Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012700 | XP_003622081.1 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 4.39e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012700 | B7FIQ2 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 2.10e-123 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa1012700 | 0.825197 | 5.344338e-54 | -8.615850e-47 |
| Msa0016670 | Msa1012700 | 0.872769 | 2.465222e-67 | -8.615850e-47 |
| Msa0017510 | Msa1012700 | 0.815577 | 8.608426e-52 | -8.615850e-47 |
| Msa0021810 | Msa1012700 | 0.825569 | 4.363324e-54 | -8.615850e-47 |
| Msa0024680 | Msa1012700 | 0.818089 | 2.351565e-52 | -8.615850e-47 |
| Msa0032840 | Msa1012700 | -0.843551 | 1.307348e-58 | -8.615850e-47 |
| Msa0036430 | Msa1012700 | 0.837286 | 5.686464e-57 | -8.615850e-47 |
| Msa0044020 | Msa1012700 | 0.805388 | 1.367414e-49 | -8.615850e-47 |
| Msa0046100 | Msa1012700 | 0.815376 | 9.544064e-52 | -8.615850e-47 |
| Msa0046750 | Msa1012700 | 0.816016 | 6.872357e-52 | -8.615850e-47 |
| Msa0053110 | Msa1012700 | 0.809860 | 1.535692e-50 | -8.615850e-47 |
| Msa0072810 | Msa1012700 | 0.837416 | 5.266110e-57 | -8.615850e-47 |
| Msa0073670 | Msa1012700 | 0.826996 | 1.996382e-54 | -8.615850e-47 |
| Msa0074320 | Msa1012700 | 0.812810 | 3.515042e-51 | -8.615850e-47 |
| Msa0081360 | Msa1012700 | 0.821328 | 4.280142e-53 | -8.615850e-47 |
| Msa0081480 | Msa1012700 | 0.821263 | 4.429947e-53 | -8.615850e-47 |
| Msa0084650 | Msa1012700 | 0.806038 | 9.985727e-50 | -8.615850e-47 |
| Msa0090590 | Msa1012700 | 0.821768 | 3.387037e-53 | -8.615850e-47 |
| Msa0095380 | Msa1012700 | 0.816472 | 5.433666e-52 | -8.615850e-47 |
| Msa0103000 | Msa1012700 | 0.850666 | 1.465450e-60 | -8.615850e-47 |
| Msa0105420 | Msa1012700 | 0.808089 | 3.675224e-50 | -8.615850e-47 |
| Msa0110360 | Msa1012700 | 0.827714 | 1.343380e-54 | -8.615850e-47 |
| Msa0110970 | Msa1012700 | 0.862303 | 5.575298e-64 | -8.615850e-47 |
| Msa0114540 | Msa1012700 | -0.831799 | 1.359677e-55 | -8.615850e-47 |
| Msa0115160 | Msa1012700 | 0.803728 | 3.034406e-49 | -8.615850e-47 |
| Msa0120330 | Msa1012700 | 0.820700 | 5.973324e-53 | -8.615850e-47 |
| Msa0607200 | Msa1012700 | 0.810030 | 1.411169e-50 | -8.615850e-47 |
| Msa0609450 | Msa1012700 | 0.841928 | 3.527947e-58 | -8.615850e-47 |
| Msa0616020 | Msa1012700 | 0.800349 | 1.502452e-48 | -8.615850e-47 |
| Msa0618040 | Msa1012700 | 0.830257 | 3.250777e-55 | -8.615850e-47 |
| Msa0620810 | Msa1012700 | 0.802400 | 5.712781e-49 | -8.615850e-47 |
| Msa0623700 | Msa1012700 | 0.804735 | 1.873210e-49 | -8.615850e-47 |
| Msa0647380 | Msa1012700 | 0.804065 | 2.582854e-49 | -8.615850e-47 |
| Msa0650090 | Msa1012700 | 0.852380 | 4.795104e-61 | -8.615850e-47 |
| Msa0654540 | Msa1012700 | 0.817569 | 3.081070e-52 | -8.615850e-47 |
| Msa0669850 | Msa1012700 | 0.800922 | 1.148141e-48 | -8.615850e-47 |
| Msa0677290 | Msa1012700 | 0.843296 | 1.528908e-58 | -8.615850e-47 |
| Msa0680240 | Msa1012700 | 0.828329 | 9.552750e-55 | -8.615850e-47 |
| Msa0684500 | Msa1012700 | 0.817339 | 3.471343e-52 | -8.615850e-47 |
| Msa0692080 | Msa1012700 | 0.864915 | 8.618881e-65 | -8.615850e-47 |
| Msa0696620 | Msa1012700 | 0.820030 | 8.506616e-53 | -8.615850e-47 |
| Msa0701280 | Msa1012700 | 0.832062 | 1.171110e-55 | -8.615850e-47 |
| Msa0703230 | Msa1012700 | 0.812831 | 3.478937e-51 | -8.615850e-47 |
| Msa0715010 | Msa1012700 | -0.800547 | 1.369078e-48 | -8.615850e-47 |
| Msa0734660 | Msa1012700 | 0.803240 | 3.831287e-49 | -8.615850e-47 |
| Msa0738040 | Msa1012700 | 0.806250 | 9.013651e-50 | -8.615850e-47 |
| Msa0747780 | Msa1012700 | 0.803446 | 3.472461e-49 | -8.615850e-47 |
| Msa0755340 | Msa1012700 | 0.805328 | 1.407931e-49 | -8.615850e-47 |
| Msa0776220 | Msa1012700 | 0.801235 | 9.909609e-49 | -8.615850e-47 |
| Msa0785210 | Msa1012700 | 0.815819 | 7.603297e-52 | -8.615850e-47 |
| Msa0787750 | Msa1012700 | 0.809208 | 2.119516e-50 | -8.615850e-47 |
| Msa0813720 | Msa1012700 | 0.827964 | 1.169637e-54 | -8.615850e-47 |
| Msa0813740 | Msa1012700 | 0.804095 | 2.546697e-49 | -8.615850e-47 |
| Msa0842230 | Msa1012700 | 0.804300 | 2.307801e-49 | -8.615850e-47 |
| Msa0124340 | Msa1012700 | 0.817754 | 2.799350e-52 | -8.615850e-47 |
| Msa0130570 | Msa1012700 | 0.835156 | 1.976945e-56 | -8.615850e-47 |
| Msa0134180 | Msa1012700 | 0.806365 | 8.521036e-50 | -8.615850e-47 |
| Msa0143430 | Msa1012700 | 0.834659 | 2.637070e-56 | -8.615850e-47 |
| Msa0147560 | Msa1012700 | 0.825521 | 4.480432e-54 | -8.615850e-47 |
| Msa0157290 | Msa1012700 | 0.815621 | 8.417302e-52 | -8.615850e-47 |
| Msa0168100 | Msa1012700 | 0.805075 | 1.590034e-49 | -8.615850e-47 |
| Msa0172350 | Msa1012700 | 0.827762 | 1.307937e-54 | -8.615850e-47 |
| Msa0172960 | Msa1012700 | -0.836739 | 7.841650e-57 | -8.615850e-47 |
| Msa0183620 | Msa1012700 | 0.800762 | 1.237687e-48 | -8.615850e-47 |
