Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00612.t1 | XP_003592947.3 | 98.4 | 614 | 9 | 1 | 116 | 728 | 131 | 744 | 0.00E+00 | 1258.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00612.t1 | F4IH25 | 68.0 | 618 | 186 | 5 | 116 | 728 | 143 | 753 | 7.5e-260 | 897.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00612.t1 | G7INL9 | 92.1 | 657 | 8 | 2 | 116 | 728 | 131 | 787 | 0.0e+00 | 1242.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00612.t1 | MTR_2g006020 | 88.777 | 793 | 20 | 8 | 1 | 729 | 1 | 788 | 0.0 | 1394 |
MS.gene00612.t1 | MTR_2g006020 | 92.870 | 561 | 15 | 6 | 1 | 541 | 1 | 556 | 0.0 | 1033 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00612.t1 | AT2G40360 | 66.516 | 663 | 208 | 6 | 73 | 728 | 98 | 753 | 0.0 | 920 |
MS.gene00612.t1 | AT2G40360 | 64.235 | 699 | 235 | 7 | 38 | 728 | 45 | 736 | 0.0 | 920 |
Find 181 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCTTTGTGGGATAAATTT+AGG | 0.098465 | 2.1:-75847302 | None:intergenic |
GAAAGAAAGGGAAGACAAAT+TGG | 0.200648 | 2.1:+75844853 | MS.gene00612:CDS |
CCTTGATGTCATATCCAATA+TGG | 0.214290 | 2.1:-75844814 | None:intergenic |
ACAACGTTGTTAATATCTTT+TGG | 0.224398 | 2.1:-75850395 | None:intergenic |
AGCTTTGGCTTTAAAGATTC+AGG | 0.238489 | 2.1:-75847669 | None:intergenic |
TATAAGGTTAAGGCATTTAA+AGG | 0.244291 | 2.1:+75848476 | MS.gene00612:CDS |
TCAATTTCTATTGAAGCTTC+AGG | 0.254166 | 2.1:+75847768 | MS.gene00612:CDS |
AAAGCTTTGTTGGTTTGATA+TGG | 0.264615 | 2.1:+75849474 | MS.gene00612:CDS |
TAAGAATCATCCTCCTTCTT+TGG | 0.272852 | 2.1:-75847014 | None:intergenic |
ACTTACTTAAGAACTTTATA+TGG | 0.279811 | 2.1:-75849511 | None:intergenic |
GCCAAAGCTTCCAAATAAAA+AGG | 0.283788 | 2.1:+75847683 | MS.gene00612:CDS |
ACCTTTGTGGGATAAATTTA+GGG | 0.287084 | 2.1:-75847301 | None:intergenic |
AAATCCTCTTATTGTTCCTT+TGG | 0.289726 | 2.1:+75850508 | MS.gene00612:CDS |
TTCAAAGTGGGAAGCTAAAA+AGG | 0.292304 | 2.1:+75846807 | MS.gene00612:CDS |
CTCTTGTGGGAAGATGATTC+TGG | 0.293595 | 2.1:+75847038 | MS.gene00612:CDS |
GATATGAATTAATCTCTTCT+TGG | 0.293648 | 2.1:-75847256 | None:intergenic |
TTGAAAAGTAGTCACCTTTC+CGG | 0.298992 | 2.1:-75848611 | None:intergenic |
ATGAACCTTCGTTTGGGTTC+GGG | 0.309674 | 2.1:-75846781 | None:intergenic |
TATTTGCATTGCAGGAATAT+TGG | 0.313865 | 2.1:+75850759 | MS.gene00612:intron |
CCAGTCTCATCTGATGCTTC+TGG | 0.319072 | 2.1:-75848232 | None:intergenic |
ATGATAAACACGATGGTATA+AGG | 0.329604 | 2.1:+75848460 | MS.gene00612:CDS |
TATTCGATATAGCATGTTAT+GGG | 0.338942 | 2.1:-75847720 | None:intergenic |
