Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458410 | XP_024635521.1 | 95.493 | 355 | 11 | 3 | 1 | 350 | 1 | 355 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458410 | A0A396IUB9 | 95.493 | 355 | 11 | 3 | 1 | 350 | 1 | 355 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa1458410 | 0.808988 | 2.362988e-50 | -8.615850e-47 |
| Msa0021810 | Msa1458410 | 0.802909 | 4.485161e-49 | -8.615850e-47 |
| Msa0032840 | Msa1458410 | -0.815232 | 1.027423e-51 | -8.615850e-47 |
| Msa0114540 | Msa1458410 | -0.807122 | 5.896879e-50 | -8.615850e-47 |
| Msa1406040 | Msa1458410 | 0.807417 | 5.106216e-50 | -8.615850e-47 |
| Msa0618040 | Msa1458410 | 0.814903 | 1.215282e-51 | -8.615850e-47 |
| Msa0620990 | Msa1458410 | 0.809283 | 2.042598e-50 | -8.615850e-47 |
| Msa0703230 | Msa1458410 | 0.803993 | 2.673875e-49 | -8.615850e-47 |
| Msa0186890 | Msa1458410 | 0.802798 | 4.727305e-49 | -8.615850e-47 |
| Msa0222920 | Msa1458410 | 0.808535 | 2.953450e-50 | -8.615850e-47 |
| Msa0230550 | Msa1458410 | -0.806618 | 7.535534e-50 | -8.615850e-47 |
| Msa0413450 | Msa1458410 | 0.823948 | 1.052135e-53 | -8.615850e-47 |
| Msa0467300 | Msa1458410 | 0.804204 | 2.417198e-49 | -8.615850e-47 |
| Msa1012700 | Msa1458410 | 0.802864 | 4.583365e-49 | -8.615850e-47 |
| Msa1054240 | Msa1458410 | 0.815960 | 7.073095e-52 | -8.615850e-47 |
| Msa1082700 | Msa1458410 | 0.811835 | 5.738586e-51 | -8.615850e-47 |
| Msa1094420 | Msa1458410 | 0.800553 | 1.365433e-48 | -8.615850e-47 |
| Msa1097640 | Msa1458410 | 0.803544 | 3.313692e-49 | -8.615850e-47 |
| Msa0242680 | Msa1458410 | 0.806880 | 6.635521e-50 | -8.615850e-47 |
| Msa0485990 | Msa1458410 | 0.815141 | 1.076371e-51 | -8.615850e-47 |
| Msa0541860 | Msa1458410 | 0.803156 | 3.988075e-49 | -8.615850e-47 |
| Msa0542160 | Msa1458410 | 0.802342 | 5.870195e-49 | -8.615850e-47 |
| Msa0880440 | Msa1458410 | 0.802616 | 5.156211e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458410 | MtrunA17_Chr3g0121521 | 95.493 | 355 | 11 | 3 | 1 | 350 | 1 | 355 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1458410 | AT3G23910.1 | 38.692 | 367 | 203 | 6 | 6 | 350 | 14 | 380 | 2.59e-70 | 226 |
| Msa1458410 | AT3G24255.6 | 36.198 | 384 | 216 | 8 | 6 | 360 | 14 | 397 | 1.40e-63 | 209 |
| Msa1458410 | AT3G24255.2 | 37.326 | 359 | 198 | 7 | 6 | 337 | 14 | 372 | 6.82e-63 | 207 |
| Msa1458410 | AT3G24255.1 | 40.345 | 290 | 159 | 2 | 62 | 337 | 401 | 690 | 2.14e-58 | 202 |
| Msa1458410 | AT3G24255.7 | 40.345 | 290 | 159 | 2 | 62 | 337 | 483 | 772 | 4.33e-58 | 202 |
| Msa1458410 | AT3G23910.2 | 42.478 | 226 | 114 | 3 | 141 | 350 | 50 | 275 | 4.04e-55 | 184 |
| Msa1458410 | AT3G24255.8 | 42.654 | 211 | 107 | 2 | 141 | 337 | 50 | 260 | 7.79e-53 | 178 |
Find 75 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATTCACATTTGAAATT+TGG | 0.100664 | tig0039594:+17981 | Msa1458410:five_prime_UTR |
| AAGGGTTTGATTCTTCTTCT+TGG | 0.207084 | tig0039594:-18171 | Msa1458410:intergenic |
| GCAATTGGAACTTGGGAATA+AGG | 0.235791 | tig0039594:+19475 | Msa1458410:intron |
| CATGAATCTAGGCGAAAATT+TGG | 0.266114 | tig0039594:+19254 | Msa1458410:CDS |
| TATGACGTTAAAGGATATTC+AGG | 0.272206 | tig0039594:+19824 | Msa1458410:CDS |
| TCTCATGGTTGGCCAATATT+TGG | 0.273858 | tig0039594:+21571 | Msa1458410:CDS |
| TGAATTGAATTACCGAAATC+TGG | 0.279388 | tig0039594:-18384 | Msa1458410:intergenic |
| TTTCTTCCGTTGATTGATAA+TGG | 0.295499 | tig0039594:+18010 | Msa1458410:exon |
| TATCAATCAACGGAAGAAAA+TGG | 0.321391 | tig0039594:-18006 | Msa1458410:intergenic |
| TGAGACCATTGTAGCTCATT+TGG | 0.323304 | tig0039594:+21519 | Msa1458410:CDS |
| TCTTTACAAAATCCAGATTT+CGG | 0.332313 | tig0039594:+18372 | Msa1458410:CDS |
| AGATGCTTACATAGAGCATT+TGG | 0.354127 | tig0039594:+18472 | Msa1458410:intron |
| TCATCCACGTATATATCATT+TGG | 0.371803 | tig0039594:-21128 | Msa1458410:intergenic |
| CACATTCGTGGAGTAAATCT+TGG | 0.374860 | tig0039594:-18201 | Msa1458410:intergenic |
| GGAGGGGACTATGACGTTAA+AGG | 0.382729 | tig0039594:+19815 | Msa1458410:CDS |
| CAATCAATAACTCATGATTC+AGG | 0.388820 | tig0039594:-19785 | Msa1458410:intergenic |
| TAGATATTCTCTTGAATACT+TGG | 0.402244 | tig0039594:+21489 | Msa1458410:intron |
| ATTGTAGCTCATTTGGTTAG+AGG | 0.418807 | tig0039594:+21526 | Msa1458410:CDS |
