-75125019 Msa0788450:CDS 45.0%
GAGAATGGACCCAAGTACTT+GGG - chr5_2:75125451-75125470 None:intergenic 45.0%
AGAGAATGGACCCAAGTACT+TGG - chr5_2:75125452-75125471 None:intergenic 45.0%
TACTTGACTGGTGAGTTTCC+TGG + chr5_2:75125487-75125506 Msa0788450:CDS 45.0%
AGTTTCCTGGTGACTATGGA+TGG + chr5_2:75125500-75125519 Msa0788450:CDS 45.0%
GTTTCCTGGTGACTATGGAT+GGG + chr5_2:75125501-75125520 Msa0788450:CDS 45.0%
CTGATCCTGAAACCTTTGCA+AGG + chr5_2:75125542-75125561 Msa0788450:CDS 45.0%
CGTTCTTCTCAAGGATCTCA+GGG - chr5_2:75125630-75125649 None:intergenic 45.0%
CCTGAGATCCTTGAGAAGAA+CGG + chr5_2:75125628-75125647 Msa0788450:CDS 45.0%
! GAACGGTGTTAAATTCGGTG+AGG + chr5_2:75125645-75125664 Msa0788450:CDS 45.0%
! TTAAATTCGGTGAGGCTGTG+TGG + chr5_2:75125653-75125672 Msa0788450:CDS 45.0%
! TTGGGTTGCCCAAATAGTCA+AGG - chr5_2:75125714-75125733 None:intergenic 45.0%
TCTGAGCATGGATCAGGTTT+GGG - chr5_2:75125732-75125751 None:intergenic 45.0%
! TTGCAAGAATGCTCTGAGCA+TGG - chr5_2:75125744-75125763 None:intergenic 45.0%
! CTCAGAGCATTCTTGCAATC+TGG + chr5_2:75125746-75125765 Msa0788450:CDS 45.0%
!! GTGCTCATGGGATTTGTTGA+AGG + chr5_2:75125781-75125800 Msa0788450:CDS 45.0%
TCAACTCTGCGAATGCATCA+GGG - chr5_2:75125894-75125913 None:intergenic 45.0%
TTCAACTCTGCGAATGCATC+AGG - chr5_2:75125895-75125914 None:intergenic 45.0%
TGATGCATTCGCAGAGTTGA+AGG + chr5_2:75125894-75125913 Msa0788450:CDS 45.0%
ATTCGCAGAGTTGAAGGTCA+AGG + chr5_2:75125900-75125919 Msa0788450:CDS 45.0%
TCAAGCCATTGTTACTGGCA+AGG + chr5_2:75125972-75125991 Msa0788450:CDS 45.0%
CAAGCCATTGTTACTGGCAA+GGG + chr5_2:75125973-75125992 Msa0788450:CDS 45.0%
!! GGTCGTAAAGGTTCTGAACA+GGG - chr5_2:75125999-75126018 None:intergenic 45.0%
!! TGGTCGTAAAGGTTCTGAAC+AGG - chr5_2:75126000-75126019 None:intergenic 45.0%
TATGCTACTAACTTCGTCCC+CGG + chr5_2:75126054-75126073 Msa0788450:CDS 45.0%
ACAATGAGAACGCCAAGACA+TGG + chr5_2:75126077-75126096 Msa0788450:exon 45.0%
AGCAGAAGATTCAGCTCAAG+AGG - chr5_2:75126106-75126125 None:intergenic 45.0%
TGGTGTTCAGATCAATCAGG+TGG + chr5_2:75126457-75126476 Msa0788450:three_prime_UTR 45.0%
GTTCAGATCAATCAGGTGGT+AGG + chr5_2:75126461-75126480 Msa0788450:three_prime_UTR 45.0%
TGATTGTTGGATTGCAGAGG+TGG - chr5_2:75124971-75124990 None:intergenic 45.0%
! TGCTGATTGTTGGATTGCAG+AGG - chr5_2:75124974-75124993 None:intergenic 45.0%
!! GGCAAGACTGGTTTGAAACA+AGG + chr5_2:75125000-75125019 Msa0788450:CDS 45.0%