CTTCTGTTCAACACTGGTTT+GGG | 0.343502 | 2.1:+75848160 | MS.gene00612:CDS |
AGAAGAACAGCAAAGGATTA+AGG | 0.351258 | 2.1:+75848189 | MS.gene00612:CDS |
TGAAGGAATGAACCTTCGTT+TGG | 0.352971 | 2.1:-75846788 | None:intergenic |
ATATTCGATATAGCATGTTA+TGG | 0.356240 | 2.1:-75847721 | None:intergenic |
AAAAGATAAAGAAGAAAGAA+AGG | 0.359734 | 2.1:+75844840 | MS.gene00612:CDS |
TCAGGGCAGTGGATGGCTTC+AGG | 0.362455 | 2.1:+75847786 | MS.gene00612:CDS |
TGTAAATAACCAGGGTTGCC+TGG | 0.363124 | 2.1:-75850797 | None:intergenic |
ACTTCTGTTCAACACTGGTT+TGG | 0.364653 | 2.1:+75848159 | MS.gene00612:CDS |
AATGAACCTTCGTTTGGGTT+CGG | 0.364933 | 2.1:-75846782 | None:intergenic |
ACATGCTATATCGAATATAA+AGG | 0.374460 | 2.1:+75847726 | MS.gene00612:CDS |
GCACCAAAGCAGAAACTTCC+TGG | 0.381658 | 2.1:+75847098 | MS.gene00612:CDS |
AGCTAATAAATCAACAATAA+AGG | 0.381708 | 2.1:-75848653 | None:intergenic |
TTGATGTAACTGCACCTTCA+TGG | 0.388375 | 2.1:-75847749 | None:intergenic |
CGGGGCCATGCAAATTCAAA+TGG | 0.388895 | 2.1:+75850539 | MS.gene00612:CDS |
GAATTAATCTCTTCTTGGGT+TGG | 0.389942 | 2.1:-75847251 | None:intergenic |
GCGCAAACTAATGCAGAATA+AGG | 0.393235 | 2.1:+75846560 | MS.gene00612:CDS |
ATATGAATTAATCTCTTCTT+GGG | 0.401613 | 2.1:-75847255 | None:intergenic |
ATCATCAACATTTGCAAGAA+AGG | 0.402378 | 2.1:-75844879 | None:intergenic |
TTGTTCCTTTGGAAATTCTA+CGG | 0.403370 | 2.1:+75850519 | MS.gene00612:CDS |
CAACCCTGGTTATTTACAGC+TGG | 0.404320 | 2.1:+75850802 | MS.gene00612:CDS |
GTGATGGAACTGTCCGTGTC+TGG | 0.404605 | 2.1:+75847896 | MS.gene00612:CDS |
CTCTCCCATTTGAATTTGCA+TGG | 0.409359 | 2.1:-75850544 | None:intergenic |
GACAAAAGATGAAATCAAAA+TGG | 0.410244 | 2.1:+75846536 | MS.gene00612:CDS |
ATTTCCAAAGGAACAATAAG+AGG | 0.410944 | 2.1:-75850512 | None:intergenic |
CTTGATGTCATATCCAATAT+GGG | 0.413782 | 2.1:-75844813 | None:intergenic |
ATACCAGGAAGTTTCTGCTT+TGG | 0.424563 | 2.1:-75847101 | None:intergenic |
ATGTTGATGATTCTAAGAAT+TGG | 0.428284 | 2.1:+75844891 | MS.gene00612:CDS |
GAAGGAATGAACCTTCGTTT+GGG | 0.436375 | 2.1:-75846787 | None:intergenic |
GTGAGAGTTTCTTGGACAAC+TGG | 0.437387 | 2.1:-75849134 | None:intergenic |
TTCCTCTTTCTTCTTCATCT+CGG | 0.439715 | 2.1:-75843629 | None:intergenic |
ATATAGCATGTTATGGGGTA+AGG | 0.441338 | 2.1:-75847714 | None:intergenic |
GAAGCTGACCTCCTCGTCTT+GGG | 0.442155 | 2.1:-75843966 | None:intergenic |
TTAATTGTGGGGAGCAAAGA+AGG | 0.442713 | 2.1:+75849451 | MS.gene00612:CDS |
GCAAAGAAGGAAAGCTTTGT+TGG | 0.443901 | 2.1:+75849464 | MS.gene00612:CDS |
TGTTCCTTTGGAAATTCTAC+GGG | 0.444924 | 2.1:+75850520 | MS.gene00612:CDS |
TATGAGGATGAACCCCATAT+TGG | 0.445423 | 2.1:+75844800 | MS.gene00612:CDS |