| TTCAACGGAGAACCAAATAT+TGG | 0.430959 | tig0039594:-21583 | Msa1458410:intergenic |
| TTCAATCTCTTTAGCAACAT+TGG | 0.434634 | tig0039594:-18528 | Msa1458410:intergenic |
| TGAGTTATTGATTGAAGTGT+TGG | 0.448149 | tig0039594:+19794 | Msa1458410:CDS |
| ACTTAGGTGTCTTGTGGTAA+AGG | 0.448895 | tig0039594:+21359 | Msa1458410:CDS |
| GGAGGCTAAACTTGAAGAGT+TGG | 0.457166 | tig0039594:+18687 | Msa1458410:CDS |
| GTTGAAGCTAATATCAATCA+AGG | 0.459869 | tig0039594:+21600 | Msa1458410:CDS |
| GCCCTCTACCGTTGGCATAT+AGG | 0.460761 | tig0039594:-19718 | Msa1458410:intergenic |
| TTGACAGGTCTAAAAGTGAT+TGG | 0.465270 | tig0039594:+19660 | Msa1458410:CDS |
| TTGATACTGCAAAGTCTGTC+AGG | 0.467306 | tig0039594:+21156 | Msa1458410:CDS |
| GACCTATATGCCAACGGTAG+AGG | 0.482139 | tig0039594:+19716 | Msa1458410:CDS |
| TTGATTGATATTAGCTTCAA+CGG | 0.489420 | tig0039594:-21598 | Msa1458410:intergenic |
| TTACATAGAGCATTTGGAAA+AGG | 0.489688 | tig0039594:+18478 | Msa1458410:CDS |
| GTAGACACCGACATGAATCT+AGG | 0.497575 | tig0039594:+19243 | Msa1458410:CDS |
| TCTTCCTTGTGCTGTACGGA+TGG | 0.499063 | tig0039594:+21716 | Msa1458410:CDS |
| GATAAATGCTGAGGCTAATG+AGG | 0.501176 | tig0039594:+19203 | Msa1458410:CDS |
| TTATTCTTCCTTGTGCTGTA+CGG | 0.505850 | tig0039594:+21712 | Msa1458410:CDS |
| TGAGGGAATTTCTTCAATGC+TGG | 0.506990 | tig0039594:+19221 | Msa1458410:CDS |
| AATCTCTTTAGCAACATTGG+TGG | 0.513534 | tig0039594:-18525 | Msa1458410:intergenic |
| TAAAGGATGCTAACAAATCA+AGG | 0.518759 | tig0039594:+21376 | Msa1458410:CDS |
| ACATTCGTGGAGTAAATCTT+GGG | 0.522932 | tig0039594:-18200 | Msa1458410:intergenic |
| TATTGATTGAAGTGTTGGAG+GGG | 0.531809 | tig0039594:+19799 | Msa1458410:CDS |
| GTGTTGCAGCAATTGGAACT+TGG | 0.533115 | tig0039594:+19467 | Msa1458410:intron |
| CAGATTGACAATGCATTGAC+AGG | 0.537752 | tig0039594:+19645 | Msa1458410:CDS |
| GTTATTGATTGAAGTGTTGG+AGG | 0.538382 | tig0039594:+19797 | Msa1458410:CDS |
| ACCTATATGCCAACGGTAGA+GGG | 0.544751 | tig0039594:+19717 | Msa1458410:CDS |
| TGGTATCTTCAACTCTCTGT+AGG | 0.555959 | tig0039594:-19749 | Msa1458410:intergenic |
| TTCTTTGAATCATATTACAT+CGG | 0.556460 | tig0039594:+18714 | Msa1458410:CDS |
| GAACATGAAGAGCACATTCG+TGG | 0.557107 | tig0039594:-18213 | Msa1458410:intergenic |
| TTTGAATCATATTACATCGG+AGG | 0.568500 | tig0039594:+18717 | Msa1458410:CDS |
| CATGAAATGCCCTCTACCGT+TGG | 0.570086 | tig0039594:-19726 | Msa1458410:intergenic |
| GTGAGACAATTCCAATGTGT+TGG | 0.573331 | tig0039594:+21670 | Msa1458410:CDS |
| ATTCAGGATAGATGCATCCA+TGG | 0.576247 | tig0039594:-19769 | Msa1458410:intergenic |
| GAATCTAGGCGAAAATTTGG+AGG | 0.576882 | tig0039594:+19257 | Msa1458410:CDS |
| GTAAATCTTGGGAATCTGAA+GGG | 0.577091 | tig0039594:-18189 | Msa1458410:intergenic |
| ACATAAAGTTGTCTCATGGT+TGG | 0.580003 | tig0039594:+21560 | Msa1458410:CDS |
| AGTAAATCTTGGGAATCTGA+AGG | 0.582351 | tig0039594:-18190 | Msa1458410:intergenic |
| TCTAACCAAATGAGCTACAA+TGG | 0.590969 | tig0039594:-21524 | Msa1458410:intergenic |
| CAGAAGCAAGTGAACTCCGC+AGG | 0.591758 | tig0039594:+18033 | Msa1458410:CDS |
| GAATTATACTAAGCACACTT+AGG | 0.592429 | tig0039594:+21343 | Msa1458410:CDS |
| TGAAATGAAATCGATTCTGA+AGG | 0.592769 | tig0039594:+19502 | Msa1458410:CDS |
| CTTCTGCCATTATCAATCAA+CGG | 0.595703 | tig0039594:-18016 | Msa1458410:intergenic |
| TTGTATTAACCATTGCAATG+AGG | 0.596339 | tig0039594:-21307 | Msa1458410:intergenic |
| GAAATCGATTCTGAAGGCCA+TGG | 0.598854 | tig0039594:+19508 | Msa1458410:CDS |
| ACATCCATCCGTACAGCACA+AGG | 0.599597 | tig0039594:-21720 | Msa1458410:intergenic |
| TGTTGCAGCAATTGGAACTT+GGG | 0.607267 | tig0039594:+19468 | Msa1458410:intron |
| TTGAAGCTAATATCAATCAA+GGG | 0.620980 | tig0039594:+21601 | Msa1458410:CDS |
| GCAGCAAGTCCTCATTGCAA+TGG | 0.623103 | tig0039594:+21298 | Msa1458410:intron |
| CTTACAATGAAAAGACTCCA+TGG | 0.625561 | tig0039594:-19525 | Msa1458410:intergenic |
| ACAGAGAGTTGAAGATACCA+TGG | 0.630523 | tig0039594:+19752 | Msa1458410:CDS |
| ATAAATGCTGAGGCTAATGA+GGG | 0.636629 | tig0039594:+19204 | Msa1458410:CDS |
| TTATTGATTGAAGTGTTGGA+GGG | 0.637105 | tig0039594:+19798 | Msa1458410:CDS |
| AAGCACACTTAGGTGTCTTG+TGG | 0.641823 | tig0039594:+21353 | Msa1458410:CDS |
