Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002038.t1 | XP_003592947.3 | 97.7 | 614 | 13 | 1 | 112 | 724 | 131 | 744 | 0.00E+00 | 1252.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002038.t1 | F4IH25 | 68.0 | 618 | 186 | 5 | 112 | 724 | 143 | 753 | 2.2e-259 | 896.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002038.t1 | G7INL9 | 91.5 | 657 | 12 | 2 | 112 | 724 | 131 | 787 | 0.0e+00 | 1236.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002038.t1 | MTR_2g006020 | 90.278 | 720 | 19 | 3 | 51 | 725 | 75 | 788 | 0.0 | 1286 |
MS.gene002038.t1 | MTR_2g006020 | 91.815 | 562 | 15 | 5 | 1 | 537 | 1 | 556 | 0.0 | 1028 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene002038.t1 | AT2G40360 | 66.516 | 663 | 208 | 6 | 69 | 724 | 98 | 753 | 0.0 | 917 |
MS.gene002038.t1 | AT2G40360 | 66.316 | 665 | 208 | 8 | 69 | 724 | 79 | 736 | 0.0 | 916 |
Find 182 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCTTTGTGGGATAAATTT+AGG | 0.098465 | 2.3:-75871636 | None:intergenic |
GAAAGAAAGGGAAGACAAAT+TGG | 0.200648 | 2.3:+75869243 | MS.gene002038:CDS |
CCTTGATGTCATATCCAATA+TGG | 0.214290 | 2.3:-75869204 | None:intergenic |
GCAACGTTGTTAATATCTTT+TGG | 0.217367 | 2.3:-75874683 | None:intergenic |
AGCTTTGGCTTTAAAGATTC+AGG | 0.238489 | 2.3:-75871957 | None:intergenic |
TATAAGGTTAAGGCATTTAA+AGG | 0.244291 | 2.3:+75872764 | MS.gene002038:CDS |
CTCTTGTGGGAAGATGATTT+TGG | 0.248810 | 2.3:+75871372 | MS.gene002038:CDS |
TTCAAAGTGGGAAGCTAAAA+AGG | 0.248946 | 2.3:+75871141 | MS.gene002038:CDS |
TCAATTTCTATTGAAGCTTC+AGG | 0.254166 | 2.3:+75872056 | MS.gene002038:CDS |
AAAGCTTTGTTGGTTTGATA+TGG | 0.264615 | 2.3:+75873762 | MS.gene002038:CDS |
TAAGAATCATCCTCCTTCTT+TGG | 0.272852 | 2.3:-75871348 | None:intergenic |
ACTTACTTAAGAACTTTATA+TGG | 0.279811 | 2.3:-75873799 | None:intergenic |
GCCAAAGCTTCCAAATAAAA+AGG | 0.283788 | 2.3:+75871971 | MS.gene002038:CDS |
ACCTTTGTGGGATAAATTTA+GGG | 0.287084 | 2.3:-75871635 | None:intergenic |
AAATCCTCTTATTGTTCCTT+TGG | 0.289726 | 2.3:+75874796 | MS.gene002038:CDS |
GATATGAATTAATCTCTTCT+TGG | 0.293648 | 2.3:-75871590 | None:intergenic |
TTGAAAAGTAGTCACCTTTC+CGG | 0.298992 | 2.3:-75872899 | None:intergenic |
ATGAACCTTCGTTTGGGTTC+AGG | 0.302932 | 2.3:-75871115 | None:intergenic |
TATTTGCATTGCAGGAATAT+TGG | 0.313865 | 2.3:+75875047 | MS.gene002038:intron |
CCAGTCTCATCTGATGCTTC+TGG | 0.319072 | 2.3:-75872520 | None:intergenic |
ATGATAAACACGATGGTATA+AGG | 0.329604 | 2.3:+75872748 | MS.gene002038:CDS |
TATTCGACATAGCATGTTAT+GGG | 0.352750 | 2.3:-75872008 | None:intergenic |
TGAAGGAATGAACCTTCGTT+TGG | 0.352971 | 2.3:-75871122 | None:intergenic |