GTAAATAACCAGGGTTGCCT+GGG | 0.445737 | 2.1:-75850796 | None:intergenic |
CGTGTCTGGGAGGTTGAAAC+TGG | 0.447803 | 2.1:+75847910 | MS.gene00612:CDS |
CTGGCAGATGTCTGAGACAG+TGG | 0.448817 | 2.1:+75847929 | MS.gene00612:CDS |
AACACGATGGTATAAGGTTA+AGG | 0.454384 | 2.1:+75848466 | MS.gene00612:CDS |
CTTTGTACAAATAAAGAAGA+TGG | 0.456986 | 2.1:-75849217 | None:intergenic |
ATTATGTTGAGTGGTTCAAA+TGG | 0.460094 | 2.1:+75846728 | MS.gene00612:CDS |
TTCTGACTTTGATCCACATC+CGG | 0.460539 | 2.1:+75846590 | MS.gene00612:CDS |
AAACTTCCTTTCAAGTTACA+TGG | 0.460764 | 2.1:+75849159 | MS.gene00612:CDS |
AAAGATAAAGAAGAAAGAAA+GGG | 0.466560 | 2.1:+75844841 | MS.gene00612:CDS |
GGATGATTCTTATCTCTTGT+GGG | 0.469629 | 2.1:+75847025 | MS.gene00612:CDS |
TGAAAGCTCCGATCTTCATC+AGG | 0.471911 | 2.1:+75844596 | MS.gene00612:CDS |
GGAAGTTTCTGCTTTGGTGC+AGG | 0.474613 | 2.1:-75847095 | None:intergenic |
GCAGGTGATAATTTAATTGT+GGG | 0.476821 | 2.1:+75849439 | MS.gene00612:intron |
TGGGTTGGAATATACTCTAA+AGG | 0.478484 | 2.1:-75847236 | None:intergenic |
TGAAGCTGACCTCCTCGTCT+TGG | 0.479040 | 2.1:-75843967 | None:intergenic |
CAATTTCTATTGAAGCTTCA+GGG | 0.480377 | 2.1:+75847769 | MS.gene00612:CDS |
AGGATGATTCTTATCTCTTG+TGG | 0.482043 | 2.1:+75847024 | MS.gene00612:CDS |
TCGTCAATTGCAGTCCATCC+TGG | 0.485324 | 2.1:+75849312 | MS.gene00612:CDS |
TGCAGGTGATAATTTAATTG+TGG | 0.485837 | 2.1:+75849438 | MS.gene00612:intron |
CTATTGAAGCTTCAGGGCAG+TGG | 0.486682 | 2.1:+75847775 | MS.gene00612:CDS |
AAGTAAATACAGACCGGATG+TGG | 0.489461 | 2.1:-75846603 | None:intergenic |
TTCTTGATCATTTAGGCGGA+AGG | 0.494928 | 2.1:+75846479 | MS.gene00612:intron |
AACCCTGGTTATTTACAGCT+GGG | 0.495621 | 2.1:+75850803 | MS.gene00612:CDS |
AAGCTGTGAACTGTGTTACT+TGG | 0.496069 | 2.1:+75847962 | MS.gene00612:CDS |
CAGGTTGTGCAGTATGTTAG+AGG | 0.496768 | 2.1:+75846960 | MS.gene00612:intron |
GTCATCGGAGTCGTCGTCAT+CGG | 0.502887 | 2.1:-75843680 | None:intergenic |
AAAGAAAGGGAAGACAAATT+GGG | 0.504818 | 2.1:+75844854 | MS.gene00612:CDS |
ATGAAAGCACAGTACCTTTG+TGG | 0.506407 | 2.1:-75847314 | None:intergenic |
TGCGTTAGACAATGGATGCT+TGG | 0.517477 | 2.1:-75846758 | None:intergenic |
ATCTGAGCACGAAGCAAACA+AGG | 0.519889 | 2.1:-75850435 | None:intergenic |
TCATCCTCATACCACTTCAA+AGG | 0.523812 | 2.1:-75844788 | None:intergenic |
TTCATAGCATTGTCATACGC+AGG | 0.524375 | 2.1:-75847419 | None:intergenic |
TGCGTATGACAATGCTATGA+AGG | 0.524552 | 2.1:+75847421 | MS.gene00612:CDS |
AGCCCCAGCTGTAAATAACC+AGG | 0.525330 | 2.1:-75850806 | None:intergenic |
CCATATTGGATATGACATCA+AGG | 0.525475 | 2.1:+75844814 | MS.gene00612:CDS |
