Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001273.t1 | XP_003591273.1 | 90.7 | 740 | 60 | 1 | 3 | 742 | 5 | 735 | 0.00E+00 | 1346.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001273.t1 | O82462 | 70.6 | 737 | 195 | 6 | 1 | 736 | 1 | 716 | 1.4e-309 | 1063.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001273.t1 | G7IAE3 | 90.7 | 740 | 60 | 1 | 3 | 742 | 5 | 735 | 0.0e+00 | 1346.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001273.t1 | MTR_1g085150 | 90.431 | 742 | 62 | 1 | 1 | 742 | 3 | 735 | 0.0 | 1382 |
| MS.gene001273.t1 | MTR_1g110430 | 33.776 | 527 | 291 | 10 | 223 | 717 | 269 | 769 | 3.75e-70 | 245 |
| MS.gene001273.t1 | MTR_8g009900 | 27.778 | 252 | 140 | 9 | 225 | 455 | 55 | 285 | 2.86e-14 | 76.6 |
| MS.gene001273.t1 | MTR_8g009900 | 28.251 | 223 | 129 | 7 | 225 | 426 | 55 | 267 | 4.84e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001273.t1 | AT5G26710 | 70.556 | 737 | 195 | 6 | 1 | 736 | 1 | 716 | 0.0 | 1090 |
| MS.gene001273.t1 | AT1G25350 | 32.638 | 527 | 298 | 12 | 223 | 717 | 269 | 770 | 4.31e-69 | 242 |
| MS.gene001273.t1 | AT1G25350 | 30.827 | 532 | 306 | 13 | 223 | 717 | 269 | 775 | 4.22e-60 | 217 |
| MS.gene001273.t1 | AT5G64050 | 24.436 | 266 | 156 | 7 | 213 | 455 | 42 | 285 | 2.91e-13 | 73.6 |
Find 162 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAGGAGAATTTGAAATTA+TGG | 0.211763 | 1.4:+32562096 | MS.gene001273:CDS |
| TTGCCGACTGGCTGGTCTTT+TGG | 0.224508 | 1.4:-32561618 | None:intergenic |
| CGCAATGACCGCAGTGTGTC+TGG | 0.261894 | 1.4:-32562826 | None:intergenic |
| AGCTCTGTTGAACAAGTATT+TGG | 0.262075 | 1.4:+32561800 | MS.gene001273:CDS |
| CAATCGCAGATCTAGCTATC+TGG | 0.266430 | 1.4:+32561265 | MS.gene001273:CDS |
| ACAGAGCCTCATCATAAAAT+TGG | 0.269976 | 1.4:+32562230 | MS.gene001273:CDS |
| CTTATCTACTTCCTTTACTA+TGG | 0.287844 | 1.4:-32563039 | None:intergenic |
| GCAACTCTTCCTAATTTCTA+TGG | 0.300296 | 1.4:+32560091 | MS.gene001273:CDS |
| TCCAGATGAACAAATGAAAA+AGG | 0.300971 | 1.4:+32562031 | MS.gene001273:CDS |
| CGCTAACGGTGGCGTGGCGG+CGG | 0.305466 | 1.4:-32559848 | None:intergenic |
| ACGCTTAAGATTTCGCATAT+TGG | 0.307983 | 1.4:-32563603 | None:intergenic |
| TTACCTCATTACGAAGAAAA+AGG | 0.308169 | 1.4:+32563193 | MS.gene001273:CDS |
| TCAGCAAACGAAAGCTTTCA+TGG | 0.309082 | 1.4:+32562447 | MS.gene001273:CDS |
| GCTATCTGGGCAGGTCTTGC+AGG | 0.316994 | 1.4:+32561279 | MS.gene001273:CDS |
| CGAATTTAGCCGGTTGAATA+TGG | 0.317857 | 1.4:+32562412 | MS.gene001273:CDS |
| AGATTACTTCCCTGAGTTGA+TGG | 0.323642 | 1.4:+32561959 | MS.gene001273:CDS |
| TGGAGAGAAAGGGATATTTC+AGG | 0.324909 | 1.4:+32563642 | MS.gene001273:CDS |
| GATGTTTGCTGCCTGCCGTC+TGG | 0.331276 | 1.4:-32563716 | None:intergenic |
| TGAAGATAGCCACTGGGTTC+AGG | 0.349425 | 1.4:-32561759 | None:intergenic |
| CCCAGTGGCTATCTTCATAT+TGG | 0.358754 | 1.4:+32561765 | MS.gene001273:CDS |
| AAGCTACCACATATACAAAA+AGG | 0.360107 | 1.4:+32562943 | MS.gene001273:CDS |
| GAAGTCACAGCAACATATAT+TGG | 0.366976 | 1.4:+32561561 | MS.gene001273:CDS |
| TCAAATTCTCCTCTACACTA+TGG | 0.368726 | 1.4:-32562088 | None:intergenic |
| GCTAACGGTGGCGTGGCGGC+GGG | 0.369662 | 1.4:-32559847 | None:intergenic |
| CGCCGCCACGCCACCGTTAG+CGG | 0.386038 | 1.4:+32559849 | MS.gene001273:CDS |
| ACCCTGTGACATTCCCATCT+TGG | 0.408163 | 1.4:-32563064 | None:intergenic |
| TCATGGAATGGGACAAGCTC+TGG | 0.411380 | 1.4:+32562769 | MS.gene001273:CDS |
| GCGTGGCGGCGGGGAAAGAA+AGG | 0.412386 | 1.4:-32559837 | None:intergenic |
| AGTATTGCAGCTGGAGAGAA+AGG | 0.419290 | 1.4:+32563631 | MS.gene001273:CDS |
| AGTTGGATACACTTTATACT+TGG | 0.420137 | 1.4:-32562255 | None:intergenic |
| ACACGATTGGTTTCGAAGGC+CGG | 0.426191 | 1.4:-32563682 | None:intergenic |
| GGATCACGGAGTGATTTGTT+TGG | 0.426882 | 1.4:-32562188 | None:intergenic |
| ACTAGTTAGCCTGACATTGA+TGG | 0.433753 | 1.4:+32563163 | MS.gene001273:CDS |
| TGAAGAAAATCCGGCGAGCT+TGG | 0.433828 | 1.4:-32559884 | None:intergenic |
| CTTTGTTTGCAGCTTGAGAA+AGG | 0.435061 | 1.4:+32563491 | MS.gene001273:intron |
| CCACATTTCTCTTCTCCAAC+GGG | 0.442745 | 1.4:+32559941 | MS.gene001273:CDS |
| GATAAAAGATGTTGAGATGT+TGG | 0.447522 | 1.4:+32561905 | MS.gene001273:CDS |
| GGAAGTAACCTTGATCGATT+GGG | 0.448773 | 1.4:+32563010 | MS.gene001273:CDS |
| CCACAAAACTGAAGCTCACT+TGG | 0.452027 | 1.4:+32563123 | MS.gene001273:CDS |
| CTTCCCTGAGTTGATGGAAC+TGG | 0.453446 | 1.4:+32561965 | MS.gene001273:CDS |
| GTCAATGGATGAAGAAAATC+CGG | 0.453714 | 1.4:-32559893 | None:intergenic |
| CAGCTTGAGAAAGGAAAGAA+TGG | 0.456822 | 1.4:+32563500 | MS.gene001273:intron |
| TTATGGAAGGAAATGATTGC+AGG | 0.457763 | 1.4:+32562113 | MS.gene001273:CDS |
| AAATCTCAATCTCATGGAAT+GGG | 0.463289 | 1.4:+32562758 | MS.gene001273:CDS |
| GTATTGCAACGATAATAAAC+AGG | 0.465188 | 1.4:-32562209 | None:intergenic |
| CTTTATCCTTGCCGACTGGC+TGG | 0.467370 | 1.4:-32561626 | None:intergenic |
| CAAGTATATTGATGACTACT+TGG | 0.468006 | 1.4:+32561209 | MS.gene001273:CDS |
| GGCATTTCCCCAATCGATCA+AGG | 0.470666 | 1.4:-32563018 | None:intergenic |
| AGGAGGAAGGGAGGTGTCAA+TGG | 0.471796 | 1.4:-32559908 | None:intergenic |
| AAAATCTCAATCTCATGGAA+TGG | 0.472161 | 1.4:+32562757 | MS.gene001273:CDS |
| GATAAAGTGAAGAATGTGAA+TGG | 0.472243 | 1.4:+32561642 | MS.gene001273:CDS |
| ATAAAGTGAAGAATGTGAAT+GGG | 0.472454 | 1.4:+32561643 | MS.gene001273:CDS |
| TTCTCATCTACGAATTTAGC+CGG | 0.474652 | 1.4:+32562402 | MS.gene001273:CDS |
| TCCAATATGAAGATAGCCAC+TGG | 0.476082 | 1.4:-32561766 | None:intergenic |