ATATTCGACATAGCATGTTA+TGG | 0.356240 | 2.3:-75872009 | None:intergenic |
AAAAGATAAAGAAGAAAGAA+AGG | 0.359734 | 2.3:+75869230 | MS.gene002038:CDS |
TCAGGGCAGTGGATGGCTTC+AGG | 0.362455 | 2.3:+75872074 | MS.gene002038:CDS |
TGTAAATAACCAGGGTTGCC+TGG | 0.363124 | 2.3:-75875085 | None:intergenic |
AGAAGAACACCAAAGGATTA+AGG | 0.365556 | 2.3:+75872477 | MS.gene002038:CDS |
ACATGCTATGTCGAATATAA+AGG | 0.367363 | 2.3:+75872014 | MS.gene002038:CDS |
GCACCAAAGCAGAAACTTCC+TGG | 0.381658 | 2.3:+75871432 | MS.gene002038:CDS |
AGCTAATAAATCAACAATAA+AGG | 0.381708 | 2.3:-75872941 | None:intergenic |
CGGGGCCATGCAAATTCAAA+TGG | 0.388895 | 2.3:+75874827 | MS.gene002038:CDS |
GAATTAATCTCTTCTTGGGT+TGG | 0.389942 | 2.3:-75871585 | None:intergenic |
AGAGAAGCTCCTTAATCCTT+TGG | 0.391671 | 2.3:-75872486 | None:intergenic |
GCGCAAACTAATGCAGAATA+AGG | 0.393235 | 2.3:+75870894 | MS.gene002038:CDS |
ATATGAATTAATCTCTTCTT+GGG | 0.401613 | 2.3:-75871589 | None:intergenic |
ATCATCAACATTTGCAAGAA+AGG | 0.402378 | 2.3:-75869269 | None:intergenic |
TTGTTCCTTTGGAAATTCTA+CGG | 0.403370 | 2.3:+75874807 | MS.gene002038:CDS |
CAACCCTGGTTATTTACAGC+TGG | 0.404320 | 2.3:+75875090 | MS.gene002038:CDS |
GTGATGGAACTGTCCGTGTC+TGG | 0.404605 | 2.3:+75872184 | MS.gene002038:CDS |
CTCTCCCATTTGAATTTGCA+TGG | 0.409359 | 2.3:-75874832 | None:intergenic |
GACAAAAGATGAAATCAAAA+TGG | 0.410244 | 2.3:+75870870 | MS.gene002038:CDS |
ATTTCCAAAGGAACAATAAG+AGG | 0.410944 | 2.3:-75874800 | None:intergenic |
CTTGATGTCATATCCAATAT+GGG | 0.413782 | 2.3:-75869203 | None:intergenic |
ATACCAGGAAGTTTCTGCTT+TGG | 0.424563 | 2.3:-75871435 | None:intergenic |
ATGTTGATGATTCTAAGAAT+TGG | 0.428284 | 2.3:+75869281 | MS.gene002038:CDS |
ACATAGCATGTTATGGGGTA+AGG | 0.430555 | 2.3:-75872002 | None:intergenic |
GAAGGAATGAACCTTCGTTT+GGG | 0.436375 | 2.3:-75871121 | None:intergenic |
GTGAGAGTTTCTTGGACAAC+TGG | 0.437387 | 2.3:-75873422 | None:intergenic |
TTCCTCTTTCTTCTTCATCT+CGG | 0.439715 | 2.3:-75868105 | None:intergenic |
GAAGCTGACCTCCTCGTCTT+GGG | 0.442155 | 2.3:-75868430 | None:intergenic |
TTAATTGTGGGGAGCAAAGA+AGG | 0.442713 | 2.3:+75873739 | MS.gene002038:CDS |
GCAAAGAAGGAAAGCTTTGT+TGG | 0.443901 | 2.3:+75873752 | MS.gene002038:CDS |
TGTTCCTTTGGAAATTCTAC+GGG | 0.444924 | 2.3:+75874808 | MS.gene002038:CDS |
TATGAGGATGAACCCCATAT+TGG | 0.445423 | 2.3:+75869190 | MS.gene002038:CDS |
GTAAATAACCAGGGTTGCCT+GGG | 0.445737 | 2.3:-75875084 | None:intergenic |
CGTGTCTGGGAGGTTGAAAC+TGG | 0.447803 | 2.3:+75872198 | MS.gene002038:CDS |
CTGGCAGATGTCTGAGACAG+TGG | 0.448817 | 2.3:+75872217 | MS.gene002038:CDS |