GAGAATGGACCCAAGTACTT+GGG - chr5_2:75125451-75125470 None:intergenic 45.0%
AGAGAATGGACCCAAGTACT+TGG - chr5_2:75125452-75125471 None:intergenic 45.0%
TACTTGACTGGTGAGTTTCC+TGG + chr5_2:75125487-75125506 Msa0788450:CDS 45.0%
AGTTTCCTGGTGACTATGGA+TGG + chr5_2:75125500-75125519 Msa0788450:CDS 45.0%
GTTTCCTGGTGACTATGGAT+GGG + chr5_2:75125501-75125520 Msa0788450:CDS 45.0%
CTGATCCTGAAACCTTTGCA+AGG + chr5_2:75125542-75125561 Msa0788450:CDS 45.0%
CGTTCTTCTCAAGGATCTCA+GGG - chr5_2:75125630-75125649 None:intergenic 45.0%
CCTGAGATCCTTGAGAAGAA+CGG + chr5_2:75125628-75125647 Msa0788450:CDS 45.0%
! GAACGGTGTTAAATTCGGTG+AGG + chr5_2:75125645-75125664 Msa0788450:CDS 45.0%
! TTAAATTCGGTGAGGCTGTG+TGG + chr5_2:75125653-75125672 Msa0788450:CDS 45.0%
! TTGGGTTGCCCAAATAGTCA+AGG - chr5_2:75125714-75125733 None:intergenic 45.0%
TCTGAGCATGGATCAGGTTT+GGG - chr5_2:75125732-75125751 None:intergenic 45.0%
! TTGCAAGAATGCTCTGAGCA+TGG - chr5_2:75125744-75125763 None:intergenic 45.0%
! CTCAGAGCATTCTTGCAATC+TGG + chr5_2:75125746-75125765 Msa0788450:CDS 45.0%
!! GTGCTCATGGGATTTGTTGA+AGG + chr5_2:75125781-75125800 Msa0788450:CDS 45.0%
TCAACTCTGCGAATGCATCA+GGG - chr5_2:75125894-75125913 None:intergenic 45.0%
TTCAACTCTGCGAATGCATC+AGG - chr5_2:75125895-75125914 None:intergenic 45.0%
TGATGCATTCGCAGAGTTGA+AGG + chr5_2:75125894-75125913 Msa0788450:CDS 45.0%
ATTCGCAGAGTTGAAGGTCA+AGG + chr5_2:75125900-75125919 Msa0788450:CDS 45.0%
TCAAGCCATTGTTACTGGCA+AGG + chr5_2:75125972-75125991 Msa0788450:CDS 45.0%
CAAGCCATTGTTACTGGCAA+GGG + chr5_2:75125973-75125992 Msa0788450:CDS 45.0%
!! GGTCGTAAAGGTTCTGAACA+GGG - chr5_2:75125999-75126018 None:intergenic 45.0%
!! TGGTCGTAAAGGTTCTGAAC+AGG - chr5_2:75126000-75126019 None:intergenic 45.0%
TATGCTACTAACTTCGTCCC+CGG + chr5_2:75126054-75126073 Msa0788450:CDS 45.0%
ACAATGAGAACGCCAAGACA+TGG + chr5_2:75126077-75126096 Msa0788450:exon 45.0%
AGCAGAAGATTCAGCTCAAG+AGG - chr5_2:75126106-75126125 None:intergenic 45.0%
TGGTGTTCAGATCAATCAGG+TGG + chr5_2:75126457-75126476 Msa0788450:three_prime_UTR 45.0%
GTTCAGATCAATCAGGTGGT+AGG + chr5_2:75126461-75126480 Msa0788450:three_prime_UTR 45.0%
!! ATGAGGGCGTTGAGGTTTCT+TGG - chr5_2:75124946-75124965 None:intergenic 50.0%
AAGAAACCTCAACGCCCTCA+TGG + chr5_2:75124945-75124964 Msa0788450:exon 50.0%
! TGCCGGTGAATGCTGATTGT+TGG - chr5_2:75124984-75125003 None:intergenic 50.0%
ACTCTTCACAGTACGACGCA+TGG - chr5_2:75125073-75125092 None:intergenic 50.0%