| TACTTCCTCACCTGCTGATA+CGG | 0.478040 | 1.4:-32562994 | None:intergenic |
| GCAGTGTGTCTGGGACATAC+AGG | 0.479972 | 1.4:-32562816 | None:intergenic |
| AGGAAGTAACCTTGATCGAT+TGG | 0.480105 | 1.4:+32563009 | MS.gene001273:CDS |
| ATGTTTGCTGCCTGCCGTCT+GGG | 0.480920 | 1.4:-32563715 | None:intergenic |
| ATAAAAGATGTTGAGATGTT+GGG | 0.483694 | 1.4:+32561906 | MS.gene001273:CDS |
| GGCGGAATCAGGAGGAAGGG+AGG | 0.488649 | 1.4:-32559917 | None:intergenic |
| CCCACATTTCTCTTCTCCAA+CGG | 0.489052 | 1.4:+32559940 | MS.gene001273:CDS |
| CATAGTAAAGGAAGTAGATA+AGG | 0.490754 | 1.4:+32563040 | MS.gene001273:CDS |
| GGTGTGATGTACCCTTTGTC+CGG | 0.495417 | 1.4:+32563663 | MS.gene001273:CDS |
| GACCAAGATGGGAATGTCAC+AGG | 0.497471 | 1.4:+32563062 | MS.gene001273:CDS |
| TATGCACATGTACTCTCATC+AGG | 0.497956 | 1.4:+32561165 | MS.gene001273:CDS |
| GGACAGGCAAAATCATAAGT+TGG | 0.503923 | 1.4:-32562272 | None:intergenic |
| GAGTGTAGACCATATTCAAC+CGG | 0.504461 | 1.4:-32562421 | None:intergenic |
| GATACTGAGCATTACGATCA+TGG | 0.505401 | 1.4:-32562346 | None:intergenic |
| TTCACTTTATCCTTGCCGAC+TGG | 0.507306 | 1.4:-32561630 | None:intergenic |
| ATGCGGACAAATGATTTCTC+AGG | 0.508905 | 1.4:-32562882 | None:intergenic |
| TTTCAGGTGCTGGAAAGAGA+TGG | 0.510988 | 1.4:+32561454 | MS.gene001273:intron |
| AATCAAACTCCATCAATGTC+AGG | 0.511094 | 1.4:-32563172 | None:intergenic |
| GACGCAGAGTCCGTATCAGC+AGG | 0.511379 | 1.4:+32562984 | MS.gene001273:CDS |
| TCAGCCAGTTCCATCAACTC+AGG | 0.512208 | 1.4:-32561969 | None:intergenic |
| TTTGTGCAAGGGTTAAGCAC+AGG | 0.513222 | 1.4:-32563554 | None:intergenic |
| GATCTTCCAGATGCTGAAGT+TGG | 0.514176 | 1.4:+32561714 | MS.gene001273:CDS |
| AAAATTAATTAGCCAGGGTA+AGG | 0.515011 | 1.4:+32561992 | MS.gene001273:CDS |
| GGCTTGCAGTGTTGTGTCCG+TGG | 0.515410 | 1.4:+32562146 | MS.gene001273:CDS |
| GGGATTGCAAATAACACGAT+TGG | 0.516721 | 1.4:-32563695 | None:intergenic |
| CCTTCACGAGCATCAACAAA+TGG | 0.521928 | 1.4:-32562293 | None:intergenic |
| GGCTGAGCGATACAAAGGTC+AGG | 0.521999 | 1.4:+32561821 | MS.gene001273:CDS |
| TCTGATAACATTAACGGAGG+AGG | 0.522475 | 1.4:+32561672 | MS.gene001273:CDS |
| AAGGTATCACTCATGCCCTT+CGG | 0.524399 | 1.4:+32562312 | MS.gene001273:CDS |
| AATCGCAGATCTAGCTATCT+GGG | 0.526585 | 1.4:+32561266 | MS.gene001273:CDS |
| TTCAGGTGCTGGAAAGAGAT+GGG | 0.528173 | 1.4:+32561455 | MS.gene001273:intron |
| ATCGTAATGCTCAGTATCAC+AGG | 0.530899 | 1.4:+32562351 | MS.gene001273:CDS |
| ATGTAACGCAGAAGAACAAA+TGG | 0.533432 | 1.4:-32560058 | None:intergenic |
| GAAGTAGATAAGGACCAAGA+TGG | 0.533557 | 1.4:+32563050 | MS.gene001273:CDS |
| GGAGAATTTGAAATTATGGA+AGG | 0.534607 | 1.4:+32562100 | MS.gene001273:CDS |
| GCGTGGAGAAGTATTGCAGC+TGG | 0.537955 | 1.4:+32563622 | MS.gene001273:CDS |
| GGTTTCGAAGGCCGGACAAA+GGG | 0.538169 | 1.4:-32563674 | None:intergenic |
| TGGTTTCGAAGGCCGGACAA+AGG | 0.539832 | 1.4:-32563675 | None:intergenic |
| GGGAATGTCACAGGGTTAAG+TGG | 0.540528 | 1.4:+32563071 | MS.gene001273:CDS |
| CAGCCAGTTCCATCAACTCA+GGG | 0.544119 | 1.4:-32561968 | None:intergenic |
| TTTGTTCTTCTGCGTTACAT+TGG | 0.545230 | 1.4:+32560061 | MS.gene001273:CDS |
| AAATCCGGCGAGCTTGGATG+CGG | 0.549060 | 1.4:-32559878 | None:intergenic |
| CTAACGGTGGCGTGGCGGCG+GGG | 0.550981 | 1.4:-32559846 | None:intergenic |
| AAGTAGATAAGGACCAAGAT+GGG | 0.560937 | 1.4:+32563051 | MS.gene001273:CDS |
| TTGGGGAAATGCCATAGTAA+AGG | 0.561628 | 1.4:+32563028 | MS.gene001273:CDS |
| GCAATGACCGCAGTGTGTCT+GGG | 0.562664 | 1.4:-32562825 | None:intergenic |
| CGTGGCGGCGGGGAAAGAAA+GGG | 0.563293 | 1.4:-32559836 | None:intergenic |
| CCGTTGGAGAAGAGAAATGT+GGG | 0.567490 | 1.4:-32559940 | None:intergenic |
| ACGAGCATCAACAAATGGAC+AGG | 0.568037 | 1.4:-32562288 | None:intergenic |
| GCAGATCTAGCTATCTGGGC+AGG | 0.571047 | 1.4:+32561270 | MS.gene001273:CDS |
| CTAACTAGTTCATCTAACTC+AGG | 0.576697 | 1.4:-32563149 | None:intergenic |
| TCACAGGATTCAAGAGGACA+TGG | 0.578665 | 1.4:+32562367 | MS.gene001273:CDS |
| TATTTGCAATCCCAGACGGC+AGG | 0.579483 | 1.4:+32563705 | MS.gene001273:CDS |
| TAACGGAGGAGGCAAGCCTT+CGG | 0.583468 | 1.4:+32561683 | MS.gene001273:CDS |
| GTGTTGTGTCCGTGGGAAGT+TGG | 0.586102 | 1.4:+32562154 | MS.gene001273:CDS |
| AGCTTGAGAAAGGAAAGAAT+GGG | 0.586130 | 1.4:+32563501 | MS.gene001273:intron |
| ACGATGGTACAATTCAATAG+TGG | 0.586943 | 1.4:+32561515 | MS.gene001273:CDS |
| GTGTTATTTGCAATCCCAGA+CGG | 0.588415 | 1.4:+32563701 | MS.gene001273:CDS |
| GCTTGCAGTGTTGTGTCCGT+GGG | 0.588621 | 1.4:+32562147 | MS.gene001273:CDS |
| ATGGTATTCACTTGACCGAA+GGG | 0.592206 | 1.4:-32562327 | None:intergenic |
| AGAGTCCGTATCAGCAGGTG+AGG | 0.595755 | 1.4:+32562989 | MS.gene001273:CDS |
| CCTTGCAGTGTAGGAAATCG+TGG | 0.598579 | 1.4:-32562506 | None:intergenic |
| AATAACACGATTGGTTTCGA+AGG | 0.600160 | 1.4:-32563686 | None:intergenic |
| AATGATTGCAGGATCAGAGA+GGG | 0.601106 | 1.4:+32562124 | MS.gene001273:CDS |
| GAAAGAGATGGGAAAGCTTG+AGG | 0.602516 | 1.4:+32561466 | MS.gene001273:CDS |
| TTGTGCAAGGGTTAAGCACA+GGG | 0.603914 | 1.4:-32563553 | None:intergenic |
| CATTTGTCCGCATCATACCT+AGG | 0.604356 | 1.4:+32562892 | MS.gene001273:CDS |
| CCCGTTGGAGAAGAGAAATG+TGG | 0.604923 | 1.4:-32559941 | None:intergenic |
| ATCGCCGCATCCAAGCTCGC+CGG | 0.606160 | 1.4:+32559874 | MS.gene001273:CDS |
| CCACGATTTCCTACACTGCA+AGG | 0.607513 | 1.4:+32562506 | MS.gene001273:CDS |
| TACCGCTAACGGTGGCGTGG+CGG | 0.610856 | 1.4:-32559851 | None:intergenic |
| AAAAGACCAGCCAGTCGGCA+AGG | 0.611058 | 1.4:+32561620 | MS.gene001273:CDS |
| CCATTTGTTGATGCTCGTGA+AGG | 0.612122 | 1.4:+32562293 | MS.gene001273:CDS |
