AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00612


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00612.t1 MTR_2g006020 88.777 793 20 8 1 729 1 788 0.0 1394
MS.gene00612.t1 MTR_2g006020 92.870 561 15 6 1 541 1 556 0.0 1033
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00612.t1 AT2G40360 66.516 663 208 6 73 728 98 753 0.0 920
MS.gene00612.t1 AT2G40360 64.235 699 235 7 38 728 45 736 0.0 920

Find 181 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCTTTGTGGGATAAATTT+AGG 0.098465 2.1:-75847302 None:intergenic
GAAAGAAAGGGAAGACAAAT+TGG 0.200648 2.1:+75844853 MS.gene00612:CDS
CCTTGATGTCATATCCAATA+TGG 0.214290 2.1:-75844814 None:intergenic
ACAACGTTGTTAATATCTTT+TGG 0.224398 2.1:-75850395 None:intergenic
AGCTTTGGCTTTAAAGATTC+AGG 0.238489 2.1:-75847669 None:intergenic
TATAAGGTTAAGGCATTTAA+AGG 0.244291 2.1:+75848476 MS.gene00612:CDS
TCAATTTCTATTGAAGCTTC+AGG 0.254166 2.1:+75847768 MS.gene00612:CDS
AAAGCTTTGTTGGTTTGATA+TGG 0.264615 2.1:+75849474 MS.gene00612:CDS
TAAGAATCATCCTCCTTCTT+TGG 0.272852 2.1:-75847014 None:intergenic
ACTTACTTAAGAACTTTATA+TGG 0.279811 2.1:-75849511 None:intergenic
GCCAAAGCTTCCAAATAAAA+AGG 0.283788 2.1:+75847683 MS.gene00612:CDS
ACCTTTGTGGGATAAATTTA+GGG 0.287084 2.1:-75847301 None:intergenic
AAATCCTCTTATTGTTCCTT+TGG 0.289726 2.1:+75850508 MS.gene00612:CDS
TTCAAAGTGGGAAGCTAAAA+AGG 0.292304 2.1:+75846807 MS.gene00612:CDS
CTCTTGTGGGAAGATGATTC+TGG 0.293595 2.1:+75847038 MS.gene00612:CDS
GATATGAATTAATCTCTTCT+TGG 0.293648 2.1:-75847256 None:intergenic
TTGAAAAGTAGTCACCTTTC+CGG 0.298992 2.1:-75848611 None:intergenic
ATGAACCTTCGTTTGGGTTC+GGG 0.309674 2.1:-75846781 None:intergenic
TATTTGCATTGCAGGAATAT+TGG 0.313865 2.1:+75850759 MS.gene00612:intron
CCAGTCTCATCTGATGCTTC+TGG 0.319072 2.1:-75848232 None:intergenic
ATGATAAACACGATGGTATA+AGG 0.329604 2.1:+75848460 MS.gene00612:CDS
TATTCGATATAGCATGTTAT+GGG 0.338942 2.1:-75847720 None:intergenic
CTTCTGTTCAACACTGGTTT+GGG 0.343502 2.1:+75848160 MS.gene00612:CDS
AGAAGAACAGCAAAGGATTA+AGG 0.351258 2.1:+75848189 MS.gene00612:CDS
TGAAGGAATGAACCTTCGTT+TGG 0.352971 2.1:-75846788 None:intergenic
ATATTCGATATAGCATGTTA+TGG 0.356240 2.1:-75847721 None:intergenic
AAAAGATAAAGAAGAAAGAA+AGG 0.359734 2.1:+75844840 MS.gene00612:CDS
TCAGGGCAGTGGATGGCTTC+AGG 0.362455 2.1:+75847786 MS.gene00612:CDS
TGTAAATAACCAGGGTTGCC+TGG 0.363124 2.1:-75850797 None:intergenic
ACTTCTGTTCAACACTGGTT+TGG 0.364653 2.1:+75848159 MS.gene00612:CDS
AATGAACCTTCGTTTGGGTT+CGG 0.364933 2.1:-75846782 None:intergenic
ACATGCTATATCGAATATAA+AGG 0.374460 2.1:+75847726 MS.gene00612:CDS
GCACCAAAGCAGAAACTTCC+TGG 0.381658 2.1:+75847098 MS.gene00612:CDS
AGCTAATAAATCAACAATAA+AGG 0.381708 2.1:-75848653 None:intergenic
TTGATGTAACTGCACCTTCA+TGG 0.388375 2.1:-75847749 None:intergenic
CGGGGCCATGCAAATTCAAA+TGG 0.388895 2.1:+75850539 MS.gene00612:CDS
GAATTAATCTCTTCTTGGGT+TGG 0.389942 2.1:-75847251 None:intergenic
GCGCAAACTAATGCAGAATA+AGG 0.393235 2.1:+75846560 MS.gene00612:CDS