| Msa0183830 | Msa1012700 | 0.825940 | 3.564323e-54 | -8.615850e-47 |
| Msa0186890 | Msa1012700 | 0.817124 | 3.880233e-52 | -8.615850e-47 |
| Msa0187690 | Msa1012700 | 0.815926 | 7.198812e-52 | -8.615850e-47 |
| Msa0187930 | Msa1012700 | 0.811587 | 6.499585e-51 | -8.615850e-47 |
| Msa0193120 | Msa1012700 | 0.809343 | 1.983344e-50 | -8.615850e-47 |
| Msa0194540 | Msa1012700 | 0.819685 | 1.020159e-52 | -8.615850e-47 |
| Msa0197420 | Msa1012700 | 0.807241 | 5.563511e-50 | -8.615850e-47 |
| Msa0199710 | Msa1012700 | 0.818497 | 1.900688e-52 | -8.615850e-47 |
| Msa0218780 | Msa1012700 | 0.809484 | 1.849254e-50 | -8.615850e-47 |
| Msa0222920 | Msa1012700 | 0.815840 | 7.523910e-52 | -8.615850e-47 |
| Msa0223250 | Msa1012700 | 0.803620 | 3.196400e-49 | -8.615850e-47 |
| Msa0230550 | Msa1012700 | -0.843888 | 1.061971e-58 | -8.615850e-47 |
| Msa0376040 | Msa1012700 | 0.811293 | 7.528281e-51 | -8.615850e-47 |
| Msa0378080 | Msa1012700 | 0.804817 | 1.800112e-49 | -8.615850e-47 |
| Msa0387700 | Msa1012700 | 0.822885 | 1.864793e-53 | -8.615850e-47 |
| Msa0395960 | Msa1012700 | 0.805885 | 1.075461e-49 | -8.615850e-47 |
| Msa0402330 | Msa1012700 | 0.812108 | 5.003245e-51 | -8.615850e-47 |
| Msa0413450 | Msa1012700 | 0.801663 | 8.095756e-49 | -8.615850e-47 |
| Msa0414950 | Msa1012700 | -0.818935 | 1.511809e-52 | -8.615850e-47 |
| Msa0419820 | Msa1012700 | 0.832627 | 8.486288e-56 | -8.615850e-47 |
| Msa0422830 | Msa1012700 | 0.807709 | 4.428320e-50 | -8.615850e-47 |
| Msa0422850 | Msa1012700 | 0.830181 | 3.394149e-55 | -8.615850e-47 |
| Msa0422910 | Msa1012700 | 0.813785 | 2.146840e-51 | -8.615850e-47 |
| Msa0422930 | Msa1012700 | 0.824502 | 7.798138e-54 | -8.615850e-47 |
| Msa0424920 | Msa1012700 | 0.809834 | 1.555188e-50 | -8.615850e-47 |
| Msa0425010 | Msa1012700 | 0.801422 | 9.072554e-49 | -8.615850e-47 |
| Msa0425940 | Msa1012700 | 0.839039 | 2.011345e-57 | -8.615850e-47 |
| Msa0426020 | Msa1012700 | 0.831250 | 1.857043e-55 | -8.615850e-47 |
| Msa0426160 | Msa1012700 | 0.830556 | 2.747849e-55 | -8.615850e-47 |
| Msa0436280 | Msa1012700 | -0.815100 | 1.099235e-51 | -8.615850e-47 |
| Msa0436460 | Msa1012700 | 0.803255 | 3.803863e-49 | -8.615850e-47 |
| Msa0436500 | Msa1012700 | 0.806906 | 6.550570e-50 | -8.615850e-47 |
| Msa0441130 | Msa1012700 | 0.822599 | 2.173133e-53 | -8.615850e-47 |
| Msa0443500 | Msa1012700 | 0.815764 | 7.822534e-52 | -8.615850e-47 |
| Msa0461720 | Msa1012700 | 0.821174 | 4.645372e-53 | -8.615850e-47 |
| Msa0467300 | Msa1012700 | 0.804960 | 1.680461e-49 | -8.615850e-47 |
| Msa0468160 | Msa1012700 | 0.800350 | 1.502179e-48 | -8.615850e-47 |
| Msa0469910 | Msa1012700 | -0.800161 | 1.640727e-48 | -8.615850e-47 |
| Msa0996080 | Msa1012700 | 0.805457 | 1.322742e-49 | -8.615850e-47 |
| Msa1000940 | Msa1012700 | 0.803161 | 3.979079e-49 | -8.615850e-47 |
| Msa1003030 | Msa1012700 | 0.810321 | 1.221430e-50 | -8.615850e-47 |
| Msa1008060 | Msa1012700 | -0.805816 | 1.111765e-49 | -8.615850e-47 |
| Msa1012700 | Msa1012810 | 0.848573 | 5.624287e-60 | -8.615850e-47 |
| Msa1012700 | Msa1014270 | 0.803923 | 2.764374e-49 | -8.615850e-47 |
| Msa1012700 | Msa1018790 | 0.829851 | 4.083538e-55 | -8.615850e-47 |
| Msa1012700 | Msa1037920 | 0.814636 | 1.393023e-51 | -8.615850e-47 |
| Msa1012700 | Msa1040830 | 0.819839 | 9.409012e-53 | -8.615850e-47 |
| Msa1012700 | Msa1041530 | 0.835521 | 1.599266e-56 | -8.615850e-47 |
| Msa1012700 | Msa1044340 | 0.842101 | 3.174891e-58 | -8.615850e-47 |
| Msa1012700 | Msa1049010 | 0.811006 | 8.686331e-51 | -8.615850e-47 |
| Msa1012700 | Msa1054240 | 0.865067 | 7.725830e-65 | -8.615850e-47 |
| Msa1012700 | Msa1055260 | 0.805327 | 1.408027e-49 | -8.615850e-47 |
| Msa1012700 | Msa1055280 | 0.806435 | 8.239204e-50 | -8.615850e-47 |
| Msa1012700 | Msa1066490 | 0.804324 | 2.281157e-49 | -8.615850e-47 |
| Msa1012700 | Msa1081150 | 0.804274 | 2.336445e-49 | -8.615850e-47 |
| Msa1012700 | Msa1081570 | 0.818142 | 2.287237e-52 | -8.615850e-47 |
| Msa1012700 | Msa1082700 | 0.837746 | 4.333752e-57 | -8.615850e-47 |
| Msa1012700 | Msa1087810 | 0.800711 | 1.268045e-48 | -8.615850e-47 |
| Msa1012700 | Msa1094420 | 0.913967 | 3.326507e-84 | -8.615850e-47 |
| Msa1012700 | Msa1097640 | 0.827036 | 1.952360e-54 | -8.615850e-47 |
| Msa1012700 | Msa1126510 | 0.821922 | 3.120723e-53 | -8.615850e-47 |
| Msa1012700 | Msa1127140 | 0.820441 | 6.849156e-53 | -8.615850e-47 |
| Msa1012700 | Msa1127890 | 0.820862 | 5.482264e-53 | -8.615850e-47 |
| Msa1012700 | Msa1127950 | 0.806468 | 8.107644e-50 | -8.615850e-47 |
| Msa1012700 | Msa1129980 | 0.802267 | 6.085267e-49 | -8.615850e-47 |
| Msa1012700 | Msa1134110 | 0.855548 | 5.860944e-62 | -8.615850e-47 |
| Msa1012700 | Msa1139810 | 0.847012 | 1.513677e-59 | -8.615850e-47 |
| Msa1012700 | Msa1142970 | 0.802059 | 6.713222e-49 | -8.615850e-47 |