| CGCACAATTCCTTGCAGTGT+AGG | 0.612505 | 1.4:-32562515 | None:intergenic |
| CATGGTATTCACTTGACCGA+AGG | 0.616177 | 1.4:-32562328 | None:intergenic |
| CAGTGTGTCTGGGACATACA+GGG | 0.618476 | 1.4:-32562815 | None:intergenic |
| TAAAGTGAAGAATGTGAATG+GGG | 0.619059 | 1.4:+32561644 | MS.gene001273:CDS |
| GTATTGCAGCTGGAGAGAAA+GGG | 0.620537 | 1.4:+32563632 | MS.gene001273:CDS |
| GATTACCGCTAACGGTGGCG+TGG | 0.621156 | 1.4:-32559854 | None:intergenic |
| CCAATATGAAGATAGCCACT+GGG | 0.621615 | 1.4:-32561765 | None:intergenic |
| ATGCAGAAACCATAGTGTAG+AGG | 0.630682 | 1.4:+32562079 | MS.gene001273:CDS |
| CGTAGCAGGTCGAAATTGCG+TGG | 0.631126 | 1.4:+32560034 | MS.gene001273:intron |
| GTATTGTTAACCCTCACTGA+TGG | 0.633663 | 1.4:+32562858 | MS.gene001273:CDS |
| TATTTGGCTGAGCGATACAA+AGG | 0.634764 | 1.4:+32561816 | MS.gene001273:CDS |
| ACCAAGATGGGAATGTCACA+GGG | 0.639741 | 1.4:+32563063 | MS.gene001273:CDS |
| CTTGCATATCCAACTTCCCA+CGG | 0.647797 | 1.4:-32562163 | None:intergenic |
| AACGATAATAAACAGGATCA+CGG | 0.648773 | 1.4:-32562202 | None:intergenic |
| CGATTTGCACCTGAACCCAG+TGG | 0.648921 | 1.4:+32561750 | MS.gene001273:CDS |
| AATATGCGAAATCTTAAGCG+TGG | 0.649648 | 1.4:+32563605 | MS.gene001273:CDS |
| GGAAGATCTATCTCTACCGA+AGG | 0.650542 | 1.4:-32561699 | None:intergenic |
| AATTCAATAGTGGCAGAACA+TGG | 0.653058 | 1.4:+32561525 | MS.gene001273:CDS |
| GAAGTAACCTTGATCGATTG+GGG | 0.654003 | 1.4:+32563011 | MS.gene001273:CDS |
| TTTCTCAGGACCATCAGTGA+GGG | 0.655675 | 1.4:-32562868 | None:intergenic |
| AAGCCAAAAGACCAGCCAGT+CGG | 0.667938 | 1.4:+32561615 | MS.gene001273:CDS |
| GCGGCGATTACCGCTAACGG+TGG | 0.670603 | 1.4:-32559859 | None:intergenic |
| TCAGTATCACAGGATTCAAG+AGG | 0.673861 | 1.4:+32562361 | MS.gene001273:CDS |
| CAGACACACTGCGGTCATTG+CGG | 0.674648 | 1.4:+32562827 | MS.gene001273:CDS |
| GATGCGGCGATTACCGCTAA+CGG | 0.676425 | 1.4:-32559862 | None:intergenic |
| ATTTCTCAGGACCATCAGTG+AGG | 0.679162 | 1.4:-32562869 | None:intergenic |
| CTGCAAGGAATTGTGCGTAG+AGG | 0.680567 | 1.4:+32562521 | MS.gene001273:CDS |
| AATATCAAAATCTTGCACGA+TGG | 0.684460 | 1.4:+32561499 | MS.gene001273:CDS |
| CACAGGATTCAAGAGGACAT+GGG | 0.686727 | 1.4:+32562368 | MS.gene001273:CDS |
| CATCAACATATGCCTTACCC+TGG | 0.687143 | 1.4:-32562004 | None:intergenic |
| AAATGATTGCAGGATCAGAG+AGG | 0.689019 | 1.4:+32562123 | MS.gene001273:CDS |
| ATGATTGCAGGATCAGAGAG+GGG | 0.699155 | 1.4:+32562125 | MS.gene001273:CDS |
| GTTGGAGAAGAGAAATGTGG+GGG | 0.702868 | 1.4:-32559938 | None:intergenic |
| CGTTGGAGAAGAGAAATGTG+GGG | 0.703973 | 1.4:-32559939 | None:intergenic |
| TGTATGTCCCAGACACACTG+CGG | 0.755590 | 1.4:+32562818 | MS.gene001273:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAGTTGAATCA+TGG | + | chr1.4:32562477-32562496 | MS.gene001273:CDS | 15.0% |
| !! | AAATAAAAAAGTTGAATCAT+GGG | + | chr1.4:32562478-32562497 | MS.gene001273:CDS | 15.0% |
| !! | ACAAATTCTTATAACATATA+TGG | - | chr1.4:32563351-32563370 | None:intergenic | 15.0% |
| !!! | ATGTTATAAGAATTTGTTAA+CGG | + | chr1.4:32563354-32563373 | MS.gene001273:intron | 15.0% |
| !!! | GTCAATAATTTTTTTATTGA+TGG | - | chr1.4:32562796-32562815 | None:intergenic | 15.0% |
| !! | AAGCAAATAAAAACTTAAAC+AGG | - | chr1.4:32563474-32563493 | None:intergenic | 20.0% |
| !! | AGCAAATAAAAACTTAAACA+GGG | - | chr1.4:32563473-32563492 | None:intergenic | 20.0% |
| !! | ATATATCAGAAAAAATAACC+TGG | - | chr1.4:32560138-32560157 | None:intergenic | 20.0% |
| !! | ATATATGGAAAATTCATGAA+AGG | - | chr1.4:32563336-32563355 | None:intergenic | 20.0% |
| !! | CTTACTAACAAATAAGAATA+TGG | + | chr1.4:32562633-32562652 | MS.gene001273:intron | 20.0% |
| !! | GAAAGAAAAAAAAGAATTTG+AGG | + | chr1.4:32561875-32561894 | MS.gene001273:CDS | 20.0% |
| !! | TTTGATTCTGTCATTAATAA+AGG | + | chr1.4:32563233-32563252 | MS.gene001273:intron | 20.0% |
| !!! | AATTCTTTTTTTTCTTTCTC+AGG | - | chr1.4:32561873-32561892 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAGTTTATAGCT+TGG | + | chr1.4:32560312-32560331 | MS.gene001273:intron | 20.0% |
| !!! | ATTGTTTTCATAAGATAACT+TGG | + | chr1.4:32560664-32560683 | MS.gene001273:intron | 20.0% |
| !!! | GATTTTTCTGATAACATTAA+CGG | + | chr1.4:32561666-32561685 | MS.gene001273:CDS | 20.0% |
| ! | AATAAGTTGTTTAACCAAAC+AGG | - | chr1.4:32560227-32560246 | None:intergenic | 25.0% |
| ! | ATAAAAGATGTTGAGATGTT+GGG | + | chr1.4:32561906-32561925 | MS.gene001273:CDS | 25.0% |
| ! | ATAAAGTGAAGAATGTGAAT+GGG | + | chr1.4:32561643-32561662 | MS.gene001273:CDS | 25.0% |
| ! | ATAAGTTGTTTAACCAAACA+GGG | - | chr1.4:32560226-32560245 | None:intergenic | 25.0% |
| ! | ATCAAAAAATCTCAATCTCA+TGG | + | chr1.4:32562752-32562771 | MS.gene001273:CDS | 25.0% |
| ! | GATTGTTTGACAATAGTTTA+GGG | + | chr1.4:32560981-32561000 | MS.gene001273:intron | 25.0% |
| ! | TGATTGTTTGACAATAGTTT+AGG | + | chr1.4:32560980-32560999 | MS.gene001273:intron | 25.0% |
| ! | TGTCAAACAATCAGTTAATT+TGG | - | chr1.4:32560973-32560992 | None:intergenic | 25.0% |
| !! | GGTCTTTAAGAATATATTGA+CGG | + | chr1.4:32560617-32560636 | MS.gene001273:intron | 25.0% |
| !! | TAGAGGAGAATTTGAAATTA+TGG | + | chr1.4:32562096-32562115 | MS.gene001273:CDS | 25.0% |
| !! | TATGATATTTCTGTAGTTCA+AGG | - | chr1.4:32560879-32560898 | None:intergenic | 25.0% |
| !! | TGGTATTTATAGCCTTTTAT+GGG | + | chr1.4:32560470-32560489 | MS.gene001273:intron | 25.0% |
| AAAATCTCAATCTCATGGAA+TGG | + | chr1.4:32562757-32562776 | MS.gene001273:CDS | 30.0% | |