!! AGAGTGCTCCTGAGAGCATT+TGG + chr5_2:75125088-75125107 Msa0788450:CDS 50.0%
ATGGACCCAAGTACTTGGGA+CGG - chr5_2:75125447-75125466 None:intergenic 50.0%
GGTGAGTTTCCTGGTGACTA+TGG + chr5_2:75125496-75125515 Msa0788450:CDS 50.0%
CGGTTCCTTGCAAAGGTTTC+AGG - chr5_2:75125550-75125569 None:intergenic 50.0%
AAGCTCACGGTTCCTTGCAA+AGG - chr5_2:75125557-75125576 None:intergenic 50.0%
!! ATGGGCTATGCTTGGTGCAT+TGG + chr5_2:75125594-75125613 Msa0788450:CDS 50.0%
!! TGGGCTATGCTTGGTGCATT+GGG + chr5_2:75125595-75125614 Msa0788450:CDS 50.0%
CTTCTCAAGGATCTCAGGGA+AGG - chr5_2:75125626-75125645 None:intergenic 50.0%
CCGTTCTTCTCAAGGATCTC+AGG - chr5_2:75125631-75125650 None:intergenic 50.0%
! AGAGGGTGGCCTTGACTATT+TGG + chr5_2:75125702-75125721 Msa0788450:CDS 50.0%
! GAGGGTGGCCTTGACTATTT+GGG + chr5_2:75125703-75125722 Msa0788450:CDS 50.0%
CTCTGAGCATGGATCAGGTT+TGG - chr5_2:75125733-75125752 None:intergenic 50.0%
! GAATGCTCTGAGCATGGATC+AGG - chr5_2:75125738-75125757 None:intergenic 50.0%
TCTTGCAATCTGGGCTACAC+AGG + chr5_2:75125756-75125775 Msa0788450:CDS 50.0%
GCTACACAGGTTGTGCTCAT+GGG + chr5_2:75125769-75125788 Msa0788450:CDS 50.0%
GTTGAAGGCTACAGAGTTGG+TGG + chr5_2:75125796-75125815 Msa0788450:CDS 50.0%
AGCAAGACCAAGAGGGTCAA+AGG - chr5_2:75125866-75125885 None:intergenic 50.0%
GGTCATCAGCAAGACCAAGA+GGG - chr5_2:75125873-75125892 None:intergenic 50.0%
GGTCAGCAACATGGTCGTAA+AGG - chr5_2:75126011-75126030 None:intergenic 50.0%
AGCATATGCCCATGCGTTGT+TGG - chr5_2:75126040-75126059 None:intergenic 50.0%
TCTTGGCGTTCTCATTGTCC+GGG - chr5_2:75126075-75126094 None:intergenic 50.0%
GTCTTGGCGTTCTCATTGTC+CGG - chr5_2:75126076-75126095 None:intergenic 50.0%
ATGAGAACGCCAAGACATGG+TGG + chr5_2:75126080-75126099 Msa0788450:exon 50.0%
CAAGCAGAAGAACCTGTCTG+TGG + chr5_2:75126178-75126197 Msa0788450:three_prime_UTR 50.0%
GTGGTAGGTAACAATGCACC+TGG + chr5_2:75126476-75126495 Msa0788450:three_prime_UTR 50.0%
!! ATGAGGGCGTTGAGGTTTCT+TGG - chr5_2:75124946-75124965 None:intergenic 50.0%
AAGAAACCTCAACGCCCTCA+TGG + chr5_2:75124945-75124964 Msa0788450:exon 50.0%
! TGCCGGTGAATGCTGATTGT+TGG - chr5_2:75124984-75125003 None:intergenic 50.0%
ACTCTTCACAGTACGACGCA+TGG - chr5_2:75125073-75125092 None:intergenic 50.0%
!! AGAGTGCTCCTGAGAGCATT+TGG + chr5_2:75125088-75125107 Msa0788450:CDS 50.0%
ATGGACCCAAGTACTTGGGA+CGG - chr5_2:75125447-75125466 None:intergenic 50.0%
GGTGAGTTTCCTGGTGACTA+TGG + chr5_2:75125496-75125515 Msa0788450:CDS 50.0%