AACACGATGGTATAAGGTTA+AGG | 0.454384 | 2.3:+75872754 | MS.gene002038:CDS |
CTTTGTACAAATAAAGAAGA+TGG | 0.456986 | 2.3:-75873505 | None:intergenic |
ATTATGTTGAGTGGTTCAAA+TGG | 0.460094 | 2.3:+75871062 | MS.gene002038:CDS |
TTCTGACTTTGATCCACATC+CGG | 0.460539 | 2.3:+75870924 | MS.gene002038:CDS |
AAACTTCCTTTCAAGTTACA+TGG | 0.460764 | 2.3:+75873447 | MS.gene002038:CDS |
AAAGATAAAGAAGAAAGAAA+GGG | 0.466560 | 2.3:+75869231 | MS.gene002038:CDS |
GGATGATTCTTATCTCTTGT+GGG | 0.469629 | 2.3:+75871359 | MS.gene002038:CDS |
TGAAAGCTCCGATCTTCATC+AGG | 0.471911 | 2.3:+75868986 | MS.gene002038:CDS |
GGAAGTTTCTGCTTTGGTGC+AGG | 0.474613 | 2.3:-75871429 | None:intergenic |
GCAGGTGATAATTTAATTGT+GGG | 0.476821 | 2.3:+75873727 | MS.gene002038:intron |
CTTCTGTTAAACACTGGCTT+GGG | 0.477526 | 2.3:+75872448 | MS.gene002038:CDS |
TGGGTTGGAATATACTCTAA+AGG | 0.478484 | 2.3:-75871570 | None:intergenic |
TGAAGCTGACCTCCTCGTCT+TGG | 0.479040 | 2.3:-75868431 | None:intergenic |
CAATTTCTATTGAAGCTTCA+GGG | 0.480377 | 2.3:+75872057 | MS.gene002038:CDS |
AGGATGATTCTTATCTCTTG+TGG | 0.482043 | 2.3:+75871358 | MS.gene002038:CDS |
TCGTCAATTGCAGTCCATCC+TGG | 0.485324 | 2.3:+75873600 | MS.gene002038:CDS |
TGCAGGTGATAATTTAATTG+TGG | 0.485837 | 2.3:+75873726 | MS.gene002038:intron |
CTATTGAAGCTTCAGGGCAG+TGG | 0.486682 | 2.3:+75872063 | MS.gene002038:CDS |
AAGTAAATACAGACCGGATG+TGG | 0.489461 | 2.3:-75870937 | None:intergenic |
TTCTTGATCATTTAGGCGGA+AGG | 0.494928 | 2.3:+75870813 | MS.gene002038:intron |
AACCCTGGTTATTTACAGCT+GGG | 0.495621 | 2.3:+75875091 | MS.gene002038:CDS |
AAGCTGTGAACTGTGTTACT+TGG | 0.496069 | 2.3:+75872250 | MS.gene002038:CDS |
CAGGTTGTGCAGTATGTTAG+AGG | 0.496768 | 2.3:+75871294 | MS.gene002038:intron |
TTGATGTAACTGCACCTTTG+TGG | 0.502294 | 2.3:-75872037 | None:intergenic |
GTCATCGGAGTCGTCGTCAT+CGG | 0.502887 | 2.3:-75868159 | None:intergenic |
AAAGAAAGGGAAGACAAATT+GGG | 0.504818 | 2.3:+75869244 | MS.gene002038:CDS |
ATGAAAGCACAGTACCTTTG+TGG | 0.506407 | 2.3:-75871648 | None:intergenic |
TGCGTTAGACAATGGATGCT+TGG | 0.512917 | 2.3:-75871092 | None:intergenic |
ATCTGAGCACGAAGCAAACA+AGG | 0.519889 | 2.3:-75874723 | None:intergenic |
TCATCCTCATACCACTTCAA+AGG | 0.523812 | 2.3:-75869178 | None:intergenic |
ACTTCTGTTAAACACTGGCT+TGG | 0.523923 | 2.3:+75872447 | MS.gene002038:CDS |
TTCATAGCATTGTCATACGC+AGG | 0.524375 | 2.3:-75871753 | None:intergenic |
TGCGTATGACAATGCTATGA+AGG | 0.524552 | 2.3:+75871755 | MS.gene002038:CDS |
AGCCCCAGCTGTAAATAACC+AGG | 0.525330 | 2.3:-75875094 | None:intergenic |
CCATATTGGATATGACATCA+AGG | 0.525475 | 2.3:+75869204 | MS.gene002038:CDS |