| CTCGCGAAAACTCGTAACGA+TGG | 0.646362 | tig0039594:+18554 | Msa1458410:CDS |
| GCATACATAAAGTTGTCTCA+TGG | 0.652475 | tig0039594:+21556 | Msa1458410:CDS |
| ATAGGAGCAGATAAATGCTG+AGG | 0.674029 | tig0039594:+19194 | Msa1458410:intron |
| TTTGCAGACCTATATGCCAA+CGG | 0.681871 | tig0039594:+19710 | Msa1458410:CDS |
| TCATTCTTAACAGAACACAG+TGG | 0.739164 | tig0039594:+18317 | Msa1458410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAATAACAAAAACAAAA+CGG | - | tig0039594:18418-18437 | Msa1458410:intergenic | 15.0% |
| !! | AAGAATTAAGAAAATTGATA+TGG | + | tig0039594:18860-18879 | Msa1458410:intron | 15.0% |
| !! | ATAAATACTTATTGTTAACT+TGG | - | tig0039594:18916-18935 | Msa1458410:intergenic | 15.0% |
| !! | AAAAACATGTTAAATACTTA+GGG | + | tig0039594:18956-18975 | Msa1458410:intron | 15.0% |
| !!! | TAACTTAATGTTTTTATATG+TGG | - | tig0039594:21023-21042 | Msa1458410:intergenic | 15.0% |
| !! | TTTGTTTCACATAATAACTA+TGG | + | tig0039594:18599-18618 | Msa1458410:intron | 20.0% |
| !!! | TTTTTCAGATTCTATTCTTT+TGG | + | tig0039594:18666-18685 | Msa1458410:intron | 20.0% |
| !! | TTCTTTGAATCATATTACAT+CGG | + | tig0039594:18714-18733 | Msa1458410:CDS | 20.0% |
| !! | AGTATTTATATCATATCCAT+TGG | + | tig0039594:18927-18946 | Msa1458410:intron | 20.0% |
| !! | GAAAAACATGTTAAATACTT+AGG | + | tig0039594:18955-18974 | Msa1458410:intron | 20.0% |
| !! | AAAACATGTTAAATACTTAG+GGG | + | tig0039594:18957-18976 | Msa1458410:intron | 20.0% |
| !!! | TCTTTTACAGAAAATCATTT+TGG | + | tig0039594:19386-19405 | Msa1458410:intron | 20.0% |
| !! | ATTCATTCTGATATTCTATT+TGG | + | tig0039594:20155-20174 | Msa1458410:intron | 20.0% |
| !! | GAAAGGGTAATTATAATATT+AGG | + | tig0039594:20841-20860 | Msa1458410:intron | 20.0% |
| !!! | TGATGATTTGTTAACTTTTT+TGG | + | tig0039594:21086-21105 | Msa1458410:intron | 20.0% |
| !!! | CTTTTTTGGTTTTGTTATTT+AGG | + | tig0039594:21100-21119 | Msa1458410:intron | 20.0% |
| !! | GGGTTTAATGTTATTAAATT+TGG | + | tig0039594:21427-21446 | Msa1458410:intron | 20.0% |
| !! | CACAATTCACATTTGAAATT+TGG | + | tig0039594:17981-18000 | Msa1458410:five_prime_UTR | 25.0% |
| ! | TCTTTACAAAATCCAGATTT+CGG | + | tig0039594:18372-18391 | Msa1458410:CDS | 25.0% |
| !!! | TTGATATGGTGTTATATGTT+CGG | + | tig0039594:18874-18893 | Msa1458410:intron | 25.0% |
| !!! | TTAAATACTTAGGGGTATTT+TGG | + | tig0039594:18965-18984 | Msa1458410:intron | 25.0% |
| !!! | CAGTCGTTTTTGATAATTAT+AGG | + | tig0039594:19176-19195 | Msa1458410:intron | 25.0% |
| !! | GAATTAGTTTCAAACAAATG+TGG | + | tig0039594:19336-19355 | Msa1458410:intron | 25.0% |
| !! | TTTACAGAAAATCATTTTGG+TGG | + | tig0039594:19389-19408 | Msa1458410:intron | 25.0% |
| !! | CTTTTCATTGTAAGTTCAAA+TGG | + | tig0039594:19534-19553 | Msa1458410:intron | 25.0% |
| ! | TCAGATAATCATCTATTCTA+TGG | + | tig0039594:19580-19599 | Msa1458410:intron | 25.0% |
| ! | AAACAAGTCAAAGAATGAAA+CGG | - | tig0039594:19865-19884 | Msa1458410:intergenic | 25.0% |
| ! | TTGTCAAATCTAATGAACAA+TGG | - | tig0039594:19895-19914 | Msa1458410:intergenic | 25.0% |
| !!! | TGCTTATTCTGCATTTTTTT+CGG | + | tig0039594:20247-20266 | Msa1458410:intron | 25.0% |
| !! | TTTTACGCATCATTACATAT+TGG | - | tig0039594:20705-20724 | Msa1458410:intergenic | 25.0% |
| ! | AACAGCAAAATATGATGTTA+AGG | - | tig0039594:20793-20812 | Msa1458410:intergenic | 25.0% |
| ! | TCATGTAGAAAACTTATGAA+AGG | + | tig0039594:20824-20843 | Msa1458410:intron | 25.0% |
| ! | CATGTAGAAAACTTATGAAA+GGG | + | tig0039594:20825-20844 | Msa1458410:intron | 25.0% |
| ! | ATTATAATATTAGGTGACGA+AGG | + | tig0039594:20850-20869 | Msa1458410:intron | 25.0% |
| !! | TTTTCCAAATGATATATACG+TGG | + | tig0039594:21124-21143 | Msa1458410:CDS | 25.0% |
| ! | GAATTTACTAAACCTAAACA+AGG | - | tig0039594:21201-21220 | Msa1458410:intergenic | 25.0% |
| ! | GCTTAGTTCATAATGAATTT+GGG | - | tig0039594:21234-21253 | Msa1458410:intergenic | 25.0% |
| ! | TGCTTAGTTCATAATGAATT+TGG | - | tig0039594:21235-21254 | Msa1458410:intergenic | 25.0% |
| ! | TAGATATTCTCTTGAATACT+TGG | + | tig0039594:21489-21508 | Msa1458410:intron | 25.0% |
| !! | TTGATTGATATTAGCTTCAA+CGG | - | tig0039594:21601-21620 | Msa1458410:intergenic | 25.0% |
| ! | TTGAAGCTAATATCAATCAA+GGG | + | tig0039594:21601-21620 | Msa1458410:CDS | 25.0% |