CGGTTCCTTGCAAAGGTTTC+AGG - chr5_2:75125550-75125569 None:intergenic 50.0%
AAGCTCACGGTTCCTTGCAA+AGG - chr5_2:75125557-75125576 None:intergenic 50.0%
!! ATGGGCTATGCTTGGTGCAT+TGG + chr5_2:75125594-75125613 Msa0788450:CDS 50.0%
!! TGGGCTATGCTTGGTGCATT+GGG + chr5_2:75125595-75125614 Msa0788450:CDS 50.0%
CTTCTCAAGGATCTCAGGGA+AGG - chr5_2:75125626-75125645 None:intergenic 50.0%
CCGTTCTTCTCAAGGATCTC+AGG - chr5_2:75125631-75125650 None:intergenic 50.0%
! AGAGGGTGGCCTTGACTATT+TGG + chr5_2:75125702-75125721 Msa0788450:CDS 50.0%
! GAGGGTGGCCTTGACTATTT+GGG + chr5_2:75125703-75125722 Msa0788450:CDS 50.0%
CTCTGAGCATGGATCAGGTT+TGG - chr5_2:75125733-75125752 None:intergenic 50.0%
! GAATGCTCTGAGCATGGATC+AGG - chr5_2:75125738-75125757 None:intergenic 50.0%
TCTTGCAATCTGGGCTACAC+AGG + chr5_2:75125756-75125775 Msa0788450:CDS 50.0%
GCTACACAGGTTGTGCTCAT+GGG + chr5_2:75125769-75125788 Msa0788450:CDS 50.0%
GTTGAAGGCTACAGAGTTGG+TGG + chr5_2:75125796-75125815 Msa0788450:CDS 50.0%
AGCAAGACCAAGAGGGTCAA+AGG - chr5_2:75125866-75125885 None:intergenic 50.0%
GGTCATCAGCAAGACCAAGA+GGG - chr5_2:75125873-75125892 None:intergenic 50.0%
GGTCAGCAACATGGTCGTAA+AGG - chr5_2:75126011-75126030 None:intergenic 50.0%
AGCATATGCCCATGCGTTGT+TGG - chr5_2:75126040-75126059 None:intergenic 50.0%
TCTTGGCGTTCTCATTGTCC+GGG - chr5_2:75126075-75126094 None:intergenic 50.0%
GTCTTGGCGTTCTCATTGTC+CGG - chr5_2:75126076-75126095 None:intergenic 50.0%
ATGAGAACGCCAAGACATGG+TGG + chr5_2:75126080-75126099 Msa0788450:exon 50.0%
CAAGCAGAAGAACCTGTCTG+TGG + chr5_2:75126178-75126197 Msa0788450:three_prime_UTR 50.0%
GTGGTAGGTAACAATGCACC+TGG + chr5_2:75126476-75126495 Msa0788450:three_prime_UTR 50.0%
GATTGCAGAGGTGGCCATGA+GGG - chr5_2:75124962-75124981 None:intergenic 55.0%
TCAGCATTCACCGGCAAGAC+TGG + chr5_2:75124988-75125007 Msa0788450:CDS 55.0%
CCAAGTACTTGGGACGGTCA+GGG - chr5_2:75125441-75125460 None:intergenic 55.0%
CCTGACCGTCCCAAGTACTT+GGG + chr5_2:75125439-75125458 Msa0788450:CDS 55.0%
GTGTCCCATCCATAGTCACC+AGG - chr5_2:75125508-75125527 None:intergenic 55.0%
GACTATGGATGGGACACAGC+TGG + chr5_2:75125511-75125530 Msa0788450:CDS 55.0%
!! CACAGCAGATGGGCTATGCT+TGG + chr5_2:75125586-75125605 Msa0788450:CDS 55.0%
CGGTGAGGCTGTGTGGTTTA+AGG + chr5_2:75125660-75125679 Msa0788450:CDS 55.0%
! GAGGCTGTGTGGTTTAAGGC+TGG + chr5_2:75125664-75125683 Msa0788450:CDS 55.0%
TGGTGCCCAGATCTTCTCAG+AGG + chr5_2:75125684-75125703 Msa0788450:CDS 55.0%