CATCCTCATACCACTTCAAA+GGG | 0.526557 | 2.3:-75869177 | None:intergenic |
ACCTCTCCAATGGTATTTCG+AGG | 0.527431 | 2.3:-75869154 | None:intergenic |
CTTTATATGGTTTAGACGAA+AGG | 0.531394 | 2.3:-75873786 | None:intergenic |
GGTCCCTTTGAAGTGGTATG+AGG | 0.533326 | 2.3:+75869174 | MS.gene002038:CDS |
TGACGAGGCTTCTTTGAGAC+CGG | 0.534532 | 2.3:-75873583 | None:intergenic |
TGAAAGCACAGTACCTTTGT+GGG | 0.534624 | 2.3:-75871647 | None:intergenic |
GAGGATTATATGACTCATCA+TGG | 0.537199 | 2.3:-75871548 | None:intergenic |
ATTGTAGGACGTTGTTGACT+CGG | 0.538023 | 2.3:+75868953 | MS.gene002038:intron |
TGTCTGAGACAGTGGGAGAT+TGG | 0.541054 | 2.3:+75872225 | MS.gene002038:CDS |
TCTTTAAGCCAGCGTACACT+AGG | 0.542961 | 2.3:-75872726 | None:intergenic |
TCCTCCTTCCTGATGAAGAT+CGG | 0.543589 | 2.3:-75868994 | None:intergenic |
CATGCAGAATGTTACTTCTG+TGG | 0.543641 | 2.3:+75872869 | MS.gene002038:intron |
GAGTGATTCATCTGAGGATG+AGG | 0.544074 | 2.3:+75869025 | MS.gene002038:CDS |
AGAAGATGGAACGAGATGGA+TGG | 0.545362 | 2.3:-75873491 | None:intergenic |
AGTTTCACCCCAGGCAACCC+TGG | 0.550056 | 2.3:+75875076 | MS.gene002038:CDS |
GGAAACTTCAACACTGTCAT+CGG | 0.555060 | 2.3:-75868174 | None:intergenic |
GGTTCAGGTGCGTTAGACAA+TGG | 0.557218 | 2.3:-75871100 | None:intergenic |
GCAAGTCCATGTAACTTGAA+AGG | 0.563238 | 2.3:-75873453 | None:intergenic |
CAAGGGATATGAACGATGAA+AGG | 0.563278 | 2.3:-75874705 | None:intergenic |
GTGGCTCCTCGAAATACCAT+TGG | 0.564896 | 2.3:+75869148 | MS.gene002038:CDS |
GGGGCCATGCAAATTCAAAT+GGG | 0.565061 | 2.3:+75874828 | MS.gene002038:CDS |
TTACTTCTGTGGAATGGCAC+CGG | 0.567545 | 2.3:+75872880 | MS.gene002038:CDS |
TGAAGCTTCAGGGCAGTGGA+TGG | 0.570556 | 2.3:+75872067 | MS.gene002038:CDS |
CCAGAAGCATCAGATGAGAC+TGG | 0.571285 | 2.3:+75872520 | MS.gene002038:CDS |
CAACAATAAAGGATATCCGC+TGG | 0.574591 | 2.3:-75872930 | None:intergenic |
GATGGAACGAGATGGATGGA+AGG | 0.576040 | 2.3:-75873487 | None:intergenic |
ACCCTGGTTATTTACAGCTG+GGG | 0.577398 | 2.3:+75875092 | MS.gene002038:CDS |
TTATGTTGAGTGGTTCAAAT+GGG | 0.579837 | 2.3:+75871063 | MS.gene002038:CDS |
CATATTGGATATGACATCAA+GGG | 0.580562 | 2.3:+75869205 | MS.gene002038:CDS |
TCATGATCAGATGGAGGCGG+CGG | 0.582878 | 2.3:-75868131 | None:intergenic |
GAAGGTTCATTCCTTCAAAG+TGG | 0.585876 | 2.3:+75871128 | MS.gene002038:CDS |
AAGGTTCATTCCTTCAAAGT+GGG | 0.586722 | 2.3:+75871129 | MS.gene002038:CDS |
TCTGTCTGATATTCATATTG+TGG | 0.589903 | 2.3:+75872278 | MS.gene002038:CDS |
ACTACTACTCATCATCATCA+TGG | 0.590139 | 2.3:+75868387 | MS.gene002038:CDS |
TCGGAATCATCATGATCAGA+TGG | 0.590859 | 2.3:-75868140 | None:intergenic |
