Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046152.t1 | XP_003592804.1 | 97.9 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.00E+00 | 1209.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046152.t1 | Q9FY49 | 69.7 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 5.7e-253 | 874.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046152.t1 | G7IAW9 | 97.9 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0e+00 | 1209.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene001273 | MS.gene046152 | PPI |
| MS.gene005385 | MS.gene046152 | PPI |
| MS.gene81620 | MS.gene046152 | PPI |
| MS.gene046152 | MS.gene070511 | PPI |
| MS.gene070505 | MS.gene046152 | PPI |
| MS.gene81615 | MS.gene046152 | PPI |
| MS.gene070507 | MS.gene046152 | PPI |
| MS.gene070492 | MS.gene046152 | PPI |
| MS.gene016742 | MS.gene046152 | PPI |
| MS.gene20954 | MS.gene046152 | PPI |
| MS.gene070510 | MS.gene046152 | PPI |
| MS.gene81622 | MS.gene046152 | PPI |
| MS.gene21091 | MS.gene046152 | PPI |
| MS.gene016743 | MS.gene046152 | PPI |
| MS.gene046152 | MS.gene67840 | PPI |
| MS.gene37911 | MS.gene046152 | PPI |
| MS.gene053466 | MS.gene046152 | PPI |
| MS.gene057884 | MS.gene046152 | PPI |
| MS.gene046152 | MS.gene53697 | PPI |
| MS.gene057883 | MS.gene046152 | PPI |
| MS.gene53545 | MS.gene046152 | PPI |
| MS.gene016758 | MS.gene046152 | PPI |
| MS.gene81617 | MS.gene046152 | PPI |
| MS.gene046152 | MS.gene43378 | PPI |
| MS.gene057886 | MS.gene046152 | PPI |
| MS.gene070509 | MS.gene046152 | PPI |
| MS.gene070503 | MS.gene046152 | PPI |
| MS.gene073910 | MS.gene046152 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046152.t1 | MTR_1g116230 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1238 |
| MS.gene046152.t1 | MTR_3g104720 | 27.298 | 359 | 210 | 14 | 120 | 455 | 128 | 458 | 6.04e-20 | 94.7 |
| MS.gene046152.t1 | MTR_8g018790 | 26.724 | 348 | 212 | 14 | 127 | 455 | 4 | 327 | 3.65e-18 | 89.0 |
| MS.gene046152.t1 | MTR_8g018790 | 26.271 | 354 | 218 | 13 | 121 | 455 | 131 | 460 | 4.06e-18 | 89.0 |
| MS.gene046152.t1 | MTR_3g104720 | 29.187 | 209 | 126 | 8 | 260 | 455 | 39 | 238 | 3.65e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046152.t1 | AT5G13520 | 69.692 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 0.0 | 902 |
| MS.gene046152.t1 | AT4G33090 | 25.138 | 362 | 216 | 12 | 119 | 455 | 127 | 458 | 6.46e-20 | 94.7 |
Find 192 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGGGATGTTTGCTTTA+AGG | 0.143966 | 1.3:-79318189 | None:intergenic |
| CACCTTAACCTCATAATCTT+TGG | 0.221536 | 1.3:-79319982 | None:intergenic |
| ATCACAGCCGTCAATTCTTT+TGG | 0.251292 | 1.3:-79316279 | None:intergenic |
| CTGGCAAATGAGTCGGTAAA+TGG | 0.267595 | 1.3:+79318310 | MS.gene046152:CDS |
| AAGGACCAGAGTGAGGGTTT+TGG | 0.268631 | 1.3:-79315933 | None:intergenic |
| GATGATGATGATGAGTGTTT+TGG | 0.272847 | 1.3:+79316336 | MS.gene046152:CDS |