| AAAATTAATTAGCCAGGGTA+AGG | + | chr1.4:32561992-32562011 | MS.gene001273:CDS | 30.0% | |
| AAAGCACAATAAGGAATACT+AGG | + | chr1.4:32560385-32560404 | MS.gene001273:intron | 30.0% | |
| AAATCTCAATCTCATGGAAT+GGG | + | chr1.4:32562758-32562777 | MS.gene001273:CDS | 30.0% | |
| AACAAATGAAAAAGGAGAGA+AGG | + | chr1.4:32562039-32562058 | MS.gene001273:CDS | 30.0% | |
| AACGATAATAAACAGGATCA+CGG | - | chr1.4:32562205-32562224 | None:intergenic | 30.0% | |
| AAGCACAATAAGGAATACTA+GGG | + | chr1.4:32560386-32560405 | MS.gene001273:intron | 30.0% | |
| AAGCTACCACATATACAAAA+AGG | + | chr1.4:32562943-32562962 | MS.gene001273:CDS | 30.0% | |
| AATATCAAAATCTTGCACGA+TGG | + | chr1.4:32561499-32561518 | MS.gene001273:CDS | 30.0% | |
| AATTTGCAATTATTCGTAGC+AGG | + | chr1.4:32560020-32560039 | MS.gene001273:intron | 30.0% | |
| ACAAATGAAAAAGGAGAGAA+GGG | + | chr1.4:32562040-32562059 | MS.gene001273:CDS | 30.0% | |
| AGAGAAACAATCACTAAACA+AGG | - | chr1.4:32561378-32561397 | None:intergenic | 30.0% | |
| AGCAATATTTACTGCTTGTT+TGG | - | chr1.4:32560812-32560831 | None:intergenic | 30.0% | |
| AGGTAAAGATGAATAGGTAT+AGG | - | chr1.4:32561324-32561343 | None:intergenic | 30.0% | |
| AGTTGGATACACTTTATACT+TGG | - | chr1.4:32562258-32562277 | None:intergenic | 30.0% | |
| ATCTGAAAAGTCAAAGAAAC+AGG | - | chr1.4:32561129-32561148 | None:intergenic | 30.0% | |
| ATGACAAACACTTACGTATT+AGG | + | chr1.4:32560273-32560292 | MS.gene001273:intron | 30.0% | |
| ATTCATGAAAGGTTCATGAT+TGG | - | chr1.4:32563325-32563344 | None:intergenic | 30.0% | |
| ATTGATAGATCATAGAAACG+AGG | - | chr1.4:32560000-32560019 | None:intergenic | 30.0% | |
| CATAGTAAAGGAAGTAGATA+AGG | + | chr1.4:32563040-32563059 | MS.gene001273:CDS | 30.0% | |
| CCACATATACAAAAAGGATA+TGG | + | chr1.4:32562949-32562968 | MS.gene001273:CDS | 30.0% | |
| CCATCAAGTTTCATAGATTA+AGG | - | chr1.4:32561405-32561424 | None:intergenic | 30.0% | |
| CCTTAATCTATGAAACTTGA+TGG | + | chr1.4:32561402-32561421 | MS.gene001273:intron | 30.0% | |
| CTTATCTACTTCCTTTACTA+TGG | - | chr1.4:32563042-32563061 | None:intergenic | 30.0% | |
| GATAAAAGATGTTGAGATGT+TGG | + | chr1.4:32561905-32561924 | MS.gene001273:CDS | 30.0% | |
| GATAAAGTGAAGAATGTGAA+TGG | + | chr1.4:32561642-32561661 | MS.gene001273:CDS | 30.0% | |
| GCAACATATATTGGCAAAAA+AGG | + | chr1.4:32561570-32561589 | MS.gene001273:CDS | 30.0% | |
| GCTGAAAAATTAATTAGCCA+GGG | + | chr1.4:32561987-32562006 | MS.gene001273:CDS | 30.0% | |
| GTATTGCAACGATAATAAAC+AGG | - | chr1.4:32562212-32562231 | None:intergenic | 30.0% | |
| TAAAGTGAAGAATGTGAATG+GGG | + | chr1.4:32561644-32561663 | MS.gene001273:CDS | 30.0% | |
| TATATTGGCAAAAAAGGATC+AGG | + | chr1.4:32561576-32561595 | MS.gene001273:CDS | 30.0% | |
| TATCACAGGTAAAGATGAAT+AGG | - | chr1.4:32561330-32561349 | None:intergenic | 30.0% | |
| TATTTACTGCTTGTTTGGAT+TGG | - | chr1.4:32560807-32560826 | None:intergenic | 30.0% | |
| TCCAGATGAACAAATGAAAA+AGG | + | chr1.4:32562031-32562050 | MS.gene001273:CDS | 30.0% | |
| TCCTTGGTTTCTTTCAAAAT+AGG | + | chr1.4:32560929-32560948 | MS.gene001273:intron | 30.0% | |
| TGACAAACACTTACGTATTA+GGG | + | chr1.4:32560274-32560293 | MS.gene001273:intron | 30.0% | |
| TTACCTCATTACGAAGAAAA+AGG | + | chr1.4:32563193-32563212 | MS.gene001273:CDS | 30.0% | |
| TTGTTGAACAAGTATGTACA+AGG | + | chr1.4:32562573-32562592 | MS.gene001273:intron | 30.0% | |
| TTGTTTAGGGATCAAATTGA+AGG | + | chr1.4:32561054-32561073 | MS.gene001273:intron | 30.0% | |
| ! | AGTGATCAACATTTTAAGCA+TGG | - | chr1.4:32562708-32562727 | None:intergenic | 30.0% |
| ! | ATACCTTTTTCTTCGTAATG+AGG | - | chr1.4:32563199-32563218 | None:intergenic | 30.0% |
| ! | CAAGTATATTGATGACTACT+TGG | + | chr1.4:32561209-32561228 | MS.gene001273:CDS | 30.0% |
| ! | CCATATCCTTTTTGTATATG+TGG | - | chr1.4:32562952-32562971 | None:intergenic | 30.0% |
| ! | GGAGAATTTGAAATTATGGA+AGG | + | chr1.4:32562100-32562119 | MS.gene001273:CDS | 30.0% |
| ! | GTGGTATTTATAGCCTTTTA+TGG | + | chr1.4:32560469-32560488 | MS.gene001273:intron | 30.0% |
| ! | TACTTGCAAAAAGCACAATA+AGG | + | chr1.4:32560376-32560395 | MS.gene001273:intron | 30.0% |
| ! | TGACTTTTCAGATTGATGAA+TGG | + | chr1.4:32561136-32561155 | MS.gene001273:intron | 30.0% |
| ! | TTGGATCCAATTTTATGATG+AGG | - | chr1.4:32562239-32562258 | None:intergenic | 30.0% |
| ! | TTTTCTGATAACATTAACGG+AGG | + | chr1.4:32561669-32561688 | MS.gene001273:CDS | 30.0% |
| !! | AAATGTTTTTCAAACTAGCC+AGG | + | chr1.4:32560117-32560136 | MS.gene001273:CDS | 30.0% |
| !! | ACATTTTGGCCATAGAAATT+AGG | - | chr1.4:32560103-32560122 | None:intergenic | 30.0% |
| !! | TCCTATTTTGAAAGAAACCA+AGG | - | chr1.4:32560933-32560952 | None:intergenic | 30.0% |
| !! | TCCTTTTTCATTTGTTCATC+TGG | - | chr1.4:32562035-32562054 | None:intergenic | 30.0% |
| !!! | GGCTAGTTTGAAAAACATTT+TGG | - | chr1.4:32560117-32560136 | None:intergenic | 30.0% |
| AAAAAGGAGACTCTAGCATA+TGG | + | chr1.4:32563575-32563594 | MS.gene001273:CDS | 35.0% | |
| AAGTAGATAAGGACCAAGAT+GGG | + | chr1.4:32563051-32563070 | MS.gene001273:CDS | 35.0% | |
| AATATGCGAAATCTTAAGCG+TGG | + | chr1.4:32563605-32563624 | MS.gene001273:CDS | 35.0% | |
| AATCAAACTCCATCAATGTC+AGG | - | chr1.4:32563175-32563194 | None:intergenic | 35.0% | |
| AATTCAATAGTGGCAGAACA+TGG | + | chr1.4:32561525-32561544 | MS.gene001273:CDS | 35.0% | |
| ACAGAGCCTCATCATAAAAT+TGG | + | chr1.4:32562230-32562249 | MS.gene001273:CDS | 35.0% | |
| ACGATGGTACAATTCAATAG+TGG | + | chr1.4:32561515-32561534 | MS.gene001273:CDS | 35.0% | |