CATCCTCATACCACTTCAAA+GGG | 0.526557 | 2.1:-75844787 | None:intergenic |
ACCTCTCCAATGGTATTTCG+AGG | 0.527431 | 2.1:-75844764 | None:intergenic |
ATTGTAGGACGTTGATGACT+CGG | 0.530821 | 2.1:+75844563 | MS.gene00612:intron |
CTTTATATGGTTTAGACGAA+AGG | 0.531394 | 2.1:-75849498 | None:intergenic |
GGTCCCTTTGAAGTGGTATG+AGG | 0.533326 | 2.1:+75844784 | MS.gene00612:CDS |
TGACGAGGCTTCTTTGAGAC+CGG | 0.534532 | 2.1:-75849295 | None:intergenic |
TGAAAGCACAGTACCTTTGT+GGG | 0.534624 | 2.1:-75847313 | None:intergenic |
GGTTCGGGTGCGTTAGACAA+TGG | 0.536640 | 2.1:-75846766 | None:intergenic |
GAGGATTATATGACTCATCA+TGG | 0.537199 | 2.1:-75847214 | None:intergenic |
TGTCTGAGACAGTGGGAGAT+TGG | 0.541054 | 2.1:+75847937 | MS.gene00612:CDS |
ATCGAATATAAAGGCCATGA+AGG | 0.541999 | 2.1:+75847735 | MS.gene00612:CDS |
TCTTTAAGCCAGCGTACACT+AGG | 0.542961 | 2.1:-75848438 | None:intergenic |
TCCTCCTTCCTGATGAAGAT+CGG | 0.543589 | 2.1:-75844604 | None:intergenic |
CATGCAGAATGTTACTTCTG+TGG | 0.543641 | 2.1:+75848581 | MS.gene00612:intron |
GAGTGATTCATCTGAGGATG+AGG | 0.544074 | 2.1:+75844635 | MS.gene00612:CDS |
AGAAGATGGAACGAGATGGA+TGG | 0.545362 | 2.1:-75849203 | None:intergenic |
AGTTTCACCCCAGGCAACCC+TGG | 0.550056 | 2.1:+75850788 | MS.gene00612:CDS |
GGAAACTTCAACACTGTCAT+CGG | 0.555060 | 2.1:-75843695 | None:intergenic |
TCTGAATTAGAACATGAAGA+AGG | 0.558879 | 2.1:+75843884 | MS.gene00612:CDS |
GCAAGTCCATGTAACTTGAA+AGG | 0.563238 | 2.1:-75849165 | None:intergenic |
GTGGCTCCTCGAAATACCAT+TGG | 0.564896 | 2.1:+75844758 | MS.gene00612:CDS |
GGGGCCATGCAAATTCAAAT+GGG | 0.565061 | 2.1:+75850540 | MS.gene00612:CDS |
TCATGATCAGATGGAGGCGG+CGG | 0.566388 | 2.1:-75843655 | None:intergenic |
TTACTTCTGTGGAATGGCAC+CGG | 0.567545 | 2.1:+75848592 | MS.gene00612:CDS |
TGAAGCTTCAGGGCAGTGGA+TGG | 0.570556 | 2.1:+75847779 | MS.gene00612:CDS |
CCAGAAGCATCAGATGAGAC+TGG | 0.571285 | 2.1:+75848232 | MS.gene00612:CDS |
CAACAATAAAGGATATCCGC+TGG | 0.574591 | 2.1:-75848642 | None:intergenic |
ACTACTACTACTCATCATCA+TGG | 0.575631 | 2.1:+75843923 | MS.gene00612:CDS |
GATGGAACGAGATGGATGGA+AGG | 0.576040 | 2.1:-75849199 | None:intergenic |
ACCCTGGTTATTTACAGCTG+GGG | 0.577398 | 2.1:+75850804 | MS.gene00612:CDS |
TTATGTTGAGTGGTTCAAAT+GGG | 0.579837 | 2.1:+75846729 | MS.gene00612:CDS |
CATATTGGATATGACATCAA+GGG | 0.580562 | 2.1:+75844815 | MS.gene00612:CDS |
GATGTACTTCTGTTCAACAC+TGG | 0.585057 | 2.1:+75848154 | MS.gene00612:CDS |
GAAGGTTCATTCCTTCAAAG+TGG | 0.585876 | 2.1:+75846794 | MS.gene00612:CDS |
AAGGTTCATTCCTTCAAAGT+GGG | 0.586722 | 2.1:+75846795 | MS.gene00612:CDS |