ATATGAATTAATCTCTTCTT+GGG 0.401613 2.1:-75847255 None:intergenic
ATCATCAACATTTGCAAGAA+AGG 0.402378 2.1:-75844879 None:intergenic
TTGTTCCTTTGGAAATTCTA+CGG 0.403370 2.1:+75850519 MS.gene00612:CDS
CAACCCTGGTTATTTACAGC+TGG 0.404320 2.1:+75850802 MS.gene00612:CDS
GTGATGGAACTGTCCGTGTC+TGG 0.404605 2.1:+75847896 MS.gene00612:CDS
CTCTCCCATTTGAATTTGCA+TGG 0.409359 2.1:-75850544 None:intergenic
GACAAAAGATGAAATCAAAA+TGG 0.410244 2.1:+75846536 MS.gene00612:CDS
ATTTCCAAAGGAACAATAAG+AGG 0.410944 2.1:-75850512 None:intergenic
CTTGATGTCATATCCAATAT+GGG 0.413782 2.1:-75844813 None:intergenic
ATACCAGGAAGTTTCTGCTT+TGG 0.424563 2.1:-75847101 None:intergenic
ATGTTGATGATTCTAAGAAT+TGG 0.428284 2.1:+75844891 MS.gene00612:CDS
GAAGGAATGAACCTTCGTTT+GGG 0.436375 2.1:-75846787 None:intergenic
GTGAGAGTTTCTTGGACAAC+TGG 0.437387 2.1:-75849134 None:intergenic
TTCCTCTTTCTTCTTCATCT+CGG 0.439715 2.1:-75843629 None:intergenic
ATATAGCATGTTATGGGGTA+AGG 0.441338 2.1:-75847714 None:intergenic
GAAGCTGACCTCCTCGTCTT+GGG 0.442155 2.1:-75843966 None:intergenic
TTAATTGTGGGGAGCAAAGA+AGG 0.442713 2.1:+75849451 MS.gene00612:CDS
GCAAAGAAGGAAAGCTTTGT+TGG 0.443901 2.1:+75849464 MS.gene00612:CDS
TGTTCCTTTGGAAATTCTAC+GGG 0.444924 2.1:+75850520 MS.gene00612:CDS
TATGAGGATGAACCCCATAT+TGG 0.445423 2.1:+75844800 MS.gene00612:CDS
GTAAATAACCAGGGTTGCCT+GGG 0.445737 2.1:-75850796 None:intergenic
CGTGTCTGGGAGGTTGAAAC+TGG 0.447803 2.1:+75847910 MS.gene00612:CDS
CTGGCAGATGTCTGAGACAG+TGG 0.448817 2.1:+75847929 MS.gene00612:CDS
AACACGATGGTATAAGGTTA+AGG 0.454384 2.1:+75848466 MS.gene00612:CDS
CTTTGTACAAATAAAGAAGA+TGG 0.456986 2.1:-75849217 None:intergenic
ATTATGTTGAGTGGTTCAAA+TGG 0.460094 2.1:+75846728 MS.gene00612:CDS
TTCTGACTTTGATCCACATC+CGG 0.460539 2.1:+75846590 MS.gene00612:CDS
AAACTTCCTTTCAAGTTACA+TGG 0.460764 2.1:+75849159 MS.gene00612:CDS
AAAGATAAAGAAGAAAGAAA+GGG 0.466560 2.1:+75844841 MS.gene00612:CDS
GGATGATTCTTATCTCTTGT+GGG 0.469629 2.1:+75847025 MS.gene00612:CDS
TGAAAGCTCCGATCTTCATC+AGG 0.471911 2.1:+75844596 MS.gene00612:CDS
GGAAGTTTCTGCTTTGGTGC+AGG 0.474613 2.1:-75847095 None:intergenic
GCAGGTGATAATTTAATTGT+GGG 0.476821 2.1:+75849439 MS.gene00612:intron
TGGGTTGGAATATACTCTAA+AGG 0.478484 2.1:-75847236 None:intergenic
TGAAGCTGACCTCCTCGTCT+TGG 0.479040 2.1:-75843967 None:intergenic
CAATTTCTATTGAAGCTTCA+GGG 0.480377 2.1:+75847769 MS.gene00612:CDS
AGGATGATTCTTATCTCTTG+TGG 0.482043 2.1:+75847024 MS.gene00612:CDS
TCGTCAATTGCAGTCCATCC+TGG 0.485324 2.1:+75849312 MS.gene00612:CDS
TGCAGGTGATAATTTAATTG+TGG 0.485837 2.1:+75849438 MS.gene00612:intron
CTATTGAAGCTTCAGGGCAG+TGG 0.486682 2.1:+75847775 MS.gene00612:CDS
AAGTAAATACAGACCGGATG+TGG 0.489461 2.1:-75846603 None:intergenic
TTCTTGATCATTTAGGCGGA+AGG 0.494928 2.1:+75846479 MS.gene00612:intron
AACCCTGGTTATTTACAGCT+GGG 0.495621 2.1:+75850803 MS.gene00612:CDS
AAGCTGTGAACTGTGTTACT+TGG 0.496069 2.1:+75847962 MS.gene00612:CDS
CAGGTTGTGCAGTATGTTAG+AGG 0.496768 2.1:+75846960 MS.gene00612:intron