| !!! | ATTTTTTATAGCCAACACAT+TGG | - | tig0039594:21684-21703 | Msa1458410:intergenic | 25.0% |
| TATCAATCAACGGAAGAAAA+TGG | - | tig0039594:18009-18028 | Msa1458410:intergenic | 30.0% | |
| ! | TTTCTTCCGTTGATTGATAA+TGG | + | tig0039594:18010-18029 | Msa1458410:exon | 30.0% |
| TGAATTGAATTACCGAAATC+TGG | - | tig0039594:18387-18406 | Msa1458410:intergenic | 30.0% | |
| ! | TTACATAGAGCATTTGGAAA+AGG | + | tig0039594:18478-18497 | Msa1458410:CDS | 30.0% |
| TTCAATCTCTTTAGCAACAT+TGG | - | tig0039594:18531-18550 | Msa1458410:intergenic | 30.0% | |
| ! | TTCAGATTCTATTCTTTTGG+AGG | + | tig0039594:18669-18688 | Msa1458410:intron | 30.0% |
| TTTGAATCATATTACATCGG+AGG | + | tig0039594:18717-18736 | Msa1458410:CDS | 30.0% | |
| TTCTTGTGATTTAGTCATCT+GGG | - | tig0039594:18845-18864 | Msa1458410:intergenic | 30.0% | |
| ATTCTTGTGATTTAGTCATC+TGG | - | tig0039594:18846-18865 | Msa1458410:intergenic | 30.0% | |
| ! | ACATGTTTTTCTGTAACCAA+TGG | - | tig0039594:18946-18965 | Msa1458410:intergenic | 30.0% |
| ATGTAGTTGAAAATTTCTCG+AGG | + | tig0039594:19002-19021 | Msa1458410:intron | 30.0% | |
| TGTAGTTGAAAATTTCTCGA+GGG | + | tig0039594:19003-19022 | Msa1458410:intron | 30.0% | |
| !! | TTCTCGAGGGTTTTATATAT+AGG | + | tig0039594:19016-19035 | Msa1458410:intron | 30.0% |
| !! | TCTCGAGGGTTTTATATATA+GGG | + | tig0039594:19017-19036 | Msa1458410:intron | 30.0% |
| AATATACATAACTCATGCCA+GGG | - | tig0039594:19089-19108 | Msa1458410:intergenic | 30.0% | |
| GTCAAAACATGATTACTGAA+TGG | - | tig0039594:19157-19176 | Msa1458410:intergenic | 30.0% | |
| AAAAGAAGCAGAAAATGTTC+AGG | - | tig0039594:19372-19391 | Msa1458410:intergenic | 30.0% | |
| ! | TGAAATGAAATCGATTCTGA+AGG | + | tig0039594:19502-19521 | Msa1458410:CDS | 30.0% |
| CAATCAATAACTCATGATTC+AGG | - | tig0039594:19788-19807 | Msa1458410:intergenic | 30.0% | |
| ! | TGAGTTATTGATTGAAGTGT+TGG | + | tig0039594:19794-19813 | Msa1458410:CDS | 30.0% |
| !! | TTATTGATTGAAGTGTTGGA+GGG | + | tig0039594:19798-19817 | Msa1458410:CDS | 30.0% |
| TATGACGTTAAAGGATATTC+AGG | + | tig0039594:19824-19843 | Msa1458410:CDS | 30.0% | |
| AATTACGTTTAGCAATGATG+TGG | + | tig0039594:19913-19932 | Msa1458410:intron | 30.0% | |
| AGTTATAGTGTTAGCCATTT+AGG | + | tig0039594:19980-19999 | Msa1458410:intron | 30.0% | |
| !! | TTTCTTGTGGTATTTTGAAG+TGG | + | tig0039594:20063-20082 | Msa1458410:intron | 30.0% |
| !!! | CTCAATTGCTTTTAGTTTGA+TGG | + | tig0039594:20128-20147 | Msa1458410:intron | 30.0% |
| !!! | GCTTATTCTGCATTTTTTTC+GGG | + | tig0039594:20248-20267 | Msa1458410:intron | 30.0% |
| !! | AATTTGCTGGATATATCATG+TGG | + | tig0039594:20291-20310 | Msa1458410:intron | 30.0% |
| TGATTTATGGTCTGTATTCT+AGG | + | tig0039594:20335-20354 | Msa1458410:intron | 30.0% | |
| !! | AGTTTTAGTACCTTTGTTGT+AGG | + | tig0039594:20568-20587 | Msa1458410:intron | 30.0% |
| GTATTAATCACCTACAACAA+AGG | - | tig0039594:20581-20600 | Msa1458410:intergenic | 30.0% | |
| ! | AATGTTTGGGGTAATGAAAT+TGG | - | tig0039594:20758-20777 | Msa1458410:intergenic | 30.0% |
| ATTCCATCTAGAAATGTTTG+GGG | - | tig0039594:20770-20789 | Msa1458410:intergenic | 30.0% | |
| GATTCCATCTAGAAATGTTT+GGG | - | tig0039594:20771-20790 | Msa1458410:intergenic | 30.0% | |
| TCATCCACGTATATATCATT+TGG | - | tig0039594:21131-21150 | Msa1458410:intergenic | 30.0% | |
| !! | TTTCCTTTTTCTCCTTGTTT+AGG | + | tig0039594:21186-21205 | Msa1458410:intron | 30.0% |
| AAACCTAAACAAGGAGAAAA+AGG | - | tig0039594:21192-21211 | Msa1458410:intergenic | 30.0% | |
| TAGTTCATAATGAATTTGGG+AGG | - | tig0039594:21231-21250 | Msa1458410:intergenic | 30.0% | |
| TTGTATTAACCATTGCAATG+AGG | - | tig0039594:21310-21329 | Msa1458410:intergenic | 30.0% | |
| GAATTATACTAAGCACACTT+AGG | + | tig0039594:21343-21362 | Msa1458410:CDS | 30.0% | |
| TAAAGGATGCTAACAAATCA+AGG | + | tig0039594:21376-21395 | Msa1458410:CDS | 30.0% | |
| GTTGAAGCTAATATCAATCA+AGG | + | tig0039594:21600-21619 | Msa1458410:CDS | 30.0% | |
| GTGTTAAAAAAGTTCTCATG+TGG | + | tig0039594:21741-21760 | Msa1458410:exon | 30.0% | |
| CTTCTGCCATTATCAATCAA+CGG | - | tig0039594:18019-18038 | Msa1458410:intergenic | 35.0% | |
| AAGTGAGAGAGTAACGAAAA+CGG | - | tig0039594:18085-18104 | Msa1458410:intergenic | 35.0% | |