| Msa1012700 | Msa1165870 | 0.802697 | 4.960954e-49 | -8.615850e-47 |
| Msa1012700 | Msa1166400 | 0.826142 | 3.190306e-54 | -8.615850e-47 |
| Msa1012700 | Msa1166860 | 0.815124 | 1.085802e-51 | -8.615850e-47 |
| Msa1012700 | Msa1174010 | 0.803196 | 3.913284e-49 | -8.615850e-47 |
| Msa1012700 | Msa1193950 | -0.807063 | 6.068323e-50 | -8.615850e-47 |
| Msa1012700 | Msa1201650 | 0.804772 | 1.839763e-49 | -8.615850e-47 |
| Msa1012700 | Msa1226620 | 0.819215 | 1.305879e-52 | -8.615850e-47 |
| Msa1012700 | Msa1236100 | 0.821214 | 4.547569e-53 | -8.615850e-47 |
| Msa1012700 | Msa1237030 | 0.815561 | 8.682010e-52 | -8.615850e-47 |
| Msa1012700 | Msa1249870 | 0.817567 | 3.083846e-52 | -8.615850e-47 |
| Msa1012700 | Msa1252190 | 0.813271 | 2.785664e-51 | -8.615850e-47 |
| Msa1012700 | Msa1254610 | 0.807829 | 4.175037e-50 | -8.615850e-47 |
| Msa1012700 | Msa1264020 | 0.806935 | 6.459389e-50 | -8.615850e-47 |
| Msa1012700 | Msa1269580 | -0.813146 | 2.966937e-51 | -8.615850e-47 |
| Msa1012700 | Msa1292830 | 0.823464 | 1.366144e-53 | -8.615850e-47 |
| Msa1012700 | Msa1351760 | 0.831462 | 1.646910e-55 | -8.615850e-47 |
| Msa1012700 | Msa1373330 | 0.815049 | 1.128007e-51 | -8.615850e-47 |
| Msa1012700 | Msa1379570 | 0.813265 | 2.793158e-51 | -8.615850e-47 |
| Msa1012700 | Msa1379990 | 0.814371 | 1.594141e-51 | -8.615850e-47 |
| Msa1012700 | Msa1382310 | 0.806208 | 9.199003e-50 | -8.615850e-47 |
| Msa1012700 | Msa1390310 | 0.829542 | 4.856853e-55 | -8.615850e-47 |
| Msa1012700 | Msa1391590 | 0.806410 | 8.337399e-50 | -8.615850e-47 |
| Msa1012700 | Msa1392200 | 0.812433 | 4.251095e-51 | -8.615850e-47 |
| Msa1012700 | Msa1397810 | 0.809828 | 1.560063e-50 | -8.615850e-47 |
| Msa1012700 | Msa1406040 | 0.812743 | 3.635793e-51 | -8.615850e-47 |
| Msa1012700 | Msa1417870 | 0.807495 | 4.914632e-50 | -8.615850e-47 |
| Msa1012700 | Msa1420060 | 0.819193 | 1.321034e-52 | -8.615850e-47 |
| Msa1012700 | Msa1429360 | -0.812822 | 3.493207e-51 | -8.615850e-47 |
| Msa1012700 | Msa1445100 | 0.802250 | 6.132416e-49 | -8.615850e-47 |
| Msa1012700 | Msa1448510 | 0.804955 | 1.684666e-49 | -8.615850e-47 |
| Msa1012700 | Msa1448690 | 0.811147 | 8.095797e-51 | -8.615850e-47 |
| Msa1012700 | Msa1458410 | 0.802864 | 4.583365e-49 | -8.615850e-47 |
| Msa1012700 | Msa1466990 | 0.816635 | 4.995248e-52 | -8.615850e-47 |
| Msa0238890 | Msa1012700 | 0.814936 | 1.195337e-51 | -8.615850e-47 |
| Msa0241780 | Msa1012700 | 0.821344 | 4.245269e-53 | -8.615850e-47 |
| Msa0241800 | Msa1012700 | 0.850775 | 1.364848e-60 | -8.615850e-47 |
| Msa0242680 | Msa1012700 | 0.803050 | 4.193766e-49 | -8.615850e-47 |
| Msa0244780 | Msa1012700 | 0.807812 | 4.209669e-50 | -8.615850e-47 |
| Msa0257680 | Msa1012700 | 0.813306 | 2.735863e-51 | -8.615850e-47 |
| Msa0264350 | Msa1012700 | 0.815244 | 1.021153e-51 | -8.615850e-47 |
| Msa0264570 | Msa1012700 | 0.808753 | 2.652260e-50 | -8.615850e-47 |
| Msa0267760 | Msa1012700 | 0.831488 | 1.622612e-55 | -8.615850e-47 |
| Msa0268130 | Msa1012700 | 0.819764 | 9.787642e-53 | -8.615850e-47 |
| Msa0280900 | Msa1012700 | 0.826482 | 2.648312e-54 | -8.615850e-47 |
| Msa0292400 | Msa1012700 | 0.800097 | 1.691095e-48 | -8.615850e-47 |
| Msa0294390 | Msa1012700 | 0.826626 | 2.447195e-54 | -8.615850e-47 |
| Msa0298990 | Msa1012700 | 0.811797 | 5.849916e-51 | -8.615850e-47 |
| Msa0306300 | Msa1012700 | 0.822981 | 1.770797e-53 | -8.615850e-47 |
| Msa0308830 | Msa1012700 | 0.816873 | 4.418874e-52 | -8.615850e-47 |
| Msa0317250 | Msa1012700 | 0.808631 | 2.816644e-50 | -8.615850e-47 |
| Msa0320100 | Msa1012700 | 0.829550 | 4.834571e-55 | -8.615850e-47 |
| Msa0328210 | Msa1012700 | 0.802200 | 6.281271e-49 | -8.615850e-47 |
| Msa0332920 | Msa1012700 | 0.829255 | 5.703666e-55 | -8.615850e-47 |
| Msa0339640 | Msa1012700 | 0.811578 | 6.528760e-51 | -8.615850e-47 |
| Msa0349060 | Msa1012700 | 0.800999 | 1.107122e-48 | -8.615850e-47 |
| Msa0355270 | Msa1012700 | 0.814259 | 1.687870e-51 | -8.615850e-47 |
| Msa0358170 | Msa1012700 | 0.802549 | 5.323452e-49 | -8.615850e-47 |
| Msa0485990 | Msa1012700 | 0.829716 | 4.406156e-55 | -8.615850e-47 |
| Msa0507680 | Msa1012700 | 0.800606 | 1.331828e-48 | -8.615850e-47 |
| Msa0508590 | Msa1012700 | 0.818854 | 1.577160e-52 | -8.615850e-47 |
| Msa0508630 | Msa1012700 | 0.825753 | 3.946498e-54 | -8.615850e-47 |
| Msa0516040 | Msa1012700 | 0.809659 | 1.695961e-50 | -8.615850e-47 |
| Msa0516320 | Msa1012700 | 0.819997 | 8.655161e-53 | -8.615850e-47 |
| Msa0521880 | Msa1012700 | 0.831540 | 1.575159e-55 | -8.615850e-47 |
| Msa0526710 | Msa1012700 | 0.829805 | 4.190293e-55 | -8.615850e-47 |
| Msa0535030 | Msa1012700 | 0.808774 | 2.625250e-50 | -8.615850e-47 |
| Msa0535060 | Msa1012700 | 0.807922 | 3.988869e-50 | -8.615850e-47 |
| Msa0541860 | Msa1012700 | 0.819217 | 1.304486e-52 | -8.615850e-47 |