GTCATCGGAGTCGTCGTCAT+CGG 0.502887 2.1:-75843680 None:intergenic
AAAGAAAGGGAAGACAAATT+GGG 0.504818 2.1:+75844854 MS.gene00612:CDS
ATGAAAGCACAGTACCTTTG+TGG 0.506407 2.1:-75847314 None:intergenic
TGCGTTAGACAATGGATGCT+TGG 0.517477 2.1:-75846758 None:intergenic
ATCTGAGCACGAAGCAAACA+AGG 0.519889 2.1:-75850435 None:intergenic
TCATCCTCATACCACTTCAA+AGG 0.523812 2.1:-75844788 None:intergenic
TTCATAGCATTGTCATACGC+AGG 0.524375 2.1:-75847419 None:intergenic
TGCGTATGACAATGCTATGA+AGG 0.524552 2.1:+75847421 MS.gene00612:CDS
AGCCCCAGCTGTAAATAACC+AGG 0.525330 2.1:-75850806 None:intergenic
CCATATTGGATATGACATCA+AGG 0.525475 2.1:+75844814 MS.gene00612:CDS
CATCCTCATACCACTTCAAA+GGG 0.526557 2.1:-75844787 None:intergenic
ACCTCTCCAATGGTATTTCG+AGG 0.527431 2.1:-75844764 None:intergenic
ATTGTAGGACGTTGATGACT+CGG 0.530821 2.1:+75844563 MS.gene00612:intron
CTTTATATGGTTTAGACGAA+AGG 0.531394 2.1:-75849498 None:intergenic
GGTCCCTTTGAAGTGGTATG+AGG 0.533326 2.1:+75844784 MS.gene00612:CDS
TGACGAGGCTTCTTTGAGAC+CGG 0.534532 2.1:-75849295 None:intergenic
TGAAAGCACAGTACCTTTGT+GGG 0.534624 2.1:-75847313 None:intergenic
GGTTCGGGTGCGTTAGACAA+TGG 0.536640 2.1:-75846766 None:intergenic
GAGGATTATATGACTCATCA+TGG 0.537199 2.1:-75847214 None:intergenic
TGTCTGAGACAGTGGGAGAT+TGG 0.541054 2.1:+75847937 MS.gene00612:CDS
ATCGAATATAAAGGCCATGA+AGG 0.541999 2.1:+75847735 MS.gene00612:CDS
TCTTTAAGCCAGCGTACACT+AGG 0.542961 2.1:-75848438 None:intergenic
TCCTCCTTCCTGATGAAGAT+CGG 0.543589 2.1:-75844604 None:intergenic
CATGCAGAATGTTACTTCTG+TGG 0.543641 2.1:+75848581 MS.gene00612:intron
GAGTGATTCATCTGAGGATG+AGG 0.544074 2.1:+75844635 MS.gene00612:CDS
AGAAGATGGAACGAGATGGA+TGG 0.545362 2.1:-75849203 None:intergenic
AGTTTCACCCCAGGCAACCC+TGG 0.550056 2.1:+75850788 MS.gene00612:CDS
GGAAACTTCAACACTGTCAT+CGG 0.555060 2.1:-75843695 None:intergenic
TCTGAATTAGAACATGAAGA+AGG 0.558879 2.1:+75843884 MS.gene00612:CDS
GCAAGTCCATGTAACTTGAA+AGG 0.563238 2.1:-75849165 None:intergenic
GTGGCTCCTCGAAATACCAT+TGG 0.564896 2.1:+75844758 MS.gene00612:CDS
GGGGCCATGCAAATTCAAAT+GGG 0.565061 2.1:+75850540 MS.gene00612:CDS
TCATGATCAGATGGAGGCGG+CGG 0.566388 2.1:-75843655 None:intergenic
TTACTTCTGTGGAATGGCAC+CGG 0.567545 2.1:+75848592 MS.gene00612:CDS
TGAAGCTTCAGGGCAGTGGA+TGG 0.570556 2.1:+75847779 MS.gene00612:CDS
CCAGAAGCATCAGATGAGAC+TGG 0.571285 2.1:+75848232 MS.gene00612:CDS
CAACAATAAAGGATATCCGC+TGG 0.574591 2.1:-75848642 None:intergenic
ACTACTACTACTCATCATCA+TGG 0.575631 2.1:+75843923 MS.gene00612:CDS
GATGGAACGAGATGGATGGA+AGG 0.576040 2.1:-75849199 None:intergenic
ACCCTGGTTATTTACAGCTG+GGG 0.577398 2.1:+75850804 MS.gene00612:CDS
TTATGTTGAGTGGTTCAAAT+GGG 0.579837 2.1:+75846729 MS.gene00612:CDS
CATATTGGATATGACATCAA+GGG 0.580562 2.1:+75844815 MS.gene00612:CDS
GATGTACTTCTGTTCAACAC+TGG 0.585057 2.1:+75848154 MS.gene00612:CDS
GAAGGTTCATTCCTTCAAAG+TGG 0.585876 2.1:+75846794 MS.gene00612:CDS
AAGGTTCATTCCTTCAAAGT+GGG 0.586722 2.1:+75846795 MS.gene00612:CDS
TCTGTCTGATATTCATATTG+TGG 0.589903 2.1:+75847990 MS.gene00612:CDS