| AGGTTTGGAGAATGTGATAA+CGG | - | tig0039594:18114-18133 | Msa1458410:intergenic | 35.0% | |
| TGAAATTCGACTGAAAGGAA+AGG | - | tig0039594:18134-18153 | Msa1458410:intergenic | 35.0% | |
| ATCTGTGAAATTCGACTGAA+AGG | - | tig0039594:18139-18158 | Msa1458410:intergenic | 35.0% | |
| AAGGGTTTGATTCTTCTTCT+TGG | - | tig0039594:18174-18193 | Msa1458410:intergenic | 35.0% | |
| GTAAATCTTGGGAATCTGAA+GGG | - | tig0039594:18192-18211 | Msa1458410:intergenic | 35.0% | |
| AGTAAATCTTGGGAATCTGA+AGG | - | tig0039594:18193-18212 | Msa1458410:intergenic | 35.0% | |
| ACATTCGTGGAGTAAATCTT+GGG | - | tig0039594:18203-18222 | Msa1458410:intergenic | 35.0% | |
| GAAAATTGAAGAATGTGCGT+AGG | - | tig0039594:18245-18264 | Msa1458410:intergenic | 35.0% | |
| TCATTCTTAACAGAACACAG+TGG | + | tig0039594:18317-18336 | Msa1458410:intron | 35.0% | |
| ! | AGATGCTTACATAGAGCATT+TGG | + | tig0039594:18472-18491 | Msa1458410:intron | 35.0% |
| AATCTCTTTAGCAACATTGG+TGG | - | tig0039594:18528-18547 | Msa1458410:intergenic | 35.0% | |
| !! | GAGGGTTTTATATATAGGGA+AGG | + | tig0039594:19021-19040 | Msa1458410:intron | 35.0% |
| TATGCCTATGCTCATTATGA+TGG | + | tig0039594:19055-19074 | Msa1458410:intron | 35.0% | |
| CAATATACATAACTCATGCC+AGG | - | tig0039594:19090-19109 | Msa1458410:intergenic | 35.0% | |
| ATAAATGCTGAGGCTAATGA+GGG | + | tig0039594:19204-19223 | Msa1458410:CDS | 35.0% | |
| ! | ATTTTCGCCTAGATTCATGT+CGG | - | tig0039594:19253-19272 | Msa1458410:intergenic | 35.0% |
| CATGAATCTAGGCGAAAATT+TGG | + | tig0039594:19254-19273 | Msa1458410:CDS | 35.0% | |
| CAATTGCTGCAACACATAAA+AGG | - | tig0039594:19462-19481 | Msa1458410:intergenic | 35.0% | |
| ! | CTTTTATGTGTTGCAGCAAT+TGG | + | tig0039594:19460-19479 | Msa1458410:intron | 35.0% |
| CTTACAATGAAAAGACTCCA+TGG | - | tig0039594:19528-19547 | Msa1458410:intergenic | 35.0% | |
| ! | TAAAGCATCAAACCTGAAAG+GGG | - | tig0039594:19622-19641 | Msa1458410:intergenic | 35.0% |
| ! | CTAAAGCATCAAACCTGAAA+GGG | - | tig0039594:19623-19642 | Msa1458410:intergenic | 35.0% |
| ! | TCTAAAGCATCAAACCTGAA+AGG | - | tig0039594:19624-19643 | Msa1458410:intergenic | 35.0% |
| TTGACAGGTCTAAAAGTGAT+TGG | + | tig0039594:19660-19679 | Msa1458410:CDS | 35.0% | |
| !! | GTTATTGATTGAAGTGTTGG+AGG | + | tig0039594:19797-19816 | Msa1458410:CDS | 35.0% |
| !! | TATTGATTGAAGTGTTGGAG+GGG | + | tig0039594:19799-19818 | Msa1458410:CDS | 35.0% |
| ! | CTTTTTCCTGACAGATTTGA+TGG | - | tig0039594:19956-19975 | Msa1458410:intergenic | 35.0% |
| ATAGTGTTAGCCATTTAGGT+AGG | + | tig0039594:19984-20003 | Msa1458410:intron | 35.0% | |
| AAAAGCCTTTCACAGTTCAT+AGG | - | tig0039594:20012-20031 | Msa1458410:intergenic | 35.0% | |
| !! | TGCTTTGAAGTTGTTTCTTG+TGG | + | tig0039594:20050-20069 | Msa1458410:intron | 35.0% |
| !!! | ATTCTGCATTTTTTTCGGGA+TGG | + | tig0039594:20252-20271 | Msa1458410:intron | 35.0% |
| !!! | TTCTGCATTTTTTTCGGGAT+GGG | + | tig0039594:20253-20272 | Msa1458410:intron | 35.0% |
| ATATCATGTGGTTACATCAG+TGG | + | tig0039594:20303-20322 | Msa1458410:intron | 35.0% | |
| TATCATGTGGTTACATCAGT+GGG | + | tig0039594:20304-20323 | Msa1458410:intron | 35.0% | |
| !!! | GTGGGTTTGCTTTTGATTTA+TGG | + | tig0039594:20322-20341 | Msa1458410:intron | 35.0% |
| !!! | GGGGTATTTTGGTATATATG+CGG | - | tig0039594:20400-20419 | Msa1458410:intergenic | 35.0% |
| AAAATACCAAAATACCCCCA+TGG | - | tig0039594:20481-20500 | Msa1458410:intergenic | 35.0% | |
| TGTGCTGTACTTGTAGAATT+TGG | + | tig0039594:20612-20631 | Msa1458410:intron | 35.0% | |
| CGCATCATTACATATTGGAT+GGG | - | tig0039594:20700-20719 | Msa1458410:intergenic | 35.0% | |
| ACGCATCATTACATATTGGA+TGG | - | tig0039594:20701-20720 | Msa1458410:intergenic | 35.0% | |
| AATGATCCTTCTACCAAACT+GGG | - | tig0039594:20733-20752 | Msa1458410:intergenic | 35.0% | |
| AAATGATCCTTCTACCAAAC+TGG | - | tig0039594:20734-20753 | Msa1458410:intergenic | 35.0% | |
| ! | TTACCCCAAACATTTCTAGA+TGG | + | tig0039594:20764-20783 | Msa1458410:intron | 35.0% |
| GGATTCCATCTAGAAATGTT+TGG | - | tig0039594:20772-20791 | Msa1458410:intergenic | 35.0% | |
| CTAAAGGAAGAGATTAGGAA+CGG | - | tig0039594:20949-20968 | Msa1458410:intergenic | 35.0% | |
| ATAATGAATTTGGGAGGAGA+GGG | - | tig0039594:21225-21244 | Msa1458410:intergenic | 35.0% | |