| Msa0546840 | Msa1012700 | 0.800395 | 1.470465e-48 | -8.615850e-47 |
| Msa0555910 | Msa1012700 | 0.841360 | 4.983003e-58 | -8.615850e-47 |
| Msa0574890 | Msa1012700 | 0.815024 | 1.142337e-51 | -8.615850e-47 |
| Msa0576690 | Msa1012700 | 0.813991 | 1.934066e-51 | -8.615850e-47 |
| Msa0576940 | Msa1012700 | 0.802040 | 6.773042e-49 | -8.615850e-47 |
| Msa0579290 | Msa1012700 | 0.807393 | 5.166382e-50 | -8.615850e-47 |
| Msa0579390 | Msa1012700 | 0.803487 | 3.405979e-49 | -8.615850e-47 |
| Msa0591060 | Msa1012700 | 0.819024 | 1.443181e-52 | -8.615850e-47 |
| Msa0591770 | Msa1012700 | 0.819148 | 1.352457e-52 | -8.615850e-47 |
| Msa0850960 | Msa1012700 | 0.836736 | 7.859168e-57 | -8.615850e-47 |
| Msa0863240 | Msa1012700 | 0.808980 | 2.372421e-50 | -8.615850e-47 |
| Msa0864010 | Msa1012700 | 0.809584 | 1.760082e-50 | -8.615850e-47 |
| Msa0872310 | Msa1012700 | 0.840214 | 9.948848e-58 | -8.615850e-47 |
| Msa0880140 | Msa1012700 | 0.817641 | 2.968162e-52 | -8.615850e-47 |
| Msa0883030 | Msa1012700 | 0.806347 | 8.595605e-50 | -8.615850e-47 |
| Msa0890250 | Msa1012700 | 0.807957 | 3.920762e-50 | -8.615850e-47 |
| Msa0896970 | Msa1012700 | 0.823595 | 1.272988e-53 | -8.615850e-47 |
| Msa0905550 | Msa1012700 | 0.829316 | 5.510306e-55 | -8.615850e-47 |
| Msa0930780 | Msa1012700 | 0.812432 | 4.252447e-51 | -8.615850e-47 |
| Msa0936340 | Msa1012700 | 0.808405 | 3.148206e-50 | -8.615850e-47 |
| Msa0937550 | Msa1012700 | 0.832525 | 8.994933e-56 | -8.615850e-47 |
| Msa0965070 | Msa1012700 | 0.809436 | 1.893667e-50 | -8.615850e-47 |
| Msa0968590 | Msa1012700 | 0.802228 | 6.198881e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012700 | MtrunA17_Chr7g0224361 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 4.04e-127 | 353 |
| Msa1012700 | MtrunA17_Chr7g0214211 | 48.322 | 149 | 68 | 5 | 33 | 173 | 26 | 173 | 8.04e-43 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012700 | AT3G26960.1 | 52.381 | 147 | 63 | 3 | 29 | 172 | 30 | 172 | 3.99e-54 | 169 |
| Msa1012700 | AT5G41050.1 | 52.448 | 143 | 65 | 1 | 33 | 172 | 29 | 171 | 1.06e-53 | 168 |
| Msa1012700 | AT5G13140.1 | 48.611 | 144 | 71 | 1 | 33 | 173 | 35 | 178 | 1.68e-48 | 158 |
Find 52 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGACATGTGAATGTTATT+TGG | 0.203795 | 7_1:-18139208 | None:intergenic |
| TGAATATGATAGCTTCTATT+TGG | 0.214277 | 7_1:-18139104 | None:intergenic |
| CTTGGTTTCCCTAGCACTTT+TGG | 0.216215 | 7_1:-18139461 | None:intergenic |
| TCTTGCCAAGCAAATTTAAT+AGG | 0.232515 | 7_1:+18140391 | Msa1012700:CDS |
| GATAGAGAGGAGAGGTAAAT+AGG | 0.267412 | 7_1:-18139130 | None:intergenic |
| TACATAATTAGCCTTGTTCT+TGG | 0.275559 | 7_1:+18140585 | Msa1012700:three_prime_UTR |
| CAAGAGAGTTAGAGGATTCA+TGG | 0.327947 | 7_1:-18139390 | None:intergenic |
| ACCACTGCTTGCAATGTTCC+TGG | 0.329830 | 7_1:+18140421 | Msa1012700:CDS |
| CTTGCCAAGCAAATTTAATA+GGG | 0.333086 | 7_1:+18140392 | Msa1012700:CDS |
| ATTAGATTCATGTAGTTGAT+TGG | 0.348132 | 7_1:+18140873 | Msa1012700:three_prime_UTR |
| AAAATAAGCAAGAGAGTTAG+AGG | 0.355066 | 7_1:-18139398 | None:intergenic |
| AACAGAACAACAAATAAGTA+TGG | 0.359972 | 7_1:+18140301 | Msa1012700:CDS |
| ATTTGAGAGTTAGGAAATCT+TGG | 0.382666 | 7_1:-18139479 | None:intergenic |
| AAATATCATCATATATATAT+AGG | 0.390489 | 7_1:+18140974 | Msa1012700:three_prime_UTR |
| TAGTATGTTATATTAGTATT+CGG | 0.395252 | 7_1:+18140774 | Msa1012700:three_prime_UTR |
| AACTCCCTATTAAATTTGCT+TGG | 0.406122 | 7_1:-18140396 | None:intergenic |
| GTTATGAGTAGGAGAGAGAA+GGG | 0.414239 | 7_1:-18139173 | None:intergenic |
| TTAGATTCATGTAGTTGATT+GGG | 0.420205 | 7_1:+18140874 | Msa1012700:three_prime_UTR |
| ATCACACTGATTTGAGAGTT+AGG | 0.431769 | 7_1:-18139488 | None:intergenic |
| GAAAGAAGGGTAGTTGTTAG+TGG | 0.435260 | 7_1:-18139296 | None:intergenic |
| ATACTAGTTGAAGATGAGTT+TGG | 0.445892 | 7_1:-18139332 | None:intergenic |
| ATGACATCTATGCCCTCAAT+AGG | 0.459599 | 7_1:-18140632 | None:intergenic |
| ATTGAAGTACCATCAGTTGA+TGG | 0.490136 | 7_1:+18140334 | Msa1012700:CDS |
| AGACATAGCTACTTCTTGCC+AGG | 0.496803 | 7_1:+18139554 | Msa1012700:CDS |
| TTTGACTGAAATCACATTAG+CGG | 0.498064 | 7_1:-18140455 | None:intergenic |
| AACTCTCAAATCAGTGTGAT+GGG | 0.512279 | 7_1:+18139491 | Msa1012700:CDS |
| TAACTCTCAAATCAGTGTGA+TGG | 0.513119 | 7_1:+18139490 | Msa1012700:CDS |
| GTGTGTGGATAAAAGAAAGA+AGG | 0.522178 | 7_1:-18139310 | None:intergenic |
| GGTTATGAGTAGGAGAGAGA+AGG | 0.528492 | 7_1:-18139174 | None:intergenic |
| TCATGTAGTTGATTGGGTAC+TGG | 0.539833 | 7_1:+18140880 | Msa1012700:three_prime_UTR |
| CCTGCAAGACCAAAAGTGCT+AGG | 0.546586 | 7_1:+18139452 | Msa1012700:CDS |
| CAAATAAGTATGGAATGTAC+AGG | 0.554772 | 7_1:+18140311 | Msa1012700:CDS |
| GTAGCTCAAGTGGTTGAGCT+AGG | 0.556610 | 7_1:-18140839 | None:intergenic |
| ATAATACATCAAAACAATGA+AGG | 0.563280 | 7_1:-18140670 | None:intergenic |