| ACGCTTAAGATTTCGCATAT+TGG | - | chr1.4:32563606-32563625 | None:intergenic | 35.0% | |
| AGACTTAGTAGTAGTATCAC+AGG | - | chr1.4:32561344-32561363 | None:intergenic | 35.0% | |
| AGCTCTGTTGAACAAGTATT+TGG | + | chr1.4:32561800-32561819 | MS.gene001273:CDS | 35.0% | |
| AGCTTGAGAAAGGAAAGAAT+GGG | + | chr1.4:32563501-32563520 | MS.gene001273:intron | 35.0% | |
| AGGGTTTAGTATCGTATTCT+AGG | + | chr1.4:32560405-32560424 | MS.gene001273:intron | 35.0% | |
| AGTGTGAAGAGATATGAGAA+AGG | - | chr1.4:32559974-32559993 | None:intergenic | 35.0% | |
| ATCGACAATAGTTTCAAGAC+TGG | - | chr1.4:32560903-32560922 | None:intergenic | 35.0% | |
| ATGTAACGCAGAAGAACAAA+TGG | - | chr1.4:32560061-32560080 | None:intergenic | 35.0% | |
| CTAACTAGTTCATCTAACTC+AGG | - | chr1.4:32563152-32563171 | None:intergenic | 35.0% | |
| CTAGGGTTTAGACTGATTAT+TGG | + | chr1.4:32560423-32560442 | MS.gene001273:intron | 35.0% | |
| GAAGTCACAGCAACATATAT+TGG | + | chr1.4:32561561-32561580 | MS.gene001273:CDS | 35.0% | |
| GCAACTCTTCCTAATTTCTA+TGG | + | chr1.4:32560091-32560110 | MS.gene001273:CDS | 35.0% | |
| GGCTGAAAAATTAATTAGCC+AGG | + | chr1.4:32561986-32562005 | MS.gene001273:CDS | 35.0% | |
| GGGTTTAGTATCGTATTCTA+GGG | + | chr1.4:32560406-32560425 | MS.gene001273:intron | 35.0% | |
| GTCAATGGATGAAGAAAATC+CGG | - | chr1.4:32559896-32559915 | None:intergenic | 35.0% | |
| GTGTGAAGAGATATGAGAAA+GGG | - | chr1.4:32559973-32559992 | None:intergenic | 35.0% | |
| TACTTAGGCAGCAAGTAATA+GGG | + | chr1.4:32560506-32560525 | MS.gene001273:intron | 35.0% | |
| TATTGTCGATAGTTAGTCCT+TGG | + | chr1.4:32560913-32560932 | MS.gene001273:intron | 35.0% | |
| TCAAATTCTCCTCTACACTA+TGG | - | chr1.4:32562091-32562110 | None:intergenic | 35.0% | |
| TTACTTAGGCAGCAAGTAAT+AGG | + | chr1.4:32560505-32560524 | MS.gene001273:intron | 35.0% | |
| TTATGGAAGGAAATGATTGC+AGG | + | chr1.4:32562113-32562132 | MS.gene001273:CDS | 35.0% | |
| TTCTCATCTACGAATTTAGC+CGG | + | chr1.4:32562402-32562421 | MS.gene001273:CDS | 35.0% | |
| TTGTGTCAGTAGAAATCGTA+TGG | - | chr1.4:32563302-32563321 | None:intergenic | 35.0% | |
| TTTGTTCTTCTGCGTTACAT+TGG | + | chr1.4:32560061-32560080 | MS.gene001273:CDS | 35.0% | |
| ! | AACCAAAGTGTCTATGCATA+GGG | - | chr1.4:32563394-32563413 | None:intergenic | 35.0% |
| ! | ACAAAAAGTATGAAGCTGCT+AGG | + | chr1.4:32562916-32562935 | MS.gene001273:CDS | 35.0% |
| ! | TTTATAGCCTTTTATGGGTC+TGG | + | chr1.4:32560475-32560494 | MS.gene001273:intron | 35.0% |
| !! | AATAACACGATTGGTTTCGA+AGG | - | chr1.4:32563689-32563708 | None:intergenic | 35.0% |
| !! | TTGTCTTTTAAGTCCCTGTT+TGG | + | chr1.4:32560210-32560229 | MS.gene001273:intron | 35.0% |
| !!! | GAGAAGCGTACATTTTTAGT+TGG | + | chr1.4:32561231-32561250 | MS.gene001273:CDS | 35.0% |
| AAAGACCTAAGACCTCCAAA+AGG | - | chr1.4:32560604-32560623 | None:intergenic | 40.0% | |
| AAATGATTGCAGGATCAGAG+AGG | + | chr1.4:32562123-32562142 | MS.gene001273:CDS | 40.0% | |
| AAGGCTATAAATACCACCCT+TGG | - | chr1.4:32560466-32560485 | None:intergenic | 40.0% | |
| AATCGCAGATCTAGCTATCT+GGG | + | chr1.4:32561266-32561285 | MS.gene001273:CDS | 40.0% | |
| AATGATTGCAGGATCAGAGA+GGG | + | chr1.4:32562124-32562143 | MS.gene001273:CDS | 40.0% | |
| ACTGTTCTCTGTACTTGTAC+AGG | + | chr1.4:32562725-32562744 | MS.gene001273:intron | 40.0% | |
| ACTTAGGCAGCAAGTAATAG+GGG | + | chr1.4:32560507-32560526 | MS.gene001273:intron | 40.0% | |
| AGGAAGTAACCTTGATCGAT+TGG | + | chr1.4:32563009-32563028 | MS.gene001273:CDS | 40.0% | |
| AGGCTATAAATACCACCCTT+GGG | - | chr1.4:32560465-32560484 | None:intergenic | 40.0% | |
| AGTTCAGAGACAAAGTTCGA+GGG | + | chr1.4:32561024-32561043 | MS.gene001273:intron | 40.0% | |
| ATCGTAATGCTCAGTATCAC+AGG | + | chr1.4:32562351-32562370 | MS.gene001273:CDS | 40.0% | |
| ATGCAGAAACCATAGTGTAG+AGG | + | chr1.4:32562079-32562098 | MS.gene001273:CDS | 40.0% | |
| ATGCGGACAAATGATTTCTC+AGG | - | chr1.4:32562885-32562904 | None:intergenic | 40.0% | |
| ATGGTATTCACTTGACCGAA+GGG | - | chr1.4:32562330-32562349 | None:intergenic | 40.0% | |
| CAGCTTGAGAAAGGAAAGAA+TGG | + | chr1.4:32563500-32563519 | MS.gene001273:intron | 40.0% | |
| CCAATATGAAGATAGCCACT+GGG | - | chr1.4:32561768-32561787 | None:intergenic | 40.0% | |
| CGAATTTAGCCGGTTGAATA+TGG | + | chr1.4:32562412-32562431 | MS.gene001273:CDS | 40.0% | |
| CTGTTCTCTGTACTTGTACA+GGG | + | chr1.4:32562726-32562745 | MS.gene001273:intron | 40.0% | |
| CTTACGTATTAGGGTCTGTT+TGG | + | chr1.4:32560283-32560302 | MS.gene001273:intron | 40.0% | |
| CTTGAGTGAACCTTCCTATT+GGG | + | chr1.4:32560830-32560849 | MS.gene001273:intron | 40.0% | |
| GAAGTAACCTTGATCGATTG+GGG | + | chr1.4:32563011-32563030 | MS.gene001273:CDS | 40.0% | |
| GAAGTAGATAAGGACCAAGA+TGG | + | chr1.4:32563050-32563069 | MS.gene001273:CDS | 40.0% | |
| GAGTGTAGACCATATTCAAC+CGG | - | chr1.4:32562424-32562443 | None:intergenic | 40.0% | |
| GATACTGAGCATTACGATCA+TGG | - | chr1.4:32562349-32562368 | None:intergenic | 40.0% | |
| GCTTAACCCTTGCACAAAAA+AGG | + | chr1.4:32563559-32563578 | MS.gene001273:CDS | 40.0% | |
| GGAAGTAACCTTGATCGATT+GGG | + | chr1.4:32563010-32563029 | MS.gene001273:CDS | 40.0% | |
| GGACAGGCAAAATCATAAGT+TGG | - | chr1.4:32562275-32562294 | None:intergenic | 40.0% | |
| GGGATTGCAAATAACACGAT+TGG | - | chr1.4:32563698-32563717 | None:intergenic | 40.0% | |
| GTATTGTTAACCCTCACTGA+TGG | + | chr1.4:32562858-32562877 | MS.gene001273:CDS | 40.0% | |
| TACCCTATGCATAGACACTT+TGG | + | chr1.4:32563389-32563408 | MS.gene001273:intron | 40.0% | |