TCATCGGAATCATGATCAGA+TGG 0.590859 2.1:-75843664 None:intergenic
TGGACTGCAAGTTTCACCCC+AGG 0.591777 2.1:+75850779 MS.gene00612:CDS
TGAGTACAATGATGAGGAAG+TGG 0.592725 2.1:+75846509 MS.gene00612:CDS
TTGGAGAGGTCCCTTTGAAG+TGG 0.595478 2.1:+75844777 MS.gene00612:CDS
TGATGGAACTGTCCGTGTCT+GGG 0.597835 2.1:+75847897 MS.gene00612:CDS
GATCTTCATCAGGAAGGAGG+AGG 0.602770 2.1:+75844606 MS.gene00612:CDS
GACGTTGATGACTCGGAAGG+TGG 0.608124 2.1:+75844570 MS.gene00612:CDS
CATGCAAATTCAAATGGGAG+AGG 0.611790 2.1:+75850545 MS.gene00612:CDS
AGCCGAGATGAAGAAGAAAG+AGG 0.612426 2.1:+75843627 MS.gene00612:CDS
CTTCAAAGGGACCTCTCCAA+TGG 0.612908 2.1:-75844774 None:intergenic
TAATAACAATACCTCCAGGA+TGG 0.614469 2.1:-75849326 None:intergenic
ATAAAGAAGATGGAACGAGA+TGG 0.615602 2.1:-75849207 None:intergenic
TCTGTGGAATGGCACCGGAA+AGG 0.618310 2.1:+75848597 MS.gene00612:CDS
TCATAGCATTGTCATACGCA+GGG 0.620700 2.1:-75847418 None:intergenic
AAACCAGACTTACGCAGAGA+CGG 0.621759 2.1:-75848013 None:intergenic
TGGCAGATGTCTGAGACAGT+GGG 0.626311 2.1:+75847930 MS.gene00612:CDS
CAGTTTCAACCTCCCAGACA+CGG 0.626919 2.1:-75847909 None:intergenic
AGCTCCGATCTTCATCAGGA+AGG 0.628030 2.1:+75844600 MS.gene00612:CDS
GAATCATGATCAGATGGAGG+CGG 0.628111 2.1:-75843658 None:intergenic
TATGTTAGAGGAATTCGCAA+TGG 0.631262 2.1:+75846972 MS.gene00612:CDS
CAGGTGATAATTTAATTGTG+GGG 0.633645 2.1:+75849440 MS.gene00612:intron
GTTGGAATATACTCTAAAGG+AGG 0.636366 2.1:-75847233 None:intergenic
TCCGATCTTCATCAGGAAGG+AGG 0.636888 2.1:+75844603 MS.gene00612:CDS
ATATTGGATATGACATCAAG+GGG 0.637046 2.1:+75844816 MS.gene00612:CDS
TCCTCGAAATACCATTGGAG+AGG 0.637496 2.1:+75844763 MS.gene00612:CDS
CAATTCTGACTCCCAAGACG+AGG 0.643332 2.1:+75843955 MS.gene00612:CDS
AGAAAGCACCTAGTGTACGC+TGG 0.647760 2.1:+75848430 MS.gene00612:CDS
ATTCGATATAGCATGTTATG+GGG 0.653568 2.1:-75847719 None:intergenic
TTGGGAGTCAGAATTGTCGT+CGG 0.654239 2.1:-75843948 None:intergenic
TTCTGACTCCCAAGACGAGG+AGG 0.656012 2.1:+75843958 MS.gene00612:CDS
TTGATGTCATATCCAATATG+GGG 0.658360 2.1:-75844812 None:intergenic
CTTTGATGAGTACAATGATG+AGG 0.661806 2.1:+75846503 MS.gene00612:CDS
GTGATGAAGAAGAACAGCAA+AGG 0.662428 2.1:+75848182 MS.gene00612:CDS
ATGTGCAGGATTATGTTGAG+TGG 0.665536 2.1:+75846719 MS.gene00612:intron
CTTAAAGATGATAAACACGA+TGG 0.672298 2.1:+75848453 MS.gene00612:CDS
AGGATGGACTGCAATTGACG+AGG 0.675101 2.1:-75849310 None:intergenic
AGAATGTTACTTCTGTGGAA+TGG 0.676838 2.1:+75848586 MS.gene00612:intron
TGCTGAGAGTGATTCATCTG+AGG 0.679468 2.1:+75844629 MS.gene00612:CDS
TCGGAATCATGATCAGATGG+AGG 0.680487 2.1:-75843661 None:intergenic
GCCCCAGCTGTAAATAACCA+GGG 0.684465 2.1:-75850805 None:intergenic
ACAATATGAATATCAGACAG+AGG 0.684612 2.1:-75847988 None:intergenic
TAGGACGTTGATGACTCGGA+AGG 0.686071 2.1:+75844567 MS.gene00612:intron
TGGCCCCGTAGAATTTCCAA+AGG 0.689804 2.1:-75850524 None:intergenic
TAAATAACCAGGGTTGCCTG+GGG 0.690591 2.1:-75850795 None:intergenic
GCCCTAAATTTATCCCACAA+AGG 0.699342 2.1:+75847300 MS.gene00612:CDS