| TGACTGTAATGTAGTCCTTT+CGG | + | tig0039594:21401-21420 | Msa1458410:intron | 35.0% | |
| TAATGTAGTCCTTTCGGTTT+GGG | + | tig0039594:21407-21426 | Msa1458410:intron | 35.0% | |
| AACATTAAACCCAAACCGAA+AGG | - | tig0039594:21419-21438 | Msa1458410:intergenic | 35.0% | |
| TCTAACCAAATGAGCTACAA+TGG | - | tig0039594:21527-21546 | Msa1458410:intergenic | 35.0% | |
| ATTGTAGCTCATTTGGTTAG+AGG | + | tig0039594:21526-21545 | Msa1458410:CDS | 35.0% | |
| GCATACATAAAGTTGTCTCA+TGG | + | tig0039594:21556-21575 | Msa1458410:CDS | 35.0% | |
| ACATAAAGTTGTCTCATGGT+TGG | + | tig0039594:21560-21579 | Msa1458410:CDS | 35.0% | |
| TTCAACGGAGAACCAAATAT+TGG | - | tig0039594:21586-21605 | Msa1458410:intergenic | 35.0% | |
| TTATTCTTCCTTGTGCTGTA+CGG | + | tig0039594:21712-21731 | Msa1458410:CDS | 35.0% | |
| AGAGTAACGAAAACGGAGAA+AGG | - | tig0039594:18078-18097 | Msa1458410:intergenic | 40.0% | |
| TTCGACTGAAAGGAAAGGTT+TGG | - | tig0039594:18129-18148 | Msa1458410:intergenic | 40.0% | |
| CACATTCGTGGAGTAAATCT+TGG | - | tig0039594:18204-18223 | Msa1458410:intergenic | 40.0% | |
| GGTTCCATCATAATGAGCAT+AGG | - | tig0039594:19062-19081 | Msa1458410:intergenic | 40.0% | |
| ATCCATCCCTTTGTCTAATG+AGG | + | tig0039594:19118-19137 | Msa1458410:intron | 40.0% | |
| TCCATCCCTTTGTCTAATGA+GGG | + | tig0039594:19119-19138 | Msa1458410:intron | 40.0% | |
| ATAGGAGCAGATAAATGCTG+AGG | + | tig0039594:19194-19213 | Msa1458410:intron | 40.0% | |
| GATAAATGCTGAGGCTAATG+AGG | + | tig0039594:19203-19222 | Msa1458410:CDS | 40.0% | |
| TGAGGGAATTTCTTCAATGC+TGG | + | tig0039594:19221-19240 | Msa1458410:CDS | 40.0% | |
| GAATCTAGGCGAAAATTTGG+AGG | + | tig0039594:19257-19276 | Msa1458410:CDS | 40.0% | |
| !!! | GCGTTGGCTGTTATTCTTTT+CGG | + | tig0039594:19309-19328 | Msa1458410:intron | 40.0% |
| TGTTGCAGCAATTGGAACTT+GGG | + | tig0039594:19468-19487 | Msa1458410:intron | 40.0% | |
| GCAATTGGAACTTGGGAATA+AGG | + | tig0039594:19475-19494 | Msa1458410:intron | 40.0% | |
| ! | AAAGCATCAAACCTGAAAGG+GGG | - | tig0039594:19621-19640 | Msa1458410:intergenic | 40.0% |
| ! | CAGATTGACAATGCATTGAC+AGG | + | tig0039594:19645-19664 | Msa1458410:CDS | 40.0% |
| TTTGCAGACCTATATGCCAA+CGG | + | tig0039594:19710-19729 | Msa1458410:CDS | 40.0% | |
| TGGTATCTTCAACTCTCTGT+AGG | - | tig0039594:19752-19771 | Msa1458410:intergenic | 40.0% | |
| ACAGAGAGTTGAAGATACCA+TGG | + | tig0039594:19752-19771 | Msa1458410:CDS | 40.0% | |
| ATTCAGGATAGATGCATCCA+TGG | - | tig0039594:19772-19791 | Msa1458410:intergenic | 40.0% | |
| TACGAACCATCAAATCTGTC+AGG | + | tig0039594:19947-19966 | Msa1458410:intron | 40.0% | |
| TTCATAGGAGCCTACCTAAA+TGG | - | tig0039594:19997-20016 | Msa1458410:intergenic | 40.0% | |
| AGACCTTGACCAATAAAGTC+AGG | + | tig0039594:20105-20124 | Msa1458410:intron | 40.0% | |
| GCAATTGAGCCTGACTTTAT+TGG | - | tig0039594:20117-20136 | Msa1458410:intergenic | 40.0% | |
| !!! | TCTGCATTTTTTTCGGGATG+GGG | + | tig0039594:20254-20273 | Msa1458410:intron | 40.0% |
| GTGTGAATCTCAGAATTTGC+TGG | + | tig0039594:20278-20297 | Msa1458410:intron | 40.0% | |
| ATATACCAAAATACCCCCAG+CGG | + | tig0039594:20403-20422 | Msa1458410:intron | 40.0% | |
| ! | TTTGGTATTTTCGTGACGTG+TGG | + | tig0039594:20490-20509 | Msa1458410:intron | 40.0% |
| ! | TTGGTATTTTCGTGACGTGT+GGG | + | tig0039594:20491-20510 | Msa1458410:intron | 40.0% |
| GCGTAAAAAAGATCCCAGTT+TGG | + | tig0039594:20717-20736 | Msa1458410:intron | 40.0% | |
| AAAGATCCCAGTTTGGTAGA+AGG | + | tig0039594:20724-20743 | Msa1458410:intron | 40.0% | |
| CGTTCCTAATCTCTTCCTTT+AGG | + | tig0039594:20947-20966 | Msa1458410:intron | 40.0% | |
| TCCTAATCTCTTCCTTTAGG+AGG | + | tig0039594:20950-20969 | Msa1458410:intron | 40.0% | |
| TCCTCCTAAAGGAAGAGATT+AGG | - | tig0039594:20954-20973 | Msa1458410:intergenic | 40.0% | |
| ! | TAATCTCTTCCTTTAGGAGG+AGG | + | tig0039594:20953-20972 | Msa1458410:intron | 40.0% |
| ATTCAACAACCTCCTCCTAA+AGG | - | tig0039594:20965-20984 | Msa1458410:intergenic | 40.0% | |
| TTGATACTGCAAAGTCTGTC+AGG | + | tig0039594:21156-21175 | Msa1458410:CDS | 40.0% | |
| CATAATGAATTTGGGAGGAG+AGG | - | tig0039594:21226-21245 | Msa1458410:intergenic | 40.0% | |
| ACTTAGGTGTCTTGTGGTAA+AGG | + | tig0039594:21359-21378 | Msa1458410:CDS | 40.0% | |