GGTGCCCAGATCTTCTCAGA+GGG + chr5_2:75125685-75125704 Msa0788450:CDS 55.0%
! GCCACCCTCTGAGAAGATCT+GGG - chr5_2:75125692-75125711 None:intergenic 55.0%
GGCTACACAGGTTGTGCTCA+TGG + chr5_2:75125768-75125787 Msa0788450:CDS 55.0%
!! GAAGGCTACAGAGTTGGTGG+AGG + chr5_2:75125799-75125818 Msa0788450:CDS 55.0%
!! AGAGTTGGTGGAGGACCACT+TGG + chr5_2:75125808-75125827 Msa0788450:CDS 55.0%
GGGTCTAGTCCTTCACCAAG+TGG - chr5_2:75125826-75125845 None:intergenic 55.0%
GGACTAGACCCACTATACCC+TGG + chr5_2:75125835-75125854 Msa0788450:CDS 55.0%
CTAGACCCACTATACCCTGG+TGG + chr5_2:75125838-75125857 Msa0788450:CDS 55.0%
AGGCACCACCAGGGTATAGT+GGG - chr5_2:75125846-75125865 None:intergenic 55.0%
! AAGGCACCACCAGGGTATAG+TGG - chr5_2:75125847-75125866 None:intergenic 55.0%
GGGTCATCAGCAAGACCAAG+AGG - chr5_2:75125874-75125893 None:intergenic 55.0%
GGAACTCAAGAACGGCCGAT+TGG + chr5_2:75125921-75125940 Msa0788450:CDS 55.0%
AGGGCCCTTGCCAGTAACAA+TGG - chr5_2:75125980-75125999 None:intergenic 55.0%
CTTGGCGTTCTCATTGTCCG+GGG - chr5_2:75126074-75126093 None:intergenic 55.0%
CTCAAGAGGCCACCATGTCT+TGG - chr5_2:75126092-75126111 None:intergenic 55.0%
GATTGCAGAGGTGGCCATGA+GGG - chr5_2:75124962-75124981 None:intergenic 55.0%
TCAGCATTCACCGGCAAGAC+TGG + chr5_2:75124988-75125007 Msa0788450:CDS 55.0%
CCAAGTACTTGGGACGGTCA+GGG - chr5_2:75125441-75125460 None:intergenic 55.0%
CCTGACCGTCCCAAGTACTT+GGG + chr5_2:75125439-75125458 Msa0788450:CDS 55.0%
GTGTCCCATCCATAGTCACC+AGG - chr5_2:75125508-75125527 None:intergenic 55.0%
GACTATGGATGGGACACAGC+TGG + chr5_2:75125511-75125530 Msa0788450:CDS 55.0%
!! CACAGCAGATGGGCTATGCT+TGG + chr5_2:75125586-75125605 Msa0788450:CDS 55.0%
CGGTGAGGCTGTGTGGTTTA+AGG + chr5_2:75125660-75125679 Msa0788450:CDS 55.0%
! GAGGCTGTGTGGTTTAAGGC+TGG + chr5_2:75125664-75125683 Msa0788450:CDS 55.0%
TGGTGCCCAGATCTTCTCAG+AGG + chr5_2:75125684-75125703 Msa0788450:CDS 55.0%
GGTGCCCAGATCTTCTCAGA+GGG + chr5_2:75125685-75125704 Msa0788450:CDS 55.0%
! GCCACCCTCTGAGAAGATCT+GGG - chr5_2:75125692-75125711 None:intergenic 55.0%
GGCTACACAGGTTGTGCTCA+TGG + chr5_2:75125768-75125787 Msa0788450:CDS 55.0%
!! GAAGGCTACAGAGTTGGTGG+AGG + chr5_2:75125799-75125818 Msa0788450:CDS 55.0%
!! AGAGTTGGTGGAGGACCACT+TGG + chr5_2:75125808-75125827 Msa0788450:CDS 55.0%
GGGTCTAGTCCTTCACCAAG+TGG - chr5_2:75125826-75125845 None:intergenic 55.0%
GGACTAGACCCACTATACCC+TGG + chr5_2:75125835-75125854 Msa0788450:CDS 55.0%