ACGCACCCGAACCCAAACGA+AGG 0.702076 2.1:+75846776 MS.gene00612:CDS
TTTGTGGGATAAATTTAGGG+CGG 0.703720 2.1:-75847298 None:intergenic
TCTGAGCACGAAGCAAACAA+GGG 0.712455 2.1:-75850434 None:intergenic
TGTGGATCAAAGTCAGAATG+TGG 0.716263 2.1:-75846585 None:intergenic
TGGAACTGTCCGTGTCTGGG+AGG 0.720097 2.1:+75847900 MS.gene00612:CDS
TCAATTGCAGTCCATCCTGG+AGG 0.730857 2.1:+75849315 MS.gene00612:CDS
GTTCCTTTGGAAATTCTACG+GGG 0.734441 2.1:+75850521 MS.gene00612:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.1 gene 75843604 75850861 75843604 ID=MS.gene00612
chr2.1 mRNA 75843604 75850861 75843604 ID=MS.gene00612.t1;Parent=MS.gene00612
chr2.1 exon 75843604 75843711 75843604 ID=MS.gene00612.t1.exon1;Parent=MS.gene00612.t1
chr2.1 CDS 75843604 75843711 75843604 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75843830 75843979 75843830 ID=MS.gene00612.t1.exon2;Parent=MS.gene00612.t1
chr2.1 CDS 75843830 75843979 75843830 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75844570 75844656 75844570 ID=MS.gene00612.t1.exon3;Parent=MS.gene00612.t1
chr2.1 CDS 75844570 75844656 75844570 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75844758 75844912 75844758 ID=MS.gene00612.t1.exon4;Parent=MS.gene00612.t1
chr2.1 CDS 75844758 75844912 75844758 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75846494 75846611 75846494 ID=MS.gene00612.t1.exon5;Parent=MS.gene00612.t1
chr2.1 CDS 75846494 75846611 75846494 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75846727 75846828 75846727 ID=MS.gene00612.t1.exon6;Parent=MS.gene00612.t1
chr2.1 CDS 75846727 75846828 75846727 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75846963 75847119 75846963 ID=MS.gene00612.t1.exon7;Parent=MS.gene00612.t1
chr2.1 CDS 75846963 75847119 75846963 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75847213 75847321 75847213 ID=MS.gene00612.t1.exon8;Parent=MS.gene00612.t1
chr2.1 CDS 75847213 75847321 75847213 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75847397 75847499 75847397 ID=MS.gene00612.t1.exon9;Parent=MS.gene00612.t1
chr2.1 CDS 75847397 75847499 75847397 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75847657 75847807 75847657 ID=MS.gene00612.t1.exon10;Parent=MS.gene00612.t1
chr2.1 CDS 75847657 75847807 75847657 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75847890 75848022 75847890 ID=MS.gene00612.t1.exon11;Parent=MS.gene00612.t1
chr2.1 CDS 75847890 75848022 75847890 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75848147 75848253 75848147 ID=MS.gene00612.t1.exon12;Parent=MS.gene00612.t1
chr2.1 CDS 75848147 75848253 75848147 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75848427 75848497 75848427 ID=MS.gene00612.t1.exon13;Parent=MS.gene00612.t1
chr2.1 CDS 75848427 75848497 75848427 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75848588 75848660 75848588 ID=MS.gene00612.t1.exon14;Parent=MS.gene00612.t1