| TAGTTCAGAGACAAAGTTCG+AGG | + | chr1.4:32561023-32561042 | MS.gene001273:intron | 40.0% | |
| TATGCACATGTACTCTCATC+AGG | + | chr1.4:32561165-32561184 | MS.gene001273:CDS | 40.0% | |
| TATTTGGCTGAGCGATACAA+AGG | + | chr1.4:32561816-32561835 | MS.gene001273:CDS | 40.0% | |
| TCAGCAAACGAAAGCTTTCA+TGG | + | chr1.4:32562447-32562466 | MS.gene001273:CDS | 40.0% | |
| TCAGTATCACAGGATTCAAG+AGG | + | chr1.4:32562361-32562380 | MS.gene001273:CDS | 40.0% | |
| TCCAATATGAAGATAGCCAC+TGG | - | chr1.4:32561769-32561788 | None:intergenic | 40.0% | |
| TCTGATAACATTAACGGAGG+AGG | + | chr1.4:32561672-32561691 | MS.gene001273:CDS | 40.0% | |
| TGGAGAGAAAGGGATATTTC+AGG | + | chr1.4:32563642-32563661 | MS.gene001273:CDS | 40.0% | |
| TGTTCTCTGTACTTGTACAG+GGG | + | chr1.4:32562727-32562746 | MS.gene001273:intron | 40.0% | |
| TTGGGGAAATGCCATAGTAA+AGG | + | chr1.4:32563028-32563047 | MS.gene001273:CDS | 40.0% | |
| ! | ACTAGTTAGCCTGACATTGA+TGG | + | chr1.4:32563163-32563182 | MS.gene001273:CDS | 40.0% |
| ! | ACTTTTCCAACTTCAGCATC+TGG | - | chr1.4:32561723-32561742 | None:intergenic | 40.0% |
| ! | AGATTACTTCCCTGAGTTGA+TGG | + | chr1.4:32561959-32561978 | MS.gene001273:CDS | 40.0% |
| ! | AGGCTTCTAGAAGCGAATAA+AGG | + | chr1.4:32560557-32560576 | MS.gene001273:intron | 40.0% |
| ! | AGTGGTGTTTTACATCGTGA+AGG | + | chr1.4:32563089-32563108 | MS.gene001273:CDS | 40.0% |
| ! | ATACGTTTTGCGAGACTGTT+TGG | - | chr1.4:32560761-32560780 | None:intergenic | 40.0% |
| ! | CGAAGAAAAAGGTATGTGCT+TGG | + | chr1.4:32563204-32563223 | MS.gene001273:intron | 40.0% |
| ! | CTTCTAGAAGCGAATAAAGG+CGG | + | chr1.4:32560560-32560579 | MS.gene001273:intron | 40.0% |
| ! | CTTTGTTTGCAGCTTGAGAA+AGG | + | chr1.4:32563491-32563510 | MS.gene001273:intron | 40.0% |
| ! | GAACCAAAGTGTCTATGCAT+AGG | - | chr1.4:32563395-32563414 | None:intergenic | 40.0% |
| ! | TTTTGTGCCTAGGTATGATG+CGG | - | chr1.4:32562902-32562921 | None:intergenic | 40.0% |
| !! | GCTTCATACTTTTTGTGCCT+AGG | - | chr1.4:32562912-32562931 | None:intergenic | 40.0% |
| !! | GTGTTATTTGCAATCCCAGA+CGG | + | chr1.4:32563701-32563720 | MS.gene001273:CDS | 40.0% |
| !! | TCAGGCTCTGCTTTTGAAAA+TGG | + | chr1.4:32561183-32561202 | MS.gene001273:CDS | 40.0% |
| !! | TGTTAGTTGCTGTTTGCTTC+TGG | + | chr1.4:32561094-32561113 | MS.gene001273:intron | 40.0% |
| !!! | AGAGTCTCCTTTTTTGTGCA+AGG | - | chr1.4:32563569-32563588 | None:intergenic | 40.0% |
| !!! | AGCAAGTAATAGGGGTGTTT+TGG | + | chr1.4:32560515-32560534 | MS.gene001273:intron | 40.0% |
| !!! | AGGGGTGTTTTGGGTATTTA+GGG | + | chr1.4:32560525-32560544 | MS.gene001273:intron | 40.0% |
| !!! | GAGTCTCCTTTTTTGTGCAA+GGG | - | chr1.4:32563568-32563587 | None:intergenic | 40.0% |
| !!! | GCAAGTAATAGGGGTGTTTT+GGG | + | chr1.4:32560516-32560535 | MS.gene001273:intron | 40.0% |
| !!! | TAGGGGTGTTTTGGGTATTT+AGG | + | chr1.4:32560524-32560543 | MS.gene001273:intron | 40.0% |
| ACCAAGATGGGAATGTCACA+GGG | + | chr1.4:32563063-32563082 | MS.gene001273:CDS | 45.0% | |
| ACGAGCATCAACAAATGGAC+AGG | - | chr1.4:32562291-32562310 | None:intergenic | 45.0% | |
| ACTTAAACAGGGAAGCAAGC+AGG | - | chr1.4:32563462-32563481 | None:intergenic | 45.0% | |
| AGTATTGCAGCTGGAGAGAA+AGG | + | chr1.4:32563631-32563650 | MS.gene001273:CDS | 45.0% | |
| ATGAAAAAGGAGAGAAGGGC+TGG | + | chr1.4:32562044-32562063 | MS.gene001273:CDS | 45.0% | |
| ATGATTGCAGGATCAGAGAG+GGG | + | chr1.4:32562125-32562144 | MS.gene001273:CDS | 45.0% | |
| ATTTCTCAGGACCATCAGTG+AGG | - | chr1.4:32562872-32562891 | None:intergenic | 45.0% | |
| CAATCGCAGATCTAGCTATC+TGG | + | chr1.4:32561265-32561284 | MS.gene001273:CDS | 45.0% | |
| CACAGGATTCAAGAGGACAT+GGG | + | chr1.4:32562368-32562387 | MS.gene001273:CDS | 45.0% | |
| CATCAACATATGCCTTACCC+TGG | - | chr1.4:32562007-32562026 | None:intergenic | 45.0% | |
| CATGGTATTCACTTGACCGA+AGG | - | chr1.4:32562331-32562350 | None:intergenic | 45.0% | |
| CATTTGTCCGCATCATACCT+AGG | + | chr1.4:32562892-32562911 | MS.gene001273:CDS | 45.0% | |
| CCACAAAACTGAAGCTCACT+TGG | + | chr1.4:32563123-32563142 | MS.gene001273:CDS | 45.0% | |
| CCACAAACCAGACCCATAAA+AGG | - | chr1.4:32560485-32560504 | None:intergenic | 45.0% | |
| CCACATTTCTCTTCTCCAAC+GGG | + | chr1.4:32559941-32559960 | MS.gene001273:CDS | 45.0% | |
| CCCACATTTCTCTTCTCCAA+CGG | + | chr1.4:32559940-32559959 | MS.gene001273:CDS | 45.0% | |
| CCCAGTGGCTATCTTCATAT+TGG | + | chr1.4:32561765-32561784 | MS.gene001273:CDS | 45.0% | |
| CCGTTGGAGAAGAGAAATGT+GGG | - | chr1.4:32559943-32559962 | None:intergenic | 45.0% | |
| CCTTCACGAGCATCAACAAA+TGG | - | chr1.4:32562296-32562315 | None:intergenic | 45.0% | |
| CGAGGGTGAGTGATTGTTTA+GGG | + | chr1.4:32561041-32561060 | MS.gene001273:intron | 45.0% | |
| CGTTGGAGAAGAGAAATGTG+GGG | - | chr1.4:32559942-32559961 | None:intergenic | 45.0% | |
| CTGTAGTTCAAGGACCCAAT+AGG | - | chr1.4:32560869-32560888 | None:intergenic | 45.0% | |
| CTTGCATATCCAACTTCCCA+CGG | - | chr1.4:32562166-32562185 | None:intergenic | 45.0% | |
| GAAAGAGATGGGAAAGCTTG+AGG | + | chr1.4:32561466-32561485 | MS.gene001273:CDS | 45.0% | |
| GAATAAAGGCGGTGTCTTGA+GGG | + | chr1.4:32560571-32560590 | MS.gene001273:intron | 45.0% | |
| GACCCAATAGGAGAGTAAGT+GGG | - | chr1.4:32560857-32560876 | None:intergenic | 45.0% | |
| GATCTTCCAGATGCTGAAGT+TGG | + | chr1.4:32561714-32561733 | MS.gene001273:CDS | 45.0% | |
| GCTTGAGTGAACCTTCCTAT+TGG | + | chr1.4:32560829-32560848 | MS.gene001273:intron | 45.0% | |
| GGAAGATCTATCTCTACCGA+AGG | - | chr1.4:32561702-32561721 | None:intergenic | 45.0% | |