| TAACTAAGACGTAGCTCAAG+TGG | 0.566079 | 7_1:-18140849 | None:intergenic |
| ATAATTATGTTCAGGTGCTG+AGG | 0.580549 | 7_1:+18140213 | Msa1012700:intron |
| TGTGTGGATAAAAGAAAGAA+GGG | 0.586390 | 7_1:-18139309 | None:intergenic |
| CATCTCACTCCATCAACTGA+TGG | 0.589191 | 7_1:-18140343 | None:intergenic |
| GAATGTTATTTGGCAAGACA+TGG | 0.596689 | 7_1:-18139198 | None:intergenic |
| ATTACTAGTTGCCAAGAACA+AGG | 0.601528 | 7_1:-18140596 | None:intergenic |
| AAGAAGGACACTGGTCTATG+TGG | 0.605551 | 7_1:+18140535 | Msa1012700:CDS |
| TCCAGGAACATTGCAAGCAG+TGG | 0.607145 | 7_1:-18140422 | None:intergenic |
| CTGCAAGACCAAAAGTGCTA+GGG | 0.608365 | 7_1:+18139453 | Msa1012700:CDS |
| ATGTGATTTCAGTCAAAGCA+AGG | 0.609000 | 7_1:+18140461 | Msa1012700:CDS |
| TTTGATTGGATAGAGAGGAG+AGG | 0.615095 | 7_1:-18139138 | None:intergenic |
| AAGACATGGAGGTTATGAGT+AGG | 0.632137 | 7_1:-18139184 | None:intergenic |
| TTATGAGTAGGAGAGAGAAG+GGG | 0.646061 | 7_1:-18139172 | None:intergenic |
| AGACCGTCTAAGAAGGACAC+TGG | 0.652465 | 7_1:+18140526 | Msa1012700:CDS |
| AGACCAGTGTCCTTCTTAGA+CGG | 0.653504 | 7_1:-18140529 | None:intergenic |
| TGTTATTTGGCAAGACATGG+AGG | 0.661162 | 7_1:-18139195 | None:intergenic |
| GATGGAGTGAGATGTGCTGA+AGG | 0.665515 | 7_1:+18140352 | Msa1012700:CDS |
| TTGAAGATGAGTTTGGTGTG+TGG | 0.675313 | 7_1:-18139325 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAAAATATATATATT+TGG | + | chr7_1:18139916-18139935 | Msa1012700:intron | 0.0% |
| !!! | TTTTAAAAAATATATATATT+TGG | + | chr7_1:18139916-18139935 | Msa1012700:intron | 0.0% |
| !!! | TAAATCCTTTAAAAAAATAT+TGG | + | chr7_1:18139663-18139682 | Msa1012700:intron | 10.0% |
| !! | AGAAATTACTATAAATTAAA+AGG | + | chr7_1:18139689-18139708 | Msa1012700:intron | 10.0% |
| !!! | ATGAATGTTTTTAATTTATT+TGG | - | chr7_1:18139805-18139824 | None:intergenic | 10.0% |
| !! | GTATTCTTTATAATAATAAA+AGG | - | chr7_1:18140037-18140056 | None:intergenic | 10.0% |
| !! | AAATATCATCATATATATAT+AGG | + | chr7_1:18140974-18140993 | Msa1012700:three_prime_UTR | 10.0% |
| !!! | TAAATCCTTTAAAAAAATAT+TGG | + | chr7_1:18139663-18139682 | Msa1012700:intron | 10.0% |
| !! | AGAAATTACTATAAATTAAA+AGG | + | chr7_1:18139689-18139708 | Msa1012700:intron | 10.0% |
| !!! | ATGAATGTTTTTAATTTATT+TGG | - | chr7_1:18139805-18139824 | None:intergenic | 10.0% |
| !! | GTATTCTTTATAATAATAAA+AGG | - | chr7_1:18140037-18140056 | None:intergenic | 10.0% |
| !! | AAATATCATCATATATATAT+AGG | + | chr7_1:18140974-18140993 | Msa1012700:three_prime_UTR | 10.0% |
| !! | TTACTATAAATTAAAAGGAT+AGG | + | chr7_1:18139694-18139713 | Msa1012700:intron | 15.0% |
| !! | ATTAAAAACATTCATTAATG+TGG | + | chr7_1:18139810-18139829 | Msa1012700:intron | 15.0% |
| !! | TAGTATGTTATATTAGTATT+CGG | + | chr7_1:18140774-18140793 | Msa1012700:three_prime_UTR | 15.0% |
| !! | TTACTATAAATTAAAAGGAT+AGG | + | chr7_1:18139694-18139713 | Msa1012700:intron | 15.0% |
| !! | ATTAAAAACATTCATTAATG+TGG | + | chr7_1:18139810-18139829 | Msa1012700:intron | 15.0% |
| !! | TAGTATGTTATATTAGTATT+CGG | + | chr7_1:18140774-18140793 | Msa1012700:three_prime_UTR | 15.0% |
| !! | TATAAATTAAAAGGATAGGA+GGG | + | chr7_1:18139698-18139717 | Msa1012700:intron | 20.0% |
| !! | GGATTTAAAAAAGAGATTAA+TGG | + | chr7_1:18139719-18139738 | Msa1012700:intron | 20.0% |
| !! | TTTAAAAAAGAGATTAATGG+TGG | + | chr7_1:18139722-18139741 | Msa1012700:intron | 20.0% |
| !!! | CATTTTACAACTTTTTATCA+AGG | + | chr7_1:18139980-18139999 | Msa1012700:intron | 20.0% |
| !!! | TTTTTTTCTGAAGACAAAAT+TGG | + | chr7_1:18140067-18140086 | Msa1012700:intron | 20.0% |
| !!! | TTTTTTCTGAAGACAAAATT+GGG | + | chr7_1:18140068-18140087 | Msa1012700:intron | 20.0% |
| !! | TTTCTTTCATAATTATGTTC+AGG | + | chr7_1:18140205-18140224 | Msa1012700:intron | 20.0% |
| !! | GTAATTGATCCAAAAAAATA+AGG | + | chr7_1:18140557-18140576 | Msa1012700:exon | 20.0% |
| !!! | TGTAATCTTCCTTATTTTTT+TGG | - | chr7_1:18140569-18140588 | None:intergenic | 20.0% |
| !!! | GCAACTAGTAATATTTTTTT+TGG | + | chr7_1:18140607-18140626 | Msa1012700:three_prime_UTR | 20.0% |
| !! | ATAATACATCAAAACAATGA+AGG | - | chr7_1:18140673-18140692 | None:intergenic | 20.0% |
| !! | TATAAATTAAAAGGATAGGA+GGG | + | chr7_1:18139698-18139717 | Msa1012700:intron | 20.0% |
| !! | GGATTTAAAAAAGAGATTAA+TGG | + | chr7_1:18139719-18139738 | Msa1012700:intron | 20.0% |
| !! | TTTAAAAAAGAGATTAATGG+TGG | + | chr7_1:18139722-18139741 | Msa1012700:intron | 20.0% |
| !!! | CATTTTACAACTTTTTATCA+AGG | + | chr7_1:18139980-18139999 | Msa1012700:intron | 20.0% |
| !!! | TTTTTTTCTGAAGACAAAAT+TGG | + | chr7_1:18140067-18140086 | Msa1012700:intron | 20.0% |
| !!! | TTTTTTCTGAAGACAAAATT+GGG | + | chr7_1:18140068-18140087 | Msa1012700:intron | 20.0% |
| !! | TTTCTTTCATAATTATGTTC+AGG | + | chr7_1:18140205-18140224 | Msa1012700:intron | 20.0% |
| !! | GTAATTGATCCAAAAAAATA+AGG | + | chr7_1:18140557-18140576 | Msa1012700:exon | 20.0% |
| !!! | TGTAATCTTCCTTATTTTTT+TGG | - | chr7_1:18140569-18140588 | None:intergenic | 20.0% |
| !!! | GCAACTAGTAATATTTTTTT+TGG | + | chr7_1:18140607-18140626 | Msa1012700:three_prime_UTR | 20.0% |
| !! | ATAATACATCAAAACAATGA+AGG | - | chr7_1:18140673-18140692 | None:intergenic | 20.0% |
| ! | AAAGACATGTGAATGTTATT+TGG | - | chr7_1:18139211-18139230 | None:intergenic | 25.0% |
| !! | TCAAACTTTTTGCTTGAAAT+CGG | + | chr7_1:18139269-18139288 | Msa1012700:five_prime_UTR | 25.0% |
| ! | GGTTATTCAAAATTATTACC+TGG | - | chr7_1:18139575-18139594 | None:intergenic | 25.0% |
| ! | ACACTCTATTTGAACTATTT+CGG | - | chr7_1:18139636-18139655 | None:intergenic | 25.0% |
| !!! | CTCGTCCAATATTTTTTTAA+AGG | - | chr7_1:18139671-18139690 | None:intergenic | 25.0% |
| ! | CTATAAATTAAAAGGATAGG+AGG | + | chr7_1:18139697-18139716 | Msa1012700:intron | 25.0% |
| ! | TTATATGTGCAAAGATGTTT+CGG | + | chr7_1:18139855-18139874 | Msa1012700:intron | 25.0% |
| !!! | TTTTTCTGAAGACAAAATTG+GGG | + | chr7_1:18140069-18140088 | Msa1012700:intron | 25.0% |
| !! | TAGTTTAACTTTCGTAGAAA+TGG | - | chr7_1:18140140-18140159 | None:intergenic | 25.0% |
| !! | ACTAATTTTTGTTAACTCAG+TGG | - | chr7_1:18140166-18140185 | None:intergenic | 25.0% |
| ! | AACAGAACAACAAATAAGTA+TGG | + | chr7_1:18140301-18140320 | Msa1012700:CDS | 25.0% |
| ! | ATTAGATTCATGTAGTTGAT+TGG | + | chr7_1:18140873-18140892 | Msa1012700:three_prime_UTR | 25.0% |
| ! | TTAGATTCATGTAGTTGATT+GGG | + | chr7_1:18140874-18140893 | Msa1012700:three_prime_UTR | 25.0% |
| ! | AAAGACATGTGAATGTTATT+TGG | - | chr7_1:18139211-18139230 | None:intergenic | 25.0% |
| !! | TCAAACTTTTTGCTTGAAAT+CGG | + | chr7_1:18139269-18139288 | Msa1012700:five_prime_UTR | 25.0% |
| ! | GGTTATTCAAAATTATTACC+TGG | - | chr7_1:18139575-18139594 | None:intergenic | 25.0% |
| ! | ACACTCTATTTGAACTATTT+CGG | - | chr7_1:18139636-18139655 | None:intergenic | 25.0% |
| !!! | CTCGTCCAATATTTTTTTAA+AGG | - | chr7_1:18139671-18139690 | None:intergenic | 25.0% |
| ! | CTATAAATTAAAAGGATAGG+AGG | + | chr7_1:18139697-18139716 | Msa1012700:intron | 25.0% |
| ! | TTATATGTGCAAAGATGTTT+CGG | + | chr7_1:18139855-18139874 | Msa1012700:intron | 25.0% |
| !!! | TTTTTCTGAAGACAAAATTG+GGG | + | chr7_1:18140069-18140088 | Msa1012700:intron | 25.0% |
| !! | TAGTTTAACTTTCGTAGAAA+TGG | - | chr7_1:18140140-18140159 | None:intergenic | 25.0% |
| !! | ACTAATTTTTGTTAACTCAG+TGG | - | chr7_1:18140166-18140185 | None:intergenic | 25.0% |
| ! | AACAGAACAACAAATAAGTA+TGG | + | chr7_1:18140301-18140320 | Msa1012700:CDS | 25.0% |
| ! | ATTAGATTCATGTAGTTGAT+TGG | + | chr7_1:18140873-18140892 | Msa1012700:three_prime_UTR | 25.0% |
| ! | TTAGATTCATGTAGTTGATT+GGG | + | chr7_1:18140874-18140893 | Msa1012700:three_prime_UTR | 25.0% |
| !! | ATTCTTTTGATTGGATAGAG+AGG | - | chr7_1:18139146-18139165 | None:intergenic | 30.0% |
| TGTGTGGATAAAAGAAAGAA+GGG | - | chr7_1:18139312-18139331 | None:intergenic | 30.0% | |
| ATACTAGTTGAAGATGAGTT+TGG | - | chr7_1:18139335-18139354 | None:intergenic | 30.0% | |
| AAAATAAGCAAGAGAGTTAG+AGG | - | chr7_1:18139401-18139420 | None:intergenic | 30.0% | |
| ! | ACCTTTCTTTACTCAGTTTT+TGG | + | chr7_1:18139421-18139440 | Msa1012700:CDS | 30.0% |
| TCCAAAAACTGAGTAAAGAA+AGG | - | chr7_1:18139425-18139444 | None:intergenic | 30.0% | |
| ATTTGAGAGTTAGGAAATCT+TGG | - | chr7_1:18139482-18139501 | None:intergenic | 30.0% | |
| ATGCAAACAATTAACACTAG+AGG | - | chr7_1:18139596-18139615 | None:intergenic | 30.0% | |
| AAAAAGAGATTAATGGTGGT+AGG | + | chr7_1:18139726-18139745 | Msa1012700:intron | 30.0% | |
| ! | TTGTGTATGTAAAGCTGTTT+TGG | - | chr7_1:18139760-18139779 | None:intergenic | 30.0% |
| !!! | GCAATTCTAAGTGTTTTGAT+TGG | + | chr7_1:18139832-18139851 | Msa1012700:intron | 30.0% |
| CAAATAAGTATGGAATGTAC+AGG | + | chr7_1:18140311-18140330 | Msa1012700:CDS | 30.0% | |
| TCTTGCCAAGCAAATTTAAT+AGG | + | chr7_1:18140391-18140410 | Msa1012700:CDS | 30.0% | |
| CTTGCCAAGCAAATTTAATA+GGG | + | chr7_1:18140392-18140411 | Msa1012700:CDS | 30.0% | |
| ! | AACTCCCTATTAAATTTGCT+TGG | - | chr7_1:18140399-18140418 | None:intergenic | 30.0% |
| TTTGACTGAAATCACATTAG+CGG | - | chr7_1:18140458-18140477 | None:intergenic | 30.0% | |
| ! | AAATTTTAGACCGTCTAAGA+AGG | + | chr7_1:18140519-18140538 | Msa1012700:CDS | 30.0% |
| !! | TACATAATTAGCCTTGTTCT+TGG | + | chr7_1:18140585-18140604 | Msa1012700:three_prime_UTR | 30.0% |
| !!! | ATTTTTTTTGGAGCCTATTG+AGG | + | chr7_1:18140619-18140638 | Msa1012700:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTGGAGCCTATTGA+GGG | + | chr7_1:18140620-18140639 | Msa1012700:three_prime_UTR | 30.0% |
| !! | ATTCTTTTGATTGGATAGAG+AGG | - | chr7_1:18139146-18139165 | None:intergenic | 30.0% |
| TGTGTGGATAAAAGAAAGAA+GGG | - | chr7_1:18139312-18139331 | None:intergenic | 30.0% | |
| ATACTAGTTGAAGATGAGTT+TGG | - | chr7_1:18139335-18139354 | None:intergenic | 30.0% | |
| AAAATAAGCAAGAGAGTTAG+AGG | - | chr7_1:18139401-18139420 | None:intergenic | 30.0% | |
| ! | ACCTTTCTTTACTCAGTTTT+TGG | + | chr7_1:18139421-18139440 | Msa1012700:CDS | 30.0% |
| TCCAAAAACTGAGTAAAGAA+AGG | - | chr7_1:18139425-18139444 | None:intergenic | 30.0% | |
| ATTTGAGAGTTAGGAAATCT+TGG | - | chr7_1:18139482-18139501 | None:intergenic | 30.0% | |
| ATGCAAACAATTAACACTAG+AGG | - | chr7_1:18139596-18139615 | None:intergenic | 30.0% | |
| AAAAAGAGATTAATGGTGGT+AGG | + | chr7_1:18139726-18139745 | Msa1012700:intron | 30.0% | |
| ! | TTGTGTATGTAAAGCTGTTT+TGG | - | chr7_1:18139760-18139779 | None:intergenic | 30.0% |
| !!! | GCAATTCTAAGTGTTTTGAT+TGG | + | chr7_1:18139832-18139851 | Msa1012700:intron | 30.0% |
| CAAATAAGTATGGAATGTAC+AGG | + | chr7_1:18140311-18140330 | Msa1012700:CDS | 30.0% | |
| TCTTGCCAAGCAAATTTAAT+AGG | + | chr7_1:18140391-18140410 | Msa1012700:CDS | 30.0% | |
| CTTGCCAAGCAAATTTAATA+GGG | + | chr7_1:18140392-18140411 | Msa1012700:CDS | 30.0% | |
| ! | AACTCCCTATTAAATTTGCT+TGG | - | chr7_1:18140399-18140418 | None:intergenic | 30.0% |
| TTTGACTGAAATCACATTAG+CGG | - | chr7_1:18140458-18140477 | None:intergenic | 30.0% | |
| ! | AAATTTTAGACCGTCTAAGA+AGG | + | chr7_1:18140519-18140538 | Msa1012700:CDS | 30.0% |
| !! | TACATAATTAGCCTTGTTCT+TGG | + | chr7_1:18140585-18140604 | Msa1012700:three_prime_UTR | 30.0% |
| !!! | ATTTTTTTTGGAGCCTATTG+AGG | + | chr7_1:18140619-18140638 | Msa1012700:three_prime_UTR | 30.0% |
| !!! | TTTTTTTTGGAGCCTATTGA+GGG | + | chr7_1:18140620-18140639 | Msa1012700:three_prime_UTR | 30.0% |
| ! | GGGTAAGAGATTCTTTTGAT+TGG | - | chr7_1:18139155-18139174 | None:intergenic | 35.0% |
| ! | GAATGTTATTTGGCAAGACA+TGG | - | chr7_1:18139201-18139220 | None:intergenic | 35.0% |
| GTGTGTGGATAAAAGAAAGA+AGG | - | chr7_1:18139313-18139332 | None:intergenic | 35.0% | |
| !! | ATCACACTGATTTGAGAGTT+AGG | - | chr7_1:18139491-18139510 | None:intergenic | 35.0% |
| TAACTCTCAAATCAGTGTGA+TGG | + | chr7_1:18139490-18139509 | Msa1012700:CDS | 35.0% | |
| AACTCTCAAATCAGTGTGAT+GGG | + | chr7_1:18139491-18139510 | Msa1012700:CDS | 35.0% | |
| !! | GTATGTAAAGCTGTTTTGGA+CGG | - | chr7_1:18139756-18139775 | None:intergenic | 35.0% |
| ! | ATAATTATGTTCAGGTGCTG+AGG | + | chr7_1:18140213-18140232 | Msa1012700:intron | 35.0% |
| ! | ATTGAAGTACCATCAGTTGA+TGG | + | chr7_1:18140334-18140353 | Msa1012700:CDS | 35.0% |
| ATGTGATTTCAGTCAAAGCA+AGG | + | chr7_1:18140461-18140480 | Msa1012700:CDS | 35.0% | |
| ATTACTAGTTGCCAAGAACA+AGG | - | chr7_1:18140599-18140618 | None:intergenic | 35.0% | |
| ! | GGGTAAGAGATTCTTTTGAT+TGG | - | chr7_1:18139155-18139174 | None:intergenic | 35.0% |
| ! | GAATGTTATTTGGCAAGACA+TGG | - | chr7_1:18139201-18139220 | None:intergenic | 35.0% |
| GTGTGTGGATAAAAGAAAGA+AGG | - | chr7_1:18139313-18139332 | None:intergenic | 35.0% | |
| !! | ATCACACTGATTTGAGAGTT+AGG | - | chr7_1:18139491-18139510 | None:intergenic | 35.0% |
| TAACTCTCAAATCAGTGTGA+TGG | + | chr7_1:18139490-18139509 | Msa1012700:CDS | 35.0% | |
| AACTCTCAAATCAGTGTGAT+GGG | + | chr7_1:18139491-18139510 | Msa1012700:CDS | 35.0% | |
| !! | GTATGTAAAGCTGTTTTGGA+CGG | - | chr7_1:18139756-18139775 | None:intergenic | 35.0% |
| ! | ATAATTATGTTCAGGTGCTG+AGG | + | chr7_1:18140213-18140232 | Msa1012700:intron | 35.0% |
| ! | ATTGAAGTACCATCAGTTGA+TGG | + | chr7_1:18140334-18140353 | Msa1012700:CDS | 35.0% |
| ATGTGATTTCAGTCAAAGCA+AGG | + | chr7_1:18140461-18140480 | Msa1012700:CDS | 35.0% | |
| ATTACTAGTTGCCAAGAACA+AGG | - | chr7_1:18140599-18140618 | None:intergenic | 35.0% | |
| GATAGAGAGGAGAGGTAAAT+AGG | - | chr7_1:18139133-18139152 | None:intergenic | 40.0% | |
| TTTGATTGGATAGAGAGGAG+AGG | - | chr7_1:18139141-18139160 | None:intergenic | 40.0% | |
| TTATGAGTAGGAGAGAGAAG+GGG | - | chr7_1:18139175-18139194 | None:intergenic | 40.0% | |
| GTTATGAGTAGGAGAGAGAA+GGG | - | chr7_1:18139176-18139195 | None:intergenic | 40.0% | |
| AAGACATGGAGGTTATGAGT+AGG | - | chr7_1:18139187-18139206 | None:intergenic | 40.0% | |
| ! | TGTTATTTGGCAAGACATGG+AGG | - | chr7_1:18139198-18139217 | None:intergenic | 40.0% |
| GAAAGAAGGGTAGTTGTTAG+TGG | - | chr7_1:18139299-18139318 | None:intergenic | 40.0% | |
| !! | TTGAAGATGAGTTTGGTGTG+TGG | - | chr7_1:18139328-18139347 | None:intergenic | 40.0% |
| CAAGAGAGTTAGAGGATTCA+TGG | - | chr7_1:18139393-18139412 | None:intergenic | 40.0% | |
| ATGACATCTATGCCCTCAAT+AGG | - | chr7_1:18140635-18140654 | None:intergenic | 40.0% | |
| TAACTAAGACGTAGCTCAAG+TGG | - | chr7_1:18140852-18140871 | None:intergenic | 40.0% | |
| TCATGTAGTTGATTGGGTAC+TGG | + | chr7_1:18140880-18140899 | Msa1012700:three_prime_UTR | 40.0% | |
| GATAGAGAGGAGAGGTAAAT+AGG | - | chr7_1:18139133-18139152 | None:intergenic | 40.0% | |