CTAGACCCACTATACCCTGG+TGG + chr5_2:75125838-75125857 Msa0788450:CDS 55.0%
AGGCACCACCAGGGTATAGT+GGG - chr5_2:75125846-75125865 None:intergenic 55.0%
! AAGGCACCACCAGGGTATAG+TGG - chr5_2:75125847-75125866 None:intergenic 55.0%
GGGTCATCAGCAAGACCAAG+AGG - chr5_2:75125874-75125893 None:intergenic 55.0%
GGAACTCAAGAACGGCCGAT+TGG + chr5_2:75125921-75125940 Msa0788450:CDS 55.0%
AGGGCCCTTGCCAGTAACAA+TGG - chr5_2:75125980-75125999 None:intergenic 55.0%
CTTGGCGTTCTCATTGTCCG+GGG - chr5_2:75126074-75126093 None:intergenic 55.0%
CTCAAGAGGCCACCATGTCT+TGG - chr5_2:75126092-75126111 None:intergenic 55.0%
GGATTGCAGAGGTGGCCATG+AGG - chr5_2:75124963-75124982 None:intergenic 60.0%
CCCTGACCGTCCCAAGTACT+TGG + chr5_2:75125438-75125457 Msa0788450:CDS 60.0%
CCCAAGTACTTGGGACGGTC+AGG - chr5_2:75125442-75125461 None:intergenic 60.0%
GCCCAGATCTTCTCAGAGGG+TGG + chr5_2:75125688-75125707 Msa0788450:CDS 60.0%
! GGCCACCCTCTGAGAAGATC+TGG - chr5_2:75125693-75125712 None:intergenic 60.0%
! GGTGGAGGACCACTTGGTGA+AGG + chr5_2:75125814-75125833 Msa0788450:CDS 60.0%
!! GAGGGTCAAAGGCACCACCA+GGG - chr5_2:75125855-75125874 None:intergenic 60.0%
!! AGAGGGTCAAAGGCACCACC+AGG - chr5_2:75125856-75125875 None:intergenic 60.0%
GGTGGTGCCTTTGACCCTCT+TGG + chr5_2:75125856-75125875 Msa0788450:CDS 60.0%
TGGCGACAGGGTCAGCAACA+TGG - chr5_2:75126020-75126039 None:intergenic 60.0%
ACCCTGTCGCCAACAACGCA+TGG + chr5_2:75126028-75126047 Msa0788450:CDS 60.0%
CCCATGCGTTGTTGGCGACA+GGG - chr5_2:75126032-75126051 None:intergenic 60.0%
CCCTGTCGCCAACAACGCAT+GGG + chr5_2:75126029-75126048 Msa0788450:CDS 60.0%
GGATTGCAGAGGTGGCCATG+AGG - chr5_2:75124963-75124982 None:intergenic 60.0%
CCCTGACCGTCCCAAGTACT+TGG + chr5_2:75125438-75125457 Msa0788450:CDS 60.0%
CCCAAGTACTTGGGACGGTC+AGG - chr5_2:75125442-75125461 None:intergenic 60.0%
GCCCAGATCTTCTCAGAGGG+TGG + chr5_2:75125688-75125707 Msa0788450:CDS 60.0%
! GGCCACCCTCTGAGAAGATC+TGG - chr5_2:75125693-75125712 None:intergenic 60.0%
! GGTGGAGGACCACTTGGTGA+AGG + chr5_2:75125814-75125833 Msa0788450:CDS 60.0%
!! GAGGGTCAAAGGCACCACCA+GGG - chr5_2:75125855-75125874 None:intergenic 60.0%
!! AGAGGGTCAAAGGCACCACC+AGG - chr5_2:75125856-75125875 None:intergenic 60.0%
GGTGGTGCCTTTGACCCTCT+TGG + chr5_2:75125856-75125875 Msa0788450:CDS 60.0%
TGGCGACAGGGTCAGCAACA+TGG - chr5_2:75126020-75126039 None:intergenic 60.0%
ACCCTGTCGCCAACAACGCA+TGG + chr5_2:75126028-75126047 Msa0788450:CDS 60.0%