| GTATTGCAGCTGGAGAGAAA+GGG | + | chr1.4:32563632-32563651 | MS.gene001273:CDS | 45.0% | |
| GTCCCACTTACTCTCCTATT+GGG | + | chr1.4:32560852-32560871 | MS.gene001273:intron | 45.0% | |
| GTTCTCTGTACTTGTACAGG+GGG | + | chr1.4:32562728-32562747 | MS.gene001273:intron | 45.0% | |
| GTTGGAGAAGAGAAATGTGG+GGG | - | chr1.4:32559941-32559960 | None:intergenic | 45.0% | |
| TACTTCCTCACCTGCTGATA+CGG | - | chr1.4:32562997-32563016 | None:intergenic | 45.0% | |
| TCACAGGATTCAAGAGGACA+TGG | + | chr1.4:32562367-32562386 | MS.gene001273:CDS | 45.0% | |
| TCGAGGGTGAGTGATTGTTT+AGG | + | chr1.4:32561040-32561059 | MS.gene001273:intron | 45.0% | |
| TCTCTTTCCAGCACCTGAAA+AGG | - | chr1.4:32561454-32561473 | None:intergenic | 45.0% | |
| TTCACTTTATCCTTGCCGAC+TGG | - | chr1.4:32561633-32561652 | None:intergenic | 45.0% | |
| TTGTGCAAGGGTTAAGCACA+GGG | - | chr1.4:32563556-32563575 | None:intergenic | 45.0% | |
| TTTCTCAGGACCATCAGTGA+GGG | - | chr1.4:32562871-32562890 | None:intergenic | 45.0% | |
| TTTGTGCAAGGGTTAAGCAC+AGG | - | chr1.4:32563557-32563576 | None:intergenic | 45.0% | |
| ! | AAGGTATCACTCATGCCCTT+CGG | + | chr1.4:32562312-32562331 | MS.gene001273:CDS | 45.0% |
| ! | CATCTACGCTATGCCTTTTC+AGG | + | chr1.4:32561438-32561457 | MS.gene001273:intron | 45.0% |
| ! | CCAAGTGAGCTTCAGTTTTG+TGG | - | chr1.4:32563126-32563145 | None:intergenic | 45.0% |
| ! | CCATTTGTTGATGCTCGTGA+AGG | + | chr1.4:32562293-32562312 | MS.gene001273:CDS | 45.0% |
| ! | CTGAAAAGGCATAGCGTAGA+TGG | - | chr1.4:32561440-32561459 | None:intergenic | 45.0% |
| ! | GGTCTGGTTTGTGGTTACTT+AGG | + | chr1.4:32560491-32560510 | MS.gene001273:intron | 45.0% |
| !! | CCTTTTATGGGTCTGGTTTG+TGG | + | chr1.4:32560482-32560501 | MS.gene001273:intron | 45.0% |
| !! | GGATCACGGAGTGATTTGTT+TGG | - | chr1.4:32562191-32562210 | None:intergenic | 45.0% |
| !! | GGGGTGTTTTGGGTATTTAG+GGG | + | chr1.4:32560526-32560545 | MS.gene001273:intron | 45.0% |
| !! | TTCAGGTGCTGGAAAGAGAT+GGG | + | chr1.4:32561455-32561474 | MS.gene001273:intron | 45.0% |
| !! | TTTCAGGTGCTGGAAAGAGA+TGG | + | chr1.4:32561454-32561473 | MS.gene001273:intron | 45.0% |
| !!! | TCTTTTGGCTTGGTTGCAGA+TGG | - | chr1.4:32561606-32561625 | None:intergenic | 45.0% |
| AAGCCAAAAGACCAGCCAGT+CGG | + | chr1.4:32561615-32561634 | MS.gene001273:CDS | 50.0% | |
| ACCCTGTGACATTCCCATCT+TGG | - | chr1.4:32563067-32563086 | None:intergenic | 50.0% | |
| ATGGACACGTGAATTGCTCG+TGG | - | chr1.4:32563283-32563302 | None:intergenic | 50.0% | |
| CAGCCAGTTCCATCAACTCA+GGG | - | chr1.4:32561971-32561990 | None:intergenic | 50.0% | |
| CCACGATTTCCTACACTGCA+AGG | + | chr1.4:32562506-32562525 | MS.gene001273:CDS | 50.0% | |
| CCCGTTGGAGAAGAGAAATG+TGG | - | chr1.4:32559944-32559963 | None:intergenic | 50.0% | |
| CCTTGCAGTGTAGGAAATCG+TGG | - | chr1.4:32562509-32562528 | None:intergenic | 50.0% | |
| CGAATAAAGGCGGTGTCTTG+AGG | + | chr1.4:32560570-32560589 | MS.gene001273:intron | 50.0% | |
| CGCACAATTCCTTGCAGTGT+AGG | - | chr1.4:32562518-32562537 | None:intergenic | 50.0% | |
| CTGCAAGGAATTGTGCGTAG+AGG | + | chr1.4:32562521-32562540 | MS.gene001273:CDS | 50.0% | |
| GACCAAGATGGGAATGTCAC+AGG | + | chr1.4:32563062-32563081 | MS.gene001273:CDS | 50.0% | |
| GAGAGTAAGTGGGACCCAAT+AGG | - | chr1.4:32560847-32560866 | None:intergenic | 50.0% | |
| GGACCCAATAGGAGAGTAAG+TGG | - | chr1.4:32560858-32560877 | None:intergenic | 50.0% | |
| GGCATTTCCCCAATCGATCA+AGG | - | chr1.4:32563021-32563040 | None:intergenic | 50.0% | |
| GGGAATGTCACAGGGTTAAG+TGG | + | chr1.4:32563071-32563090 | MS.gene001273:CDS | 50.0% | |
| GGTCCCACTTACTCTCCTAT+TGG | + | chr1.4:32560851-32560870 | MS.gene001273:intron | 50.0% | |
| GGTGTGATGTACCCTTTGTC+CGG | + | chr1.4:32563663-32563682 | MS.gene001273:CDS | 50.0% | |
| GTAAGTGGGACCCAATAGGA+AGG | - | chr1.4:32560843-32560862 | None:intergenic | 50.0% | |
| TATTTGCAATCCCAGACGGC+AGG | + | chr1.4:32563705-32563724 | MS.gene001273:CDS | 50.0% | |
| TCAGCCAGTTCCATCAACTC+AGG | - | chr1.4:32561972-32561991 | None:intergenic | 50.0% | |
| TCATGGAATGGGACAAGCTC+TGG | + | chr1.4:32562769-32562788 | MS.gene001273:CDS | 50.0% | |
| TGAAGAAAATCCGGCGAGCT+TGG | - | chr1.4:32559887-32559906 | None:intergenic | 50.0% | |
| TGAAGATAGCCACTGGGTTC+AGG | - | chr1.4:32561762-32561781 | None:intergenic | 50.0% | |
| TGTATGTCCCAGACACACTG+CGG | + | chr1.4:32562818-32562837 | MS.gene001273:CDS | 50.0% | |
| ! | CAGTGTGTCTGGGACATACA+GGG | - | chr1.4:32562818-32562837 | None:intergenic | 50.0% |
| !! | ACACGATTGGTTTCGAAGGC+CGG | - | chr1.4:32563685-32563704 | None:intergenic | 50.0% |
| !! | CTTCCCTGAGTTGATGGAAC+TGG | + | chr1.4:32561965-32561984 | MS.gene001273:CDS | 50.0% |
| !! | GGTATTTAGGGGCGTTCTAG+AGG | + | chr1.4:32560537-32560556 | MS.gene001273:intron | 50.0% |
| AAAAGACCAGCCAGTCGGCA+AGG | + | chr1.4:32561620-32561639 | MS.gene001273:CDS | 55.0% | |
| AAATCCGGCGAGCTTGGATG+CGG | - | chr1.4:32559881-32559900 | None:intergenic | 55.0% | |
| AGAAATGTGGGGGCGGAATC+AGG | - | chr1.4:32559931-32559950 | None:intergenic | 55.0% | |
| AGAGTCCGTATCAGCAGGTG+AGG | + | chr1.4:32562989-32563008 | MS.gene001273:CDS | 55.0% | |
| ATGCCTTGAGATCGCTCCCA+AGG | + | chr1.4:32560446-32560465 | MS.gene001273:intron | 55.0% | |
| CAGACACACTGCGGTCATTG+CGG | + | chr1.4:32562827-32562846 | MS.gene001273:CDS | 55.0% | |
| CGATTTGCACCTGAACCCAG+TGG | + | chr1.4:32561750-32561769 | MS.gene001273:CDS | 55.0% | |
| CGTAGCAGGTCGAAATTGCG+TGG | + | chr1.4:32560034-32560053 | MS.gene001273:intron | 55.0% | |
