AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406040 MtrunA17_Chr4g0031981 98.261 805 11 2 1 803 1 804 0.0 1630
Msa1406040 MtrunA17_Chr2g0328601 78.406 690 149 0 114 803 102 791 0.0 1173
Msa1406040 MtrunA17_Chr5g0400161 81.690 71 13 0 668 738 2 72 1.94e-36 131
Msa1406040 MtrunA17_Chr2g0328911 24.027 591 388 22 207 787 194 733 3.69e-24 108
Msa1406040 MtrunA17_Chr1g0184291 32.487 197 110 7 598 787 165 345 3.04e-14 75.1
Msa1406040 MtrunA17_Chr2g0322151 26.820 261 151 7 549 787 102 344 4.96e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406040 AT3G46740.1 81.304 690 129 0 114 803 129 818 0.0 1205
Msa1406040 AT4G09080.2 62.169 415 136 7 391 803 12 407 1.08e-173 506
Msa1406040 AT4G09080.1 61.928 415 137 7 391 803 1 396 1.29e-173 505
Msa1406040 AT4G09080.3 70.154 325 94 3 481 803 2 325 4.93e-162 473
Msa1406040 AT1G35860.1 49.421 518 138 8 265 778 2 399 1.30e-155 459
Msa1406040 AT5G19620.1 24.007 579 371 21 235 800 205 727 6.30e-26 114
Msa1406040 AT3G44160.1 33.480 227 119 9 549 759 102 312 1.33e-16 82.8

Find 296 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACACTGGGGTTTGGGTTT+GGG 0.165322 tig0023178:-52478 None:intergenic
TATTACCTCGAGGATGTTTC+TGG 0.196346 tig0023178:-56330 None:intergenic
TGAGGTTTATAAAGAGATTA+AGG 0.210672 tig0023178:+53449 Msa1406040:CDS
GAATCCCAATCTTGTGATTT+TGG 0.214936 tig0023178:-52964 None:intergenic
ACTACACTGGGGTTTGGGTT+TGG 0.215175 tig0023178:-52479 None:intergenic
CGTCAGAGTAAATTCACTTA+TGG 0.227562 tig0023178:+54670 Msa1406040:CDS
TGTGCTCAGGTTGTTAATTT+TGG 0.233516 tig0023178:+53564 Msa1406040:CDS
TACTTCTAGGCCTTGTCTTT+TGG 0.238382 tig0023178:+53422 Msa1406040:CDS
CTATAGGTTACTCTCAAAAT+TGG 0.240843 tig0023178:+56829 Msa1406040:three_prime_UTR
GCGGTGAAGGAGGTGATTTC+TGG 0.263332 tig0023178:+52902 Msa1406040:CDS
TAAAATTACCTCAGTGATAT+TGG 0.265879 tig0023178:-54548 None:intergenic
ATGTGATTACTGTACTATTT+TGG 0.270066 tig0023178:+52400 Msa1406040:five_prime_UTR
TTCCATCCGTTCTCATGAAT+TGG 0.276870 tig0023178:-56933 None:intergenic
TATGAGTGAAAAGGAGAAAA+TGG 0.277825 tig0023178:+53356 Msa1406040:CDS
GGATGATCTTGCATTTAAAA+TGG 0.280908 tig0023178:+54369 Msa1406040:intron
GGTGGTGGCACAAGTATATT+TGG 0.281253 tig0023178:+57144 Msa1406040:three_prime_UTR
AGTGAACTCCCTGCTGCTAC+TGG 0.285405 tig0023178:+56796 Msa1406040:three_prime_UTR
ATTTGTTGCAGTAAGTAATT+TGG 0.289403 tig0023178:+52423 Msa1406040:five_prime_UTR
TGTTTGAATCTTGTAGAAAT+TGG 0.290682 tig0023178:+56769 Msa1406040:three_prime_UTR
GGAGTATGCACATCCGTATT+TGG 0.292124 tig0023178:+54390 Msa1406040:CDS
ACAAACATACACACCTGTTT+TGG 0.295537 tig0023178:-53720 None:intergenic
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 tig0023178:+53502 Msa1406040:CDS
ACCACACTACACTGGGGTTT+GGG 0.327846 tig0023178:-52484 None:intergenic
GAAACTGAGTCAAAGTTAAT+TGG 0.330853 tig0023178:-56142 None:intergenic
ATGGGTCAGGGGTCCTCTTA+TGG 0.335391 tig0023178:+56583 Msa1406040:CDS
CCAGTATTCACTGGTGGGCC+GGG 0.337871 tig0023178:+54478 Msa1406040:CDS
CTCAAAATCTTTCTCCAAAT+CGG 0.339518 tig0023178:-56681 None:intergenic
TTCTCCGGAGGTGGCGGCGG+AGG 0.339863 tig0023178:+52829 Msa1406040:CDS
CACCACACTACACTGGGGTT+TGG 0.342771 tig0023178:-52485 None:intergenic
TCCGGAGGTGGCGGCGGAGG+TGG 0.343459 tig0023178:+52832 Msa1406040:CDS
CGAAACACCAAGACGAAAAT+CGG 0.346482 tig0023178:+53075 Msa1406040:CDS
TCGTCGGCGAACGCGGTTGC+TGG 0.348068 tig0023178:-52940 None:intergenic
TCCAGTATTCACTGGTGGGC+CGG 0.351628 tig0023178:+54477 Msa1406040:CDS
CCCGGCCCACCAGTGAATAC+TGG 0.359227 tig0023178:-54478 None:intergenic
GCAGAACATGGCACCGATCT+AGG 0.359815 tig0023178:+56514 Msa1406040:CDS
TACACGTGTGTACCTTTAAT+AGG 0.361255 tig0023178:-56484 None:intergenic
CCCTTTGTGATGAGGATTGT+AGG 0.374978 tig0023178:+56991 Msa1406040:three_prime_UTR
TTGACAAAACAGCTTCTTCC+GGG 0.376101 tig0023178:+53813 Msa1406040:intron
GGAAGTTCTCTTTGAACAAC+AGG 0.378093 tig0023178:-53699 None:intergenic
GAAGAGAGCAGAGGCGGCGG+AGG 0.384279 tig0023178:-52779 None:intergenic
TGGAAGCAGGAACATGTTCC+AGG 0.393764 tig0023178:+54888 Msa1406040:CDS
GGATTGAATAGATCTCTTAC+TGG 0.396182 tig0023178:+54192 Msa1406040:CDS
GGAGGTGGCGGCGGAGGTGG+AGG 0.397183 tig0023178:+52835 Msa1406040:CDS
ACTGAGTGGAGTATTGTTCC+TGG 0.398835 tig0023178:+54002 Msa1406040:CDS
GAGATATGTGGTGGTTGTTA+CGG 0.400407 tig0023178:-52654 None:intergenic
TTTGACAAAACAGCTTCTTC+CGG 0.401319 tig0023178:+53812 Msa1406040:intron
CCAGTACCACTGAGGGTTGT+TGG 0.404945 tig0023178:-54793 None:intergenic
TTCAATTTCTCCGGAGGTGG+CGG 0.406615 tig0023178:+52823 Msa1406040:CDS
GACAAGAGAGGGAGTATAAG+AGG 0.407066 tig0023178:+53391 Msa1406040:CDS
TTGAATCCGCTAAGTTTGTT+TGG 0.407816 tig0023178:-53018 None:intergenic
TCTTCCTCCGGTGGTGGAGG+TGG 0.410189 tig0023178:+52859 Msa1406040:CDS
TGGATGAAGTGCCCTCCATA+TGG 0.410464 tig0023178:+54503 Msa1406040:CDS
CTCCCTGCTGCTACTGGGGT+TGG 0.411585 tig0023178:+56802 Msa1406040:three_prime_UTR
GTTGTAACCCCTTACAGAAT+AGG 0.411697 tig0023178:-56288 None:intergenic
AGCGTTGACGATTTCGTTCG+CGG 0.412504 tig0023178:+53248 Msa1406040:CDS
TCCACCTCCGCCGCCACCTC+CGG 0.412567 tig0023178:-52833 None:intergenic
GTGAACTCCCTGCTGCTACT+GGG 0.413398 tig0023178:+56797 Msa1406040:three_prime_UTR
CTTCCCTCATTCTTCTCATC+AGG 0.414103 tig0023178:-53924 None:intergenic
CAGTATTCACTGGTGGGCCG+GGG 0.414933 tig0023178:+54479 Msa1406040:CDS
TTGTAACCCCTTACAGAATA+GGG 0.418439 tig0023178:-56287 None:intergenic
AGAGGAGGATTGATACTTCT+AGG 0.418613 tig0023178:+53409 Msa1406040:CDS
TCAAAGAGAACTTCCAAAAC+AGG 0.419638 tig0023178:+53707 Msa1406040:CDS
AATTGGTGACGGTTAAAGAA+TGG 0.420841 tig0023178:-56125 None:intergenic
TCAGTCGAAACCGGTTGAAA+TGG 0.421087 tig0023178:+53326 Msa1406040:CDS
AATGTTTGAGAAGGTTGATA+TGG 0.422128 tig0023178:+53197 Msa1406040:CDS
CTTCCTCCACAGACTTCAAC+TGG 0.424159 tig0023178:-56166 None:intergenic
ACGAACCAAAATCACAAGAT+TGG 0.424406 tig0023178:+52959 Msa1406040:CDS
GAGGTACGTATACCTATTAA+AGG 0.424670 tig0023178:+56472 Msa1406040:CDS
GGTTACAACATGGGTGAGAT+TGG 0.425561 tig0023178:+56302 Msa1406040:CDS
TGAATACTGGACTCAGCTTT+CGG 0.425621 tig0023178:-54465 None:intergenic
CTTGTCCTCCATGGTCACTA+TGG 0.425624 tig0023178:+56215 Msa1406040:CDS
ATGTATCAATGTAGGGTTGA+TGG 0.426742 tig0023178:+53302 Msa1406040:CDS
ACCATTGGAACAGATATGAT+TGG 0.428498 tig0023178:-54728 None:intergenic
CAGGGGTCCTCTTATGGTGC+TGG 0.428552 tig0023178:+56589 Msa1406040:CDS
AGGAGGAGGAGGGGTTGAAA+TGG 0.429029 tig0023178:-52626 None:intergenic
GAGGAAGAGAGCAGAGGCGG+CGG 0.429532 tig0023178:-52782 None:intergenic
TTACGGCGGTGAGGAGGAGG+AGG 0.430121 tig0023178:-52637 None:intergenic
ACCTCCGGAGAAATTGAAAT+CGG 0.434355 tig0023178:-52818 None:intergenic
CTCCCCGATTTCAATTTCTC+CGG 0.435702 tig0023178:+52814 Msa1406040:CDS
CGCTAATGTTCCATCAGCAT+TGG 0.435932 tig0023178:-53229 None:intergenic
ATTGGTGACGGTTAAAGAAT+GGG 0.436136 tig0023178:-56124 None:intergenic
GTAATCACATGCAGTAATTA+CGG 0.438706 tig0023178:-52387 None:intergenic
GAAATCCGACAGAAGTCTAT+AGG 0.441636 tig0023178:+56557 Msa1406040:CDS
CTTCATACCAGCACCATAAG+AGG 0.442191 tig0023178:-56596 None:intergenic
GAGGTTTATAAAGAGATTAA+GGG 0.444103 tig0023178:+53450 Msa1406040:CDS
AGTCTATAGGAGAATGGGTC+AGG 0.444715 tig0023178:+56570 Msa1406040:CDS
GGTAGAACGGTTATGTTAGC+TGG 0.445300 tig0023178:-52997 None:intergenic
AGGTTTAGATGTATCAATGT+AGG 0.447359 tig0023178:+53294 Msa1406040:CDS
CTGCAGGCTTCGCTTCAGCC+AGG 0.449356 tig0023178:+54135 Msa1406040:intron
ACCAGCACGGTCAACCCATA+TGG 0.451429 tig0023178:-54518 None:intergenic
TTAATCTCTTTATAAACCTC+AGG 0.452420 tig0023178:-53447 None:intergenic
CATGAGTCGTAGTGTATGTT+TGG 0.453624 tig0023178:+56709 Msa1406040:three_prime_UTR
TCCTCCGGTGGTGGAGGTGG+TGG 0.454969 tig0023178:+52862 Msa1406040:CDS
AGCAGCTTACACGGAGAGTT+CGG 0.456701 tig0023178:-54435 None:intergenic
GATTTCAATTTCTCCGGAGG+TGG 0.457365 tig0023178:+52820 Msa1406040:CDS
GTATGTGGGAGAAAGCTGAT+AGG 0.458850 tig0023178:+53274 Msa1406040:CDS
TAAAGAGTTGGAGCAGAAAT+CGG 0.460513 tig0023178:+53968 Msa1406040:CDS
AAGCTTGGTAATGTTGTTGA+AGG 0.461119 tig0023178:+53663 Msa1406040:CDS
TGAGATTAAGCTTAAAGAGT+TGG 0.462130 tig0023178:+53956 Msa1406040:CDS
TTTCGTTCGCGGAGAGTATG+TGG 0.462541 tig0023178:+53259 Msa1406040:CDS
CCAACAACCCTCAGTGGTAC+TGG 0.463318 tig0023178:+54793 Msa1406040:CDS
TATGGTGCTGGTATGAAGCT+TGG 0.464083 tig0023178:+56601 Msa1406040:CDS
ATATCAGGATCCATTTCAAC+CGG 0.464958 tig0023178:-53336 None:intergenic
AAGGGGATGTTGAGTAAGCA+AGG 0.465253 tig0023178:+53468 Msa1406040:CDS
AAACCAACCCCAGTAGCAGC+AGG 0.467106 tig0023178:-56805 None:intergenic
CCGGTGGTGGAGGTGGTGGT+TGG 0.467128 tig0023178:+52866 Msa1406040:CDS
GGATCTTCCTCCGGTGGTGG+AGG 0.469677 tig0023178:+52856 Msa1406040:CDS
TCTGCACTAATTCCTCCATT+AGG 0.471078 tig0023178:-54763 None:intergenic
AATTTCTCCGGAGGTGGCGG+CGG 0.471602 tig0023178:+52826 Msa1406040:CDS
AGAGGAAAGTTGACATTTGA+CGG 0.473771 tig0023178:-52686 None:intergenic
GGTCAAAGAGTATTGCCTAA+TGG 0.474904 tig0023178:+54748 Msa1406040:CDS
AGGCAATACTCTTTGACCAT+TGG 0.475159 tig0023178:-54743 None:intergenic
AGGAGGAGGGGTTGAAATGG+TGG 0.475264 tig0023178:-52623 None:intergenic
CGAACCAAAATCACAAGATT+GGG 0.476541 tig0023178:+52960 Msa1406040:CDS
GTTGATCATAACTCAGGAAC+AGG 0.476580 tig0023178:+56646 Msa1406040:CDS
TGTTGCAGAAGATTAGGGAT+AGG 0.477600 tig0023178:+53508 Msa1406040:CDS
ATCATTGTTGTTATTATCGT+CGG 0.478838 tig0023178:-52710 None:intergenic
GATGCTGTCTTGTATTCAAA+AGG 0.479634 tig0023178:-52359 None:intergenic
CAGAAATGGTATCATGATGA+AGG 0.480291 tig0023178:+53534 Msa1406040:CDS
TTTGTGAACGGAGCTATAGT+TGG 0.480304 tig0023178:+54868 Msa1406040:CDS
GGAGGATCTTCCTCCGGTGG+TGG 0.481721 tig0023178:+52853 Msa1406040:CDS
GGATGTTGAGTAAGCAAGGG+AGG 0.483099 tig0023178:+53472 Msa1406040:CDS
TGAAATGGTGGTTAAGCGAT+TGG 0.483381 tig0023178:-52611 None:intergenic
CTACAAGATTCAAACACCTA+TGG 0.484282 tig0023178:-56762 None:intergenic
TTGTTACGGCGGTGAGGAGG+AGG 0.484441 tig0023178:-52640 None:intergenic
CCGCGGATTCACTTCAATGT+TGG 0.485045 tig0023178:-53901 None:intergenic
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 tig0023178:+53503 Msa1406040:CDS
ATTCACTTATGGATTAGTAA+TGG 0.488117 tig0023178:+54681 Msa1406040:CDS
GACAGAAGTCTATAGGAGAA+TGG 0.488499 tig0023178:+56564 Msa1406040:CDS
GTTACTCTCAAAATTGGTGT+AGG 0.488813 tig0023178:+56835 Msa1406040:three_prime_UTR
TGGAGTATTGTTCCTGGGCG+AGG 0.491841 tig0023178:+54008 Msa1406040:CDS
CCTCCGGAGAAATTGAAATC+GGG 0.491984 tig0023178:-52817 None:intergenic
TTCGCCGCAAATACCAAAGT+TGG 0.492832 tig0023178:-54038 None:intergenic
GTATTGTTCCTGGGCGAGGA+GGG 0.493554 tig0023178:+54012 Msa1406040:CDS
GCTAAGTTTGTTTGGTAGAA+CGG 0.495514 tig0023178:-53010 None:intergenic
GCGAGGAGGGCGTCCAACTT+TGG 0.496872 tig0023178:+54025 Msa1406040:CDS
GTTTCTCCAGTTGAAGTCTG+TGG 0.496953 tig0023178:+56160 Msa1406040:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.498736 tig0023178:+53606 Msa1406040:CDS
GGATCCTGATATGAGTGAAA+AGG 0.500579 tig0023178:+53347 Msa1406040:CDS
AAACCACACCACACTACACT+GGG 0.501347 tig0023178:-52491 None:intergenic
GTTGCAGAAGATTAGGGATA+GGG 0.502834 tig0023178:+53509 Msa1406040:CDS
ACAGAAGTCTATAGGAGAAT+GGG 0.503850 tig0023178:+56565 Msa1406040:CDS
TAAGCGATTGGAGGCGAAGA+AGG 0.507131 tig0023178:-52599 None:intergenic
GTTGTTATTATCGTCGGAAG+AGG 0.507516 tig0023178:-52704 None:intergenic
CTTCCTACAGCTGGCAGCTG+AGG 0.508063 tig0023178:+56453 Msa1406040:intron
AAGCTGGGAAACAAGCTTTG+AGG 0.509682 tig0023178:+53853 Msa1406040:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.513783 tig0023178:+56292 Msa1406040:CDS
TCATTCTTCTCATCAGGCCG+CGG 0.514700 tig0023178:-53918 None:intergenic
TTACTCTCAAAATTGGTGTA+GGG 0.517563 tig0023178:+56836 Msa1406040:three_prime_UTR
AGTTGACATTTGACGGAGGA+AGG 0.517719 tig0023178:-52679 None:intergenic
TCATTTACACCATCCAAATA+CGG 0.518980 tig0023178:-54403 None:intergenic
GGACTATTACATTTGAACAT+AGG 0.519926 tig0023178:+54160 Msa1406040:CDS
TTTGAGAAGGTTGATATGGA+AGG 0.520196 tig0023178:+53201 Msa1406040:CDS
GTCCAATTCATGAGAACGGA+TGG 0.520989 tig0023178:+56931 Msa1406040:three_prime_UTR
TCAAAACTGCAGGTAGATCA+AGG 0.521033 tig0023178:+56080 Msa1406040:intron
GTTGATGGGTCAGTCGAAAC+CGG 0.521835 tig0023178:+53317 Msa1406040:CDS
AGTATTCACTGGTGGGCCGG+GGG 0.524172 tig0023178:+54480 Msa1406040:CDS
CTGCAGGTAGATCAAGGCCT+TGG 0.525854 tig0023178:+56086 Msa1406040:intron
GGTTTAGATGTATCAATGTA+GGG 0.527431 tig0023178:+53295 Msa1406040:CDS
TCCATATGGGTTGACCGTGC+TGG 0.529325 tig0023178:+54517 Msa1406040:CDS
TGTATCAATGTAGGGTTGAT+GGG 0.529350 tig0023178:+53303 Msa1406040:CDS
TTAGGGATAGGGTTCAGAAA+TGG 0.531784 tig0023178:+53520 Msa1406040:CDS
ACCAATCATATCTGTTCCAA+TGG 0.531948 tig0023178:+54727 Msa1406040:CDS
AGAGTAAAAGCATCATAACT+TGG 0.532470 tig0023178:-56257 None:intergenic
CCCGATTTCAATTTCTCCGG+AGG 0.533340 tig0023178:+52817 Msa1406040:CDS
TCGTCTTGGTGTTTCGATCG+AGG 0.534927 tig0023178:-53068 None:intergenic
TGGTACTGGTATCGATAAGA+TGG 0.535826 tig0023178:+54807 Msa1406040:CDS
TGAACTCCCTGCTGCTACTG+GGG 0.537050 tig0023178:+56798 Msa1406040:three_prime_UTR
TTGTTTGTGAGGTTGTTGAA+GGG 0.537219 tig0023178:+53607 Msa1406040:CDS
TAAACCACACCACACTACAC+TGG 0.537392 tig0023178:-52492 None:intergenic
AAGAGAGGGAGTATAAGAGG+AGG 0.538246 tig0023178:+53394 Msa1406040:CDS
GGCTGTTGAAGCAGCTTACA+CGG 0.541865 tig0023178:-54444 None:intergenic
AGATGAGGTGGTGGTTGTAG+AGG 0.543025 tig0023178:-52550 None:intergenic
AATGGAGGAATTAGTGCAGA+TGG 0.543155 tig0023178:+54766 Msa1406040:CDS
CCTACAATCCTCATCACAAA+GGG 0.543362 tig0023178:-56991 None:intergenic
GATAGCGACGGTGGCGGTGA+GGG 0.545268 tig0023178:-52755 None:intergenic
GTTCTACCAAACAAACTTAG+CGG 0.546093 tig0023178:+53012 Msa1406040:CDS
GTTGAGTTGAGATGAGGTGG+TGG 0.553258 tig0023178:-52559 None:intergenic
GTTGGACGCCCTCCTCGCCC+AGG 0.555798 tig0023178:-54020 None:intergenic
AGCAAGGGAGGGTTAGTGCT+AGG 0.557451 tig0023178:+53484 Msa1406040:CDS
CCACCAGTGCTTGTCCTCCA+TGG 0.557742 tig0023178:+56206 Msa1406040:CDS
GGAAGAAATATTTCAGCCAT+AGG 0.557908 tig0023178:+56746 Msa1406040:three_prime_UTR
TACGGCGGTGAGGAGGAGGA+GGG 0.558931 tig0023178:-52636 None:intergenic
AGGACAAGCACTGGTGGTGG+TGG 0.558995 tig0023178:-56200 None:intergenic
CAGGCTTCGCTTCAGCCAGG+AGG 0.559209 tig0023178:+54138 Msa1406040:intron
GATGTTGAGTAAGCAAGGGA+GGG 0.559985 tig0023178:+53473 Msa1406040:CDS
GAAGGGAAAACCAATGCTGA+TGG 0.561077 tig0023178:+53219 Msa1406040:CDS
TTGAGAAGGTTGATATGGAA+GGG 0.561158 tig0023178:+53202 Msa1406040:CDS
ACACGGAGAGTTCGGTTGCG+TGG 0.562344 tig0023178:-54427 None:intergenic
GGATGAAGTGCCCTCCATAT+GGG 0.563784 tig0023178:+54504 Msa1406040:CDS
TTTAACAACAACGGCGGTGA+AGG 0.564862 tig0023178:+52889 Msa1406040:CDS
TGGTTGTTACGGCGGTGAGG+AGG 0.565196 tig0023178:-52643 None:intergenic
GTGTATGCCTTTGCAGAACA+TGG 0.566174 tig0023178:+56502 Msa1406040:CDS
ACCACCACCTCCACCACCGG+AGG 0.567000 tig0023178:-52863 None:intergenic
TAGCAACTTCTTGAATCCTC+AGG 0.567074 tig0023178:+54227 Msa1406040:CDS
GGTCACTATGGTGGTTGTGT+AGG 0.572314 tig0023178:+56227 Msa1406040:CDS
AAGCTGAGTCCAGTATTCAC+TGG 0.572634 tig0023178:+54469 Msa1406040:CDS
AGGCTTCGCTTCAGCCAGGA+GGG 0.573416 tig0023178:+54139 Msa1406040:intron
GAGGGCACTTCATCCACCCC+CGG 0.574911 tig0023178:-54496 None:intergenic
AAGTCTGTGGAGGAAGGTGC+TGG 0.575143 tig0023178:+56173 Msa1406040:CDS
CAATGTTGGAAAACAAAGCA+AGG 0.575395 tig0023178:-53887 None:intergenic
AATGGTGGTTAAGCGATTGG+AGG 0.576367 tig0023178:-52608 None:intergenic
GATGAGGTGGTGGTTGTAGA+GGG 0.578450 tig0023178:-52549 None:intergenic
GAGTCAAAGTTAATTGGTGA+CGG 0.579143 tig0023178:-56136 None:intergenic
CCAACCACCACCTCCACCAC+CGG 0.579282 tig0023178:-52866 None:intergenic
TTCGTTCGCGGAGAGTATGT+GGG 0.579595 tig0023178:+53260 Msa1406040:CDS
CAGTTGAAGTCTGTGGAGGA+AGG 0.582370 tig0023178:+56167 Msa1406040:CDS
CTGAGTGGAGTATTGTTCCT+GGG 0.582646 tig0023178:+54003 Msa1406040:CDS
GTAGATCAAGGCCTTGGTGT+TGG 0.582725 tig0023178:+56092 Msa1406040:CDS
AGTATTGTTCCTGGGCGAGG+AGG 0.583721 tig0023178:+54011 Msa1406040:CDS
AGTTATCAATAGTAGACCGC+AGG 0.583946 tig0023178:-56889 None:intergenic
AGGGGATGTTGAGTAAGCAA+GGG 0.584583 tig0023178:+53469 Msa1406040:CDS
GTCTATAGGAGAATGGGTCA+GGG 0.584875 tig0023178:+56571 Msa1406040:CDS
GGAAGTTCAAAAGATGTCAA+AGG 0.585343 tig0023178:+56535 Msa1406040:CDS
GCGGCCTGATGAGAAGAATG+AGG 0.586532 tig0023178:+53920 Msa1406040:CDS
GGAGGAGATAGCGACGGTGG+CGG 0.588211 tig0023178:-52761 None:intergenic
TCAAATGTAATAGTCCCTCC+TGG 0.588321 tig0023178:-54153 None:intergenic
ATTCTCCTATAGACTTCTGT+CGG 0.588523 tig0023178:-56562 None:intergenic
ACGGCGGTGAGGAGGAGGAG+GGG 0.589111 tig0023178:-52635 None:intergenic
ACGGAGCTATAGTTGGAAGC+AGG 0.591154 tig0023178:+54875 Msa1406040:CDS
CTAGAAAGTTTAGCTACATG+TGG 0.591287 tig0023178:+53174 Msa1406040:CDS
TATGCACATCCGTATTTGGA+TGG 0.591352 tig0023178:+54394 Msa1406040:CDS
CGGCCTGATGAGAAGAATGA+GGG 0.591730 tig0023178:+53921 Msa1406040:CDS
TAATGTCCAATTCATGAGAA+CGG 0.592439 tig0023178:+56927 Msa1406040:three_prime_UTR
CGGAGGAAGGACGAGATATG+TGG 0.593554 tig0023178:-52666 None:intergenic
AGGTTTATAAAGAGATTAAG+GGG 0.594005 tig0023178:+53451 Msa1406040:CDS
GAAGGAAGAAGAAGAAGACA+TGG 0.595924 tig0023178:-52581 None:intergenic
TGTTTGTGAGGTTGTTGAAG+GGG 0.596101 tig0023178:+53608 Msa1406040:CDS
AGTGAGGAAGAGAGCAGAGG+CGG 0.597622 tig0023178:-52785 None:intergenic
CACAACCACCATAGTGACCA+TGG 0.599148 tig0023178:-56223 None:intergenic
ATCGGTGCCATGTTCTGCAA+AGG 0.600282 tig0023178:-56509 None:intergenic
AGCTTGGTAATGTTGTTGAA+GGG 0.601640 tig0023178:+53664 Msa1406040:CDS
TACGCGCGAGGTTGTTTGTG+AGG 0.602411 tig0023178:+53596 Msa1406040:CDS
CTGAGTCCAGTATTCACTGG+TGG 0.604435 tig0023178:+54472 Msa1406040:CDS
GGAGGTGGAGGATCTTCCTC+CGG 0.605595 tig0023178:+52847 Msa1406040:CDS
AGCACGGTCAACCCATATGG+AGG 0.608832 tig0023178:-54515 None:intergenic
TATGCGGTTGATCATAACTC+AGG 0.608919 tig0023178:+56640 Msa1406040:CDS
TGACCATGGAGGACAAGCAC+TGG 0.609873 tig0023178:-56209 None:intergenic
ACCTCAGGAGCCAAAAGACA+AGG 0.610574 tig0023178:-53432 None:intergenic
TTTACAAGCTAATATTACAA+GGG 0.614814 tig0023178:+54834 Msa1406040:CDS
GTCCTCCATGGTCACTATGG+TGG 0.615702 tig0023178:+56218 Msa1406040:CDS
AACCCCAGTGTAGTGTGGTG+TGG 0.619768 tig0023178:+52488 Msa1406040:five_prime_UTR
CACACGCGCTCAGCTTCAGA+AGG 0.620020 tig0023178:+53149 Msa1406040:CDS
TGAAGGGTATGCTTGTGCTC+AGG 0.620080 tig0023178:+53551 Msa1406040:CDS
CTCCGGAGAAATTGAAATCG+GGG 0.620375 tig0023178:-52816 None:intergenic
TGAGTCCAGTATTCACTGGT+GGG 0.621283 tig0023178:+54473 Msa1406040:CDS
TCCTACAATCCTCATCACAA+AGG 0.621357 tig0023178:-56992 None:intergenic
CAAAGAGTATTGCCTAATGG+AGG 0.624544 tig0023178:+54751 Msa1406040:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.625335 tig0023178:+56293 Msa1406040:CDS
AACCAACCCCAGTAGCAGCA+GGG 0.625840 tig0023178:-56804 None:intergenic
AACAACAACGGCGGTGAAGG+AGG 0.626206 tig0023178:+52892 Msa1406040:CDS
AGAAATGGTATCATGATGAA+GGG 0.626329 tig0023178:+53535 Msa1406040:CDS
GCGCGTGTGTATACACCACC+TGG 0.629270 tig0023178:-53135 None:intergenic
GTACCACTGAGGGTTGTTGG+AGG 0.632265 tig0023178:-54790 None:intergenic
GGTGGAGGATCTTCCTCCGG+TGG 0.632685 tig0023178:+52850 Msa1406040:CDS
ATGGTTGAGTTGAGATGAGG+TGG 0.633917 tig0023178:-52562 None:intergenic
TCTCCAGTTGAAGTCTGTGG+AGG 0.634494 tig0023178:+56163 Msa1406040:CDS
TGGAGGACAAGCACTGGTGG+TGG 0.638082 tig0023178:-56203 None:intergenic
TGGCTGAAATATTTCTTCCG+CGG 0.639329 tig0023178:-56742 None:intergenic
ATCGATACCAGTACCACTGA+GGG 0.640712 tig0023178:-54800 None:intergenic
AGATAGCGACGGTGGCGGTG+AGG 0.640755 tig0023178:-52756 None:intergenic
TTTGAACATAGGAATCTGCA+AGG 0.642514 tig0023178:+54171 Msa1406040:CDS
CGGCTGAAGTTAGTACTGAG+TGG 0.644179 tig0023178:+53988 Msa1406040:CDS
TGGTGGTTGTTACGGCGGTG+AGG 0.646534 tig0023178:-52646 None:intergenic
GGTGGTTGGTTTAACAACAA+CGG 0.648665 tig0023178:+52880 Msa1406040:CDS
GGCGGAGGAGATAGCGACGG+TGG 0.648996 tig0023178:-52764 None:intergenic
AATGTTGGAAAACAAAGCAA+GGG 0.649560 tig0023178:-53886 None:intergenic
CCAACATTGAAGTGAATCCG+CGG 0.651264 tig0023178:+53901 Msa1406040:CDS
ACCCAAACCCCAGTGTAGTG+TGG 0.655356 tig0023178:+52483 Msa1406040:five_prime_UTR
ATCAGTGAGGAAGAGAGCAG+AGG 0.656881 tig0023178:-52788 None:intergenic
GACATGGTATCCCTAAAACC+AGG 0.657656 tig0023178:+53117 Msa1406040:CDS
TCTATAGGAGAATGGGTCAG+GGG 0.660220 tig0023178:+56572 Msa1406040:CDS
GGAAATTGCTGCCAACACCA+AGG 0.665668 tig0023178:-56103 None:intergenic
GAAGCTTGGTTTAGTGAGAG+CGG 0.666822 tig0023178:+56615 Msa1406040:CDS
TGGCAATCTGAATACGCGCG+AGG 0.668463 tig0023178:+53584 Msa1406040:CDS
GCACGGTCAACCCATATGGA+GGG 0.670151 tig0023178:-54514 None:intergenic
TACATGTGGAATGTTTGAGA+AGG 0.671038 tig0023178:+53188 Msa1406040:CDS
CCATGGAGGACAAGCACTGG+TGG 0.671793 tig0023178:-56206 None:intergenic
GACATGGTTGAGTTGAGATG+AGG 0.677137 tig0023178:-52565 None:intergenic
TTTAGTGAGAGCGGAATATG+CGG 0.680967 tig0023178:+56624 Msa1406040:CDS
TCAATGTTAAAAGTATGACC+CGG 0.683764 tig0023178:-53831 None:intergenic
GATAACACAAGGTTTGTGAA+CGG 0.685190 tig0023178:+54856 Msa1406040:CDS
GGACCTCCAACAACCCTCAG+TGG 0.685641 tig0023178:+54787 Msa1406040:CDS
AGGAAGGACGAGATATGTGG+TGG 0.698140 tig0023178:-52663 None:intergenic
GGCGGCGGAGGAGATAGCGA+CGG 0.700295 tig0023178:-52767 None:intergenic
ATATTACAAGGGATAACACA+AGG 0.704360 tig0023178:+54845 Msa1406040:CDS
GGAAAGTTGACATTTGACGG+AGG 0.710253 tig0023178:-52683 None:intergenic
GGTTGGTTTAACAACAACGG+CGG 0.712734 tig0023178:+52883 Msa1406040:CDS
ATATGTGGTGGTTGTTACGG+CGG 0.727510 tig0023178:-52651 None:intergenic
TATCGATACCAGTACCACTG+AGG 0.732661 tig0023178:-54801 None:intergenic
ATGGTATCCCTAAAACCAGG+TGG 0.758207 tig0023178:+53120 Msa1406040:CDS
AATCGGGGAGTGAATCAGTG+AGG 0.760589 tig0023178:-52801 None:intergenic
AGCAGCCAGAAACATCCTCG+AGG 0.763048 tig0023178:+56325 Msa1406040:CDS
TGTAAAAGCCAATATCACTG+AGG 0.767187 tig0023178:+54540 Msa1406040:CDS
AACCACACCACACTACACTG+GGG 0.778291 tig0023178:-52490 None:intergenic
AACCACCATAGTGACCATGG+AGG 0.809946 tig0023178:-56220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAACAAGTATAATAAAAT+GGG - tig0023178:54283-54302 None:intergenic 15.0%
!! AAAGAACAAGTATAATAAAA+TGG - tig0023178:54284-54303 None:intergenic 15.0%
!!! AGAAACAAAATTAACATTTT+GGG - tig0023178:54950-54969 None:intergenic 15.0%
!!! TAGAAACAAAATTAACATTT+TGG - tig0023178:54951-54970 None:intergenic 15.0%
!! ATTTAAATTCTAACCAAAAA+TGG - tig0023178:55011-55030 None:intergenic 15.0%
!!! AAAGGATTTTGAAAATATTT+GGG - tig0023178:55117-55136 None:intergenic 15.0%
!! AAAAAGAAGAAGAAAATTGA+AGG - tig0023178:52519-52538 None:intergenic 20.0%
!!! ATGGTTATTGTTTTTTGATT+TGG + tig0023178:53769-53788 Msa1406040:intron 20.0%
!!! TTTTACAAGCTAATATTACA+AGG + tig0023178:54833-54852 Msa1406040:CDS 20.0%
!! TTTACAAGCTAATATTACAA+GGG + tig0023178:54834-54853 Msa1406040:CDS 20.0%
!! ATATCAACAGCAATAATTAT+AGG - tig0023178:54924-54943 None:intergenic 20.0%
!!! TATAATTATTGCTGTTGATA+TGG + tig0023178:54923-54942 Msa1406040:intron 20.0%
!! AATTTAAATCTAGACTAAAG+TGG + tig0023178:55022-55041 Msa1406040:intron 20.0%
!! ATTTAAATCTAGACTAAAGT+GGG + tig0023178:55023-55042 Msa1406040:intron 20.0%
!!! GAAAGGATTTTGAAAATATT+TGG - tig0023178:55118-55137 None:intergenic 20.0%
!! ATAAAATAGATACTATCGAA+AGG - tig0023178:55135-55154 None:intergenic 20.0%
!! AAATTAGAAGTCTTAGAATA+TGG - tig0023178:55666-55685 None:intergenic 20.0%
!!! ATGATTGTGATTTTTTATAG+TGG + tig0023178:55781-55800 Msa1406040:intron 20.0%
!!! TGATTGTGATTTTTTATAGT+GGG + tig0023178:55782-55801 Msa1406040:intron 20.0%
!!! ACTATTTTACTGTAACTTTA+AGG + tig0023178:55976-55995 Msa1406040:intron 20.0%
!! CAAAAAAAAAAAAAATCGAG+TGG - tig0023178:57114-57133 None:intergenic 20.0%
!!! CACTCGATTTTTTTTTTTTT+TGG + tig0023178:57112-57131 Msa1406040:three_prime_UTR 20.0%
!!! TTTTTTTTTTGGTCTTGATT+TGG + tig0023178:57123-57142 Msa1406040:three_prime_UTR 20.0%
!! ATGTGATTACTGTACTATTT+TGG + tig0023178:52400-52419 Msa1406040:five_prime_UTR 25.0%
!! ATTTGTTGCAGTAAGTAATT+TGG + tig0023178:52423-52442 Msa1406040:five_prime_UTR 25.0%
!! ATCATTGTTGTTATTATCGT+CGG - tig0023178:52713-52732 None:intergenic 25.0%
!!! AGAAGATTCATTTTTAGACA+TGG + tig0023178:53101-53120 Msa1406040:CDS 25.0%
! TTAATCTCTTTATAAACCTC+AGG - tig0023178:53450-53469 None:intergenic 25.0%
! TGAGGTTTATAAAGAGATTA+AGG + tig0023178:53449-53468 Msa1406040:CDS 25.0%
! GAGGTTTATAAAGAGATTAA+GGG + tig0023178:53450-53469 Msa1406040:CDS 25.0%
! AGGTTTATAAAGAGATTAAG+GGG + tig0023178:53451-53470 Msa1406040:CDS 25.0%
!! TCAGTTGAATATTCAGTTTT+TGG + tig0023178:53638-53657 Msa1406040:CDS 25.0%
!! ATACTTTTAACATTGAAGCT+GGG + tig0023178:53838-53857 Msa1406040:CDS 25.0%
! CAGAAAACAAACACATAAAT+CGG - tig0023178:54105-54124 None:intergenic 25.0%
! TAAAATTACCTCAGTGATAT+TGG - tig0023178:54551-54570 None:intergenic 25.0%
!!! ATTCACTTATGGATTAGTAA+TGG + tig0023178:54681-54700 Msa1406040:CDS 25.0%
! TTTAAATCTAGACTAAAGTG+GGG + tig0023178:55024-55043 Msa1406040:intron 25.0%
!!! TTGCAGATTTTTTTTTCACA+TGG + tig0023178:55175-55194 Msa1406040:intron 25.0%
!!! TCATTCTTCTAATTTTTGGT+GGG + tig0023178:55730-55749 Msa1406040:intron 25.0%
! TGCTAGATAATGTATAGAAT+GGG - tig0023178:56411-56430 None:intergenic 25.0%
! TTGCTAGATAATGTATAGAA+TGG - tig0023178:56412-56431 None:intergenic 25.0%
! TGTTTGAATCTTGTAGAAAT+TGG + tig0023178:56769-56788 Msa1406040:three_prime_UTR 25.0%
!! TAAGATTTTAGATTATCCTG+CGG + tig0023178:56873-56892 Msa1406040:three_prime_UTR 25.0%
!!! TCTACTATTGATAACTTTTG+CGG + tig0023178:56896-56915 Msa1406040:three_prime_UTR 25.0%
!! CAGAATTTTTCATCAACTAA+CGG - tig0023178:57037-57056 None:intergenic 25.0%
!!! TTTGACTCATTCTATTTTTC+TGG + tig0023178:57067-57086 Msa1406040:three_prime_UTR 25.0%
GTAATCACATGCAGTAATTA+CGG - tig0023178:52390-52409 None:intergenic 30.0%
!! AATGTTTGAGAAGGTTGATA+TGG + tig0023178:53197-53216 Msa1406040:CDS 30.0%
AGGTTTAGATGTATCAATGT+AGG + tig0023178:53294-53313 Msa1406040:CDS 30.0%
GGTTTAGATGTATCAATGTA+GGG + tig0023178:53295-53314 Msa1406040:CDS 30.0%
TATGAGTGAAAAGGAGAAAA+TGG + tig0023178:53356-53375 Msa1406040:CDS 30.0%
!!! AGGAGAAAATGGAGTTTTTT+AGG + tig0023178:53367-53386 Msa1406040:CDS 30.0%
AGAAATGGTATCATGATGAA+GGG + tig0023178:53535-53554 Msa1406040:CDS 30.0%
!! ATTCAGTTTTTGGATAAGCT+TGG + tig0023178:53648-53667 Msa1406040:CDS 30.0%
! TCAATGTTAAAAGTATGACC+CGG - tig0023178:53834-53853 None:intergenic 30.0%
! CATACTTTTAACATTGAAGC+TGG + tig0023178:53837-53856 Msa1406040:CDS 30.0%
AATGTTGGAAAACAAAGCAA+GGG - tig0023178:53889-53908 None:intergenic 30.0%
TGAGATTAAGCTTAAAGAGT+TGG + tig0023178:53956-53975 Msa1406040:CDS 30.0%
GGACTATTACATTTGAACAT+AGG + tig0023178:54160-54179 Msa1406040:CDS 30.0%
AAAATGGGAAAAAGACTCAA+TGG - tig0023178:54268-54287 None:intergenic 30.0%
GGATGATCTTGCATTTAAAA+TGG + tig0023178:54369-54388 Msa1406040:intron 30.0%
TCATTTACACCATCCAAATA+CGG - tig0023178:54406-54425 None:intergenic 30.0%
! TATCACTGAGGTAATTTTAC+TGG + tig0023178:54552-54571 Msa1406040:intron 30.0%
! ACATTAGTTTCTTCTTGACT+TGG + tig0023178:54582-54601 Msa1406040:intron 30.0%
ATATTACAAGGGATAACACA+AGG + tig0023178:54845-54864 Msa1406040:CDS 30.0%
TCTAATAAGAGAACCATAGT+TGG + tig0023178:54967-54986 Msa1406040:intron 30.0%
ATTCTAACCAAAAATGGAAG+TGG - tig0023178:55005-55024 None:intergenic 30.0%
TTAAATCTAGACTAAAGTGG+GGG + tig0023178:55025-55044 Msa1406040:intron 30.0%
!!! GGTTTAAGCCTCATTTTTTA+TGG + tig0023178:55076-55095 Msa1406040:intron 30.0%
GGATATCTCCATAAAAAATG+AGG - tig0023178:55087-55106 None:intergenic 30.0%
!! GGATTTTGAAAATATTTGGG+AGG - tig0023178:55114-55133 None:intergenic 30.0%
AATGTCTTGTCATAAGTGTA+AGG + tig0023178:55231-55250 Msa1406040:intron 30.0%
ATGTCTTGTCATAAGTGTAA+GGG + tig0023178:55232-55251 Msa1406040:intron 30.0%
!! TTGTTTTCCTACATTGACTA+AGG + tig0023178:55260-55279 Msa1406040:intron 30.0%
!! TGTTTTCCTACATTGACTAA+GGG + tig0023178:55261-55280 Msa1406040:intron 30.0%
GCTTATTAGAGTTTATCTAC+TGG + tig0023178:55297-55316 Msa1406040:intron 30.0%
! AATGTTTTCACAAGCTATCT+TGG - tig0023178:55413-55432 None:intergenic 30.0%
AAGTCTTAGAATATGGACTT+GGG - tig0023178:55659-55678 None:intergenic 30.0%
CATCAAACAGGACTAAATTT+AGG - tig0023178:55704-55723 None:intergenic 30.0%
! TGCCTCATTCTTCTAATTTT+TGG + tig0023178:55726-55745 Msa1406040:intron 30.0%
CACCAAAAATTAGAAGAATG+AGG - tig0023178:55731-55750 None:intergenic 30.0%
!! CTCATTCTTCTAATTTTTGG+TGG + tig0023178:55729-55748 Msa1406040:intron 30.0%
ATTCTAGTCCAATGTATCTT+AGG - tig0023178:55756-55775 None:intergenic 30.0%
! GTTGTTGTTAACAATTTGGA+GGG - tig0023178:55860-55879 None:intergenic 30.0%
! TGTTGTTGTTAACAATTTGG+AGG - tig0023178:55861-55880 None:intergenic 30.0%
! GGTTGTTGTTGTTAACAATT+TGG - tig0023178:55864-55883 None:intergenic 30.0%
! TTACTGTAACTTTAAGGACA+CGG + tig0023178:55982-56001 Msa1406040:intron 30.0%
GAAACTGAGTCAAAGTTAAT+TGG - tig0023178:56145-56164 None:intergenic 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - tig0023178:56260-56279 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + tig0023178:56260-56279 Msa1406040:CDS 30.0%
! GTTATGATGCTTTTACTCTT+GGG + tig0023178:56261-56280 Msa1406040:CDS 30.0%
! TTATGATGCTTTTACTCTTG+GGG + tig0023178:56262-56281 Msa1406040:CDS 30.0%
GTACATCTTATGATTGTCAA+TGG + tig0023178:56361-56380 Msa1406040:intron 30.0%
TAGATAATGTATAGAATGGG+AGG - tig0023178:56408-56427 None:intergenic 30.0%
! ATCTTTTGAACTTCCTAGAT+CGG - tig0023178:56530-56549 None:intergenic 30.0%
CTCAAAATCTTTCTCCAAAT+CGG - tig0023178:56684-56703 None:intergenic 30.0%
CTATAGGTTACTCTCAAAAT+TGG + tig0023178:56829-56848 Msa1406040:three_prime_UTR 30.0%
TTACTCTCAAAATTGGTGTA+GGG + tig0023178:56836-56855 Msa1406040:three_prime_UTR 30.0%
TAATGTCCAATTCATGAGAA+CGG + tig0023178:56927-56946 Msa1406040:three_prime_UTR 30.0%
!!! TTTTTTTGGTCTTGATTTGG+TGG + tig0023178:57126-57145 Msa1406040:three_prime_UTR 30.0%
AGAGGAAAGTTGACATTTGA+CGG - tig0023178:52689-52708 None:intergenic 35.0%
!!! GGTGAGGGTTTTTTTGAAAA+GGG - tig0023178:52743-52762 None:intergenic 35.0%
!!! ATCTTGTGATTTTGGTTCGT+CGG - tig0023178:52959-52978 None:intergenic 35.0%
ACGAACCAAAATCACAAGAT+TGG + tig0023178:52959-52978 Msa1406040:CDS 35.0%
CGAACCAAAATCACAAGATT+GGG + tig0023178:52960-52979 Msa1406040:CDS 35.0%
! GAATCCCAATCTTGTGATTT+TGG - tig0023178:52967-52986 None:intergenic 35.0%
! GCTAAGTTTGTTTGGTAGAA+CGG - tig0023178:53013-53032 None:intergenic 35.0%
GTTCTACCAAACAAACTTAG+CGG + tig0023178:53012-53031 Msa1406040:CDS 35.0%
! TTGAATCCGCTAAGTTTGTT+TGG - tig0023178:53021-53040 None:intergenic 35.0%
CTAGAAAGTTTAGCTACATG+TGG + tig0023178:53174-53193 Msa1406040:CDS 35.0%
TACATGTGGAATGTTTGAGA+AGG + tig0023178:53188-53207 Msa1406040:CDS 35.0%
!! TTTGAGAAGGTTGATATGGA+AGG + tig0023178:53201-53220 Msa1406040:CDS 35.0%
!! TTGAGAAGGTTGATATGGAA+GGG + tig0023178:53202-53221 Msa1406040:CDS 35.0%
ATGTATCAATGTAGGGTTGA+TGG + tig0023178:53302-53321 Msa1406040:CDS 35.0%
! TGTATCAATGTAGGGTTGAT+GGG + tig0023178:53303-53322 Msa1406040:CDS 35.0%
ATATCAGGATCCATTTCAAC+CGG - tig0023178:53339-53358 None:intergenic 35.0%
! TTCTCCTTTTCACTCATATC+AGG - tig0023178:53354-53373 None:intergenic 35.0%
!!! AGTTTTTTAGGAGACAAGAG+AGG + tig0023178:53379-53398 Msa1406040:CDS 35.0%
!!! GTTTTTTAGGAGACAAGAGA+GGG + tig0023178:53380-53399 Msa1406040:CDS 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + tig0023178:53503-53522 Msa1406040:CDS 35.0%
CAGAAATGGTATCATGATGA+AGG + tig0023178:53534-53553 Msa1406040:CDS 35.0%
!! TGTGCTCAGGTTGTTAATTT+TGG + tig0023178:53564-53583 Msa1406040:CDS 35.0%
TTGTTTGTGAGGTTGTTGAA+GGG + tig0023178:53607-53626 Msa1406040:CDS 35.0%
!! AAGCTTGGTAATGTTGTTGA+AGG + tig0023178:53663-53682 Msa1406040:CDS 35.0%
!! AGCTTGGTAATGTTGTTGAA+GGG + tig0023178:53664-53683 Msa1406040:CDS 35.0%
TCAAAGAGAACTTCCAAAAC+AGG + tig0023178:53707-53726 Msa1406040:CDS 35.0%
! ACAAACATACACACCTGTTT+TGG - tig0023178:53723-53742 None:intergenic 35.0%
AATGTGCTTGTTTGTGTGTT+TGG + tig0023178:53744-53763 Msa1406040:intron 35.0%
CTTGTTTGTGTGTTTGGTTA+TGG + tig0023178:53750-53769 Msa1406040:intron 35.0%
TGGTGAATGTTTGTTTGTGT+TGG + tig0023178:53789-53808 Msa1406040:intron 35.0%
TTTGACAAAACAGCTTCTTC+CGG + tig0023178:53812-53831 Msa1406040:intron 35.0%
CAATGTTGGAAAACAAAGCA+AGG - tig0023178:53890-53909 None:intergenic 35.0%
TAAAGAGTTGGAGCAGAAAT+CGG + tig0023178:53968-53987 Msa1406040:CDS 35.0%
! TTTCTGTTTGATGTTTCTGC+AGG + tig0023178:54119-54138 Msa1406040:intron 35.0%
TTTGAACATAGGAATCTGCA+AGG + tig0023178:54171-54190 Msa1406040:CDS 35.0%
GGATTGAATAGATCTCTTAC+TGG + tig0023178:54192-54211 Msa1406040:CDS 35.0%
! CTTTAGTTTCTCATCTATGC+AGG + tig0023178:54300-54319 Msa1406040:intron 35.0%
TGTAAAAGCCAATATCACTG+AGG + tig0023178:54540-54559 Msa1406040:CDS 35.0%
!! TTCTTCTTGACTTGGCTATT+TGG + tig0023178:54590-54609 Msa1406040:intron 35.0%
!! TCTTCTTGACTTGGCTATTT+GGG + tig0023178:54591-54610 Msa1406040:intron 35.0%
CGTCAGAGTAAATTCACTTA+TGG + tig0023178:54670-54689 Msa1406040:CDS 35.0%
ACCAATCATATCTGTTCCAA+TGG + tig0023178:54727-54746 Msa1406040:CDS 35.0%
ACCATTGGAACAGATATGAT+TGG - tig0023178:54731-54750 None:intergenic 35.0%
GATAACACAAGGTTTGTGAA+CGG + tig0023178:54856-54875 Msa1406040:CDS 35.0%
ATTATAGGATGATAGTCACC+TGG - tig0023178:54909-54928 None:intergenic 35.0%
TGAAAATATTTGGGAGGTCA+TGG - tig0023178:55108-55127 None:intergenic 35.0%
! TGACAAGACATTTGAAACGT+CGG - tig0023178:55223-55242 None:intergenic 35.0%
TGTCTTGTCATAAGTGTAAG+GGG + tig0023178:55233-55252 Msa1406040:intron 35.0%
TCTAATAAGCCAATCCAAAC+AGG - tig0023178:55287-55306 None:intergenic 35.0%
!! TAAGCTATTTCTGTGGCAAA+TGG - tig0023178:55470-55489 None:intergenic 35.0%
!! GCTTACATAAGCTATTTCTG+TGG - tig0023178:55477-55496 None:intergenic 35.0%
TACCTAGTGCCGTATATTTA+GGG - tig0023178:55569-55588 None:intergenic 35.0%
AGTCTTAGAATATGGACTTG+GGG - tig0023178:55658-55677 None:intergenic 35.0%
GAAGTCTTAGAATATGGACT+TGG - tig0023178:55660-55679 None:intergenic 35.0%
AAACTCATCCTCATCTACTT+TGG - tig0023178:55817-55836 None:intergenic 35.0%
TTGTTAACAATTTGGAGGGA+AGG - tig0023178:55856-55875 None:intergenic 35.0%
TTAGAGTGACATGAATGTGA+GGG - tig0023178:55950-55969 None:intergenic 35.0%
ATTAGAGTGACATGAATGTG+AGG - tig0023178:55951-55970 None:intergenic 35.0%
! TACTGTAACTTTAAGGACAC+GGG + tig0023178:55983-56002 Msa1406040:intron 35.0%
!! CAGTTTTGATAGAGAGATAG+TGG - tig0023178:56069-56088 None:intergenic 35.0%
TATCTCTCTATCAAAACTGC+AGG + tig0023178:56070-56089 Msa1406040:intron 35.0%
!! ATTGGTGACGGTTAAAGAAT+GGG - tig0023178:56127-56146 None:intergenic 35.0%
!! AATTGGTGACGGTTAAAGAA+TGG - tig0023178:56128-56147 None:intergenic 35.0%
GAGTCAAAGTTAATTGGTGA+CGG - tig0023178:56139-56158 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+GGG + tig0023178:56263-56282 Msa1406040:CDS 35.0%
TTGTAACCCCTTACAGAATA+GGG - tig0023178:56290-56309 None:intergenic 35.0%
ACACAATCATTATTACCTCG+AGG - tig0023178:56343-56362 None:intergenic 35.0%
GAGGTACGTATACCTATTAA+AGG + tig0023178:56472-56491 Msa1406040:CDS 35.0%
TACACGTGTGTACCTTTAAT+AGG - tig0023178:56487-56506 None:intergenic 35.0%
GGAAGTTCAAAAGATGTCAA+AGG + tig0023178:56535-56554 Msa1406040:CDS 35.0%
ATTCTCCTATAGACTTCTGT+CGG - tig0023178:56565-56584 None:intergenic 35.0%
ACAGAAGTCTATAGGAGAAT+GGG + tig0023178:56565-56584 Msa1406040:CDS 35.0%
! GGTGCAATATTTTTCCGATT+TGG + tig0023178:56667-56686 Msa1406040:CDS 35.0%
!! CGATTTGGAGAAAGATTTTG+AGG + tig0023178:56682-56701 Msa1406040:CDS 35.0%
GGAAGAAATATTTCAGCCAT+AGG + tig0023178:56746-56765 Msa1406040:three_prime_UTR 35.0%
CTACAAGATTCAAACACCTA+TGG - tig0023178:56765-56784 None:intergenic 35.0%
GTTACTCTCAAAATTGGTGT+AGG + tig0023178:56835-56854 Msa1406040:three_prime_UTR 35.0%
!! TTGTTTTTCCCTTTGTGATG+AGG + tig0023178:56983-57002 Msa1406040:three_prime_UTR 35.0%
GAAGGAAGAAGAAGAAGACA+TGG - tig0023178:52584-52603 None:intergenic 40.0%
TGAAATGGTGGTTAAGCGAT+TGG - tig0023178:52614-52633 None:intergenic 40.0%
GAGATATGTGGTGGTTGTTA+CGG - tig0023178:52657-52676 None:intergenic 40.0%
! GTTGTTATTATCGTCGGAAG+AGG - tig0023178:52707-52726 None:intergenic 40.0%
!!! GGTTTTTTTGAAAAGGGAGG+AGG - tig0023178:52737-52756 None:intergenic 40.0%
!!! GAGGGTTTTTTTGAAAAGGG+AGG - tig0023178:52740-52759 None:intergenic 40.0%
!!! CGGTGAGGGTTTTTTTGAAA+AGG - tig0023178:52744-52763 None:intergenic 40.0%
ACCTCCGGAGAAATTGAAAT+CGG - tig0023178:52821-52840 None:intergenic 40.0%
!! GGTGGTTGGTTTAACAACAA+CGG + tig0023178:52880-52899 Msa1406040:CDS 40.0%
CGAAACACCAAGACGAAAAT+CGG + tig0023178:53075-53094 Msa1406040:CDS 40.0%
! TTCTGTTCCGATTTTCGTCT+TGG - tig0023178:53085-53104 None:intergenic 40.0%
!!! GTATACACCACCTGGTTTTA+GGG - tig0023178:53130-53149 None:intergenic 40.0%
!! TGTATACACCACCTGGTTTT+AGG - tig0023178:53131-53150 None:intergenic 40.0%
GGATCCTGATATGAGTGAAA+AGG + tig0023178:53347-53366 Msa1406040:CDS 40.0%
AGAGGAGGATTGATACTTCT+AGG + tig0023178:53409-53428 Msa1406040:CDS 40.0%
!! TACTTCTAGGCCTTGTCTTT+TGG + tig0023178:53422-53441 Msa1406040:CDS 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + tig0023178:53502-53521 Msa1406040:CDS 40.0%
TGTTGCAGAAGATTAGGGAT+AGG + tig0023178:53508-53527 Msa1406040:CDS 40.0%
GTTGCAGAAGATTAGGGATA+GGG + tig0023178:53509-53528 Msa1406040:CDS 40.0%
TTAGGGATAGGGTTCAGAAA+TGG + tig0023178:53520-53539 Msa1406040:CDS 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + tig0023178:53606-53625 Msa1406040:CDS 40.0%
TGTTTGTGAGGTTGTTGAAG+GGG + tig0023178:53608-53627 Msa1406040:CDS 40.0%
GGAAGTTCTCTTTGAACAAC+AGG - tig0023178:53702-53721 None:intergenic 40.0%
TTGACAAAACAGCTTCTTCC+GGG + tig0023178:53813-53832 Msa1406040:intron 40.0%
TCAAATGTAATAGTCCCTCC+TGG - tig0023178:54156-54175 None:intergenic 40.0%
TAGCAACTTCTTGAATCCTC+AGG + tig0023178:54227-54246 Msa1406040:CDS 40.0%
TTTCTCATCTATGCAGGCAT+AGG + tig0023178:54306-54325 Msa1406040:intron 40.0%
!! AGGCATAGGCATTGATGATT+TGG + tig0023178:54320-54339 Msa1406040:intron 40.0%
TGTGCTTTATGTACTGCTGT+AGG + tig0023178:54348-54367 Msa1406040:intron 40.0%
TATGCACATCCGTATTTGGA+TGG + tig0023178:54394-54413 Msa1406040:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - tig0023178:54468-54487 None:intergenic 40.0%
!!! TATTGGCTTTTACACCAGCA+CGG - tig0023178:54534-54553 None:intergenic 40.0%
CTGACGAGAAAAATTCTGCT+CGG - tig0023178:54656-54675 None:intergenic 40.0%
AGGCAATACTCTTTGACCAT+TGG - tig0023178:54746-54765 None:intergenic 40.0%
!! GGTCAAAGAGTATTGCCTAA+TGG + tig0023178:54748-54767 Msa1406040:CDS 40.0%
!! CAAAGAGTATTGCCTAATGG+AGG + tig0023178:54751-54770 Msa1406040:CDS 40.0%
TCTGCACTAATTCCTCCATT+AGG - tig0023178:54766-54785 None:intergenic 40.0%
AATGGAGGAATTAGTGCAGA+TGG + tig0023178:54766-54785 Msa1406040:CDS 40.0%
!! TGGTACTGGTATCGATAAGA+TGG + tig0023178:54807-54826 Msa1406040:CDS 40.0%
TTTGTGAACGGAGCTATAGT+TGG + tig0023178:54868-54887 Msa1406040:CDS 40.0%
AAGTGGGGGAAGAAAACAAA+AGG + tig0023178:55039-55058 Msa1406040:intron 40.0%
AACAAAAGGATGCATCAAGC+AGG + tig0023178:55053-55072 Msa1406040:intron 40.0%
ACAAAAGGATGCATCAAGCA+GGG + tig0023178:55054-55073 Msa1406040:intron 40.0%
GTCTTGTCATAAGTGTAAGG+GGG + tig0023178:55234-55253 Msa1406040:intron 40.0%
TCTTGTCATAAGTGTAAGGG+GGG + tig0023178:55235-55254 Msa1406040:intron 40.0%
AGCGCTATCATGATAAATGC+TGG + tig0023178:55506-55525 Msa1406040:intron 40.0%
!! AGTAAGCTGTTTCTGCAAAC+AGG + tig0023178:55543-55562 Msa1406040:intron 40.0%
GCAAACAGGCCCTAAATATA+CGG + tig0023178:55557-55576 Msa1406040:intron 40.0%
CTACCTAGTGCCGTATATTT+AGG - tig0023178:55570-55589 None:intergenic 40.0%
CTAAATATACGGCACTAGGT+AGG + tig0023178:55568-55587 Msa1406040:intron 40.0%
! GAATGAGGCATTCATCAAAC+AGG - tig0023178:55716-55735 None:intergenic 40.0%
TAGAGTGACATGAATGTGAG+GGG - tig0023178:55949-55968 None:intergenic 40.0%
TCAAAACTGCAGGTAGATCA+AGG + tig0023178:56080-56099 Msa1406040:intron 40.0%
GTTGTAACCCCTTACAGAAT+AGG - tig0023178:56291-56310 None:intergenic 40.0%
TTCTGTAAGGGGTTACAACA+TGG + tig0023178:56292-56311 Msa1406040:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + tig0023178:56293-56312 Msa1406040:CDS 40.0%
TATTACCTCGAGGATGTTTC+TGG - tig0023178:56333-56352 None:intergenic 40.0%
TTTCTTGTTCTTCCTACAGC+TGG + tig0023178:56444-56463 Msa1406040:intron 40.0%
GAAATCCGACAGAAGTCTAT+AGG + tig0023178:56557-56576 Msa1406040:CDS 40.0%
GACAGAAGTCTATAGGAGAA+TGG + tig0023178:56564-56583 Msa1406040:CDS 40.0%
TTTAGTGAGAGCGGAATATG+CGG + tig0023178:56624-56643 Msa1406040:CDS 40.0%
TATGCGGTTGATCATAACTC+AGG + tig0023178:56640-56659 Msa1406040:CDS 40.0%
GTTGATCATAACTCAGGAAC+AGG + tig0023178:56646-56665 Msa1406040:CDS 40.0%
CATGAGTCGTAGTGTATGTT+TGG + tig0023178:56709-56728 Msa1406040:three_prime_UTR 40.0%
!!! TGTTTGGTTCTTTTCTACCG+CGG + tig0023178:56725-56744 Msa1406040:three_prime_UTR 40.0%
TGGCTGAAATATTTCTTCCG+CGG - tig0023178:56745-56764 None:intergenic 40.0%
!!! TACTGGGGTTGGTTTTCTAT+AGG + tig0023178:56813-56832 Msa1406040:three_prime_UTR 40.0%
AGTTATCAATAGTAGACCGC+AGG - tig0023178:56892-56911 None:intergenic 40.0%
TTCCATCCGTTCTCATGAAT+TGG - tig0023178:56936-56955 None:intergenic 40.0%
CCTACAATCCTCATCACAAA+GGG - tig0023178:56994-57013 None:intergenic 40.0%
TCCTACAATCCTCATCACAA+AGG - tig0023178:56995-57014 None:intergenic 40.0%
!!! TTTTGGTCTTGATTTGGTGG+TGG + tig0023178:57129-57148 Msa1406040:three_prime_UTR 40.0%
AAACCACACCACACTACACT+GGG - tig0023178:52494-52513 None:intergenic 45.0%
TAAACCACACCACACTACAC+TGG - tig0023178:52495-52514 None:intergenic 45.0%
!! ATGGTTGAGTTGAGATGAGG+TGG - tig0023178:52565-52584 None:intergenic 45.0%
!! GACATGGTTGAGTTGAGATG+AGG - tig0023178:52568-52587 None:intergenic 45.0%
AATGGTGGTTAAGCGATTGG+AGG - tig0023178:52611-52630 None:intergenic 45.0%
ATATGTGGTGGTTGTTACGG+CGG - tig0023178:52654-52673 None:intergenic 45.0%
AGTTGACATTTGACGGAGGA+AGG - tig0023178:52682-52701 None:intergenic 45.0%
GGAAAGTTGACATTTGACGG+AGG - tig0023178:52686-52705 None:intergenic 45.0%
CTCCCCGATTTCAATTTCTC+CGG + tig0023178:52814-52833 Msa1406040:CDS 45.0%
CTCCGGAGAAATTGAAATCG+GGG - tig0023178:52819-52838 None:intergenic 45.0%
CCTCCGGAGAAATTGAAATC+GGG - tig0023178:52820-52839 None:intergenic 45.0%
GATTTCAATTTCTCCGGAGG+TGG + tig0023178:52820-52839 Msa1406040:CDS 45.0%
!! GGTTGGTTTAACAACAACGG+CGG + tig0023178:52883-52902 Msa1406040:CDS 45.0%
TTTAACAACAACGGCGGTGA+AGG + tig0023178:52889-52908 Msa1406040:CDS 45.0%
GGTAGAACGGTTATGTTAGC+TGG - tig0023178:53000-53019 None:intergenic 45.0%
GACATGGTATCCCTAAAACC+AGG + tig0023178:53117-53136 Msa1406040:CDS 45.0%
ATGGTATCCCTAAAACCAGG+TGG + tig0023178:53120-53139 Msa1406040:CDS 45.0%
GAAGGGAAAACCAATGCTGA+TGG + tig0023178:53219-53238 Msa1406040:CDS 45.0%
CGCTAATGTTCCATCAGCAT+TGG - tig0023178:53232-53251 None:intergenic 45.0%
GTATGTGGGAGAAAGCTGAT+AGG + tig0023178:53274-53293 Msa1406040:CDS 45.0%
TCAGTCGAAACCGGTTGAAA+TGG + tig0023178:53326-53345 Msa1406040:CDS 45.0%
! GACAAGAGAGGGAGTATAAG+AGG + tig0023178:53391-53410 Msa1406040:CDS 45.0%
! AAGAGAGGGAGTATAAGAGG+AGG + tig0023178:53394-53413 Msa1406040:CDS 45.0%
AAGGGGATGTTGAGTAAGCA+AGG + tig0023178:53468-53487 Msa1406040:CDS 45.0%
AGGGGATGTTGAGTAAGCAA+GGG + tig0023178:53469-53488 Msa1406040:CDS 45.0%
GATGTTGAGTAAGCAAGGGA+GGG + tig0023178:53473-53492 Msa1406040:CDS 45.0%
AAGCTGGGAAACAAGCTTTG+AGG + tig0023178:53853-53872 Msa1406040:CDS 45.0%
CCAACATTGAAGTGAATCCG+CGG + tig0023178:53901-53920 Msa1406040:CDS 45.0%
CTTCCCTCATTCTTCTCATC+AGG - tig0023178:53927-53946 None:intergenic 45.0%
!! ACTGAGTGGAGTATTGTTCC+TGG + tig0023178:54002-54021 Msa1406040:CDS 45.0%
!! CTGAGTGGAGTATTGTTCCT+GGG + tig0023178:54003-54022 Msa1406040:CDS 45.0%
GCGTCCAACTTTGGTATTTG+CGG + tig0023178:54034-54053 Msa1406040:intron 45.0%
TTCGCCGCAAATACCAAAGT+TGG - tig0023178:54041-54060 None:intergenic 45.0%
! GACTAGTATCAGAGTACCTG+AGG - tig0023178:54246-54265 None:intergenic 45.0%
GGAGTATGCACATCCGTATT+TGG + tig0023178:54390-54409 Msa1406040:CDS 45.0%
AAGCTGAGTCCAGTATTCAC+TGG + tig0023178:54469-54488 Msa1406040:CDS 45.0%
TGAGTCCAGTATTCACTGGT+GGG + tig0023178:54473-54492 Msa1406040:CDS 45.0%
ATCGATACCAGTACCACTGA+GGG - tig0023178:54803-54822 None:intergenic 45.0%
TATCGATACCAGTACCACTG+AGG - tig0023178:54804-54823 None:intergenic 45.0%
GTGCAAGCATCTACCAACTA+TGG - tig0023178:54983-55002 None:intergenic 45.0%
! GCTTGCACCACTTCCATTTT+TGG + tig0023178:54995-55014 Msa1406040:intron 45.0%
CAAAAGGATGCATCAAGCAG+GGG + tig0023178:55055-55074 Msa1406040:intron 45.0%
! ATTTGAAACGTCGGCTGATG+CGG - tig0023178:55214-55233 None:intergenic 45.0%
AACAGGCCCTTAGTCAATGT+AGG - tig0023178:55270-55289 None:intergenic 45.0%
! ACATTGACTAAGGGCCTGTT+TGG + tig0023178:55270-55289 Msa1406040:intron 45.0%
! TTGGTGGGCCTAAGATACAT+TGG + tig0023178:55745-55764 Msa1406040:intron 45.0%
GTTTGCAGCCAAAGTAGATG+AGG + tig0023178:55806-55825 Msa1406040:intron 45.0%
! GGATAAGGCTTGGTTGTTGT+TGG - tig0023178:55885-55904 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + tig0023178:55893-55912 Msa1406040:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + tig0023178:55894-55913 Msa1406040:intron 45.0%
GTTTCTCCAGTTGAAGTCTG+TGG + tig0023178:56160-56179 Msa1406040:CDS 45.0%
GGTTACAACATGGGTGAGAT+TGG + tig0023178:56302-56321 Msa1406040:CDS 45.0%
GTGTATGCCTTTGCAGAACA+TGG + tig0023178:56502-56521 Msa1406040:CDS 45.0%
AGTCTATAGGAGAATGGGTC+AGG + tig0023178:56570-56589 Msa1406040:CDS 45.0%
GTCTATAGGAGAATGGGTCA+GGG + tig0023178:56571-56590 Msa1406040:CDS 45.0%
TCTATAGGAGAATGGGTCAG+GGG + tig0023178:56572-56591 Msa1406040:CDS 45.0%
CTTCATACCAGCACCATAAG+AGG - tig0023178:56599-56618 None:intergenic 45.0%
!! TATGGTGCTGGTATGAAGCT+TGG + tig0023178:56601-56620 Msa1406040:CDS 45.0%
GAAGCTTGGTTTAGTGAGAG+CGG + tig0023178:56615-56634 Msa1406040:CDS 45.0%
GTCCAATTCATGAGAACGGA+TGG + tig0023178:56931-56950 Msa1406040:three_prime_UTR 45.0%
CCCTTTGTGATGAGGATTGT+AGG + tig0023178:56991-57010 Msa1406040:three_prime_UTR 45.0%
! GGTGGTGGCACAAGTATATT+TGG + tig0023178:57144-57163 Msa1406040:three_prime_UTR 45.0%
!!! TAAAATTGTTTTTTTTTTAT+AGG - tig0023178:55442-55461 None:intergenic 5.0%
! CTACACTGGGGTTTGGGTTT+GGG - tig0023178:52481-52500 None:intergenic 50.0%
! ACTACACTGGGGTTTGGGTT+TGG - tig0023178:52482-52501 None:intergenic 50.0%
ACCACACTACACTGGGGTTT+GGG - tig0023178:52487-52506 None:intergenic 50.0%
AACCACACCACACTACACTG+GGG - tig0023178:52493-52512 None:intergenic 50.0%
! GATGAGGTGGTGGTTGTAGA+GGG - tig0023178:52552-52571 None:intergenic 50.0%
! AGATGAGGTGGTGGTTGTAG+AGG - tig0023178:52553-52572 None:intergenic 50.0%
!! GTTGAGTTGAGATGAGGTGG+TGG - tig0023178:52562-52581 None:intergenic 50.0%
TAAGCGATTGGAGGCGAAGA+AGG - tig0023178:52602-52621 None:intergenic 50.0%
AGGAAGGACGAGATATGTGG+TGG - tig0023178:52666-52685 None:intergenic 50.0%
ATCAGTGAGGAAGAGAGCAG+AGG - tig0023178:52791-52810 None:intergenic 50.0%
AATCGGGGAGTGAATCAGTG+AGG - tig0023178:52804-52823 None:intergenic 50.0%
CCCGATTTCAATTTCTCCGG+AGG + tig0023178:52817-52836 Msa1406040:CDS 50.0%
TTCAATTTCTCCGGAGGTGG+CGG + tig0023178:52823-52842 Msa1406040:CDS 50.0%
!! TCGTCTTGGTGTTTCGATCG+AGG - tig0023178:53071-53090 None:intergenic 50.0%
!! AGCGTTGACGATTTCGTTCG+CGG + tig0023178:53248-53267 Msa1406040:CDS 50.0%
! TTTCGTTCGCGGAGAGTATG+TGG + tig0023178:53259-53278 Msa1406040:CDS 50.0%
! TTCGTTCGCGGAGAGTATGT+GGG + tig0023178:53260-53279 Msa1406040:CDS 50.0%
! GTTGATGGGTCAGTCGAAAC+CGG + tig0023178:53317-53336 Msa1406040:CDS 50.0%
ACCTCAGGAGCCAAAAGACA+AGG - tig0023178:53435-53454 None:intergenic 50.0%
GGATGTTGAGTAAGCAAGGG+AGG + tig0023178:53472-53491 Msa1406040:CDS 50.0%
! TGAAGGGTATGCTTGTGCTC+AGG + tig0023178:53551-53570 Msa1406040:CDS 50.0%
CCGCGGATTCACTTCAATGT+TGG - tig0023178:53904-53923 None:intergenic 50.0%
TCATTCTTCTCATCAGGCCG+CGG - tig0023178:53921-53940 None:intergenic 50.0%
CGGCCTGATGAGAAGAATGA+GGG + tig0023178:53921-53940 Msa1406040:CDS 50.0%
! CGGCTGAAGTTAGTACTGAG+TGG + tig0023178:53988-54007 Msa1406040:CDS 50.0%
AGCAGCTTACACGGAGAGTT+CGG - tig0023178:54438-54457 None:intergenic 50.0%
GGCTGTTGAAGCAGCTTACA+CGG - tig0023178:54447-54466 None:intergenic 50.0%
CTGAGTCCAGTATTCACTGG+TGG + tig0023178:54472-54491 Msa1406040:CDS 50.0%
! TGGATGAAGTGCCCTCCATA+TGG + tig0023178:54503-54522 Msa1406040:CDS 50.0%
! GGATGAAGTGCCCTCCATAT+GGG + tig0023178:54504-54523 Msa1406040:CDS 50.0%
ACGGAGCTATAGTTGGAAGC+AGG + tig0023178:54875-54894 Msa1406040:CDS 50.0%
TGGAAGCAGGAACATGTTCC+AGG + tig0023178:54888-54907 Msa1406040:CDS 50.0%
GCTGATGCGGTGGAATAACA+GGG - tig0023178:55201-55220 None:intergenic 50.0%
GACTAAGGGCCTGTTTGGAT+TGG + tig0023178:55275-55294 Msa1406040:intron 50.0%
GGCCCTAAATATACGGCACT+AGG + tig0023178:55564-55583 Msa1406040:intron 50.0%
CAGAACCAGCTTATCAGCTC+GGG - tig0023178:55620-55639 None:intergenic 50.0%
GCAGAACCAGCTTATCAGCT+CGG - tig0023178:55621-55640 None:intergenic 50.0%
!! GAGCTGATAAGCTGGTTCTG+CGG + tig0023178:55620-55639 Msa1406040:intron 50.0%
!! AGCTGATAAGCTGGTTCTGC+GGG + tig0023178:55621-55640 Msa1406040:intron 50.0%
TGGAGGGAAGGCAACTAGAA+GGG - tig0023178:55844-55863 None:intergenic 50.0%
TTGGAGGGAAGGCAACTAGA+AGG - tig0023178:55845-55864 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - tig0023178:55895-55914 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + tig0023178:55892-55911 Msa1406040:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + tig0023178:55898-55917 Msa1406040:intron 50.0%
TTTAGCCGACCCCACTTAGT+GGG - tig0023178:55906-55925 None:intergenic 50.0%
AGTGACATGAATGTGAGGGG+AGG - tig0023178:55946-55965 None:intergenic 50.0%
! GTAGATCAAGGCCTTGGTGT+TGG + tig0023178:56092-56111 Msa1406040:CDS 50.0%
GGAAATTGCTGCCAACACCA+AGG - tig0023178:56106-56125 None:intergenic 50.0%
TCTCCAGTTGAAGTCTGTGG+AGG + tig0023178:56163-56182 Msa1406040:CDS 50.0%
CTTCCTCCACAGACTTCAAC+TGG - tig0023178:56169-56188 None:intergenic 50.0%
CAGTTGAAGTCTGTGGAGGA+AGG + tig0023178:56167-56186 Msa1406040:CDS 50.0%
CTTGTCCTCCATGGTCACTA+TGG + tig0023178:56215-56234 Msa1406040:CDS 50.0%
AACCACCATAGTGACCATGG+AGG - tig0023178:56223-56242 None:intergenic 50.0%
CACAACCACCATAGTGACCA+TGG - tig0023178:56226-56245 None:intergenic 50.0%
GGTCACTATGGTGGTTGTGT+AGG + tig0023178:56227-56246 Msa1406040:CDS 50.0%
TTGGGGGTCCCTATTCTGTA+AGG + tig0023178:56279-56298 Msa1406040:CDS 50.0%
TGGGGGTCCCTATTCTGTAA+GGG + tig0023178:56280-56299 Msa1406040:CDS 50.0%
!! ATCGGTGCCATGTTCTGCAA+AGG - tig0023178:56512-56531 None:intergenic 50.0%
ACCCAAACCCCAGTGTAGTG+TGG + tig0023178:52483-52502 Msa1406040:five_prime_UTR 55.0%
CACCACACTACACTGGGGTT+TGG - tig0023178:52488-52507 None:intergenic 55.0%
AACCCCAGTGTAGTGTGGTG+TGG + tig0023178:52488-52507 Msa1406040:five_prime_UTR 55.0%
AGGAGGAGGGGTTGAAATGG+TGG - tig0023178:52626-52645 None:intergenic 55.0%
AGGAGGAGGAGGGGTTGAAA+TGG - tig0023178:52629-52648 None:intergenic 55.0%
CGGAGGAAGGACGAGATATG+TGG - tig0023178:52669-52688 None:intergenic 55.0%
AGTGAGGAAGAGAGCAGAGG+CGG - tig0023178:52788-52807 None:intergenic 55.0%
AACAACAACGGCGGTGAAGG+AGG + tig0023178:52892-52911 Msa1406040:CDS 55.0%
GCGGTGAAGGAGGTGATTTC+TGG + tig0023178:52902-52921 Msa1406040:CDS 55.0%
!!! TTTTGGTTCGTCGGCGAACG+CGG - tig0023178:52950-52969 None:intergenic 55.0%
!!! GCCTTGTCTTTTGGCTCCTG+AGG + tig0023178:53431-53450 Msa1406040:CDS 55.0%
! AGCAAGGGAGGGTTAGTGCT+AGG + tig0023178:53484-53503 Msa1406040:CDS 55.0%
TGGCAATCTGAATACGCGCG+AGG + tig0023178:53584-53603 Msa1406040:CDS 55.0%
TACGCGCGAGGTTGTTTGTG+AGG + tig0023178:53596-53615 Msa1406040:CDS 55.0%
GCGGCCTGATGAGAAGAATG+AGG + tig0023178:53920-53939 Msa1406040:CDS 55.0%
!! TGGAGTATTGTTCCTGGGCG+AGG + tig0023178:54008-54027 Msa1406040:CDS 55.0%
AGTATTGTTCCTGGGCGAGG+AGG + tig0023178:54011-54030 Msa1406040:CDS 55.0%
GTATTGTTCCTGGGCGAGGA+GGG + tig0023178:54012-54031 Msa1406040:CDS 55.0%
! TCCAGTATTCACTGGTGGGC+CGG + tig0023178:54477-54496 Msa1406040:CDS 55.0%
GCACGGTCAACCCATATGGA+GGG - tig0023178:54517-54536 None:intergenic 55.0%
AGCACGGTCAACCCATATGG+AGG - tig0023178:54518-54537 None:intergenic 55.0%
! TCCATATGGGTTGACCGTGC+TGG + tig0023178:54517-54536 Msa1406040:CDS 55.0%
ACCAGCACGGTCAACCCATA+TGG - tig0023178:54521-54540 None:intergenic 55.0%
GTACCACTGAGGGTTGTTGG+AGG - tig0023178:54793-54812 None:intergenic 55.0%
CCAGTACCACTGAGGGTTGT+TGG - tig0023178:54796-54815 None:intergenic 55.0%
CCAACAACCCTCAGTGGTAC+TGG + tig0023178:54793-54812 Msa1406040:CDS 55.0%
GGCTGATGCGGTGGAATAAC+AGG - tig0023178:55202-55221 None:intergenic 55.0%
TCAGTCCCGAGCTGATAAGC+TGG + tig0023178:55612-55631 Msa1406040:intron 55.0%
!! GCTGATAAGCTGGTTCTGCG+GGG + tig0023178:55622-55641 Msa1406040:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - tig0023178:55900-55919 None:intergenic 55.0%
GTTTAGCCGACCCCACTTAG+TGG - tig0023178:55907-55926 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+TGG + tig0023178:56086-56105 Msa1406040:intron 55.0%
! AAGTCTGTGGAGGAAGGTGC+TGG + tig0023178:56173-56192 Msa1406040:CDS 55.0%
TGACCATGGAGGACAAGCAC+TGG - tig0023178:56212-56231 None:intergenic 55.0%
GTCCTCCATGGTCACTATGG+TGG + tig0023178:56218-56237 Msa1406040:CDS 55.0%
GGGGGTCCCTATTCTGTAAG+GGG + tig0023178:56281-56300 Msa1406040:CDS 55.0%
AGCAGCCAGAAACATCCTCG+AGG + tig0023178:56325-56344 Msa1406040:CDS 55.0%
!! GCAGAACATGGCACCGATCT+AGG + tig0023178:56514-56533 Msa1406040:CDS 55.0%
ATGGGTCAGGGGTCCTCTTA+TGG + tig0023178:56583-56602 Msa1406040:CDS 55.0%
AGTGAACTCCCTGCTGCTAC+TGG + tig0023178:56796-56815 Msa1406040:three_prime_UTR 55.0%
GTGAACTCCCTGCTGCTACT+GGG + tig0023178:56797-56816 Msa1406040:three_prime_UTR 55.0%
TGAACTCCCTGCTGCTACTG+GGG + tig0023178:56798-56817 Msa1406040:three_prime_UTR 55.0%
AACCAACCCCAGTAGCAGCA+GGG - tig0023178:56807-56826 None:intergenic 55.0%
AAACCAACCCCAGTAGCAGC+AGG - tig0023178:56808-56827 None:intergenic 55.0%
TTGTTACGGCGGTGAGGAGG+AGG - tig0023178:52643-52662 None:intergenic 60.0%
TGGTTGTTACGGCGGTGAGG+AGG - tig0023178:52646-52665 None:intergenic 60.0%
TGGTGGTTGTTACGGCGGTG+AGG - tig0023178:52649-52668 None:intergenic 60.0%
! AATTTCTCCGGAGGTGGCGG+CGG + tig0023178:52826-52845 Msa1406040:CDS 60.0%
GGAGGTGGAGGATCTTCCTC+CGG + tig0023178:52847-52866 Msa1406040:CDS 60.0%
GCGCGTGTGTATACACCACC+TGG - tig0023178:53138-53157 None:intergenic 60.0%
CACACGCGCTCAGCTTCAGA+AGG + tig0023178:53149-53168 Msa1406040:CDS 60.0%
AGGCTTCGCTTCAGCCAGGA+GGG + tig0023178:54139-54158 Msa1406040:intron 60.0%
ACACGGAGAGTTCGGTTGCG+TGG - tig0023178:54430-54449 None:intergenic 60.0%
! CCAGTATTCACTGGTGGGCC+GGG + tig0023178:54478-54497 Msa1406040:CDS 60.0%
! CAGTATTCACTGGTGGGCCG+GGG + tig0023178:54479-54498 Msa1406040:CDS 60.0%
! AGTATTCACTGGTGGGCCGG+GGG + tig0023178:54480-54499 Msa1406040:CDS 60.0%
GGACCTCCAACAACCCTCAG+TGG + tig0023178:54787-54806 Msa1406040:CDS 60.0%
! TGAAACGTCGGCTGATGCGG+TGG - tig0023178:55211-55230 None:intergenic 60.0%
!! AGGACAAGCACTGGTGGTGG+TGG - tig0023178:56203-56222 None:intergenic 60.0%
!! TGGAGGACAAGCACTGGTGG+TGG - tig0023178:56206-56225 None:intergenic 60.0%
!! CCATGGAGGACAAGCACTGG+TGG - tig0023178:56209-56228 None:intergenic 60.0%
CCACCAGTGCTTGTCCTCCA+TGG + tig0023178:56206-56225 Msa1406040:CDS 60.0%
CTTCCTACAGCTGGCAGCTG+AGG + tig0023178:56453-56472 Msa1406040:intron 60.0%
GTACCTCAGCTGCCAGCTGT+AGG - tig0023178:56459-56478 None:intergenic 60.0%
CAGGGGTCCTCTTATGGTGC+TGG + tig0023178:56589-56608 Msa1406040:CDS 60.0%
TACGGCGGTGAGGAGGAGGA+GGG - tig0023178:52639-52658 None:intergenic 65.0%
TTACGGCGGTGAGGAGGAGG+AGG - tig0023178:52640-52659 None:intergenic 65.0%
! GATAGCGACGGTGGCGGTGA+GGG - tig0023178:52758-52777 None:intergenic 65.0%
! AGATAGCGACGGTGGCGGTG+AGG - tig0023178:52759-52778 None:intergenic 65.0%
GGAGGAGATAGCGACGGTGG+CGG - tig0023178:52764-52783 None:intergenic 65.0%
GAGGAAGAGAGCAGAGGCGG+CGG - tig0023178:52785-52804 None:intergenic 65.0%
GGTGGAGGATCTTCCTCCGG+TGG + tig0023178:52850-52869 Msa1406040:CDS 65.0%
GGAGGATCTTCCTCCGGTGG+TGG + tig0023178:52853-52872 Msa1406040:CDS 65.0%
! GGATCTTCCTCCGGTGGTGG+AGG + tig0023178:52856-52875 Msa1406040:CDS 65.0%
!! TCTTCCTCCGGTGGTGGAGG+TGG + tig0023178:52859-52878 Msa1406040:CDS 65.0%
CCAACCACCACCTCCACCAC+CGG - tig0023178:52869-52888 None:intergenic 65.0%
!! GCGAGGAGGGCGTCCAACTT+TGG + tig0023178:54025-54044 Msa1406040:CDS 65.0%
CTGCAGGCTTCGCTTCAGCC+AGG + tig0023178:54135-54154 Msa1406040:intron 65.0%
CAGGCTTCGCTTCAGCCAGG+AGG + tig0023178:54138-54157 Msa1406040:intron 65.0%
CCCGGCCCACCAGTGAATAC+TGG - tig0023178:54481-54500 None:intergenic 65.0%
!! GAGGGCACTTCATCCACCCC+CGG - tig0023178:54499-54518 None:intergenic 65.0%
CTCCCTGCTGCTACTGGGGT+TGG + tig0023178:56802-56821 Msa1406040:three_prime_UTR 65.0%
ACGGCGGTGAGGAGGAGGAG+GGG - tig0023178:52638-52657 None:intergenic 70.0%
GGCGGAGGAGATAGCGACGG+TGG - tig0023178:52767-52786 None:intergenic 70.0%
GGCGGCGGAGGAGATAGCGA+CGG - tig0023178:52770-52789 None:intergenic 70.0%
GAAGAGAGCAGAGGCGGCGG+AGG - tig0023178:52782-52801 None:intergenic 70.0%
!! TCCTCCGGTGGTGGAGGTGG+TGG + tig0023178:52862-52881 Msa1406040:CDS 70.0%
ACCACCACCTCCACCACCGG+AGG - tig0023178:52866-52885 None:intergenic 70.0%
!! CCGGTGGTGGAGGTGGTGGT+TGG + tig0023178:52866-52885 Msa1406040:CDS 70.0%
TCGTCGGCGAACGCGGTTGC+TGG - tig0023178:52943-52962 None:intergenic 70.0%
! ATTCACTGGTGGGCCGGGGG+TGG + tig0023178:54483-54502 Msa1406040:CDS 70.0%
! TTCTCCGGAGGTGGCGGCGG+AGG + tig0023178:52829-52848 Msa1406040:CDS 75.0%
TCCACCTCCGCCGCCACCTC+CGG - tig0023178:52836-52855 None:intergenic 75.0%
GTTGGACGCCCTCCTCGCCC+AGG - tig0023178:54023-54042 None:intergenic 75.0%
!! TCCGGAGGTGGCGGCGGAGG+TGG + tig0023178:52832-52851 Msa1406040:CDS 80.0%
!! GGAGGTGGCGGCGGAGGTGG+AGG + tig0023178:52835-52854 Msa1406040:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0023178 gene 52362 57209 52362 ID=Msa1406040;Name=Msa1406040
tig0023178 mRNA 52362 57209 52362 ID=Msa1406040-mRNA-1;Parent=Msa1406040;Name=Msa1406040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=221|1|1|1|1|1|7|507|803
tig0023178 exon 52362 53728 52362 ID=Msa1406040-mRNA-1:exon:24342;Parent=Msa1406040-mRNA-1
tig0023178 exon 53825 54046 53825 ID=Msa1406040-mRNA-1:exon:24343;Parent=Msa1406040-mRNA-1
tig0023178 exon 54141 54248 54141 ID=Msa1406040-mRNA-1:exon:24344;Parent=Msa1406040-mRNA-1
tig0023178 exon 54370 54561 54370 ID=Msa1406040-mRNA-1:exon:24345;Parent=Msa1406040-mRNA-1
tig0023178 exon 54661 54909 54661 ID=Msa1406040-mRNA-1:exon:24346;Parent=Msa1406040-mRNA-1
tig0023178 exon 56092 56346 56092 ID=Msa1406040-mRNA-1:exon:24347;Parent=Msa1406040-mRNA-1
tig0023178 exon 56463 57209 56463 ID=Msa1406040-mRNA-1:exon:24348;Parent=Msa1406040-mRNA-1
tig0023178 five_prime_UTR 52362 52582 52362 ID=Msa1406040-mRNA-1:five_prime_utr;Parent=Msa1406040-mRNA-1
tig0023178 CDS 52583 53728 52583 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 53825 54046 53825 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 54141 54248 54141 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 54370 54561 54370 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 54661 54909 54661 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 56092 56346 56092 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 CDS 56463 56702 56463 ID=Msa1406040-mRNA-1:cds;Parent=Msa1406040-mRNA-1
tig0023178 three_prime_UTR 56703 57209 56703 ID=Msa1406040-mRNA-1:three_prime_utr;Parent=Msa1406040-mRNA-1
Gene Sequence

>Msa1406040

ATGTCTTCTTCTTCTTCCTTCTTCGCCTCCAATCGCTTAACCACCATTTCAACCCCTCCTCCTCCTCACCGCCGTAACAACCACCACATATCTCGTCCTTCCTCCGTCAAATGTCAACTTTCCTCTTCCGACGATAATAACAACAATGATTCCTCCTCCCTTTTCAAAAAAACCCTCACCGCCACCGTCGCTATCTCCTCCGCCGCCTCTGCTCTCTTCCTCACTGATTCACTCCCCGATTTCAATTTCTCCGGAGGTGGCGGCGGAGGTGGAGGATCTTCCTCCGGTGGTGGAGGTGGTGGTTGGTTTAACAACAACGGCGGTGAAGGAGGTGATTTCTGGTCAAGAATTCTCTCACCAGCAACCGCGTTCGCCGACGAACCAAAATCACAAGATTGGGATTCACACGAGCTTCCAGCTAACATAACCGTTCTACCAAACAAACTTAGCGGATTCAAGAAATACAAAATCTCAGATATAATTTTCCTCGATCGAAACACCAAGACGAAAATCGGAACAGAAGATTCATTTTTAGACATGGTATCCCTAAAACCAGGTGGTGTATACACACGCGCTCAGCTTCAGAAGGAGCTAGAAAGTTTAGCTACATGTGGAATGTTTGAGAAGGTTGATATGGAAGGGAAAACCAATGCTGATGGAACATTAGCGTTGACGATTTCGTTCGCGGAGAGTATGTGGGAGAAAGCTGATAGGTTTAGATGTATCAATGTAGGGTTGATGGGTCAGTCGAAACCGGTTGAAATGGATCCTGATATGAGTGAAAAGGAGAAAATGGAGTTTTTTAGGAGACAAGAGAGGGAGTATAAGAGGAGGATTGATACTTCTAGGCCTTGTCTTTTGGCTCCTGAGGTTTATAAAGAGATTAAGGGGATGTTGAGTAAGCAAGGGAGGGTTAGTGCTAGGTTGTTGCAGAAGATTAGGGATAGGGTTCAGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAGGTTGTTAATTTTGGCAATCTGAATACGCGCGAGGTTGTTTGTGAGGTTGTTGAAGGGGATATTACTCAGTTGAATATTCAGTTTTTGGATAAGCTTGGTAATGTTGTTGAAGGGAATACTGAAAATCCTGTTGTTCAAAGAGAACTTCCAAAACAGCTTCTTCCGGGTCATACTTTTAACATTGAAGCTGGGAAACAAGCTTTGAGGAACATAAACTCCCTTGCTTTGTTTTCCAACATTGAAGTGAATCCGCGGCCTGATGAGAAGAATGAGGGAAGCATAATTGTTGAGATTAAGCTTAAAGAGTTGGAGCAGAAATCGGCTGAAGTTAGTACTGAGTGGAGTATTGTTCCTGGGCGAGGAGGGCGTCCAACTTTGGCTTCGCTTCAGCCAGGAGGGACTATTACATTTGAACATAGGAATCTGCAAGGATTGAATAGATCTCTTACTGGTTCAGTGACAACTAGCAACTTCTTGAATCCTCAGGATGATCTTGCATTTAAAATGGAGTATGCACATCCGTATTTGGATGGTGTAAATGATCCACGCAACCGAACTCTCCGTGTAAGCTGCTTCAACAGCCGAAAGCTGAGTCCAGTATTCACTGGTGGGCCGGGGGTGGATGAAGTGCCCTCCATATGGGTTGACCGTGCTGGTGTAAAAGCCAATATCACTGAGAATTTTTCTCGTCAGAGTAAATTCACTTATGGATTAGTAATGGAAGAGATAATAACACGTGATGAAACCAATCATATCTGTTCCAATGGTCAAAGAGTATTGCCTAATGGAGGAATTAGTGCAGATGGACCTCCAACAACCCTCAGTGGTACTGGTATCGATAAGATGGCATTTTTACAAGCTAATATTACAAGGGATAACACAAGGTTTGTGAACGGAGCTATAGTTGGAAGCAGGAACATGTTCCAGGTAGATCAAGGCCTTGGTGTTGGCAGCAATTTCCCATTCTTTAACCGTCACCAATTAACTTTGACTCAGTTTCTCCAGTTGAAGTCTGTGGAGGAAGGTGCTGGTAAACCACCACCACCAGTGCTTGTCCTCCATGGTCACTATGGTGGTTGTGTAGGTGATCTTCCAAGTTATGATGCTTTTACTCTTGGGGGTCCCTATTCTGTAAGGGGTTACAACATGGGTGAGATTGGAGCAGCCAGAAACATCCTCGAGCTGGCAGCTGAGGTACGTATACCTATTAAAGGTACACACGTGTATGCCTTTGCAGAACATGGCACCGATCTAGGAAGTTCAAAAGATGTCAAAGGAAATCCGACAGAAGTCTATAGGAGAATGGGTCAGGGGTCCTCTTATGGTGCTGGTATGAAGCTTGGTTTAGTGAGAGCGGAATATGCGGTTGATCATAACTCAGGAACAGGTGCAATATTTTTCCGATTTGGAGAAAGATTTTGA
Protein sequence

>Msa1406040

MSSSSSFFASNRLTTISTPPPPHRRNNHHISRPSSVKCQLSSSDDNNNNDSSSLFKKTLTATVAISSAASALFLTDSLPDFNFSGGGGGGGGSSSGGGGGGWFNNNGGEGGDFWSRILSPATAFADEPKSQDWDSHELPANITVLPNKLSGFKKYKISDIIFLDRNTKTKIGTEDSFLDMVSLKPGGVYTRAQLQKELESLATCGMFEKVDMEGKTNADGTLALTISFAESMWEKADRFRCINVGLMGQSKPVEMDPDMSEKEKMEFFRRQEREYKRRIDTSRPCLLAPEVYKEIKGMLSKQGRVSARLLQKIRDRVQKWYHDEGYACAQVVNFGNLNTREVVCEVVEGDITQLNIQFLDKLGNVVEGNTENPVVQRELPKQLLPGHTFNIEAGKQALRNINSLALFSNIEVNPRPDEKNEGSIIVEIKLKELEQKSAEVSTEWSIVPGRGGRPTLASLQPGGTITFEHRNLQGLNRSLTGSVTTSNFLNPQDDLAFKMEYAHPYLDGVNDPRNRTLRVSCFNSRKLSPVFTGGPGVDEVPSIWVDRAGVKANITENFSRQSKFTYGLVMEEIITRDETNHICSNGQRVLPNGGISADGPPTTLSGTGIDKMAFLQANITRDNTRFVNGAIVGSRNMFQVDQGLGVGSNFPFFNRHQLTLTQFLQLKSVEEGAGKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEVRIPIKGTHVYAFAEHGTDLGSSKDVKGNPTEVYRRMGQGSSYGAGMKLGLVRAEYAVDHNSGTGAIFFRFGERF*