| TTTGATTGGATAGAGAGGAG+AGG | - | chr7_1:18139141-18139160 | None:intergenic | 40.0% | |
| TTATGAGTAGGAGAGAGAAG+GGG | - | chr7_1:18139175-18139194 | None:intergenic | 40.0% | |
| GTTATGAGTAGGAGAGAGAA+GGG | - | chr7_1:18139176-18139195 | None:intergenic | 40.0% | |
| AAGACATGGAGGTTATGAGT+AGG | - | chr7_1:18139187-18139206 | None:intergenic | 40.0% | |
| ! | TGTTATTTGGCAAGACATGG+AGG | - | chr7_1:18139198-18139217 | None:intergenic | 40.0% |
| GAAAGAAGGGTAGTTGTTAG+TGG | - | chr7_1:18139299-18139318 | None:intergenic | 40.0% | |
| !! | TTGAAGATGAGTTTGGTGTG+TGG | - | chr7_1:18139328-18139347 | None:intergenic | 40.0% |
| CAAGAGAGTTAGAGGATTCA+TGG | - | chr7_1:18139393-18139412 | None:intergenic | 40.0% | |
| ATGACATCTATGCCCTCAAT+AGG | - | chr7_1:18140635-18140654 | None:intergenic | 40.0% | |
| TAACTAAGACGTAGCTCAAG+TGG | - | chr7_1:18140852-18140871 | None:intergenic | 40.0% | |
| TCATGTAGTTGATTGGGTAC+TGG | + | chr7_1:18140880-18140899 | Msa1012700:three_prime_UTR | 40.0% | |
| GGTTATGAGTAGGAGAGAGA+AGG | - | chr7_1:18139177-18139196 | None:intergenic | 45.0% | |
| !! | CTGCAAGACCAAAAGTGCTA+GGG | + | chr7_1:18139453-18139472 | Msa1012700:CDS | 45.0% |
| ! | CTTGGTTTCCCTAGCACTTT+TGG | - | chr7_1:18139464-18139483 | None:intergenic | 45.0% |
| AGACATAGCTACTTCTTGCC+AGG | + | chr7_1:18139554-18139573 | Msa1012700:CDS | 45.0% | |
| CATCTCACTCCATCAACTGA+TGG | - | chr7_1:18140346-18140365 | None:intergenic | 45.0% | |
| ! | TTAGCGGTGCTTTTGTATCC+AGG | - | chr7_1:18140442-18140461 | None:intergenic | 45.0% |
| AGACCAGTGTCCTTCTTAGA+CGG | - | chr7_1:18140532-18140551 | None:intergenic | 45.0% | |
| ! | AAGAAGGACACTGGTCTATG+TGG | + | chr7_1:18140535-18140554 | Msa1012700:CDS | 45.0% |
| GGTTATGAGTAGGAGAGAGA+AGG | - | chr7_1:18139177-18139196 | None:intergenic | 45.0% | |
| !! | CTGCAAGACCAAAAGTGCTA+GGG | + | chr7_1:18139453-18139472 | Msa1012700:CDS | 45.0% |
| ! | CTTGGTTTCCCTAGCACTTT+TGG | - | chr7_1:18139464-18139483 | None:intergenic | 45.0% |
| AGACATAGCTACTTCTTGCC+AGG | + | chr7_1:18139554-18139573 | Msa1012700:CDS | 45.0% | |
| CATCTCACTCCATCAACTGA+TGG | - | chr7_1:18140346-18140365 | None:intergenic | 45.0% | |
| ! | TTAGCGGTGCTTTTGTATCC+AGG | - | chr7_1:18140442-18140461 | None:intergenic | 45.0% |
| AGACCAGTGTCCTTCTTAGA+CGG | - | chr7_1:18140532-18140551 | None:intergenic | 45.0% | |
| ! | AAGAAGGACACTGGTCTATG+TGG | + | chr7_1:18140535-18140554 | Msa1012700:CDS | 45.0% |
| !!! | TATATTTTTTAAAATATATG+AGG | - | chr7_1:18139910-18139929 | None:intergenic | 5.0% |
| !!! | TATATTTTTTAAAATATATG+AGG | - | chr7_1:18139910-18139929 | None:intergenic | 5.0% |
| !!! | CCTAGCACTTTTGGTCTTGC+AGG | - | chr7_1:18139455-18139474 | None:intergenic | 50.0% |
| !! | CCTGCAAGACCAAAAGTGCT+AGG | + | chr7_1:18139452-18139471 | Msa1012700:CDS | 50.0% |
| GATGGAGTGAGATGTGCTGA+AGG | + | chr7_1:18140352-18140371 | Msa1012700:CDS | 50.0% | |
| ACCACTGCTTGCAATGTTCC+TGG | + | chr7_1:18140421-18140440 | Msa1012700:CDS | 50.0% | |
| TCCAGGAACATTGCAAGCAG+TGG | - | chr7_1:18140425-18140444 | None:intergenic | 50.0% | |
| AGACCGTCTAAGAAGGACAC+TGG | + | chr7_1:18140526-18140545 | Msa1012700:CDS | 50.0% | |
| GTAGCTCAAGTGGTTGAGCT+AGG | - | chr7_1:18140842-18140861 | None:intergenic | 50.0% | |
| !!! | CCTAGCACTTTTGGTCTTGC+AGG | - | chr7_1:18139455-18139474 | None:intergenic | 50.0% |
| !! | CCTGCAAGACCAAAAGTGCT+AGG | + | chr7_1:18139452-18139471 | Msa1012700:CDS | 50.0% |
| GATGGAGTGAGATGTGCTGA+AGG | + | chr7_1:18140352-18140371 | Msa1012700:CDS | 50.0% | |
| ACCACTGCTTGCAATGTTCC+TGG | + | chr7_1:18140421-18140440 | Msa1012700:CDS | 50.0% | |
| TCCAGGAACATTGCAAGCAG+TGG | - | chr7_1:18140425-18140444 | None:intergenic | 50.0% | |
| AGACCGTCTAAGAAGGACAC+TGG | + | chr7_1:18140526-18140545 | Msa1012700:CDS | 50.0% | |
| GTAGCTCAAGTGGTTGAGCT+AGG | - | chr7_1:18140842-18140861 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 18139106 | 18141039 | 18139106 | ID=Msa1012700;Name=Msa1012700 |
| chr7_1 | mRNA | 18139106 | 18141039 | 18139106 | ID=Msa1012700-mRNA-1;Parent=Msa1012700;Name=Msa1012700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=286|1|1|1|1|1|2|475|173 |
| chr7_1 | exon | 18139106 | 18139575 | 18139106 | ID=Msa1012700-mRNA-1:exon:4528;Parent=Msa1012700-mRNA-1 |
| chr7_1 | exon | 18140227 | 18141039 | 18140227 | ID=Msa1012700-mRNA-1:exon:4529;Parent=Msa1012700-mRNA-1 |
| chr7_1 | five_prime_UTR | 18139106 | 18139391 | 18139106 | ID=Msa1012700-mRNA-1:five_prime_utr;Parent=Msa1012700-mRNA-1 |
| chr7_1 | CDS | 18139392 | 18139575 | 18139392 | ID=Msa1012700-mRNA-1:cds;Parent=Msa1012700-mRNA-1 |
| chr7_1 | CDS | 18140227 | 18140564 | 18140227 | ID=Msa1012700-mRNA-1:cds;Parent=Msa1012700-mRNA-1 |
| chr7_1 | three_prime_UTR | 18140565 | 18141039 | 18140565 | ID=Msa1012700-mRNA-1:three_prime_utr;Parent=Msa1012700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