CCCATGCGTTGTTGGCGACA+GGG - chr5_2:75126032-75126051 None:intergenic 60.0%
CCCTGTCGCCAACAACGCAT+GGG + chr5_2:75126029-75126048 Msa0788450:CDS 60.0%
!! AGGTGGCCATGAGGGCGTTG+AGG - chr5_2:75124954-75124973 None:intergenic 65.0%
GCCCATGCGTTGTTGGCGAC+AGG - chr5_2:75126033-75126052 None:intergenic 65.0%
!! AGGTGGCCATGAGGGCGTTG+AGG - chr5_2:75124954-75124973 None:intergenic 65.0%
GCCCATGCGTTGTTGGCGAC+AGG - chr5_2:75126033-75126052 None:intergenic 65.0%
GGGACGGTCAGGGCCATACC+TGG - chr5_2:75125431-75125450 None:intergenic 70.0%
GGGACGGTCAGGGCCATACC+TGG - chr5_2:75125431-75125450 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 75124905 75126525 75124905 ID=Msa0788450;Name=Msa0788450
chr5_2 mRNA 75124905 75126525 75124905 ID=Msa0788450-mRNA-1;Parent=Msa0788450;Name=Msa0788450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=59|1|1|1|1|1|2|442|265
chr5_2 exon 75124905 75125109 75124905 ID=Msa0788450-mRNA-1:exon:22954;Parent=Msa0788450-mRNA-1
chr5_2 exon 75125432 75126525 75125432 ID=Msa0788450-mRNA-1:exon:22955;Parent=Msa0788450-mRNA-1
chr5_2 five_prime_UTR 75124905 75124963 75124905 ID=Msa0788450-mRNA-1:five_prime_utr;Parent=Msa0788450-mRNA-1
chr5_2 CDS 75124964 75125109 75124964 ID=Msa0788450-mRNA-1:cds;Parent=Msa0788450-mRNA-1
chr5_2 CDS 75125432 75126083 75125432 ID=Msa0788450-mRNA-1:cds;Parent=Msa0788450-mRNA-1
chr5_2 three_prime_UTR 75126084 75126525 75126084 ID=Msa0788450-mRNA-1:three_prime_utr;Parent=Msa0788450-mRNA-1
Gene Sequence

>Msa0788450

ATGGCCACCTCTGCAATCCAACAATCAGCATTCACCGGCAAGACTGGTTTGAAACAAGGAAATGAGTTCATCAGGAAAGCTGGTAACTTTGGTCAAAGTCGCTTCACCATGCGTCGTACTGTGAAGAGTGCTCCTGAGAGCATTTGGTATGGCCCTGACCGTCCCAAGTACTTGGGTCCATTCTCTGAGCAAATTCCATCATACTTGACTGGTGAGTTTCCTGGTGACTATGGATGGGACACAGCTGGATTATCAGCTGATCCTGAAACCTTTGCAAGGAACCGTGAGCTTGAAGTAATTCACAGCAGATGGGCTATGCTTGGTGCATTGGGATGTACCTTCCCTGAGATCCTTGAGAAGAACGGTGTTAAATTCGGTGAGGCTGTGTGGTTTAAGGCTGGTGCCCAGATCTTCTCAGAGGGTGGCCTTGACTATTTGGGCAACCCAAACCTGATCCATGCTCAGAGCATTCTTGCAATCTGGGCTACACAGGTTGTGCTCATGGGATTTGTTGAAGGCTACAGAGTTGGTGGAGGACCACTTGGTGAAGGACTAGACCCACTATACCCTGGTGGTGCCTTTGACCCTCTTGGTCTTGCTGATGACCCTGATGCATTCGCAGAGTTGAAGGTCAAGGAACTCAAGAACGGCCGATTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTTACTGGCAAGGGCCCTGTTCAGAACCTTTACGACCATGTTGCTGACCCTGTCGCCAACAACGCATGGGCATATGCTACTAACTTCGTCCCCGGACAATGA

Protein sequence

>Msa0788450

MATSAIQQSAFTGKTGLKQGNEFIRKAGNFGQSRFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ*