Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880440 | XP_024628067.1 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880440 | sp|P0DI11|SP13B_ARATH | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.51e-70 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880440 | A0A072TVW9 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0880440 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0880440 | 0.835916 | 1.269550e-56 | -8.615850e-47 |
| Msa0002930 | Msa0880440 | 0.809649 | 1.704788e-50 | -8.615850e-47 |
| Msa0003700 | Msa0880440 | 0.819481 | 1.135495e-52 | -8.615850e-47 |
| Msa0004920 | Msa0880440 | 0.813383 | 2.631571e-51 | -8.615850e-47 |
| Msa0005050 | Msa0880440 | 0.809426 | 1.903250e-50 | -8.615850e-47 |
| Msa0016120 | Msa0880440 | 0.802680 | 5.001065e-49 | -8.615850e-47 |
| Msa0016670 | Msa0880440 | 0.829580 | 4.755082e-55 | -8.615850e-47 |
| Msa0017510 | Msa0880440 | 0.841411 | 4.829373e-58 | -8.615850e-47 |
| Msa0028640 | Msa0880440 | 0.804768 | 1.843869e-49 | -8.615850e-47 |
| Msa0032840 | Msa0880440 | -0.826914 | 2.088414e-54 | -8.615850e-47 |
| Msa0034270 | Msa0880440 | 0.820863 | 5.478292e-53 | -8.615850e-47 |
| Msa0036430 | Msa0880440 | 0.824547 | 7.608019e-54 | -8.615850e-47 |
| Msa0040450 | Msa0880440 | 0.820149 | 7.988619e-53 | -8.615850e-47 |
| Msa0044020 | Msa0880440 | 0.818719 | 1.692554e-52 | -8.615850e-47 |
| Msa0046100 | Msa0880440 | 0.811136 | 8.139624e-51 | -8.615850e-47 |
| Msa0046750 | Msa0880440 | 0.813225 | 2.850092e-51 | -8.615850e-47 |
| Msa0053110 | Msa0880440 | 0.829300 | 5.560996e-55 | -8.615850e-47 |
| Msa0069330 | Msa0880440 | 0.802371 | 5.791244e-49 | -8.615850e-47 |
| Msa0072370 | Msa0880440 | 0.819156 | 1.346676e-52 | -8.615850e-47 |
| Msa0072810 | Msa0880440 | 0.812582 | 3.942218e-51 | -8.615850e-47 |
| Msa0073670 | Msa0880440 | 0.816774 | 4.649864e-52 | -8.615850e-47 |
| Msa0090590 | Msa0880440 | 0.801175 | 1.019089e-48 | -8.615850e-47 |
| Msa0094120 | Msa0880440 | 0.814397 | 1.573458e-51 | -8.615850e-47 |
| Msa0098440 | Msa0880440 | 0.841906 | 3.576322e-58 | -8.615850e-47 |
| Msa0103000 | Msa0880440 | 0.831703 | 1.435921e-55 | -8.615850e-47 |
| Msa0105420 | Msa0880440 | 0.821973 | 3.036844e-53 | -8.615850e-47 |
| Msa0110970 | Msa0880440 | 0.860689 | 1.734042e-63 | -8.615850e-47 |
| Msa0113160 | Msa0880440 | 0.801593 | 8.368259e-49 | -8.615850e-47 |
| Msa0114540 | Msa0880440 | -0.825193 | 5.355488e-54 | -8.615850e-47 |
| Msa0118400 | Msa0880440 | 0.809671 | 1.685832e-50 | -8.615850e-47 |
| Msa0118570 | Msa0880440 | 0.803941 | 2.740544e-49 | -8.615850e-47 |
| Msa0120330 | Msa0880440 | 0.805904 | 1.065794e-49 | -8.615850e-47 |
| Msa0616220 | Msa0880440 | 0.814906 | 1.213484e-51 | -8.615850e-47 |
| Msa0618040 | Msa0880440 | 0.812568 | 3.970939e-51 | -8.615850e-47 |
| Msa0620240 | Msa0880440 | 0.978606 | 3.536486e-146 | -8.615850e-47 |
| Msa0620990 | Msa0880440 | 0.807482 | 4.947817e-50 | -8.615850e-47 |
| Msa0631120 | Msa0880440 | 0.816074 | 6.670309e-52 | -8.615850e-47 |
| Msa0650090 | Msa0880440 | 0.810701 | 1.011245e-50 | -8.615850e-47 |
| Msa0657970 | Msa0880440 | 0.802383 | 5.759711e-49 | -8.615850e-47 |
| Msa0682330 | Msa0880440 | 0.807016 | 6.210691e-50 | -8.615850e-47 |
| Msa0683570 | Msa0880440 | 0.803191 | 3.921153e-49 | -8.615850e-47 |
| Msa0684500 | Msa0880440 | 0.814787 | 1.289437e-51 | -8.615850e-47 |
| Msa0692080 | Msa0880440 | 0.828509 | 8.642465e-55 | -8.615850e-47 |
| Msa0696620 | Msa0880440 | 0.811116 | 8.224414e-51 | -8.615850e-47 |
| Msa0699550 | Msa0880440 | 0.814929 | 1.199106e-51 | -8.615850e-47 |
| Msa0702340 | Msa0880440 | 0.802843 | 4.628167e-49 | -8.615850e-47 |
| Msa0702590 | Msa0880440 | 0.803427 | 3.504392e-49 | -8.615850e-47 |
| Msa0702660 | Msa0880440 | 0.803043 | 4.208385e-49 | -8.615850e-47 |
| Msa0703230 | Msa0880440 | 0.808067 | 3.714761e-50 | -8.615850e-47 |
| Msa0705870 | Msa0880440 | 0.807030 | 6.168107e-50 | -8.615850e-47 |
| Msa0707220 | Msa0880440 | 0.806763 | 7.023287e-50 | -8.615850e-47 |
| Msa0708520 | Msa0880440 | 0.815475 | 9.072253e-52 | -8.615850e-47 |
| Msa0741900 | Msa0880440 | 0.807780 | 4.277362e-50 | -8.615850e-47 |
| Msa0747780 | Msa0880440 | 0.821063 | 4.925962e-53 | -8.615850e-47 |
| Msa0749760 | Msa0880440 | 0.806461 | 8.135880e-50 | -8.615850e-47 |
| Msa0754720 | Msa0880440 | -0.803228 | 3.853570e-49 | -8.615850e-47 |
| Msa0756630 | Msa0880440 | -0.813192 | 2.899107e-51 | -8.615850e-47 |
| Msa0760380 | Msa0880440 | 0.829326 | 5.481195e-55 | -8.615850e-47 |
| Msa0780250 | Msa0880440 | 0.816090 | 6.614140e-52 | -8.615850e-47 |
| Msa0804680 | Msa0880440 | 0.810532 | 1.100027e-50 | -8.615850e-47 |
| Msa0822990 | Msa0880440 | 0.822924 | 1.825710e-53 | -8.615850e-47 |
| Msa0824660 | Msa0880440 | 0.819345 | 1.219633e-52 | -8.615850e-47 |
| Msa0124340 | Msa0880440 | 0.843313 | 1.513053e-58 | -8.615850e-47 |
| Msa0130570 | Msa0880440 | 0.821266 | 4.423920e-53 | -8.615850e-47 |
| Msa0140570 | Msa0880440 | 0.806732 | 7.131027e-50 | -8.615850e-47 |
| Msa0140780 | Msa0880440 | 0.805235 | 1.472456e-49 | -8.615850e-47 |
| Msa0141600 | Msa0880440 | 0.801619 | 8.265336e-49 | -8.615850e-47 |
| Msa0143430 | Msa0880440 | 0.816348 | 5.792452e-52 | -8.615850e-47 |
| Msa0146260 | Msa0880440 | 0.832695 | 8.164550e-56 | -8.615850e-47 |
| Msa0147560 | Msa0880440 | 0.821983 | 3.020768e-53 | -8.615850e-47 |
| Msa0150570 | Msa0880440 | 0.804048 | 2.604470e-49 | -8.615850e-47 |
| Msa0153420 | Msa0880440 | 0.818443 | 1.954812e-52 | -8.615850e-47 |
| Msa0157290 | Msa0880440 | 0.841039 | 6.051527e-58 | -8.615850e-47 |
| Msa0171290 | Msa0880440 | 0.809618 | 1.731385e-50 | -8.615850e-47 |
| Msa0172350 | Msa0880440 | 0.810488 | 1.124572e-50 | -8.615850e-47 |
| Msa0186890 | Msa0880440 | 0.804423 | 2.175844e-49 | -8.615850e-47 |
| Msa0197930 | Msa0880440 | 0.803194 | 3.916685e-49 | -8.615850e-47 |
| Msa0203030 | Msa0880440 | 0.826119 | 3.230212e-54 | -8.615850e-47 |
| Msa0204980 | Msa0880440 | 0.800886 | 1.168006e-48 | -8.615850e-47 |
| Msa0219190 | Msa0880440 | 0.805660 | 1.199100e-49 | -8.615850e-47 |
| Msa0225740 | Msa0880440 | 0.818644 | 1.760676e-52 | -8.615850e-47 |
| Msa0230550 | Msa0880440 | -0.824559 | 7.559508e-54 | -8.615850e-47 |
| Msa0395870 | Msa0880440 | 0.809874 | 1.525079e-50 | -8.615850e-47 |
| Msa0402330 | Msa0880440 | 0.814607 | 1.413749e-51 | -8.615850e-47 |
| Msa0410500 | Msa0880440 | 0.840834 | 6.850208e-58 | -8.615850e-47 |
| Msa0410650 | Msa0880440 | 0.812145 | 4.913253e-51 | -8.615850e-47 |
| Msa0414950 | Msa0880440 | -0.804721 | 1.885354e-49 | -8.615850e-47 |
| Msa0417880 | Msa0880440 | 0.817251 | 3.632982e-52 | -8.615850e-47 |
| Msa0419820 | Msa0880440 | 0.823264 | 1.520780e-53 | -8.615850e-47 |
| Msa0423900 | Msa0880440 | 0.809025 | 2.320169e-50 | -8.615850e-47 |
| Msa0436280 | Msa0880440 | -0.809511 | 1.824931e-50 | -8.615850e-47 |
| Msa0436460 | Msa0880440 | 0.810331 | 1.215477e-50 | -8.615850e-47 |
| Msa0436500 | Msa0880440 | 0.820440 | 6.850261e-53 | -8.615850e-47 |
| Msa0461720 | Msa0880440 | 0.826514 | 2.601725e-54 | -8.615850e-47 |
| Msa0469030 | Msa0880440 | 0.802461 | 5.550415e-49 | -8.615850e-47 |
| Msa0475790 | Msa0880440 | 0.811418 | 7.070143e-51 | -8.615850e-47 |
| Msa0238890 | Msa0880440 | 0.824335 | 8.535865e-54 | -8.615850e-47 |
| Msa0243100 | Msa0880440 | 0.816434 | 5.540028e-52 | -8.615850e-47 |
| Msa0261340 | Msa0880440 | 0.801885 | 7.289714e-49 | -8.615850e-47 |
| Msa0264570 | Msa0880440 | 0.803306 | 3.712022e-49 | -8.615850e-47 |
| Msa0267760 | Msa0880440 | 0.812204 | 4.769688e-51 | -8.615850e-47 |
| Msa0280900 | Msa0880440 | 0.811082 | 8.364064e-51 | -8.615850e-47 |
| Msa0283520 | Msa0880440 | 0.819523 | 1.110763e-52 | -8.615850e-47 |
| Msa0287650 | Msa0880440 | 0.816012 | 6.885691e-52 | -8.615850e-47 |
| Msa0289890 | Msa0880440 | 0.810416 | 1.165564e-50 | -8.615850e-47 |
| Msa0299890 | Msa0880440 | 0.825576 | 4.347441e-54 | -8.615850e-47 |
| Msa0306300 | Msa0880440 | 0.816223 | 6.177419e-52 | -8.615850e-47 |
| Msa0308830 | Msa0880440 | 0.819831 | 9.448105e-53 | -8.615850e-47 |
| Msa0311860 | Msa0880440 | 0.806570 | 7.716418e-50 | -8.615850e-47 |
| Msa0316850 | Msa0880440 | 0.811099 | 8.294136e-51 | -8.615850e-47 |
| Msa0317250 | Msa0880440 | 0.813434 | 2.564495e-51 | -8.615850e-47 |
| Msa0320100 | Msa0880440 | 0.808943 | 2.415860e-50 | -8.615850e-47 |
| Msa0321860 | Msa0880440 | 0.805236 | 1.471401e-49 | -8.615850e-47 |
| Msa0332000 | Msa0880440 | 0.807410 | 5.123751e-50 | -8.615850e-47 |
| Msa0334040 | Msa0880440 | 0.806629 | 7.496093e-50 | -8.615850e-47 |
| Msa0337330 | Msa0880440 | 0.825432 | 4.702522e-54 | -8.615850e-47 |
| Msa0337850 | Msa0880440 | 0.820938 | 5.264803e-53 | -8.615850e-47 |
| Msa0355270 | Msa0880440 | 0.815214 | 1.036812e-51 | -8.615850e-47 |
| Msa0362780 | Msa0880440 | 0.810620 | 1.053094e-50 | -8.615850e-47 |
| Msa0483860 | Msa0880440 | 0.809072 | 2.266832e-50 | -8.615850e-47 |
| Msa0485990 | Msa0880440 | 0.814236 | 1.707544e-51 | -8.615850e-47 |
| Msa0500360 | Msa0880440 | 0.803986 | 2.683121e-49 | -8.615850e-47 |
| Msa0503580 | Msa0880440 | 0.832409 | 9.611491e-56 | -8.615850e-47 |
| Msa0507680 | Msa0880440 | 0.818580 | 1.819668e-52 | -8.615850e-47 |
| Msa0526710 | Msa0880440 | 0.809725 | 1.642051e-50 | -8.615850e-47 |
| Msa0537920 | Msa0880440 | 0.801734 | 7.828505e-49 | -8.615850e-47 |
| Msa0541860 | Msa0880440 | 0.803171 | 3.959478e-49 | -8.615850e-47 |
| Msa0547720 | Msa0880440 | 0.801751 | 7.767866e-49 | -8.615850e-47 |
| Msa0548660 | Msa0880440 | 0.811536 | 6.664485e-51 | -8.615850e-47 |
| Msa0555910 | Msa0880440 | 0.807663 | 4.528830e-50 | -8.615850e-47 |
| Msa0571140 | Msa0880440 | 0.899015 | 3.010307e-77 | -8.615850e-47 |
| Msa0574890 | Msa0880440 | 0.840053 | 1.096285e-57 | -8.615850e-47 |
| Msa0581760 | Msa0880440 | 0.801581 | 8.415927e-49 | -8.615850e-47 |
| Msa0590800 | Msa0880440 | 0.800035 | 1.740962e-48 | -8.615850e-47 |
| Msa0844560 | Msa0880440 | 0.805697 | 1.177777e-49 | -8.615850e-47 |
| Msa0850960 | Msa0880440 | 0.807551 | 4.782634e-50 | -8.615850e-47 |
| Msa0862100 | Msa0880440 | 0.826842 | 2.173281e-54 | -8.615850e-47 |
| Msa0872310 | Msa0880440 | 0.836708 | 7.989141e-57 | -8.615850e-47 |
| Msa0876200 | Msa0880440 | 0.800061 | 1.720016e-48 | -8.615850e-47 |
| Msa0878290 | Msa0880440 | 0.802333 | 5.895352e-49 | -8.615850e-47 |
| Msa0880140 | Msa0880440 | 0.841706 | 4.037404e-58 | -8.615850e-47 |
| Msa0880440 | Msa0885060 | 0.826759 | 2.274276e-54 | -8.615850e-47 |
| Msa0880440 | Msa0896970 | 0.816063 | 6.708363e-52 | -8.615850e-47 |
| Msa0880440 | Msa0905550 | 0.815328 | 9.778732e-52 | -8.615850e-47 |
| Msa0880440 | Msa0908050 | 0.807609 | 4.649530e-50 | -8.615850e-47 |
| Msa0880440 | Msa0911990 | 0.808711 | 2.707763e-50 | -8.615850e-47 |
| Msa0880440 | Msa0930780 | 0.841986 | 3.405393e-58 | -8.615850e-47 |
| Msa0880440 | Msa0936340 | 0.800182 | 1.625260e-48 | -8.615850e-47 |
| Msa0880440 | Msa0936410 | 0.810144 | 1.333798e-50 | -8.615850e-47 |
| Msa0880440 | Msa0937550 | 0.810345 | 1.207418e-50 | -8.615850e-47 |
| Msa0880440 | Msa0940460 | 0.801679 | 8.035168e-49 | -8.615850e-47 |
| Msa0880440 | Msa0961690 | 0.802567 | 5.278128e-49 | -8.615850e-47 |
| Msa0880440 | Msa0973250 | 0.808033 | 3.777601e-50 | -8.615850e-47 |
| Msa0880440 | Msa0982600 | 0.811969 | 5.364818e-51 | -8.615850e-47 |
| Msa0880440 | Msa1003750 | 0.810821 | 9.524176e-51 | -8.615850e-47 |
| Msa0880440 | Msa1009000 | 0.808282 | 3.344425e-50 | -8.615850e-47 |
| Msa0880440 | Msa1010000 | 0.811916 | 5.509793e-51 | -8.615850e-47 |
| Msa0880440 | Msa1012810 | 0.833084 | 6.534558e-56 | -8.615850e-47 |
| Msa0880440 | Msa1013770 | 0.814452 | 1.529761e-51 | -8.615850e-47 |
| Msa0880440 | Msa1019020 | 0.809378 | 1.948887e-50 | -8.615850e-47 |
| Msa0880440 | Msa1023400 | 0.800841 | 1.192506e-48 | -8.615850e-47 |
| Msa0880440 | Msa1037920 | 0.814540 | 1.462975e-51 | -8.615850e-47 |
| Msa0880440 | Msa1040830 | 0.815252 | 1.016704e-51 | -8.615850e-47 |
| Msa0880440 | Msa1041530 | 0.825334 | 4.960896e-54 | -8.615850e-47 |
| Msa0880440 | Msa1054240 | 0.824811 | 6.594216e-54 | -8.615850e-47 |
| Msa0880440 | Msa1055260 | 0.827948 | 1.179768e-54 | -8.615850e-47 |
| Msa0880440 | Msa1055280 | 0.829007 | 6.547684e-55 | -8.615850e-47 |
| Msa0880440 | Msa1063950 | 0.818651 | 1.754272e-52 | -8.615850e-47 |
| Msa0880440 | Msa1066490 | 0.809708 | 1.655904e-50 | -8.615850e-47 |
| Msa0880440 | Msa1082700 | 0.828520 | 8.587675e-55 | -8.615850e-47 |
| Msa0880440 | Msa1085200 | 0.802268 | 6.080388e-49 | -8.615850e-47 |
| Msa0880440 | Msa1094420 | 0.805294 | 1.430878e-49 | -8.615850e-47 |
| Msa0880440 | Msa1097560 | 0.812989 | 3.212457e-51 | -8.615850e-47 |
| Msa0880440 | Msa1097640 | 0.845691 | 3.467022e-59 | -8.615850e-47 |
| Msa0880440 | Msa1098560 | 0.803556 | 3.294601e-49 | -8.615850e-47 |
| Msa0880440 | Msa1104000 | 0.803276 | 3.765570e-49 | -8.615850e-47 |
| Msa0880440 | Msa1111110 | 0.811697 | 6.150011e-51 | -8.615850e-47 |
| Msa0880440 | Msa1127140 | 0.814945 | 1.189498e-51 | -8.615850e-47 |
| Msa0880440 | Msa1127890 | 0.824933 | 6.171198e-54 | -8.615850e-47 |
| Msa0880440 | Msa1127950 | 0.825827 | 3.790287e-54 | -8.615850e-47 |
| Msa0880440 | Msa1128710 | 0.826026 | 3.400274e-54 | -8.615850e-47 |
| Msa0880440 | Msa1133000 | 0.977560 | 5.013330e-144 | -8.615850e-47 |
| Msa0880440 | Msa1133710 | 0.800803 | 1.214036e-48 | -8.615850e-47 |
| Msa0880440 | Msa1134110 | 0.819759 | 9.812981e-53 | -8.615850e-47 |
| Msa0880440 | Msa1139810 | 0.830769 | 2.436339e-55 | -8.615850e-47 |
| Msa0880440 | Msa1147570 | 0.816733 | 4.750432e-52 | -8.615850e-47 |
| Msa0880440 | Msa1151910 | 0.817890 | 2.607489e-52 | -8.615850e-47 |
| Msa0880440 | Msa1165020 | 0.802317 | 5.940298e-49 | -8.615850e-47 |
| Msa0880440 | Msa1165870 | 0.807244 | 5.557709e-50 | -8.615850e-47 |
| Msa0880440 | Msa1166400 | 0.811835 | 5.740061e-51 | -8.615850e-47 |
| Msa0880440 | Msa1172670 | 0.804515 | 2.081723e-49 | -8.615850e-47 |
| Msa0880440 | Msa1209460 | 0.812702 | 3.711183e-51 | -8.615850e-47 |
| Msa0880440 | Msa1221560 | 0.809674 | 1.683641e-50 | -8.615850e-47 |
| Msa0880440 | Msa1222970 | 0.811645 | 6.312651e-51 | -8.615850e-47 |
| Msa0880440 | Msa1224840 | 0.804440 | 2.158398e-49 | -8.615850e-47 |
| Msa0880440 | Msa1236100 | 0.816140 | 6.447986e-52 | -8.615850e-47 |
| Msa0880440 | Msa1240310 | 0.812385 | 4.353472e-51 | -8.615850e-47 |
| Msa0880440 | Msa1252190 | 0.800057 | 1.722882e-48 | -8.615850e-47 |
| Msa0880440 | Msa1261010 | 0.806078 | 9.795886e-50 | -8.615850e-47 |
| Msa0880440 | Msa1263660 | 0.807973 | 3.890602e-50 | -8.615850e-47 |
| Msa0880440 | Msa1264020 | 0.825569 | 4.363143e-54 | -8.615850e-47 |
| Msa0880440 | Msa1267220 | 0.802978 | 4.340042e-49 | -8.615850e-47 |
| Msa0880440 | Msa1269580 | -0.810904 | 9.139526e-51 | -8.615850e-47 |
| Msa0880440 | Msa1271300 | 0.812342 | 4.449659e-51 | -8.615850e-47 |
| Msa0880440 | Msa1280420 | 0.804363 | 2.239089e-49 | -8.615850e-47 |
| Msa0880440 | Msa1292830 | 0.805812 | 1.114294e-49 | -8.615850e-47 |
| Msa0880440 | Msa1303250 | 0.806052 | 9.919814e-50 | -8.615850e-47 |
| Msa0880440 | Msa1308380 | 0.823558 | 1.298582e-53 | -8.615850e-47 |
| Msa0880440 | Msa1316830 | 0.801514 | 8.686468e-49 | -8.615850e-47 |
| Msa0880440 | Msa1319650 | 0.806001 | 1.016915e-49 | -8.615850e-47 |
| Msa0880440 | Msa1320740 | 0.833739 | 4.485251e-56 | -8.615850e-47 |
| Msa0880440 | Msa1351760 | 0.827737 | 1.326196e-54 | -8.615850e-47 |
| Msa0880440 | Msa1364470 | -0.807936 | 3.961946e-50 | -8.615850e-47 |
| Msa0880440 | Msa1373330 | 0.823914 | 1.071570e-53 | -8.615850e-47 |
| Msa0880440 | Msa1374040 | 0.835143 | 1.991881e-56 | -8.615850e-47 |
| Msa0880440 | Msa1374550 | 0.818878 | 1.557881e-52 | -8.615850e-47 |
| Msa0880440 | Msa1379990 | 0.802513 | 5.412824e-49 | -8.615850e-47 |
| Msa0880440 | Msa1382540 | 0.807974 | 3.889580e-50 | -8.615850e-47 |
| Msa0880440 | Msa1388820 | 0.815350 | 9.672997e-52 | -8.615850e-47 |
| Msa0880440 | Msa1390310 | 0.806476 | 8.077134e-50 | -8.615850e-47 |
| Msa0880440 | Msa1415640 | 0.806591 | 7.637493e-50 | -8.615850e-47 |
| Msa0880440 | Msa1417870 | 0.805151 | 1.533379e-49 | -8.615850e-47 |
| Msa0880440 | Msa1420060 | 0.821126 | 4.765125e-53 | -8.615850e-47 |
| Msa0880440 | Msa1427760 | 0.810824 | 9.510341e-51 | -8.615850e-47 |
| Msa0880440 | Msa1429360 | -0.808595 | 2.866897e-50 | -8.615850e-47 |
| Msa0880440 | Msa1430280 | 0.803002 | 4.291081e-49 | -8.615850e-47 |
| Msa0880440 | Msa1458410 | 0.802616 | 5.156211e-49 | -8.615850e-47 |
| Msa0880440 | Msa1459380 | 0.813144 | 2.970283e-51 | -8.615850e-47 |
| Msa0880440 | Msa1466990 | 0.808701 | 2.721953e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880440 | MtrunA17_Chr8g0386271 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Msa0880440 | MtrunA17_Chr3g0132091 | 59.631 | 379 | 99 | 20 | 33 | 390 | 6 | 351 | 2.43e-126 | 368 |
| Msa0880440 | MtrunA17_Chr7g0224821 | 44.068 | 236 | 107 | 8 | 1 | 234 | 1 | 213 | 8.15e-50 | 171 |
| Msa0880440 | MtrunA17_Chr2g0308321 | 59.231 | 130 | 48 | 2 | 45 | 174 | 122 | 246 | 1.37e-38 | 145 |
| Msa0880440 | MtrunA17_Chr8g0366211 | 87.912 | 91 | 11 | 0 | 49 | 139 | 39 | 129 | 2.11e-38 | 134 |
| Msa0880440 | MtrunA17_Chr4g0061651 | 54.887 | 133 | 48 | 4 | 45 | 174 | 75 | 198 | 3.29e-37 | 140 |
| Msa0880440 | MtrunA17_Chr5g0420051 | 47.712 | 153 | 75 | 3 | 45 | 196 | 131 | 279 | 2.31e-35 | 134 |
| Msa0880440 | MtrunA17_Chr1g0162871 | 67.901 | 81 | 26 | 0 | 99 | 179 | 104 | 184 | 6.94e-33 | 130 |
| Msa0880440 | MtrunA17_Chr2g0302791 | 52.252 | 111 | 52 | 1 | 66 | 176 | 107 | 216 | 1.17e-32 | 130 |
| Msa0880440 | MtrunA17_Chr3g0122411 | 56.311 | 103 | 42 | 2 | 98 | 197 | 164 | 266 | 1.23e-32 | 127 |
| Msa0880440 | MtrunA17_Chr7g0231911 | 56.842 | 95 | 41 | 0 | 89 | 183 | 139 | 233 | 1.63e-32 | 124 |
| Msa0880440 | MtrunA17_Chr7g0270541 | 48.837 | 129 | 63 | 2 | 58 | 183 | 101 | 229 | 2.53e-32 | 129 |
| Msa0880440 | MtrunA17_Chr1g0194121 | 58.163 | 98 | 41 | 0 | 85 | 182 | 133 | 230 | 3.16e-32 | 129 |
| Msa0880440 | MtrunA17_Chr8g0334671 | 54.867 | 113 | 47 | 1 | 66 | 174 | 150 | 262 | 5.14e-32 | 123 |
| Msa0880440 | MtrunA17_Chr7g0258471 | 34.138 | 290 | 136 | 9 | 94 | 372 | 137 | 382 | 1.95e-31 | 123 |
| Msa0880440 | MtrunA17_Chr8g0360361 | 62.353 | 85 | 32 | 0 | 99 | 183 | 65 | 149 | 3.23e-30 | 114 |
| Msa0880440 | MtrunA17_Chr4g0046991 | 67.568 | 74 | 24 | 0 | 99 | 172 | 73 | 146 | 2.08e-29 | 111 |
| Msa0880440 | MtrunA17_Chr2g0282521 | 61.905 | 84 | 32 | 0 | 93 | 176 | 58 | 141 | 6.04e-28 | 107 |
| Msa0880440 | MtrunA17_Chr8g0377421 | 45.614 | 114 | 59 | 1 | 99 | 209 | 132 | 245 | 3.60e-24 | 101 |
| Msa0880440 | MtrunA17_Chr2g0286661 | 52.703 | 74 | 35 | 0 | 99 | 172 | 103 | 176 | 8.43e-22 | 97.4 |
| Msa0880440 | MtrunA17_Chr8g0377401 | 57.534 | 73 | 31 | 0 | 99 | 171 | 162 | 234 | 2.84e-21 | 92.0 |
| Msa0880440 | MtrunA17_Chr2g0317041 | 61.702 | 47 | 18 | 0 | 99 | 145 | 99 | 145 | 9.62e-15 | 71.2 |
| Msa0880440 | MtrunA17_Chr8g0377431 | 44.286 | 70 | 39 | 0 | 85 | 154 | 137 | 206 | 8.11e-13 | 67.0 |
| Msa0880440 | MtrunA17_Chr1g0175031 | 57.447 | 47 | 20 | 0 | 99 | 145 | 74 | 120 | 9.01e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0880440 | AT5G50570.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0880440 | AT5G50570.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0880440 | AT5G50670.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0880440 | AT5G50670.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0880440 | AT1G76580.2 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 5.58e-36 | 139 |
| Msa0880440 | AT1G76580.3 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 6.51e-36 | 139 |
| Msa0880440 | AT1G76580.1 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 1.19e-35 | 139 |
| Msa0880440 | AT3G60030.1 | 58.716 | 109 | 41 | 1 | 94 | 198 | 122 | 230 | 5.73e-35 | 137 |
| Msa0880440 | AT2G47070.1 | 72.152 | 79 | 22 | 0 | 99 | 177 | 106 | 184 | 1.05e-34 | 136 |
| Msa0880440 | AT1G20980.1 | 43.333 | 180 | 80 | 6 | 2 | 179 | 42 | 201 | 1.39e-33 | 133 |
| Msa0880440 | AT1G69170.1 | 64.444 | 90 | 32 | 0 | 84 | 173 | 109 | 198 | 3.40e-33 | 128 |
| Msa0880440 | AT1G27370.6 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 7.43e-33 | 126 |
| Msa0880440 | AT1G27370.1 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G27370.5 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G27370.3 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G27370.2 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G27370.4 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G27370.7 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0880440 | AT1G53160.3 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 6.62e-31 | 116 |
| Msa0880440 | AT1G53160.2 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa0880440 | AT1G53160.1 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa0880440 | AT2G42200.1 | 61.905 | 84 | 32 | 0 | 96 | 179 | 71 | 154 | 1.32e-30 | 120 |
| Msa0880440 | AT3G57920.1 | 52.885 | 104 | 49 | 0 | 72 | 175 | 32 | 135 | 1.48e-30 | 120 |
| Msa0880440 | AT1G27360.2 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0880440 | AT1G27360.1 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0880440 | AT1G27360.3 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0880440 | AT1G27360.4 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0880440 | AT1G02065.1 | 63.095 | 84 | 31 | 0 | 89 | 172 | 178 | 261 | 5.39e-30 | 118 |
| Msa0880440 | AT2G33810.1 | 66.216 | 74 | 25 | 0 | 99 | 172 | 54 | 127 | 1.37e-29 | 111 |
| Msa0880440 | AT5G43270.3 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0880440 | AT5G43270.1 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0880440 | AT5G43270.2 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0880440 | AT3G15270.1 | 62.162 | 74 | 28 | 0 | 99 | 172 | 63 | 136 | 4.30e-28 | 109 |
| Msa0880440 | AT5G18830.3 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.33e-21 | 97.4 |
| Msa0880440 | AT5G18830.1 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.36e-21 | 97.4 |
| Msa0880440 | AT5G18830.2 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.39e-21 | 97.4 |
| Msa0880440 | AT2G47070.2 | 72.727 | 55 | 15 | 0 | 123 | 177 | 1 | 55 | 4.93e-21 | 95.9 |
| Msa0880440 | AT1G02065.2 | 41.837 | 98 | 49 | 3 | 57 | 146 | 138 | 235 | 9.94e-16 | 76.6 |
Find 120 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTCTATGTTGTTTA+AGG | 0.109263 | 6_1:+27037703 | None:intergenic |
| TTTAAACTAACCTTGGTAAT+TGG | 0.163177 | 6_1:+27036577 | None:intergenic |
| GGGGTCTGTGGACTCAGTTT+TGG | 0.232288 | 6_1:-27034748 | Msa0880440:CDS |
| ACAATTTCATCTTCATAATA+AGG | 0.257583 | 6_1:-27038517 | Msa0880440:intron |
| ACACATGATCATCCTGAAAA+TGG | 0.265481 | 6_1:-27034843 | Msa0880440:CDS |
| AAGATGAATGAAACTGAAAA+AGG | 0.280302 | 6_1:+27038616 | None:intergenic |
| GATCATCAGCAAACAAATTA+AGG | 0.283399 | 6_1:+27034560 | None:intergenic |
| TCTTCATCATCTTCAACTTC+AGG | 0.292841 | 6_1:-27037539 | Msa0880440:CDS |
| TTTCAATGGGATTAGATTAG+AGG | 0.294187 | 6_1:-27034624 | Msa0880440:exon |
| AGAAGATAATTGTCATAATA+AGG | 0.299682 | 6_1:+27038750 | None:intergenic |
| GGTAAATCCACCAACATCTT+TGG | 0.300549 | 6_1:+27037571 | None:intergenic |
| TCCCATTGAAAAGGAAATAA+TGG | 0.301322 | 6_1:+27034636 | None:intergenic |
| AAGCTACTACTTCGAGTAAT+AGG | 0.322521 | 6_1:+27036605 | None:intergenic |
| AATGAAGTTCACATACCTTA+TGG | 0.332097 | 6_1:+27037411 | None:intergenic |
| TTCATGGGATTTAACTGAAA+TGG | 0.342436 | 6_1:-27037735 | Msa0880440:CDS |
| AAGATGTTGTTCCAAGAAAA+AGG | 0.342659 | 6_1:+27035075 | None:intergenic |
| AGATGATGAAGATGTCATTT+TGG | 0.350943 | 6_1:+27037550 | None:intergenic |
| GGAAATTCTAGCACTGAATC+AGG | 0.359546 | 6_1:-27037605 | Msa0880440:CDS |
| GATGGTTCAATTAGGAGGTT+TGG | 0.365880 | 6_1:-27037680 | Msa0880440:CDS |
| AGTTTGCATGACCATAGCTT+GGG | 0.365920 | 6_1:-27034768 | Msa0880440:CDS |
| CTTGGGTTGGAGGAGATGTT+AGG | 0.371034 | 6_1:-27035151 | Msa0880440:CDS |
| AAACAATGGATGGTTCAATT+AGG | 0.371347 | 6_1:-27037688 | Msa0880440:CDS |
| TTGAGAAGCATCTTGTGTTA+TGG | 0.372893 | 6_1:-27037780 | Msa0880440:intron |
| GGGTTCATCATAGCAGTAGA+AGG | 0.377531 | 6_1:+27035176 | None:intergenic |
| CTGCTATGATGAACCCTACT+TGG | 0.380036 | 6_1:-27035169 | Msa0880440:CDS |
| CTACTTCGAGTAATAGGTTC+TGG | 0.389750 | 6_1:+27036611 | None:intergenic |
| TTTCCCTTCTTTGTAGCTGC+TGG | 0.392060 | 6_1:+27035049 | None:intergenic |
| TTGTTCCTCAATTTATAACT+TGG | 0.392942 | 6_1:-27034703 | Msa0880440:CDS |
| CATTATTATTCCCCTGAGAA+TGG | 0.393387 | 6_1:+27034667 | None:intergenic |
| TTCTAGTGAATCCCATTCTC+AGG | 0.405544 | 6_1:-27034679 | Msa0880440:CDS |
| TAAATTATTATTATATTACT+TGG | 0.408494 | 6_1:-27038663 | Msa0880440:five_prime_UTR |
| CAGTGGCTGCTGCTGTTGGC+TGG | 0.413457 | 6_1:+27035003 | None:intergenic |
| GTAATTTGAAAGCACCTTCA+TGG | 0.414407 | 6_1:-27037751 | Msa0880440:CDS |
| TTCACAGTGGCTGCTGCTGT+TGG | 0.415317 | 6_1:+27034999 | None:intergenic |
| AAAAGAACCTGCTACATTGC+TGG | 0.422583 | 6_1:+27037342 | None:intergenic |
| TGATCATGTGTTTGTGGTAC+TGG | 0.432050 | 6_1:+27034855 | None:intergenic |
| GTTGGTGTTGATTGTGGCTA+TGG | 0.432534 | 6_1:+27035126 | None:intergenic |
| TTTGGAGATTACAGAACAAA+AGG | 0.434418 | 6_1:-27037662 | Msa0880440:CDS |
| ATCGTTTAAGAAAATCATAT+TGG | 0.435628 | 6_1:-27034467 | Msa0880440:three_prime_UTR |
| CACTTTGTCTTAATGCATGA+AGG | 0.437853 | 6_1:-27034506 | Msa0880440:three_prime_UTR |
| CAACCAGATGGTGCATTTGT+TGG | 0.454409 | 6_1:+27035108 | None:intergenic |
| ATTATTATTCCCCTGAGAAT+GGG | 0.465602 | 6_1:+27034668 | None:intergenic |
| GAGTTTGCATGACCATAGCT+TGG | 0.466352 | 6_1:-27034769 | Msa0880440:CDS |
| CTAATCTAATCCCATTGAAA+AGG | 0.467134 | 6_1:+27034627 | None:intergenic |
| CCATGAGTCGCACGTTTAGC+AGG | 0.467652 | 6_1:-27034953 | Msa0880440:CDS |
| CTTCATCATCTTCAACTTCA+GGG | 0.469448 | 6_1:-27037538 | Msa0880440:CDS |
| AACTTGAGAATGGTAGCAAT+TGG | 0.470856 | 6_1:+27035210 | None:intergenic |
| AATTGTGACCTGTGCAGTCT+TGG | 0.471856 | 6_1:+27037388 | None:intergenic |
| CGAGTAATAGGTTCTGGTTG+TGG | 0.475165 | 6_1:+27036617 | None:intergenic |
| AAGACTGCACAGGTCACAAT+TGG | 0.475432 | 6_1:-27037386 | Msa0880440:CDS |
| GTCTTAATGCATGAAGGCAA+TGG | 0.485388 | 6_1:-27034500 | Msa0880440:three_prime_UTR |
| TGTTCCTCAATTTATAACTT+GGG | 0.485493 | 6_1:-27034702 | Msa0880440:CDS |
| ATGAACCCTACTTGGGTTGG+AGG | 0.486277 | 6_1:-27035161 | Msa0880440:CDS |
| ATGAAGGAAAGAGGAGCTGT+AGG | 0.487258 | 6_1:-27036676 | Msa0880440:CDS |
| GTAACTGTAGAGACTATCAT+AGG | 0.493095 | 6_1:-27037436 | Msa0880440:CDS |
| TGACCATAGCTTGGGGTCTG+TGG | 0.493672 | 6_1:-27034760 | Msa0880440:CDS |
| GTCATGCAAACTCAAGCCTA+AGG | 0.500554 | 6_1:+27034779 | None:intergenic |
| TCAGATAGTTTCATGTCTTG+TGG | 0.502100 | 6_1:-27037480 | Msa0880440:CDS |
| CCTGCTAAACGTGCGACTCA+TGG | 0.502871 | 6_1:+27034953 | None:intergenic |
| CAATGGATGGTTCAATTAGG+AGG | 0.503930 | 6_1:-27037685 | Msa0880440:CDS |
| TCAACCAGCAGCTACAAAGA+AGG | 0.503966 | 6_1:-27035053 | Msa0880440:CDS |
| ACTTGAGAATGGTAGCAATT+GGG | 0.507340 | 6_1:+27035211 | None:intergenic |
| GTGCGACTCATGGATGAAGC+TGG | 0.513016 | 6_1:+27034963 | None:intergenic |
| TAATTTGAAAGCACCTTCAT+GGG | 0.516062 | 6_1:-27037750 | Msa0880440:CDS |
| ACACCAACAAATGCACCATC+TGG | 0.516097 | 6_1:-27035111 | Msa0880440:CDS |
| ACATCTCCTCCAACCCAAGT+AGG | 0.516216 | 6_1:+27035155 | None:intergenic |
| TGAAAGTTGAAGCTAAAACT+TGG | 0.518290 | 6_1:+27038575 | None:intergenic |
| CTGTATATGTAGCTTGAGAA+AGG | 0.518416 | 6_1:+27038721 | None:intergenic |
| GAGCTAGAGCTATCAACAAT+GGG | 0.520984 | 6_1:-27037505 | Msa0880440:CDS |
| AGACTATCATAGGCGCCATA+AGG | 0.522041 | 6_1:-27037426 | Msa0880440:CDS |
| TCAGGATGATCATGTGTTTG+TGG | 0.524418 | 6_1:+27034849 | None:intergenic |
| GCATTTGTTGGTGTTGATTG+TGG | 0.524493 | 6_1:+27035120 | None:intergenic |
| GATGAAATTGTGGATTTGAA+AGG | 0.525997 | 6_1:+27038529 | None:intergenic |
| AGCTGTAGGAAACGCTTAGA+TGG | 0.526456 | 6_1:-27036662 | Msa0880440:CDS |
| ACTGCACAGGTCACAATTGG+TGG | 0.532124 | 6_1:-27037383 | Msa0880440:CDS |
| AGGAATTTGATGAAGGAAAG+AGG | 0.537908 | 6_1:-27036685 | Msa0880440:CDS |
| AGAACCCAAGTTATAAATTG+AGG | 0.540593 | 6_1:+27034698 | None:intergenic |
| GACAATCTTATAAGAAGAGG+AGG | 0.542569 | 6_1:+27034584 | None:intergenic |
| GGTTCTGCCAGCAATGTAGC+AGG | 0.542918 | 6_1:-27037349 | Msa0880440:intron |
| ATAATTGTCATAATAAGGAC+AGG | 0.547826 | 6_1:+27038755 | None:intergenic |
| ATAGTTTCATGTCTTGTGGA+TGG | 0.552133 | 6_1:-27037476 | Msa0880440:CDS |
| CATCTCCTCCAACCCAAGTA+GGG | 0.552239 | 6_1:+27035156 | None:intergenic |
| CTCATGGATGAAGCTGGAAG+AGG | 0.554579 | 6_1:+27034969 | None:intergenic |
| GATTTAACTGAAATGGATCA+AGG | 0.556449 | 6_1:-27037728 | Msa0880440:CDS |
| TATACATGTGAACTTGAGAA+TGG | 0.557360 | 6_1:+27035200 | None:intergenic |
| GCTCTAGAGGAATTTGATGA+AGG | 0.560175 | 6_1:-27036692 | Msa0880440:CDS |
| TCATAATAAGGACAGGCTGT+TGG | 0.561129 | 6_1:+27038762 | None:intergenic |
| ACAAAGTCCAAAGATGTTGG+TGG | 0.562124 | 6_1:-27037578 | Msa0880440:CDS |
| CATCAAATTCCTCTAGAGCA+TGG | 0.562487 | 6_1:+27036696 | None:intergenic |
| CTTAAACAACATAGAAACAA+TGG | 0.562677 | 6_1:-27037702 | Msa0880440:CDS |
| TTATTATGAAGATGAAATTG+TGG | 0.562818 | 6_1:+27038519 | None:intergenic |
| ATGATGAACCCTACTTGGGT+TGG | 0.564738 | 6_1:-27035164 | Msa0880440:CDS |
| ATTTCAGTTAAATCCCATGA+AGG | 0.568024 | 6_1:+27037737 | None:intergenic |
| CTTACAAAGTCCAAAGATGT+TGG | 0.572874 | 6_1:-27037581 | Msa0880440:CDS |
| CAACCAGCAGCTACAAAGAA+GGG | 0.573578 | 6_1:-27035052 | Msa0880440:CDS |
| TGCTATGATGAACCCTACTT+GGG | 0.579124 | 6_1:-27035168 | Msa0880440:CDS |
| GGTCTTGTTTATCAACCAGA+TGG | 0.579275 | 6_1:+27035096 | None:intergenic |
| GGTGACAATCTTATAAGAAG+AGG | 0.581109 | 6_1:+27034581 | None:intergenic |
| AGAGCTAGAGCTATCAACAA+TGG | 0.587150 | 6_1:-27037506 | Msa0880440:CDS |
| GAAATTCTAGCACTGAATCA+GGG | 0.589286 | 6_1:-27037604 | Msa0880440:CDS |
| AGTCCACAGACCCCAAGCTA+TGG | 0.589981 | 6_1:+27034757 | None:intergenic |
| GTTTGCATGACCATAGCTTG+GGG | 0.604245 | 6_1:-27034767 | Msa0880440:CDS |
| GATTTGAAGCTTGGCCATGT+TGG | 0.605175 | 6_1:-27037626 | Msa0880440:CDS |
| GTGTAGGTTCCATGCTCTAG+AGG | 0.610810 | 6_1:-27036705 | Msa0880440:intron |
| TCTAGTGAATCCCATTCTCA+GGG | 0.611691 | 6_1:-27034678 | Msa0880440:CDS |
| GATTTGAAAGGACAATTGTG+TGG | 0.618328 | 6_1:+27038541 | None:intergenic |
| GCTTAGATGGTCACAACCGA+CGG | 0.619901 | 6_1:-27036649 | Msa0880440:CDS |
| TCATGCAAACTCAAGCCTAA+GGG | 0.620270 | 6_1:+27034780 | None:intergenic |
| GTTGAAGCTAAAACTTGGAG+AGG | 0.621827 | 6_1:+27038580 | None:intergenic |
| GGTTCATCATAGCAGTAGAA+GGG | 0.627296 | 6_1:+27035177 | None:intergenic |
| TGAAAATGGATTGAATCAGA+TGG | 0.631963 | 6_1:-27034829 | Msa0880440:CDS |
| CAGTGCTAGAATTTCCAACA+TGG | 0.635549 | 6_1:+27037612 | None:intergenic |
| AACAACATAGAAACAATGGA+TGG | 0.636248 | 6_1:-27037698 | Msa0880440:CDS |
| ACTTCATTCCAAGACTGCAC+AGG | 0.639272 | 6_1:-27037396 | Msa0880440:CDS |
| CAATTGGTGGACATAAGCAA+AGG | 0.658162 | 6_1:-27037370 | Msa0880440:CDS |
| AAGCATCTTGTGTTATGGAG+TGG | 0.679671 | 6_1:-27037775 | Msa0880440:exon |
| TTGGGTTCAAATGATCAGAG+TGG | 0.682356 | 6_1:-27034729 | Msa0880440:CDS |
| AAGAGGTTGGTTGTTCACAG+TGG | 0.701313 | 6_1:+27034986 | None:intergenic |
| TGGATGAAGCTGGAAGAGGT+TGG | 0.704527 | 6_1:+27034973 | None:intergenic |
| CTAGTGAATCCCATTCTCAG+GGG | 0.746099 | 6_1:-27034677 | Msa0880440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATGTTATAAAAAAAAAAA+AGG | + | chr6_1:27035019-27035038 | None:intergenic | 10.0% |
| !! | TAAATTTCAAGATATAAAAT+AGG | + | chr6_1:27035252-27035271 | None:intergenic | 10.0% |
| !!! | TCTTTTTTACTAAAAATAGA+GGG | + | chr6_1:27034563-27034582 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTACTAAAAATAG+AGG | + | chr6_1:27034564-27034583 | None:intergenic | 15.0% |
| !! | TGTAAAACAAAATGTAAAAA+AGG | + | chr6_1:27034957-27034976 | None:intergenic | 15.0% |
| !!! | TTTAAAGTGATAATAAATAG+AGG | + | chr6_1:27035288-27035307 | None:intergenic | 15.0% |
| !! | AAATAAAGAGAAAATTATGA+AGG | + | chr6_1:27035437-27035456 | None:intergenic | 15.0% |
| !! | TAGATAAATATTTAGATCAA+AGG | + | chr6_1:27036408-27036427 | None:intergenic | 15.0% |
| !!! | ATCTAACATTTGAAATTTAA+GGG | + | chr6_1:27037563-27037582 | None:intergenic | 15.0% |
| !!! | TATCTAACATTTGAAATTTA+AGG | + | chr6_1:27037564-27037583 | None:intergenic | 15.0% |
| !! | AAATAACCATTTATAACTTA+AGG | - | chr6_1:27037753-27037772 | Msa0880440:CDS | 15.0% |
| !! | AATAACCATTTATAACTTAA+GGG | - | chr6_1:27037754-27037773 | Msa0880440:CDS | 15.0% |
| !! | AAATTTATGTATCTACAATT+GGG | + | chr6_1:27037994-27038013 | None:intergenic | 15.0% |
| !! | TAAATTTATGTATCTACAAT+TGG | + | chr6_1:27037995-27038014 | None:intergenic | 15.0% |
| !!! | CAACAATATATTTTTTTATC+AGG | - | chr6_1:27038015-27038034 | Msa0880440:intron | 15.0% |
| !! | AGAAGATAATTGTCATAATA+AGG | + | chr6_1:27034504-27034523 | None:intergenic | 20.0% |
| !! | TTATTATGAAGATGAAATTG+TGG | + | chr6_1:27034735-27034754 | None:intergenic | 20.0% |
| !! | ACAATTTCATCTTCATAATA+AGG | - | chr6_1:27034734-27034753 | Msa0880440:CDS | 20.0% |
| !!! | GATTTTATGTTATATAGAGA+AGG | + | chr6_1:27034785-27034804 | None:intergenic | 20.0% |
| !! | ACATAATTTAGAAGTTTACT+AGG | + | chr6_1:27036057-27036076 | None:intergenic | 20.0% |
| !!! | ATTAACAAGTGTTTTAGTAA+GGG | + | chr6_1:27036261-27036280 | None:intergenic | 20.0% |
| !!! | AATTAACAAGTGTTTTAGTA+AGG | + | chr6_1:27036262-27036281 | None:intergenic | 20.0% |
| !!! | CTAAAACACTTGTTAATTAA+TGG | - | chr6_1:27036264-27036283 | Msa0880440:intron | 20.0% |
| !!! | ATTTTATCTGATTTTGCATA+TGG | - | chr6_1:27036374-27036393 | Msa0880440:intron | 20.0% |
| !! | AAATGTACAAATACAATACA+AGG | + | chr6_1:27037123-27037142 | None:intergenic | 20.0% |
| !!! | GAAATATCACTTCTTTTTTT+GGG | + | chr6_1:27037225-27037244 | None:intergenic | 20.0% |
| !!! | AGAAATATCACTTCTTTTTT+TGG | + | chr6_1:27037226-27037245 | None:intergenic | 20.0% |
| !! | TTAATAAATTAAACCAAACC+AGG | - | chr6_1:27037274-27037293 | Msa0880440:intron | 20.0% |
| !! | CTCATATAAAGTAGTATATA+TGG | + | chr6_1:27037370-27037389 | None:intergenic | 20.0% |
| !! | ATTATTCATGATTGAAATTC+CGG | - | chr6_1:27037448-27037467 | Msa0880440:CDS | 20.0% |
| !! | AACATAAATAAGAGAATAAC+CGG | + | chr6_1:27037470-27037489 | None:intergenic | 20.0% |
| !! | TCCTTCTTGTTAAAATATAA+TGG | + | chr6_1:27037691-27037710 | None:intergenic | 20.0% |
| !! | ATAACCATTTATAACTTAAG+GGG | - | chr6_1:27037755-27037774 | Msa0880440:CDS | 20.0% |
| !! | GAGATCAAATAAAATGAAAA+AGG | - | chr6_1:27037824-27037843 | Msa0880440:intron | 20.0% |
| !!! | GTTTCTTTTTTAATCATGTT+GGG | + | chr6_1:27037856-27037875 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTTTAATCATGT+TGG | + | chr6_1:27037857-27037876 | None:intergenic | 20.0% |
| !! | ATGATTAAAAAAGAAACTTG+AGG | - | chr6_1:27037859-27037878 | Msa0880440:intron | 20.0% |
| !! | TGATTAAAAAAGAAACTTGA+GGG | - | chr6_1:27037860-27037879 | Msa0880440:intron | 20.0% |
| !! | CTTTATCAGTATTAATGATT+TGG | - | chr6_1:27037931-27037950 | Msa0880440:intron | 20.0% |
| !!! | ATTTTGTATCTTTCTGAAAA+AGG | + | chr6_1:27038330-27038349 | None:intergenic | 20.0% |
| !!! | AATATGATTTTCTTAAACGA+TGG | + | chr6_1:27038785-27038804 | None:intergenic | 20.0% |
| !! | ATCGTTTAAGAAAATCATAT+TGG | - | chr6_1:27038784-27038803 | Msa0880440:five_prime_UTR | 20.0% |
| ! | ATAATTGTCATAATAAGGAC+AGG | + | chr6_1:27034499-27034518 | None:intergenic | 25.0% |
| ! | AGATGAATGAAACTGAAAAA+GGG | + | chr6_1:27034637-27034656 | None:intergenic | 25.0% |
| ! | AAGATGAATGAAACTGAAAA+AGG | + | chr6_1:27034638-27034657 | None:intergenic | 25.0% |
| ! | TTTCATCTTCATAATAAGGT+AGG | - | chr6_1:27034738-27034757 | Msa0880440:CDS | 25.0% |
| ! | TTCATCTTCATAATAAGGTA+GGG | - | chr6_1:27034739-27034758 | Msa0880440:CDS | 25.0% |
| ! | CTGAAAGTTACAAATTAAGA+GGG | + | chr6_1:27035067-27035086 | None:intergenic | 25.0% |
| ! | ACTGAAAGTTACAAATTAAG+AGG | + | chr6_1:27035068-27035087 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTTAGCACTCTT+TGG | - | chr6_1:27035144-27035163 | Msa0880440:CDS | 25.0% |
| ! | TATGCAAACATAATAGACAT+TGG | + | chr6_1:27035222-27035241 | None:intergenic | 25.0% |
| ! | AATGTCTATTATGTTTGCAT+AGG | - | chr6_1:27035221-27035240 | Msa0880440:intron | 25.0% |
| ! | AGAGAAATTAACAACAACAT+TGG | + | chr6_1:27035331-27035350 | None:intergenic | 25.0% |
| !!! | CATTGTTTCTATGTTGTTTA+AGG | + | chr6_1:27035551-27035570 | None:intergenic | 25.0% |
| ! | CTTAAACAACATAGAAACAA+TGG | - | chr6_1:27035549-27035568 | Msa0880440:intron | 25.0% |
| ! | ATGAAGTTAGCATGAATAAT+GGG | + | chr6_1:27036089-27036108 | None:intergenic | 25.0% |
| ! | TATGAAGTTAGCATGAATAA+TGG | + | chr6_1:27036090-27036109 | None:intergenic | 25.0% |
| !!! | TTGAGATTCCTTTTTTGTTA+AGG | + | chr6_1:27036188-27036207 | None:intergenic | 25.0% |
| ! | TCTACTAGTAAGATTTAGAT+GGG | + | chr6_1:27036461-27036480 | None:intergenic | 25.0% |
| ! | ATCTACTAGTAAGATTTAGA+TGG | + | chr6_1:27036462-27036481 | None:intergenic | 25.0% |
| !!! | AGTAGATTCTGAAATTAAAG+TGG | - | chr6_1:27036475-27036494 | Msa0880440:intron | 25.0% |
| !! | TTTAAACTAACCTTGGTAAT+TGG | + | chr6_1:27036677-27036696 | None:intergenic | 25.0% |
| ! | CTATAACTTTAAACTAACCT+TGG | + | chr6_1:27036684-27036703 | None:intergenic | 25.0% |
| ! | TCCAAATCTAGACAATTATT+GGG | + | chr6_1:27036732-27036751 | None:intergenic | 25.0% |
| ! | CAAAAATTACATAATGCACT+TGG | - | chr6_1:27036813-27036832 | Msa0880440:intron | 25.0% |
| !!! | CATGTTTGTTGTTTTAGTAA+TGG | + | chr6_1:27036933-27036952 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGCATCATT+CGG | - | chr6_1:27037068-27037087 | Msa0880440:intron | 25.0% |
| ! | CAAACGAAAAATAGACAAAA+GGG | + | chr6_1:27037644-27037663 | None:intergenic | 25.0% |
| ! | TCAAACGAAAAATAGACAAA+AGG | + | chr6_1:27037645-27037664 | None:intergenic | 25.0% |
| ! | GTTAAAATATAATGGCACAT+AGG | + | chr6_1:27037683-27037702 | None:intergenic | 25.0% |
| !!! | GCCATTATATTTTAACAAGA+AGG | - | chr6_1:27037687-27037706 | Msa0880440:CDS | 25.0% |
| !! | TTTTAACAAGAAGGAAAAGA+AGG | - | chr6_1:27037696-27037715 | Msa0880440:CDS | 25.0% |
| ! | TAACCATTTATAACTTAAGG+GGG | - | chr6_1:27037756-27037775 | Msa0880440:CDS | 25.0% |
| !!! | GTTTTGTTTTCGTTATGAAA+AGG | - | chr6_1:27037955-27037974 | Msa0880440:intron | 25.0% |
| ! | TTGTTCCTCAATTTATAACT+TGG | - | chr6_1:27038548-27038567 | Msa0880440:five_prime_UTR | 25.0% |
| ! | TGTTCCTCAATTTATAACTT+GGG | - | chr6_1:27038549-27038568 | Msa0880440:five_prime_UTR | 25.0% |
| !! | TCCATTATTTCCTTTTCAAT+GGG | - | chr6_1:27038614-27038633 | Msa0880440:five_prime_UTR | 25.0% |
| TGAAAGTTGAAGCTAAAACT+TGG | + | chr6_1:27034679-27034698 | None:intergenic | 30.0% | |
| GATGAAATTGTGGATTTGAA+AGG | + | chr6_1:27034725-27034744 | None:intergenic | 30.0% | |
| AAAAAAAAAGGCAGAAAGAG+AGG | + | chr6_1:27034807-27034826 | None:intergenic | 30.0% | |
| !! | AGCTCTTTAATTTGACTATC+TGG | - | chr6_1:27034885-27034904 | Msa0880440:CDS | 30.0% |
| TGAAAGATGAAGAAGTAAAC+AGG | + | chr6_1:27034921-27034940 | None:intergenic | 30.0% | |
| TTTGTAACTTTCAGTTTCCT+TGG | - | chr6_1:27035073-27035092 | Msa0880440:CDS | 30.0% | |
| ! | ACTCTCTCTTTTCCTTAATA+AGG | - | chr6_1:27035191-27035210 | Msa0880440:CDS | 30.0% |
| !! | ACATTGGTTTGTCCTTATTA+AGG | + | chr6_1:27035206-27035225 | None:intergenic | 30.0% |
| AACTAGACACTTGCAAAAAT+AGG | + | chr6_1:27035403-27035422 | None:intergenic | 30.0% | |
| !! | TAATTTGAAAGCACCTTCAT+GGG | - | chr6_1:27035501-27035520 | Msa0880440:intron | 30.0% |
| ATTTCAGTTAAATCCCATGA+AGG | + | chr6_1:27035517-27035536 | None:intergenic | 30.0% | |
| TTCATGGGATTTAACTGAAA+TGG | - | chr6_1:27035516-27035535 | Msa0880440:intron | 30.0% | |
| GATTTAACTGAAATGGATCA+AGG | - | chr6_1:27035523-27035542 | Msa0880440:intron | 30.0% | |
| AACAACATAGAAACAATGGA+TGG | - | chr6_1:27035553-27035572 | Msa0880440:intron | 30.0% | |
| AAACAATGGATGGTTCAATT+AGG | - | chr6_1:27035563-27035582 | Msa0880440:intron | 30.0% | |
| TTTGGAGATTACAGAACAAA+AGG | - | chr6_1:27035589-27035608 | Msa0880440:intron | 30.0% | |
| !!! | TTTTCTGTTGATTTGAAGCT+TGG | - | chr6_1:27035616-27035635 | Msa0880440:intron | 30.0% |
| !! | AGATGATGAAGATGTCATTT+TGG | + | chr6_1:27035704-27035723 | None:intergenic | 30.0% |
| AATGAAGTTCACATACCTTA+TGG | + | chr6_1:27035843-27035862 | None:intergenic | 30.0% | |
| ! | AATTTAGCCTTCATTAGAAG+AGG | - | chr6_1:27036150-27036169 | Msa0880440:intron | 30.0% |
| AGCACAATCCTTAACAAAAA+AGG | - | chr6_1:27036177-27036196 | Msa0880440:intron | 30.0% | |
| TTGGTTATAAATTCTCAACG+AGG | - | chr6_1:27036343-27036362 | Msa0880440:intron | 30.0% | |
| CTACTAGTAAGATTTAGATG+GGG | + | chr6_1:27036460-27036479 | None:intergenic | 30.0% | |
| TGGTGAAAATGATATTCTCT+AGG | - | chr6_1:27036495-27036514 | Msa0880440:intron | 30.0% | |
| TTCTCTAGGTTCATTTATGA+AGG | - | chr6_1:27036509-27036528 | Msa0880440:intron | 30.0% | |
| TAGCTAACATATTATCTGAG+TGG | - | chr6_1:27036705-27036724 | Msa0880440:intron | 30.0% | |
| ACCCAATAATTGTCTAGATT+TGG | - | chr6_1:27036728-27036747 | Msa0880440:intron | 30.0% | |
| CTCCAAATCTAGACAATTAT+TGG | + | chr6_1:27036733-27036752 | None:intergenic | 30.0% | |
| TAAGATGTTTGTACCTATGT+GGG | + | chr6_1:27036775-27036794 | None:intergenic | 30.0% | |
| TTAAGATGTTTGTACCTATG+TGG | + | chr6_1:27036776-27036795 | None:intergenic | 30.0% | |
| TCATAAACATGGCAAATAAG+TGG | + | chr6_1:27036899-27036918 | None:intergenic | 30.0% | |
| TTTGACTGTGTGTAGTTAAT+TGG | - | chr6_1:27037153-27037172 | Msa0880440:intron | 30.0% | |
| ATAGTGCAGTAGTTATCTAT+AGG | - | chr6_1:27037497-27037516 | Msa0880440:CDS | 30.0% | |
| TATACATGTGAACTTGAGAA+TGG | + | chr6_1:27038054-27038073 | None:intergenic | 30.0% | |
| ! | GATAAACAAGACCTTTTTCT+TGG | - | chr6_1:27038165-27038184 | Msa0880440:intron | 30.0% |
| AAGATGTTGTTCCAAGAAAA+AGG | + | chr6_1:27038179-27038198 | None:intergenic | 30.0% | |
| ! | GTATCTTTCTGAAAAAGGAT+TGG | + | chr6_1:27038325-27038344 | None:intergenic | 30.0% |
| ! | ATCTGATTCAATCCATTTTC+AGG | + | chr6_1:27038423-27038442 | None:intergenic | 30.0% |
| !! | TGAAAATGGATTGAATCAGA+TGG | - | chr6_1:27038422-27038441 | Msa0880440:intron | 30.0% |