TCTGTCTGATATTCATATTG+TGG | 0.589903 | 2.1:+75847990 | MS.gene00612:CDS |
TCATCGGAATCATGATCAGA+TGG | 0.590859 | 2.1:-75843664 | None:intergenic |
TGGACTGCAAGTTTCACCCC+AGG | 0.591777 | 2.1:+75850779 | MS.gene00612:CDS |
TGAGTACAATGATGAGGAAG+TGG | 0.592725 | 2.1:+75846509 | MS.gene00612:CDS |
TTGGAGAGGTCCCTTTGAAG+TGG | 0.595478 | 2.1:+75844777 | MS.gene00612:CDS |
TGATGGAACTGTCCGTGTCT+GGG | 0.597835 | 2.1:+75847897 | MS.gene00612:CDS |
GATCTTCATCAGGAAGGAGG+AGG | 0.602770 | 2.1:+75844606 | MS.gene00612:CDS |
GACGTTGATGACTCGGAAGG+TGG | 0.608124 | 2.1:+75844570 | MS.gene00612:CDS |
CATGCAAATTCAAATGGGAG+AGG | 0.611790 | 2.1:+75850545 | MS.gene00612:CDS |
AGCCGAGATGAAGAAGAAAG+AGG | 0.612426 | 2.1:+75843627 | MS.gene00612:CDS |
CTTCAAAGGGACCTCTCCAA+TGG | 0.612908 | 2.1:-75844774 | None:intergenic |
TAATAACAATACCTCCAGGA+TGG | 0.614469 | 2.1:-75849326 | None:intergenic |
ATAAAGAAGATGGAACGAGA+TGG | 0.615602 | 2.1:-75849207 | None:intergenic |
TCTGTGGAATGGCACCGGAA+AGG | 0.618310 | 2.1:+75848597 | MS.gene00612:CDS |
TCATAGCATTGTCATACGCA+GGG | 0.620700 | 2.1:-75847418 | None:intergenic |
AAACCAGACTTACGCAGAGA+CGG | 0.621759 | 2.1:-75848013 | None:intergenic |
TGGCAGATGTCTGAGACAGT+GGG | 0.626311 | 2.1:+75847930 | MS.gene00612:CDS |
CAGTTTCAACCTCCCAGACA+CGG | 0.626919 | 2.1:-75847909 | None:intergenic |
AGCTCCGATCTTCATCAGGA+AGG | 0.628030 | 2.1:+75844600 | MS.gene00612:CDS |
GAATCATGATCAGATGGAGG+CGG | 0.628111 | 2.1:-75843658 | None:intergenic |
TATGTTAGAGGAATTCGCAA+TGG | 0.631262 | 2.1:+75846972 | MS.gene00612:CDS |
CAGGTGATAATTTAATTGTG+GGG | 0.633645 | 2.1:+75849440 | MS.gene00612:intron |
GTTGGAATATACTCTAAAGG+AGG | 0.636366 | 2.1:-75847233 | None:intergenic |
TCCGATCTTCATCAGGAAGG+AGG | 0.636888 | 2.1:+75844603 | MS.gene00612:CDS |
ATATTGGATATGACATCAAG+GGG | 0.637046 | 2.1:+75844816 | MS.gene00612:CDS |
TCCTCGAAATACCATTGGAG+AGG | 0.637496 | 2.1:+75844763 | MS.gene00612:CDS |
CAATTCTGACTCCCAAGACG+AGG | 0.643332 | 2.1:+75843955 | MS.gene00612:CDS |
AGAAAGCACCTAGTGTACGC+TGG | 0.647760 | 2.1:+75848430 | MS.gene00612:CDS |
ATTCGATATAGCATGTTATG+GGG | 0.653568 | 2.1:-75847719 | None:intergenic |
TTGGGAGTCAGAATTGTCGT+CGG | 0.654239 | 2.1:-75843948 | None:intergenic |
TTCTGACTCCCAAGACGAGG+AGG | 0.656012 | 2.1:+75843958 | MS.gene00612:CDS |
TTGATGTCATATCCAATATG+GGG | 0.658360 | 2.1:-75844812 | None:intergenic |
CTTTGATGAGTACAATGATG+AGG | 0.661806 | 2.1:+75846503 | MS.gene00612:CDS |
GTGATGAAGAAGAACAGCAA+AGG | 0.662428 | 2.1:+75848182 | MS.gene00612:CDS |
ATGTGCAGGATTATGTTGAG+TGG | 0.665536 | 2.1:+75846719 | MS.gene00612:intron |