| GTAATGTAGTCCTTTCGGTT+TGG | + | tig0039594:21406-21425 | Msa1458410:intron | 40.0% | |
| TGAGACCATTGTAGCTCATT+TGG | + | tig0039594:21519-21538 | Msa1458410:CDS | 40.0% | |
| ! | TCTCATGGTTGGCCAATATT+TGG | + | tig0039594:21571-21590 | Msa1458410:CDS | 40.0% |
| ! | AAGTTTTCTCTGCGAAGTAG+AGG | + | tig0039594:21648-21667 | Msa1458410:CDS | 40.0% |
| GTGAGACAATTCCAATGTGT+TGG | + | tig0039594:21670-21689 | Msa1458410:CDS | 40.0% | |
| !! | AGGAAGGAAGAAAGTACCTG+CGG | - | tig0039594:18052-18071 | Msa1458410:intergenic | 45.0% |
| AAACGGAGAAAGGAGAAGGA+AGG | - | tig0039594:18068-18087 | Msa1458410:intergenic | 45.0% | |
| ACGAAAACGGAGAAAGGAGA+AGG | - | tig0039594:18072-18091 | Msa1458410:intergenic | 45.0% | |
| ! | GAACATGAAGAGCACATTCG+TGG | - | tig0039594:18216-18235 | Msa1458410:intergenic | 45.0% |
| GGAGGCTAAACTTGAAGAGT+TGG | + | tig0039594:18687-18706 | Msa1458410:CDS | 45.0% | |
| ! | TGCTCATTATGATGGAACCC+TGG | + | tig0039594:19063-19082 | Msa1458410:intron | 45.0% |
| CCATCCCTTTGTCTAATGAG+GGG | + | tig0039594:19120-19139 | Msa1458410:intron | 45.0% | |
| CCTTCCCCTCATTAGACAAA+GGG | - | tig0039594:19127-19146 | Msa1458410:intergenic | 45.0% | |
| CCTTTGTCTAATGAGGGGAA+GGG | + | tig0039594:19125-19144 | Msa1458410:intron | 45.0% | |
| CTTTGTCTAATGAGGGGAAG+GGG | + | tig0039594:19126-19145 | Msa1458410:intron | 45.0% | |
| GTAGACACCGACATGAATCT+AGG | + | tig0039594:19243-19262 | Msa1458410:CDS | 45.0% | |
| GTGTTGCAGCAATTGGAACT+TGG | + | tig0039594:19467-19486 | Msa1458410:intron | 45.0% | |
| ! | GAAATCGATTCTGAAGGCCA+TGG | + | tig0039594:19508-19527 | Msa1458410:CDS | 45.0% |
| ACCTATATGCCAACGGTAGA+GGG | + | tig0039594:19717-19736 | Msa1458410:CDS | 45.0% | |
| AGGCTCCTATGAACTGTGAA+AGG | + | tig0039594:20004-20023 | Msa1458410:intron | 45.0% | |
| GAGCCTGACTTTATTGGTCA+AGG | - | tig0039594:20111-20130 | Msa1458410:intergenic | 45.0% | |
| !!! | CTGCATTTTTTTCGGGATGG+GGG | + | tig0039594:20255-20274 | Msa1458410:intron | 45.0% |
| !!! | TGCATTTTTTTCGGGATGGG+GGG | + | tig0039594:20256-20275 | Msa1458410:intron | 45.0% |
| !!! | TAACTGCCATGGGGGTATTT+TGG | + | tig0039594:20472-20491 | Msa1458410:intron | 45.0% |
| TAACGCTTCACATGTGATCC+TGG | + | tig0039594:20896-20915 | Msa1458410:intron | 45.0% | |
| GAGGAGGTTGTTGAATGCTT+TGG | + | tig0039594:20969-20988 | Msa1458410:intron | 45.0% | |
| AAGCACACTTAGGTGTCTTG+TGG | + | tig0039594:21353-21372 | Msa1458410:CDS | 45.0% | |
| CTCGCGAAAACTCGTAACGA+TGG | + | tig0039594:18554-18573 | Msa1458410:CDS | 50.0% | |
| CCCCTCATTAGACAAAGGGA+TGG | - | tig0039594:19123-19142 | Msa1458410:intergenic | 50.0% | |
| CCCTTTGTCTAATGAGGGGA+AGG | + | tig0039594:19124-19143 | Msa1458410:intron | 50.0% | |
| CCCTTCCCCTCATTAGACAA+AGG | - | tig0039594:19128-19147 | Msa1458410:intergenic | 50.0% | |
| GATGACTACGCCACACTACT+TGG | + | tig0039594:19287-19306 | Msa1458410:intron | 50.0% | |
| CTCATCTTGTTCCCCCTTTC+AGG | + | tig0039594:19607-19626 | Msa1458410:intron | 50.0% | |
| GACCTATATGCCAACGGTAG+AGG | + | tig0039594:19716-19735 | Msa1458410:CDS | 50.0% | |
| CATGAAATGCCCTCTACCGT+TGG | - | tig0039594:19729-19748 | Msa1458410:intergenic | 50.0% | |
| GGAGGGGACTATGACGTTAA+AGG | + | tig0039594:19815-19834 | Msa1458410:CDS | 50.0% | |
| AAATGATGTTGGGGAGCGAG+CGG | - | tig0039594:20439-20458 | Msa1458410:intergenic | 50.0% | |
| CCGTTCGGCAAATGATGTTG+GGG | - | tig0039594:20448-20467 | Msa1458410:intergenic | 50.0% | |
| CCCCAACATCATTTGCCGAA+CGG | + | tig0039594:20445-20464 | Msa1458410:intron | 50.0% | |
| GCCGTTCGGCAAATGATGTT+GGG | - | tig0039594:20449-20468 | Msa1458410:intergenic | 50.0% | |
| TGCCGTTCGGCAAATGATGT+TGG | - | tig0039594:20450-20469 | Msa1458410:intergenic | 50.0% | |
| CATGGCAGTTAACTGCCGTT+CGG | - | tig0039594:20463-20482 | Msa1458410:intergenic | 50.0% | |
| GAACGGCAGTTAACTGCCAT+GGG | + | tig0039594:20462-20481 | Msa1458410:intron | 50.0% | |
| AACGGCAGTTAACTGCCATG+GGG | + | tig0039594:20463-20482 | Msa1458410:intron | 50.0% | |
| ! | GTGACGTGTGGGAGCATAAA+TGG | + | tig0039594:20502-20521 | Msa1458410:intron | 50.0% |
| ! | ATGTGTTGCTGTGCTTTGCC+AGG | - | tig0039594:20917-20936 | Msa1458410:intergenic | 50.0% |
| !! | TGCAATGAGGACTTGCTGCA+TGG | - | tig0039594:21297-21316 | Msa1458410:intergenic | 50.0% |