| AGAACCCAAGTTATAAATTG+AGG | + | chr6_1:27038556-27038575 | None:intergenic | 30.0% | |
| ATTATTATTCCCCTGAGAAT+GGG | + | chr6_1:27038586-27038605 | None:intergenic | 30.0% | |
| ! | CTCCATTATTTCCTTTTCAA+TGG | - | chr6_1:27038613-27038632 | Msa0880440:five_prime_UTR | 30.0% |
| TCCCATTGAAAAGGAAATAA+TGG | + | chr6_1:27038618-27038637 | None:intergenic | 30.0% | |
| CTAATCTAATCCCATTGAAA+AGG | + | chr6_1:27038627-27038646 | None:intergenic | 30.0% | |
| TTTCAATGGGATTAGATTAG+AGG | - | chr6_1:27038627-27038646 | Msa0880440:five_prime_UTR | 30.0% | |
| GATCATCAGCAAACAAATTA+AGG | + | chr6_1:27038694-27038713 | None:intergenic | 30.0% | |
| CTGTATATGTAGCTTGAGAA+AGG | + | chr6_1:27034533-27034552 | None:intergenic | 35.0% | |
| GATTTGAAAGGACAATTGTG+TGG | + | chr6_1:27034713-27034732 | None:intergenic | 35.0% | |
| ATTGGCACTTTAATTGAGCA+AGG | + | chr6_1:27035313-27035332 | None:intergenic | 35.0% | |
| !! | TTGAGAAGCATCTTGTGTTA+TGG | - | chr6_1:27035471-27035490 | Msa0880440:intron | 35.0% |
| !! | GTAATTTGAAAGCACCTTCA+TGG | - | chr6_1:27035500-27035519 | Msa0880440:intron | 35.0% |
| ! | GAAATTCTAGCACTGAATCA+GGG | - | chr6_1:27035647-27035666 | Msa0880440:intron | 35.0% |
| CTTACAAAGTCCAAAGATGT+TGG | - | chr6_1:27035670-27035689 | Msa0880440:intron | 35.0% | |
| TCTTCATCATCTTCAACTTC+AGG | - | chr6_1:27035712-27035731 | Msa0880440:intron | 35.0% | |
| CTTCATCATCTTCAACTTCA+GGG | - | chr6_1:27035713-27035732 | Msa0880440:intron | 35.0% | |
| TCAGATAGTTTCATGTCTTG+TGG | - | chr6_1:27035771-27035790 | Msa0880440:intron | 35.0% | |
| ATAGTTTCATGTCTTGTGGA+TGG | - | chr6_1:27035775-27035794 | Msa0880440:intron | 35.0% | |
| GTAACTGTAGAGACTATCAT+AGG | - | chr6_1:27035815-27035834 | Msa0880440:intron | 35.0% | |
| TGACAAAGCATAACACACAA+GGG | + | chr6_1:27035962-27035981 | None:intergenic | 35.0% | |
| ATGACAAAGCATAACACACA+AGG | + | chr6_1:27035963-27035982 | None:intergenic | 35.0% | |
| !! | ATACACACATGTTGGTAACT+TGG | - | chr6_1:27036324-27036343 | Msa0880440:intron | 35.0% |
| GGAAGTTTCCTTAATTGTGT+AGG | - | chr6_1:27036530-27036549 | Msa0880440:intron | 35.0% | |
| AGGAATTTGATGAAGGAAAG+AGG | - | chr6_1:27036566-27036585 | Msa0880440:intron | 35.0% | |
| AAGCTACTACTTCGAGTAAT+AGG | + | chr6_1:27036649-27036668 | None:intergenic | 35.0% | |
| ! | AGCTTTTTGTCCAATTACCA+AGG | - | chr6_1:27036664-27036683 | Msa0880440:CDS | 35.0% |
| AAGATGTTTGTACCTATGTG+GGG | + | chr6_1:27036774-27036793 | None:intergenic | 35.0% | |
| AATTACATAATGCACTTGGC+TGG | - | chr6_1:27036817-27036836 | Msa0880440:intron | 35.0% | |
| CAAATAAGTGGACCAAATCA+AGG | + | chr6_1:27036887-27036906 | None:intergenic | 35.0% | |
| CCACTAGATTGTCATAAACA+TGG | + | chr6_1:27036910-27036929 | None:intergenic | 35.0% | |
| CCATGTTTATGACAATCTAG+TGG | - | chr6_1:27036907-27036926 | Msa0880440:intron | 35.0% | |
| !! | ACTTTTCAGCTTTTGAGTGA+GGG | - | chr6_1:27036985-27037004 | Msa0880440:intron | 35.0% |
| ! | GTTATCTATAGGTTTTGCTC+TGG | - | chr6_1:27037508-27037527 | Msa0880440:CDS | 35.0% |
| AATGGCACATAGGAAACATT+TGG | + | chr6_1:27037673-27037692 | None:intergenic | 35.0% | |
| TTGCCCCCTTAAGTTATAAA+TGG | + | chr6_1:27037762-27037781 | None:intergenic | 35.0% | |
| CTACAATTGGGTATACATGA+AGG | + | chr6_1:27037982-27038001 | None:intergenic | 35.0% | |
| ACTTGAGAATGGTAGCAATT+GGG | + | chr6_1:27038043-27038062 | None:intergenic | 35.0% | |
| AACTTGAGAATGGTAGCAAT+TGG | + | chr6_1:27038044-27038063 | None:intergenic | 35.0% | |
| ACACATGATCATCCTGAAAA+TGG | - | chr6_1:27038408-27038427 | Msa0880440:intron | 35.0% | |
| ! | TCATCTTTTATGCAACCCTT+AGG | - | chr6_1:27038456-27038475 | Msa0880440:intron | 35.0% |
| CATTATTATTCCCCTGAGAA+TGG | + | chr6_1:27038587-27038606 | None:intergenic | 35.0% | |
| GACAATCTTATAAGAAGAGG+AGG | + | chr6_1:27038670-27038689 | None:intergenic | 35.0% | |
| GGTGACAATCTTATAAGAAG+AGG | + | chr6_1:27038673-27038692 | None:intergenic | 35.0% | |
| CACTTTGTCTTAATGCATGA+AGG | - | chr6_1:27038745-27038764 | Msa0880440:five_prime_UTR | 35.0% | |
| TCATAATAAGGACAGGCTGT+TGG | + | chr6_1:27034492-27034511 | None:intergenic | 40.0% | |
| GTTGAAGCTAAAACTTGGAG+AGG | + | chr6_1:27034674-27034693 | None:intergenic | 40.0% | |
| !! | TTTTTAGCACTCTTTGGTGC+AGG | - | chr6_1:27035150-27035169 | Msa0880440:CDS | 40.0% |
| AAGCATCTTGTGTTATGGAG+TGG | - | chr6_1:27035476-27035495 | Msa0880440:intron | 40.0% | |
| CAATGGATGGTTCAATTAGG+AGG | - | chr6_1:27035566-27035585 | Msa0880440:intron | 40.0% | |
| GATGGTTCAATTAGGAGGTT+TGG | - | chr6_1:27035571-27035590 | Msa0880440:intron | 40.0% | |
| CAGTGCTAGAATTTCCAACA+TGG | + | chr6_1:27035642-27035661 | None:intergenic | 40.0% | |
| ! | GGAAATTCTAGCACTGAATC+AGG | - | chr6_1:27035646-27035665 | Msa0880440:intron | 40.0% |
| ACAAAGTCCAAAGATGTTGG+TGG | - | chr6_1:27035673-27035692 | Msa0880440:intron | 40.0% | |
| GGTAAATCCACCAACATCTT+TGG | + | chr6_1:27035683-27035702 | None:intergenic | 40.0% | |
| AGAGCTAGAGCTATCAACAA+TGG | - | chr6_1:27035745-27035764 | Msa0880440:intron | 40.0% | |
| GAGCTAGAGCTATCAACAAT+GGG | - | chr6_1:27035746-27035765 | Msa0880440:intron | 40.0% | |
| ! | CAATTGGTGGACATAAGCAA+AGG | - | chr6_1:27035881-27035900 | Msa0880440:intron | 40.0% |
| AAAAGAACCTGCTACATTGC+TGG | + | chr6_1:27035912-27035931 | None:intergenic | 40.0% | |
| GGGGAAACACAAAAAGCTTA+TGG | + | chr6_1:27035942-27035961 | None:intergenic | 40.0% | |
| GACAAAGCATAACACACAAG+GGG | + | chr6_1:27035961-27035980 | None:intergenic | 40.0% | |
| GCTTCTACCTCTTCTAATGA+AGG | + | chr6_1:27036160-27036179 | None:intergenic | 40.0% | |
| GTCAACACATACACACATGT+TGG | - | chr6_1:27036316-27036335 | Msa0880440:intron | 40.0% | |
| GCATGGAACCTACACAATTA+AGG | + | chr6_1:27036541-27036560 | None:intergenic | 40.0% | |
| !! | CATCAAATTCCTCTAGAGCA+TGG | + | chr6_1:27036558-27036577 | None:intergenic | 40.0% |
| !! | GCTCTAGAGGAATTTGATGA+AGG | - | chr6_1:27036559-27036578 | Msa0880440:intron | 40.0% |
| CTACTTCGAGTAATAGGTTC+TGG | + | chr6_1:27036643-27036662 | None:intergenic | 40.0% | |
| TAAGTGGACCAAATCAAGGA+TGG | + | chr6_1:27036883-27036902 | None:intergenic | 40.0% | |
| !! | GACTTTTCAGCTTTTGAGTG+AGG | - | chr6_1:27036984-27037003 | Msa0880440:intron | 40.0% |
| GGTTCATCATAGCAGTAGAA+GGG | + | chr6_1:27038077-27038096 | None:intergenic | 40.0% | |
| TGCTATGATGAACCCTACTT+GGG | - | chr6_1:27038083-27038102 | Msa0880440:intron | 40.0% | |
| !! | GCATTTGTTGGTGTTGATTG+TGG | + | chr6_1:27038134-27038153 | None:intergenic | 40.0% |
| !! | GGTCTTGTTTATCAACCAGA+TGG | + | chr6_1:27038158-27038177 | None:intergenic | 40.0% |
| TGATCATGTGTTTGTGGTAC+TGG | + | chr6_1:27038399-27038418 | None:intergenic | 40.0% | |
| TCAGGATGATCATGTGTTTG+TGG | + | chr6_1:27038405-27038424 | None:intergenic | 40.0% | |
| TCATGCAAACTCAAGCCTAA+GGG | + | chr6_1:27038474-27038493 | None:intergenic | 40.0% | |
| AGTTTGCATGACCATAGCTT+GGG | - | chr6_1:27038483-27038502 | Msa0880440:intron | 40.0% | |
| TTGGGTTCAAATGATCAGAG+TGG | - | chr6_1:27038522-27038541 | Msa0880440:five_prime_UTR | 40.0% | |