CTTAAAGATGATAAACACGA+TGG | 0.672298 | 2.1:+75848453 | MS.gene00612:CDS |
AGGATGGACTGCAATTGACG+AGG | 0.675101 | 2.1:-75849310 | None:intergenic |
AGAATGTTACTTCTGTGGAA+TGG | 0.676838 | 2.1:+75848586 | MS.gene00612:intron |
TGCTGAGAGTGATTCATCTG+AGG | 0.679468 | 2.1:+75844629 | MS.gene00612:CDS |
TCGGAATCATGATCAGATGG+AGG | 0.680487 | 2.1:-75843661 | None:intergenic |
GCCCCAGCTGTAAATAACCA+GGG | 0.684465 | 2.1:-75850805 | None:intergenic |
ACAATATGAATATCAGACAG+AGG | 0.684612 | 2.1:-75847988 | None:intergenic |
TAGGACGTTGATGACTCGGA+AGG | 0.686071 | 2.1:+75844567 | MS.gene00612:intron |
TGGCCCCGTAGAATTTCCAA+AGG | 0.689804 | 2.1:-75850524 | None:intergenic |
TAAATAACCAGGGTTGCCTG+GGG | 0.690591 | 2.1:-75850795 | None:intergenic |
GCCCTAAATTTATCCCACAA+AGG | 0.699342 | 2.1:+75847300 | MS.gene00612:CDS |
ACGCACCCGAACCCAAACGA+AGG | 0.702076 | 2.1:+75846776 | MS.gene00612:CDS |
TTTGTGGGATAAATTTAGGG+CGG | 0.703720 | 2.1:-75847298 | None:intergenic |
TCTGAGCACGAAGCAAACAA+GGG | 0.712455 | 2.1:-75850434 | None:intergenic |
TGTGGATCAAAGTCAGAATG+TGG | 0.716263 | 2.1:-75846585 | None:intergenic |
TGGAACTGTCCGTGTCTGGG+AGG | 0.720097 | 2.1:+75847900 | MS.gene00612:CDS |
TCAATTGCAGTCCATCCTGG+AGG | 0.730857 | 2.1:+75849315 | MS.gene00612:CDS |
GTTCCTTTGGAAATTCTACG+GGG | 0.734441 | 2.1:+75850521 | MS.gene00612:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 75843604 | 75850861 | 75843604 | ID=MS.gene00612 |
chr2.1 | mRNA | 75843604 | 75850861 | 75843604 | ID=MS.gene00612.t1;Parent=MS.gene00612 |
chr2.1 | exon | 75843604 | 75843711 | 75843604 | ID=MS.gene00612.t1.exon1;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75843604 | 75843711 | 75843604 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75843830 | 75843979 | 75843830 | ID=MS.gene00612.t1.exon2;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75843830 | 75843979 | 75843830 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75844570 | 75844656 | 75844570 | ID=MS.gene00612.t1.exon3;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75844570 | 75844656 | 75844570 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75844758 | 75844912 | 75844758 | ID=MS.gene00612.t1.exon4;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75844758 | 75844912 | 75844758 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75846494 | 75846611 | 75846494 | ID=MS.gene00612.t1.exon5;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75846494 | 75846611 | 75846494 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75846727 | 75846828 | 75846727 | ID=MS.gene00612.t1.exon6;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75846727 | 75846828 | 75846727 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75846963 | 75847119 | 75846963 | ID=MS.gene00612.t1.exon7;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75846963 | 75847119 | 75846963 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75847213 | 75847321 | 75847213 | ID=MS.gene00612.t1.exon8;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75847213 | 75847321 | 75847213 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75847397 | 75847499 | 75847397 | ID=MS.gene00612.t1.exon9;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75847397 | 75847499 | 75847397 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75847657 | 75847807 | 75847657 | ID=MS.gene00612.t1.exon10;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75847657 | 75847807 | 75847657 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75847890 | 75848022 | 75847890 | ID=MS.gene00612.t1.exon11;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75847890 | 75848022 | 75847890 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75848147 | 75848253 | 75848147 | ID=MS.gene00612.t1.exon12;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75848147 | 75848253 | 75848147 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75848427 | 75848497 | 75848427 | ID=MS.gene00612.t1.exon13;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75848427 | 75848497 | 75848427 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75848588 | 75848660 | 75848588 | ID=MS.gene00612.t1.exon14;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75848588 | 75848660 | 75848588 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75849124 | 75849336 | 75849124 | ID=MS.gene00612.t1.exon15;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75849124 | 75849336 | 75849124 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75849443 | 75849527 | 75849443 | ID=MS.gene00612.t1.exon16;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75849443 | 75849527 | 75849443 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75850388 | 75850566 | 75850388 | ID=MS.gene00612.t1.exon17;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75850388 | 75850566 | 75850388 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
chr2.1 | exon | 75850773 | 75850861 | 75850773 | ID=MS.gene00612.t1.exon18;Parent=MS.gene00612.t1 |
chr2.1 | CDS | 75850773 | 75850861 | 75850773 | ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1 |
Gene Sequence |
Protein sequence |