| GAGAAAGGGAACGTACCCGT+TGG | - | chr1.4:32559959-32559978 | None:intergenic | 55.0% | |
| GATGCGGCGATTACCGCTAA+CGG | - | chr1.4:32559865-32559884 | None:intergenic | 55.0% | |
| GCAATGACCGCAGTGTGTCT+GGG | - | chr1.4:32562828-32562847 | None:intergenic | 55.0% | |
| GCAGATCTAGCTATCTGGGC+AGG | + | chr1.4:32561270-32561289 | MS.gene001273:CDS | 55.0% | |
| GCTTGCAGTGTTGTGTCCGT+GGG | + | chr1.4:32562147-32562166 | MS.gene001273:CDS | 55.0% | |
| GGAGAAGAGAAATGTGGGGG+CGG | - | chr1.4:32559938-32559957 | None:intergenic | 55.0% | |
| GGCTGAGCGATACAAAGGTC+AGG | + | chr1.4:32561821-32561840 | MS.gene001273:CDS | 55.0% | |
| GGTTTCGAAGGCCGGACAAA+GGG | - | chr1.4:32563677-32563696 | None:intergenic | 55.0% | |
| GTGTTGTGTCCGTGGGAAGT+TGG | + | chr1.4:32562154-32562173 | MS.gene001273:CDS | 55.0% | |
| TAACGGAGGAGGCAAGCCTT+CGG | + | chr1.4:32561683-32561702 | MS.gene001273:CDS | 55.0% | |
| TGCCTTGAGATCGCTCCCAA+GGG | + | chr1.4:32560447-32560466 | MS.gene001273:intron | 55.0% | |
| TGGTTTCGAAGGCCGGACAA+AGG | - | chr1.4:32563678-32563697 | None:intergenic | 55.0% | |
| ! | ATGTTTGCTGCCTGCCGTCT+GGG | - | chr1.4:32563718-32563737 | None:intergenic | 55.0% |
| ! | CTTGAGGGAAACGCGCCTTT+TGG | + | chr1.4:32560586-32560605 | MS.gene001273:intron | 55.0% |
| ! | CTTTATCCTTGCCGACTGGC+TGG | - | chr1.4:32561629-32561648 | None:intergenic | 55.0% |
| ! | GCAGTGTGTCTGGGACATAC+AGG | - | chr1.4:32562819-32562838 | None:intergenic | 55.0% |
| !! | ACGCGCCTTTTGGAGGTCTT+AGG | + | chr1.4:32560596-32560615 | MS.gene001273:intron | 55.0% |
| !! | AGGAGGAAGGGAGGTGTCAA+TGG | - | chr1.4:32559911-32559930 | None:intergenic | 55.0% |
| !! | GCGTGGAGAAGTATTGCAGC+TGG | + | chr1.4:32563622-32563641 | MS.gene001273:CDS | 55.0% |
| !!! | CGCTATGCCTTTTCAGGTGC+TGG | + | chr1.4:32561444-32561463 | MS.gene001273:intron | 55.0% |
| !!! | GACTGGCTGGTCTTTTGGCT+TGG | - | chr1.4:32561616-32561635 | None:intergenic | 55.0% |
| !!! | TTGCCGACTGGCTGGTCTTT+TGG | - | chr1.4:32561621-32561640 | None:intergenic | 55.0% |
| AATGTGGGGGCGGAATCAGG+AGG | - | chr1.4:32559928-32559947 | None:intergenic | 60.0% | |
| CACCCTTGGGAGCGATCTCA+AGG | - | chr1.4:32560452-32560471 | None:intergenic | 60.0% | |
| CGCAATGACCGCAGTGTGTC+TGG | - | chr1.4:32562829-32562848 | None:intergenic | 60.0% | |
| CTTGAGATCGCTCCCAAGGG+TGG | + | chr1.4:32560450-32560469 | MS.gene001273:intron | 60.0% | |
| GACGCAGAGTCCGTATCAGC+AGG | + | chr1.4:32562984-32563003 | MS.gene001273:CDS | 60.0% | |
| GATTACCGCTAACGGTGGCG+TGG | - | chr1.4:32559857-32559876 | None:intergenic | 60.0% | |
| GCTATCTGGGCAGGTCTTGC+AGG | + | chr1.4:32561279-32561298 | MS.gene001273:CDS | 60.0% | |
| GGCTTGCAGTGTTGTGTCCG+TGG | + | chr1.4:32562146-32562165 | MS.gene001273:CDS | 60.0% | |
| ! | GAGGGAAACGCGCCTTTTGG+AGG | + | chr1.4:32560589-32560608 | MS.gene001273:intron | 60.0% |
| ! | GATGTTTGCTGCCTGCCGTC+TGG | - | chr1.4:32563719-32563738 | None:intergenic | 60.0% |
| ATCGCCGCATCCAAGCTCGC+CGG | + | chr1.4:32559874-32559893 | MS.gene001273:CDS | 65.0% | |
| CGTGGCGGCGGGGAAAGAAA+GGG | - | chr1.4:32559839-32559858 | None:intergenic | 65.0% | |
| GCGGCGATTACCGCTAACGG+TGG | - | chr1.4:32559862-32559881 | None:intergenic | 65.0% | |
| GGCGGAATCAGGAGGAAGGG+AGG | - | chr1.4:32559920-32559939 | None:intergenic | 65.0% | |
| GGGGGCGGAATCAGGAGGAA+GGG | - | chr1.4:32559923-32559942 | None:intergenic | 65.0% | |
| TACCGCTAACGGTGGCGTGG+CGG | - | chr1.4:32559854-32559873 | None:intergenic | 65.0% | |
| TGGGGGCGGAATCAGGAGGA+AGG | - | chr1.4:32559924-32559943 | None:intergenic | 65.0% | |
| GCGTGGCGGCGGGGAAAGAA+AGG | - | chr1.4:32559840-32559859 | None:intergenic | 70.0% | |
| CGCCGCCACGCCACCGTTAG+CGG | + | chr1.4:32559849-32559868 | MS.gene001273:CDS | 75.0% | |
| CGCTAACGGTGGCGTGGCGG+CGG | - | chr1.4:32559851-32559870 | None:intergenic | 75.0% | |
| CTAACGGTGGCGTGGCGGCG+GGG | - | chr1.4:32559849-32559868 | None:intergenic | 75.0% | |
| GCTAACGGTGGCGTGGCGGC+GGG | - | chr1.4:32559850-32559869 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 32559823 | 32563748 | 32559823 | ID=MS.gene001273 |
| chr1.4 | mRNA | 32559823 | 32563748 | 32559823 | ID=MS.gene001273.t1;Parent=MS.gene001273 |
| chr1.4 | exon | 32559823 | 32559962 | 32559823 | ID=MS.gene001273.t1.exon1;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32559823 | 32559962 | 32559823 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| chr1.4 | exon | 32560042 | 32560138 | 32560042 | ID=MS.gene001273.t1.exon2;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32560042 | 32560138 | 32560042 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| chr1.4 | exon | 32561147 | 32561300 | 32561147 | ID=MS.gene001273.t1.exon3;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32561147 | 32561300 | 32561147 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| chr1.4 | exon | 32561460 | 32562583 | 32561460 | ID=MS.gene001273.t1.exon4;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32561460 | 32562583 | 32561460 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| chr1.4 | exon | 32562747 | 32563214 | 32562747 | ID=MS.gene001273.t1.exon5;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32562747 | 32563214 | 32562747 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| chr1.4 | exon | 32563503 | 32563748 | 32563503 | ID=MS.gene001273.t1.exon6;Parent=MS.gene001273.t1 |
| chr1.4 | CDS | 32563503 | 32563748 | 32563503 | ID=cds.MS.gene001273.t1;Parent=MS.gene001273.t1 |
| Gene Sequence |
| Protein sequence |