TGGACTGCAAGTTTCACCCC+AGG | 0.591777 | 2.3:+75875067 | MS.gene002038:CDS |
GATGTACTTCTGTTAAACAC+TGG | 0.592024 | 2.3:+75872442 | MS.gene002038:CDS |
TGAGTACAATGATGAGGAAG+TGG | 0.592725 | 2.3:+75870843 | MS.gene002038:CDS |
TTGGAGAGGTCCCTTTGAAG+TGG | 0.595478 | 2.3:+75869167 | MS.gene002038:CDS |
TGATGGAACTGTCCGTGTCT+GGG | 0.597835 | 2.3:+75872185 | MS.gene002038:CDS |
GATCTTCATCAGGAAGGAGG+AGG | 0.602770 | 2.3:+75868996 | MS.gene002038:CDS |
TCTGAATTAGAACATGAAGA+AGG | 0.606241 | 2.3:+75868345 | MS.gene002038:CDS |
GACGTTGTTGACTCGGAAGG+TGG | 0.608124 | 2.3:+75868960 | MS.gene002038:CDS |
TAGGACGTTGTTGACTCGGA+AGG | 0.610553 | 2.3:+75868957 | MS.gene002038:intron |
CATGCAAATTCAAATGGGAG+AGG | 0.611790 | 2.3:+75874833 | MS.gene002038:CDS |
AGCCGAGATGAAGAAGAAAG+AGG | 0.612426 | 2.3:+75868103 | MS.gene002038:CDS |
CTTCAAAGGGACCTCTCCAA+TGG | 0.612908 | 2.3:-75869164 | None:intergenic |
TAATAACAATACCTCCAGGA+TGG | 0.614469 | 2.3:-75873614 | None:intergenic |
TCATCATGATCAGATGGAGG+CGG | 0.614782 | 2.3:-75868134 | None:intergenic |
ATAAAGAAGATGGAACGAGA+TGG | 0.615602 | 2.3:-75873495 | None:intergenic |
TCTGTGGAATGGCACCGGAA+AGG | 0.618310 | 2.3:+75872885 | MS.gene002038:CDS |
TCATAGCATTGTCATACGCA+GGG | 0.620700 | 2.3:-75871752 | None:intergenic |
AAACCAGACTTACGCAGAGA+CGG | 0.621759 | 2.3:-75872301 | None:intergenic |
GTCGAATATAAAGGCCACAA+AGG | 0.623866 | 2.3:+75872023 | MS.gene002038:CDS |
TGGCAGATGTCTGAGACAGT+GGG | 0.626311 | 2.3:+75872218 | MS.gene002038:CDS |
CAGTTTCAACCTCCCAGACA+CGG | 0.626919 | 2.3:-75872197 | None:intergenic |
AGCTCCGATCTTCATCAGGA+AGG | 0.628030 | 2.3:+75868990 | MS.gene002038:CDS |
TATGTTAGAGGAATTCGCAA+TGG | 0.631262 | 2.3:+75871306 | MS.gene002038:CDS |
CAGGTGATAATTTAATTGTG+GGG | 0.633645 | 2.3:+75873728 | MS.gene002038:intron |
GTTGGAATATACTCTAAAGG+AGG | 0.636366 | 2.3:-75871567 | None:intergenic |
TCCGATCTTCATCAGGAAGG+AGG | 0.636888 | 2.3:+75868993 | MS.gene002038:CDS |
ATATTGGATATGACATCAAG+GGG | 0.637046 | 2.3:+75869206 | MS.gene002038:CDS |
TCCTCGAAATACCATTGGAG+AGG | 0.637496 | 2.3:+75869153 | MS.gene002038:CDS |
CAATTCTGACTCCCAAGACG+AGG | 0.643332 | 2.3:+75868419 | MS.gene002038:CDS |
AGAAAGCACCTAGTGTACGC+TGG | 0.647760 | 2.3:+75872718 | MS.gene002038:CDS |
ATTCGACATAGCATGTTATG+GGG | 0.653568 | 2.3:-75872007 | None:intergenic |
TTGGGAGTCAGAATTGTCGT+CGG | 0.654239 | 2.3:-75868412 | None:intergenic |
TTCTGACTCCCAAGACGAGG+AGG | 0.656012 | 2.3:+75868422 | MS.gene002038:CDS |
TTGATGTCATATCCAATATG+GGG | 0.658360 | 2.3:-75869202 | None:intergenic |
CTTTGATGAGTACAATGATG+AGG | 0.661806 | 2.3:+75870837 | MS.gene002038:CDS |