| GCAGCAAGTCCTCATTGCAA+TGG | + | tig0039594:21298-21317 | Msa1458410:intron | 50.0% | |
| TCTTCCTTGTGCTGTACGGA+TGG | + | tig0039594:21716-21735 | Msa1458410:CDS | 50.0% | |
| ACATCCATCCGTACAGCACA+AGG | - | tig0039594:21723-21742 | Msa1458410:intergenic | 50.0% | |
| CAGAAGCAAGTGAACTCCGC+AGG | + | tig0039594:18033-18052 | Msa1458410:CDS | 55.0% | |
| ! | TTATGATGGAACCCTGGCCC+TGG | + | tig0039594:19069-19088 | Msa1458410:intron | 55.0% |
| CATAACTCATGCCAGGGCCA+GGG | - | tig0039594:19083-19102 | Msa1458410:intergenic | 55.0% | |
| ACATAACTCATGCCAGGGCC+AGG | - | tig0039594:19084-19103 | Msa1458410:intergenic | 55.0% | |
| TACGCCACACTACTTGGCGT+TGG | + | tig0039594:19293-19312 | Msa1458410:intron | 55.0% | |
| ACAGCCAACGCCAAGTAGTG+TGG | - | tig0039594:19300-19319 | Msa1458410:intergenic | 55.0% | |
| GCCCTCTACCGTTGGCATAT+AGG | - | tig0039594:19721-19740 | Msa1458410:intergenic | 55.0% | |
| !!! | AACTGCCGCTGGGGGTATTT+TGG | - | tig0039594:20411-20430 | Msa1458410:intergenic | 55.0% |
| CGAACGGCAGTTAACTGCCA+TGG | + | tig0039594:20461-20480 | Msa1458410:intron | 55.0% | |
| ACGGCAGTTAACTGCCATGG+GGG | + | tig0039594:20464-20483 | Msa1458410:intron | 55.0% | |
| AGCGGCAGTTAACTGCCGCT+GGG | - | tig0039594:20421-20440 | Msa1458410:intergenic | 60.0% | |
| CGGCAGTTAACTGCCGCTGG+GGG | - | tig0039594:20419-20438 | Msa1458410:intergenic | 65.0% | |
| GCGGCAGTTAACTGCCGCTG+GGG | - | tig0039594:20420-20439 | Msa1458410:intergenic | 65.0% | |
| GAGCGGCAGTTAACTGCCGC+TGG | - | tig0039594:20422-20441 | Msa1458410:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0039594 | gene | 17965 | 21770 | 17965 | ID=Msa1458410;Name=Msa1458410 |
| tig0039594 | mRNA | 17965 | 21770 | 17965 | ID=Msa1458410-mRNA-1;Parent=Msa1458410;Name=Msa1458410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=64|0.9|0.90|1|0.8|0.81|11|23|375 |
| tig0039594 | exon | 17965 | 18054 | 17965 | ID=Msa1458410-mRNA-1:exon:21743;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 18144 | 18237 | 18144 | ID=Msa1458410-mRNA-1:exon:21744;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 18330 | 18393 | 18330 | ID=Msa1458410-mRNA-1:exon:21745;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 18474 | 18575 | 18474 | ID=Msa1458410-mRNA-1:exon:21746;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 18674 | 18738 | 18674 | ID=Msa1458410-mRNA-1:exon:21747;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 19198 | 19278 | 19198 | ID=Msa1458410-mRNA-1:exon:21748;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 19476 | 19546 | 19476 | ID=Msa1458410-mRNA-1:exon:21749;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 19629 | 19845 | 19629 | ID=Msa1458410-mRNA-1:exon:21750;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 21122 | 21177 | 21122 | ID=Msa1458410-mRNA-1:exon:21751;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 21302 | 21397 | 21302 | ID=Msa1458410-mRNA-1:exon:21752;Parent=Msa1458410-mRNA-1 |
| tig0039594 | exon | 21492 | 21770 | 21492 | ID=Msa1458410-mRNA-1:exon:21753;Parent=Msa1458410-mRNA-1 |
| tig0039594 | five_prime_UTR | 17965 | 18028 | 17965 | ID=Msa1458410-mRNA-1:five_prime_utr;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 18029 | 18054 | 18029 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 18144 | 18237 | 18144 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 18330 | 18393 | 18330 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 18474 | 18575 | 18474 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 18674 | 18738 | 18674 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 19198 | 19278 | 19198 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 19476 | 19546 | 19476 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 19629 | 19845 | 19629 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 21122 | 21177 | 21122 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 21302 | 21397 | 21302 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | CDS | 21492 | 21747 | 21492 | ID=Msa1458410-mRNA-1:cds;Parent=Msa1458410-mRNA-1 |
| tig0039594 | three_prime_UTR | 21748 | 21770 | 21748 | ID=Msa1458410-mRNA-1:three_prime_utr;Parent=Msa1458410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