| TTCTAGTGAATCCCATTCTC+AGG | - | chr6_1:27038572-27038591 | Msa0880440:five_prime_UTR | 40.0% | |
| TCTAGTGAATCCCATTCTCA+GGG | - | chr6_1:27038573-27038592 | Msa0880440:five_prime_UTR | 40.0% | |
| GTCTTAATGCATGAAGGCAA+TGG | - | chr6_1:27038751-27038770 | Msa0880440:five_prime_UTR | 40.0% | |
| ! | GATTTGAAGCTTGGCCATGT+TGG | - | chr6_1:27035625-27035644 | Msa0880440:intron | 45.0% |
| AGACTATCATAGGCGCCATA+AGG | - | chr6_1:27035825-27035844 | Msa0880440:intron | 45.0% | |
| ACTTCATTCCAAGACTGCAC+AGG | - | chr6_1:27035855-27035874 | Msa0880440:intron | 45.0% | |
| AATTGTGACCTGTGCAGTCT+TGG | + | chr6_1:27035866-27035885 | None:intergenic | 45.0% | |
| AAGACTGCACAGGTCACAAT+TGG | - | chr6_1:27035865-27035884 | Msa0880440:intron | 45.0% | |
| ATGAAGGAAAGAGGAGCTGT+AGG | - | chr6_1:27036575-27036594 | Msa0880440:intron | 45.0% | |
| AGCTGTAGGAAACGCTTAGA+TGG | - | chr6_1:27036589-27036608 | Msa0880440:CDS | 45.0% | |
| ! | GTTGTGGTTTTCTTCTCCGT+CGG | + | chr6_1:27036621-27036640 | None:intergenic | 45.0% |
| ! | CGAGTAATAGGTTCTGGTTG+TGG | + | chr6_1:27036637-27036656 | None:intergenic | 45.0% |
| ! | TTTGGAGCAGACAATTGCTG+AGG | - | chr6_1:27036746-27036765 | Msa0880440:intron | 45.0% |
| TGGACCAAATCAAGGATGGT+GGG | + | chr6_1:27036879-27036898 | None:intergenic | 45.0% | |
| GGGTTCATCATAGCAGTAGA+AGG | + | chr6_1:27038078-27038097 | None:intergenic | 45.0% | |
| CTGCTATGATGAACCCTACT+TGG | - | chr6_1:27038082-27038101 | Msa0880440:intron | 45.0% | |
| ATGATGAACCCTACTTGGGT+TGG | - | chr6_1:27038087-27038106 | Msa0880440:intron | 45.0% | |
| !! | GTTGGTGTTGATTGTGGCTA+TGG | + | chr6_1:27038128-27038147 | None:intergenic | 45.0% |
| ACACCAACAAATGCACCATC+TGG | - | chr6_1:27038140-27038159 | Msa0880440:intron | 45.0% | |
| CAACCAGATGGTGCATTTGT+TGG | + | chr6_1:27038146-27038165 | None:intergenic | 45.0% | |
| TCAACCAGCAGCTACAAAGA+AGG | - | chr6_1:27038198-27038217 | Msa0880440:intron | 45.0% | |
| CAACCAGCAGCTACAAAGAA+GGG | - | chr6_1:27038199-27038218 | Msa0880440:intron | 45.0% | |
| TTTCCCTTCTTTGTAGCTGC+TGG | + | chr6_1:27038205-27038224 | None:intergenic | 45.0% | |
| ! | AAGAGGTTGGTTGTTCACAG+TGG | + | chr6_1:27038268-27038287 | None:intergenic | 45.0% |
| GTCATGCAAACTCAAGCCTA+AGG | + | chr6_1:27038475-27038494 | None:intergenic | 45.0% | |
| GAGTTTGCATGACCATAGCT+TGG | - | chr6_1:27038482-27038501 | Msa0880440:intron | 45.0% | |
| GTTTGCATGACCATAGCTTG+GGG | - | chr6_1:27038484-27038503 | Msa0880440:intron | 45.0% | |
| CTAGTGAATCCCATTCTCAG+GGG | - | chr6_1:27038574-27038593 | Msa0880440:five_prime_UTR | 45.0% | |
| !! | TAAATTATTATTATATTACT+TGG | - | chr6_1:27034588-27034607 | Msa0880440:three_prime_UTR | 5.0% |
| !! | AAAATAAAACAAAAAAAAAA+AGG | + | chr6_1:27034819-27034838 | None:intergenic | 5.0% |
| TCCTTGGAACTCTCTCAGCT+TGG | - | chr6_1:27035089-27035108 | Msa0880440:CDS | 50.0% | |
| ACTGCACAGGTCACAATTGG+TGG | - | chr6_1:27035868-27035887 | Msa0880440:intron | 50.0% | |
| GTGTAGGTTCCATGCTCTAG+AGG | - | chr6_1:27036546-27036565 | Msa0880440:intron | 50.0% | |
| GCTTAGATGGTCACAACCGA+CGG | - | chr6_1:27036602-27036621 | Msa0880440:CDS | 50.0% | |
| ATTGCTGAGGATCCCCACAT+AGG | - | chr6_1:27036759-27036778 | Msa0880440:intron | 50.0% | |
| ACATAATGCACTTGGCTGGC+TGG | - | chr6_1:27036821-27036840 | Msa0880440:intron | 50.0% | |
| GTGGACCAAATCAAGGATGG+TGG | + | chr6_1:27036880-27036899 | None:intergenic | 50.0% | |
| ACTAGACACGACACCTGGTT+TGG | + | chr6_1:27037290-27037309 | None:intergenic | 50.0% | |
| TAGACACTAGACACGACACC+TGG | + | chr6_1:27037295-27037314 | None:intergenic | 50.0% | |
| !! | ATGAACCCTACTTGGGTTGG+AGG | - | chr6_1:27038090-27038109 | Msa0880440:intron | 50.0% |
| CATCTCCTCCAACCCAAGTA+GGG | + | chr6_1:27038098-27038117 | None:intergenic | 50.0% | |
| ACATCTCCTCCAACCCAAGT+AGG | + | chr6_1:27038099-27038118 | None:intergenic | 50.0% | |
| !! | CTTGGGTTGGAGGAGATGTT+AGG | - | chr6_1:27038100-27038119 | Msa0880440:intron | 50.0% |
| TGGATGAAGCTGGAAGAGGT+TGG | + | chr6_1:27038281-27038300 | None:intergenic | 50.0% | |
| CTCATGGATGAAGCTGGAAG+AGG | + | chr6_1:27038285-27038304 | None:intergenic | 50.0% | |
| ! | GGGTCTGTGGACTCAGTTTT+GGG | - | chr6_1:27038504-27038523 | Msa0880440:intron | 50.0% |
| GCCAAGCTGAGAGAGTTCCA+AGG | + | chr6_1:27035093-27035112 | None:intergenic | 55.0% | |
| GGTTCTGCCAGCAATGTAGC+AGG | - | chr6_1:27035902-27035921 | Msa0880440:intron | 55.0% | |
| !! | ATCAAGGATGGTGGGCAGCA+TGG | + | chr6_1:27036871-27036890 | None:intergenic | 55.0% |
| GCTGCCCACCATCCTTGATT+TGG | - | chr6_1:27036872-27036891 | Msa0880440:intron | 55.0% | |
| TTCACAGTGGCTGCTGCTGT+TGG | + | chr6_1:27038255-27038274 | None:intergenic | 55.0% | |
| GTGCGACTCATGGATGAAGC+TGG | + | chr6_1:27038291-27038310 | None:intergenic | 55.0% | |
| CCTGCTAAACGTGCGACTCA+TGG | + | chr6_1:27038301-27038320 | None:intergenic | 55.0% | |
| CCATGAGTCGCACGTTTAGC+AGG | - | chr6_1:27038298-27038317 | Msa0880440:intron | 55.0% | |
| TGACCATAGCTTGGGGTCTG+TGG | - | chr6_1:27038491-27038510 | Msa0880440:intron | 55.0% | |
| AGTCCACAGACCCCAAGCTA+TGG | + | chr6_1:27038497-27038516 | None:intergenic | 55.0% | |
| ! | GGGGTCTGTGGACTCAGTTT+TGG | - | chr6_1:27038503-27038522 | Msa0880440:intron | 55.0% |
| ! | AATGCACTTGGCTGGCTGGC+TGG | - | chr6_1:27036825-27036844 | Msa0880440:intron | 60.0% |
| GGTGGGCAGCATGGTGAGTG+AGG | + | chr6_1:27036862-27036881 | None:intergenic | 65.0% | |
| CAGTGGCTGCTGCTGTTGGC+TGG | + | chr6_1:27038251-27038270 | None:intergenic | 65.0% | |
| ! | CACTTGGCTGGCTGGCTGGC+TGG | - | chr6_1:27036829-27036848 | Msa0880440:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 27034466 | 27038807 | 27034466 | ID=Msa0880440;Name=Msa0880440 |
| chr6_1 | mRNA | 27034466 | 27038807 | 27034466 | ID=Msa0880440-mRNA-1;Parent=Msa0880440;Name=Msa0880440-mRNA-1;_AED=0.16;_eAED=0.16;_QI=301|1|1|1|0.66|0.5|4|166|390 |
| chr6_1 | exon | 27034466 | 27035236 | 27034466 | ID=Msa0880440-mRNA-1:exon:6624;Parent=Msa0880440-mRNA-1 |
| chr6_1 | exon | 27036588 | 27036721 | 27036588 | ID=Msa0880440-mRNA-1:exon:6623;Parent=Msa0880440-mRNA-1 |
| chr6_1 | exon | 27037350 | 27037794 | 27037350 | ID=Msa0880440-mRNA-1:exon:6622;Parent=Msa0880440-mRNA-1 |
| chr6_1 | exon | 27038518 | 27038807 | 27038518 | ID=Msa0880440-mRNA-1:exon:6621;Parent=Msa0880440-mRNA-1 |
| chr6_1 | five_prime_UTR | 27038518 | 27038807 | 27038518 | ID=Msa0880440-mRNA-1:five_prime_utr;Parent=Msa0880440-mRNA-1 |
| chr6_1 | five_prime_UTR | 27037784 | 27037794 | 27037784 | ID=Msa0880440-mRNA-1:five_prime_utr;Parent=Msa0880440-mRNA-1 |
| chr6_1 | CDS | 27037350 | 27037783 | 27037350 | ID=Msa0880440-mRNA-1:cds;Parent=Msa0880440-mRNA-1 |
| chr6_1 | CDS | 27036588 | 27036721 | 27036588 | ID=Msa0880440-mRNA-1:cds;Parent=Msa0880440-mRNA-1 |
| chr6_1 | CDS | 27034632 | 27035236 | 27034632 | ID=Msa0880440-mRNA-1:cds;Parent=Msa0880440-mRNA-1 |
| chr6_1 | three_prime_UTR | 27034466 | 27034631 | 27034466 | ID=Msa0880440-mRNA-1:three_prime_utr;Parent=Msa0880440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