ATGTGCAGGATTATGTTGAG+TGG | 0.665536 | 2.3:+75871053 | MS.gene002038:intron |
CTTAAAGATGATAAACACGA+TGG | 0.672298 | 2.3:+75872741 | MS.gene002038:CDS |
AGGATGGACTGCAATTGACG+AGG | 0.675101 | 2.3:-75873598 | None:intergenic |
AGAATGTTACTTCTGTGGAA+TGG | 0.676838 | 2.3:+75872874 | MS.gene002038:intron |
GAATCATCATGATCAGATGG+AGG | 0.677781 | 2.3:-75868137 | None:intergenic |
TGCTGAGAGTGATTCATCTG+AGG | 0.679468 | 2.3:+75869019 | MS.gene002038:CDS |
GTGATGAAGAAGAACACCAA+AGG | 0.681959 | 2.3:+75872470 | MS.gene002038:CDS |
GCCCCAGCTGTAAATAACCA+GGG | 0.684465 | 2.3:-75875093 | None:intergenic |
ACAATATGAATATCAGACAG+AGG | 0.684612 | 2.3:-75872276 | None:intergenic |
TGGCCCCGTAGAATTTCCAA+AGG | 0.689804 | 2.3:-75874812 | None:intergenic |
TAAATAACCAGGGTTGCCTG+GGG | 0.690591 | 2.3:-75875083 | None:intergenic |
ACGCACCTGAACCCAAACGA+AGG | 0.697236 | 2.3:+75871110 | MS.gene002038:CDS |
GCCCTAAATTTATCCCACAA+AGG | 0.699342 | 2.3:+75871634 | MS.gene002038:CDS |
TTTGTGGGATAAATTTAGGG+CGG | 0.703720 | 2.3:-75871632 | None:intergenic |
TCTGAGCACGAAGCAAACAA+GGG | 0.712455 | 2.3:-75874722 | None:intergenic |
TGTGGATCAAAGTCAGAATG+TGG | 0.716263 | 2.3:-75870919 | None:intergenic |
TGGAACTGTCCGTGTCTGGG+AGG | 0.720097 | 2.3:+75872188 | MS.gene002038:CDS |
TCAATTGCAGTCCATCCTGG+AGG | 0.730857 | 2.3:+75873603 | MS.gene002038:CDS |
GTTCCTTTGGAAATTCTACG+GGG | 0.734441 | 2.3:+75874809 | MS.gene002038:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 75868080 | 75875149 | 75868080 | ID=MS.gene002038 |
chr2.3 | mRNA | 75868080 | 75875149 | 75868080 | ID=MS.gene002038.t1;Parent=MS.gene002038 |
chr2.3 | exon | 75868080 | 75868190 | 75868080 | ID=MS.gene002038.t1.exon1;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75868080 | 75868190 | 75868080 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75868309 | 75868443 | 75868309 | ID=MS.gene002038.t1.exon2;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75868309 | 75868443 | 75868309 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75868960 | 75869046 | 75868960 | ID=MS.gene002038.t1.exon3;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75868960 | 75869046 | 75868960 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75869148 | 75869302 | 75869148 | ID=MS.gene002038.t1.exon4;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75869148 | 75869302 | 75869148 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75870828 | 75870945 | 75870828 | ID=MS.gene002038.t1.exon5;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75870828 | 75870945 | 75870828 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75871061 | 75871162 | 75871061 | ID=MS.gene002038.t1.exon6;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75871061 | 75871162 | 75871061 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75871297 | 75871453 | 75871297 | ID=MS.gene002038.t1.exon7;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75871297 | 75871453 | 75871297 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75871547 | 75871655 | 75871547 | ID=MS.gene002038.t1.exon8;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75871547 | 75871655 | 75871547 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75871731 | 75871833 | 75871731 | ID=MS.gene002038.t1.exon9;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75871731 | 75871833 | 75871731 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75871945 | 75872095 | 75871945 | ID=MS.gene002038.t1.exon10;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75871945 | 75872095 | 75871945 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75872178 | 75872310 | 75872178 | ID=MS.gene002038.t1.exon11;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75872178 | 75872310 | 75872178 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75872435 | 75872541 | 75872435 | ID=MS.gene002038.t1.exon12;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75872435 | 75872541 | 75872435 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75872715 | 75872785 | 75872715 | ID=MS.gene002038.t1.exon13;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75872715 | 75872785 | 75872715 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75872876 | 75872948 | 75872876 | ID=MS.gene002038.t1.exon14;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75872876 | 75872948 | 75872876 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75873412 | 75873624 | 75873412 | ID=MS.gene002038.t1.exon15;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75873412 | 75873624 | 75873412 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75873731 | 75873815 | 75873731 | ID=MS.gene002038.t1.exon16;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75873731 | 75873815 | 75873731 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75874676 | 75874854 | 75874676 | ID=MS.gene002038.t1.exon17;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75874676 | 75874854 | 75874676 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
chr2.3 | exon | 75875061 | 75875149 | 75875061 | ID=MS.gene002038.t1.exon18;Parent=MS.gene002038.t1 |
chr2.3 | CDS | 75875061 | 75875149 | 75875061 | ID=cds.MS.gene002038.t1;Parent=MS.gene002038.t1 |
Gene Sequence |
Protein sequence |