chr2.1 CDS 75848588 75848660 75848588 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75849124 75849336 75849124 ID=MS.gene00612.t1.exon15;Parent=MS.gene00612.t1
chr2.1 CDS 75849124 75849336 75849124 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75849443 75849527 75849443 ID=MS.gene00612.t1.exon16;Parent=MS.gene00612.t1
chr2.1 CDS 75849443 75849527 75849443 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75850388 75850566 75850388 ID=MS.gene00612.t1.exon17;Parent=MS.gene00612.t1
chr2.1 CDS 75850388 75850566 75850388 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
chr2.1 exon 75850773 75850861 75850773 ID=MS.gene00612.t1.exon18;Parent=MS.gene00612.t1
chr2.1 CDS 75850773 75850861 75850773 ID=cds.MS.gene00612.t1;Parent=MS.gene00612.t1
Gene Sequence

>MS.gene00612

ATGAAGAAAAAGACGGTTGTTGAAGCCGAGATGAAGAAGAAAGAGGAAGCACCGCCGCCTCCATCTGATCATGATTCCGATGACGACGACTCCGATGACAGTGTTGAAGTTTCCGACTACGATTCCATTTCCGAAGATGAAGAGGTATCATCCCTTCTTCACTCACTTTCTTCATTCATTCTTCTTTACTCATGCTTAATTCATTCTTCTGTTCTGTTTGTTGCAGGACTCTTCTGCAGACGACTCTTCATCTGATTCTGACTCTGATTCTGATTCTAAATCTGAATTAGAACATGAAGAAGGCGCTTCACCTACTACTACTACTACTACTCATCATCATGGCTCCGACGACAATTCTGACTCCCAAGACGAGGAGGTCAGCTTCATTACTTTCTTTTCCCAATTTCGATTCAACAACTTCGACATGTTTATAAGCTCTTTTCACCCTATTTACGGCCTGTTTGGACAAACACCTTATTTGCAGCTTATAGCTCAAGCTCGCTTATGCATAAGCTTACATATGTTATTTTTATAGAAAAAGATAAATTTATTTATATTGTTTTTATGTATGCTAAAAGCTGTTTTTATGAGCTATATTGGAGAACTTATCAAACTAAGTCAAATAATGCTTGTGAAAATTGTCATCAACTGTTTTCATAAGCTCTTCCAAGCCGTCTCACAAAACTTATGTCAGTGGATAAGCCAATTTAAACAGGCCCATGAGTAGTTAAGTTTTATAAGATAGCTTATGAAAATAGCTTATAGCTTATACCCAAACTATTTAACTTTGTTTAATATTTTGCTATCAAAACAACTTATACATAAATGCTCATAAGTGCTTGTGCTTTAAGTTGAAATTAAGTTGTTTATCCAAACAGTCCTCTGCTATTATGATATCTATAACTAGGAGGACCGTGTTGTTGTTCTTTTTCTATTAATTAATGTGTTCAAAATCAATTATTGTAGGACGTTGATGACTCGGAAGGTGGAAGTGAAAGCTCCGATCTTCATCAGGAAGGAGGAGGTGCTGAGAGTGATTCATCTGAGGATGAGGTATTCCTCTTCGTCATCATTATAATTATTTGTTGTAATCAATTCCCATTTATATTACTATGGACCTGAATTTGATTACTCTGGCTCTCCTTTTTCCATAGGTGGCTCCTCGAAATACCATTGGAGAGGTCCCTTTGAAGTGGTATGAGGATGAACCCCATATTGGATATGACATCAAGGGGAAAAAGATAAAGAAGAAAGAAAGGGAAGACAAATTGGGTTCCTTTCTTGCAAATGTTGATGATTCTAAGAATTGGTTAGTGTCATATATCTATATCAACTTGTTGTCTCTATTTCCATTTTCATTATTGCATTCTTTTTGTACTCACTGACACATATAGGCTAGGTACATACAAATGTGTCTTCTATAACTTTTGAAGTCTAAAGTTTGATTAAGAATGCTTTGTATCTCTTTCTCTCTAAGTGCGTAGATTGTTAATAGGATGCATATATCTGTAATACATTGGTCTTTTTACACTGTATATAGGTTTTGAGAGCATTTGTTGGTGTCAAGTTTTTTTTGGTCGCTAAGAGGATTTACTTACAACCTTTGATGGATGATACTGTATCTGTGTTTCTTGTACTTGGGATGTTTTTTTAATTGTTTTACTTATAGTACGTACCACATTTAGAGTTAAGTCCTGTGCTTTGTTCTGCCCGTTTACATCATTTGATGATAATGATCTTGAACTCTGTCCCCAGTCCCCACATATTAACATGGATGTGCAGTTTTAAACTGAATGATGATGTAGAAATCTGGCCTCATATATCTCACTAATTCTCGATACTTTCATTTACACTTATCTCTATTGAACTCTAAATTACCAGTGTCCTTCTCTCTTAAAAATGAAGACTTAAGACTAAAAGAAACTTCTAATCATATATAAAAGGAAGAAGTACTTGTAGGTCAGTTAGGAAAGTCAAATAGACAATAGTGAAAAACACAATTGTATGTACCTAGCCTATATATGTCAGTGAGTGAGATATATAAACAGTTACACAATTGTATGCACCTAACCTATATATGTCGGTGAGTGAGATATATAAACAATTTGTAGAGAATCATTTTCAATACAATAAATGTTTACCAAAAAAACAATGATGGATGAAAAGTTGCGGAGCTACACCTAAAATAGCTCAAACACATGAGAGGAGGATCAATATAGGCTCCAGTTAAAGAGTTGATTACATACAGGATAGTCTGATAATTGCAGATAGAAGTAGACCAAGAAAGACCCATGTAAAATAGCTCGAACACATGAGAGGAGGTTCAATATAGGCTCCAGTTAAAGAGTTGATTACATACAGAATAGTCTGATAATTGCAGATAGAGGTAGACCAAGAAAGAAGACCCATGTTAGGCTATTATAAAGAATCTAAAAATCGATAACATCATTGAATAATTTGTCTTAGGAACATAATTGGATCATCCAGTTGACATTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTATAGAGTCCAGTGTACCAACAATATTTTTAGAAATTTCAGGATGTGAAGTTTAAAAACCGAGACCAATTTGTGTTTACTTTTTTTCGTATTTCTTTCAGAGTAAATGTCATATTTTATTTTCACCATCAACCATAGATTCCTGATCTCCAAAATAGTCATGATTTCAGTATTTTAAATTTTTCAGTCGGTTTCAATGTTATAGTTTGGTTTGTTTTCGCTTTCAGTATTTTAAATTTTTCAGTCGGTTTCAATGTTATAGTTTGGTTTGTTTTCGCATGACCCCTATTGTGATATTATTTCACAATGGTTGACTTTTCTTTCTAGAAAACATCATTGATGTGCTTTTATTCTTGATCATTTAGGCGGAAGGTCTTTGATGAGTACAATGATGAGGAAGTGGTGTTGACAAAAGATGAAATCAAAATGGTGCGCAAACTAATGCAGAATAAGGCACCACATTCTGACTTTGATCCACATCCGGTCTGTATTTACTTTCTTTCATTTCTTTCTTTCTTTCTTTGAGTAATAATATAAGTTTTGAAACTCAATTAGCATGGGTAAATCCTTAAATGCATATCTGTTTTGTAATGTGCAGGATTATGTTGAGTGGTTCAAATGGGATGATGCCAAGCATCCATTGTCTAACGCACCCGAACCCAAACGAAGGTTCATTCCTTCAAAGTGGGAAGCTAAAAAGGTAACTATTTCTTCGTTCACATTTTGCACATAATTTGAAATAAGTCGATTAGGTACAGATTATCCAGGTTAGACAAATAAAGCAAATTGATTTCTCTTATCAATCATCTACTTGTATGTTTCTACTTTCTACAGGTTGTGCAGTATGTTAGAGGAATTCGCAATGGAACAATAACTTTTGACAAGCCAAAGAAGGAGGATGATTCTTATCTCTTGTGGGAAGATGATTCTGGTTTGACAGAAAAAGCAAATCATTTGGCTTACATTCCTGCACCAAAGCAGAAACTTCCTGGTATTACACGTGACTTGAATTTTTTAGTTCAGTATAATATTACCTTTTCTTTTTCGGTACCTTTGATGTTAATAATTTCCTTTTACTTCTCAGGCCATGATGAGTCATATAATCCTCCTTTAGAGTATATTCCAACCCAAGAAGAGATTAATTCATATCAATTGATGTATGAAGAAGACCGCCCTAAATTTATCCCACAAAGGTACTGTGCTTTCATGGTGAATATTTTTGCCTCTGTCTCTCTTATGCAATTGAAATAATACATTTCAATTGCCAGGTTTACATCTATGAGAAGCATCCCTGCGTATGACAATGCTATGAAGGAAAGTTTTGAACGCTGTTTGGATTTGTACTTGTGCCCTCGAGTTCGAAGAAAACGTGTGAGTGAATATCCGTATTAAAGAACTGATTTACTGATTTTTTCTCTGCATGTCAAATGTTCTTATTTGTTGCTACTTTTTACTTGCATTTGTATTGTGCATGTGTGTTTCATATCTGGTGTAATTCATTTACATCTTGTTTTTCTCCTATGTCCAGCTTAATATTGATCCTGAATCTTTAAAGCCAAAGCTTCCAAATAAAAAGGAGCTTAAACCTTACCCCATAACATGCTATATCGAATATAAAGGCCATGAAGGTGCAGTTACATCAATTTCTATTGAAGCTTCAGGGCAGTGGATGGCTTCAGGTATATTGATGTTAATAGTGAATATTTTGGTTTCGATTAAACAGTGGAGGTCGGTATCCTCACTTAATTGGATTTTGTGAAGGTTCAAGTGATGGAACTGTCCGTGTCTGGGAGGTTGAAACTGGCAGATGTCTGAGACAGTGGGAGATTGGTGAAGCTGTGAACTGTGTTACTTGGAATCCTCTGTCTGATATTCATATTGTGGCCGTCTCTGCGTAAGTCTGGTTTCCTTGATTATAAACATATATATTTTATTGTATATATAATCTTGAAGTTTTCCTTTTTGTTATACACGTGACTTGATTTTGACCATAAATCAATGTTGAATCTTCCATTTAGGGGACAAGATGTACTTCTGTTCAACACTGGTTTGGGTGATGAAGAAGAACAGCAAAGGATTAAGGAGCTTCTCTTGATTGACTCACCAGAAGCATCAGATGAGACTGGTCAGTTTTGTTCTTACTTCTTTCTTTCGTTTTAATATAAACATCGATCCAGAAGAAGGCTCTAAGAGGTCCCAACTCCCATGTTAACATATAACCCCAACTAAAATTTTAATTATAGAAAAGCAGGCCAGCTAGTTTGTTCTGTTATTTCCTAACCACGCTTGTGTTTGCAGGCAAGAAAGCACCTAGTGTACGCTGGCTTAAAGATGATAAACACGATGGTATAAGGTTAAGGCATTTAAAGGTATTTACTTGTCTCCATTTCTAGTTAGGTTTTCTCATTGATTGAAATTTTAAGTATTTATATTGAACCTTAGTGGATGTATTCATGCAGAATGTTACTTCTGTGGAATGGCACCGGAAAGGTGACTACTTTTCAACAGTGATGCCAGCGGATATCCTTTATTGTTGATTTATTAGCTAATAATGGTAGTTACATATCTGAATGCGATGATACATGTTTATACATATCATTTTTTCCGTTGAAATAACAATAATGCACTTAAAGGCTCACATACTTATCATTGCACATGTGTGTTACTGCATCATACCTCAGTAGTAGTCTTTATGTCTTTCAACATGGCACGAGTCATCACTGACTTTTGACACATTTAATGACCATTTATCTAGTGAGCTGTTAGCCGTCATGCGATCCCCCTCATTTCATGTAAGATCTGCTTCATCGATGTCTGTAATTACTGTGTGAATAGTTTAGTCATTGACCTCATATAAACAATTTTTTAAACTGCTTCTTGATTAGCAACTTTTAGCTGATTTTTTATCTTAAGGAAAATTTATGAGGCATACAATTTTAAACTTGGGATAGATTTAATGTTTCCTTAACATATTCTTTACGTGAATCAAGATCAGTTCTGATTCACCAGTTGTCCAAGAAACTCTCACAAAAACTTCCTTTCAAGTTACATGGACTTGCTGTTAGATCAACCTTCCATCCATCTCGTTCCATCTTCTTTATTTGTACAAAGAAGACTGTTCGTGTGTTTGATTTATTGAAGTCTAAACAAATAAAAAAGCTTGATACCGGTCTCAAAGAAGCCTCGTCAATTGCAGTCCATCCTGGAGGTATTGTTATTAGTTACGATGAAATTAAATTGTTATCAGTTTTCTTCGATTCATAAATGCACTAAATCATTCATAATAACTGTGTCTATACACACATTCCATGCAGGTGATAATTTAATTGTGGGGAGCAAAGAAGGAAAGCTTTGTTGGTTTGATATGGACCTTTCGTCTAAACCATATAAAGTTCTTAAGTAAGTATTTTCTTGTAGTTAATTGAAAGCAATTCTAAAACTCATGTCATTCTGTTTTGCCAGAGTGCCCTATGCAGATTAAATTATACACCATGTGCTATCAATGCAAATGAATGTTAACTTTTCTGTTGATCTTACATCATGGTTATTATTTTCATTATTTAAATCCGTAATTTCACAACTGTCACCTTTTTTTTACTTTCTTTGTTTCCAATTCCAAAGTTCTGTATAAGAAACCTTGACTTTTTTTTTTTATTGTTTTAATTATTGTGTACAAATCTTTGAAAAATGAGGAACTGATTGCTGTTTAGTTATCGCCATTGCAGAGTTTAGGGGAGGGTTCTGTCTATTGTATTTTACCTTTATTTGAATGATAAAAAAGGTCATTATACTACTTGGAATGTGTGACCTTTCAGCGAAAGGTCACACAACTGCGAGTTCAACTGTTGAGACAAGATTAAAGAAATGAAATTAAAAGCCGACATATTTGTAATTAGAATTAGAAGTAAACACAAATAAGAACATAACCTAGCAAGCCTTAAGTTTGACTTTGTATTTATTTTTCCTTTAGTTTATGGTGAGATTAGTGTTGTGTTCTAAATACCTCTATCTATCATTGATTCATTTTGGATTTAGACTGTACCCATGTCCCGGGAAACACTATTCTTTGAAAAAAGACTACTAAAAAGGAGTGAGAACAAACCAAGTGAGCATGCTTTGCCTGTAACTTGGTGAACTTCTCCAGTACCTAAATAATGAGCTGTTGTTTATTTGATTAGCAGCAATTTGGATAAGAAACATCACTGTCTGCATTTGATGTCATGCCACAGATTTTTTATAACAAGTTGATGTCATTGCAGGTGTCATCCAAAAGATATTAACAACGTTGTCTTTCATCGTTCATATCCCTTGTTTGCTTCGTGCTCAGATGACTGCACTGCATATGTTTTTCACGGAATGGTTTATTCTGATCTCAATAAAAATCCTCTTATTGTTCCTTTGGAAATTCTACGGGGCCATGCAAATTCAAATGGGAGAGGTGAGAATTCTGTTTTTGATTTTGTTAACTTGGTTAAAATATTGTCTGATATTTGGCGTTTGCTCTTCTAGAAGAGCCTCTTTTAGAAGTCAATATCATGGTTTGGGGATTAGTGTTGACAAAAGTTGACATTCATTTTTGTACAAGATTTAGTTCAATTGAATAAGACATTTTTATCTTACCTCTTAAGTTTATTTGCATTGCAGGAATATTGGACTGCAAGTTTCACCCCAGGCAACCCTGGTTATTTACAGCTGGGGCTGACAAGATGATTAAACTTTACTGTCACCACTAA

Protein sequence

>MS.gene00612.t1

MKKKTVVEAEMKKKEEAPPPPSDHDSDDDDSDDSVEDSSADDSSSDSDSDSDSKSELEHEEGASPTTTTTTHHHGSDDNSDSQDEEDVDDSEGGSESSDLHQEGGGAESDSSEDEVAPRNTIGEVPLKWYEDEPHIGYDIKGKKIKKKEREDKLGSFLANVDDSKNWRKVFDEYNDEEVVLTKDEIKMVRKLMQNKAPHSDFDPHPDYVEWFKWDDAKHPLSNAPEPKRRFIPSKWEAKKVVQYVRGIRNGTITFDKPKKEDDSYLLWEDDSGLTEKANHLAYIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMYEEDRPKFIPQRFTSMRSIPAYDNAMKESFERCLDLYLCPRVRRKRLNIDPESLKPKLPNKKELKPYPITCYIEYKGHEGAVTSISIEASGQWMASGSSDGTVRVWEVETGRCLRQWEIGEAVNCVTWNPLSDIHIVAVSAGQDVLLFNTGLGDEEEQQRIKELLLIDSPEASDETGKKAPSVRWLKDDKHDGIRLRHLKNVTSVEWHRKGDYFSTVMPADILYFLIHQLSKKLSQKLPFKLHGLAVRSTFHPSRSIFFICTKKTVRVFDLLKSKQIKKLDTGLKEASSIAVHPGGDNLIVGSKEGKLCWFDMDLSSKPYKVLKCHPKDINNVVFHRSYPLFASCSDDCTAYVFHGMVYSDLNKNPLIVPLEILRGHANSNGRGILDCKFHPRQPWLFTAGADKMIKLYCHH