| AGCCATTAGGGTTTGTTATT+CGG | 0.287767 | 1.3:+79316242 | MS.gene046152:CDS |
| TTGACCCCGACGGTTATTAA+AGG | 0.309873 | 1.3:+79316657 | MS.gene046152:CDS |
| CTTCTTCCTCTGCTCTTCAA+TGG | 0.332406 | 1.3:+79316121 | MS.gene046152:CDS |
| ATGGGACTGAGGATATGATT+AGG | 0.334329 | 1.3:+79316529 | MS.gene046152:CDS |
| GCAAATAGGTAAGGTGGAAT+TGG | 0.334855 | 1.3:-79316405 | None:intergenic |
| GGGAGGTGGGGCCCAGGACT+AGG | 0.338745 | 1.3:+79316454 | MS.gene046152:CDS |
| AAAAGAGCCATGTTGAATAT+TGG | 0.341081 | 1.3:+79317667 | MS.gene046152:CDS |
| ATGGTTGGAGAGAGGGAAAA+AGG | 0.341656 | 1.3:-79316021 | None:intergenic |
| AGGGAAGGGGAAAGATTGTT+TGG | 0.345742 | 1.3:+79316549 | MS.gene046152:CDS |
| CTCTTCCACCACTCTACCTT+TGG | 0.353869 | 1.3:-79316367 | None:intergenic |
| CAGTTGGTGAGCTTGATAAC+AGG | 0.359790 | 1.3:+79316433 | MS.gene046152:CDS |
| TGAGAAGCTTCAATAGATTT+CGG | 0.360972 | 1.3:-79318403 | None:intergenic |
| TCAGGACACACCAGCCATTA+GGG | 0.369317 | 1.3:+79316230 | MS.gene046152:CDS |
| CATCAGGGTCAATTCCTTCC+TGG | 0.372777 | 1.3:-79317765 | None:intergenic |
| TGGGACTGAGGATATGATTA+GGG | 0.374830 | 1.3:+79316530 | MS.gene046152:CDS |
| GTCAGGACACACCAGCCATT+AGG | 0.375461 | 1.3:+79316229 | MS.gene046152:CDS |
| TCAACAACACCTTGAGCAAT+AGG | 0.378580 | 1.3:-79320194 | None:intergenic |
| GAGAAAACGTTAAAAGAAGT+TGG | 0.385521 | 1.3:+79320059 | MS.gene046152:CDS |
| TGACCCCGACGGTTATTAAA+GGG | 0.399260 | 1.3:+79316658 | MS.gene046152:CDS |
| ACCTGAGAATACACATCATC+AGG | 0.399303 | 1.3:-79317781 | None:intergenic |
| AGAGAGGTTCAAGGACAATA+TGG | 0.400955 | 1.3:+79317720 | MS.gene046152:CDS |
| GTGAGTTTAGAACCCTTGAT+TGG | 0.402646 | 1.3:-79316048 | None:intergenic |
| ATCCAAAGATTATGAGGTTA+AGG | 0.404774 | 1.3:+79319980 | MS.gene046152:CDS |
| ATCAATCGATTTGAACTTGA+AGG | 0.410059 | 1.3:-79318146 | None:intergenic |
| CCCTTGATTGGGTCGATGGT+TGG | 0.416580 | 1.3:-79316036 | None:intergenic |
| CACCAACTGCAAATGCAAAT+AGG | 0.418291 | 1.3:-79316419 | None:intergenic |
| AACTGGAAACCTTTCTCATA+TGG | 0.422788 | 1.3:-79317805 | None:intergenic |
| AGCAGAGGAAGAAGGGGAGG+TGG | 0.429072 | 1.3:-79316112 | None:intergenic |
| CTCATGAACTTGCTCATAGC+TGG | 0.429580 | 1.3:+79316706 | MS.gene046152:CDS |
| GTTCAATGCGCAACAAGAAC+TGG | 0.434717 | 1.3:-79317822 | None:intergenic |
| GAAATCTATTGAAGCTTCTC+AGG | 0.435996 | 1.3:+79318405 | MS.gene046152:CDS |
| TGCAACCGGTGCACAGGTTG+TGG | 0.437418 | 1.3:+79316683 | MS.gene046152:CDS |
| AGGGAAATGTGAGTGGTTGG+TGG | 0.443335 | 1.3:-79315853 | None:intergenic |
| TCAATCTTATTCTCTATGCC+AGG | 0.444219 | 1.3:-79318205 | None:intergenic |
| TCAGCTGCTAAAGAGTTTGA+TGG | 0.444601 | 1.3:+79316510 | MS.gene046152:CDS |
| CATCCCCTTTAATAACCGTC+GGG | 0.448553 | 1.3:-79316662 | None:intergenic |
| TGACATTGAGTATAGACAAA+AGG | 0.450662 | 1.3:-79316177 | None:intergenic |
| TGGTTGGAGGGGTTTAAATG+AGG | 0.452149 | 1.3:+79317693 | MS.gene046152:CDS |
| TATTGTGCAGGTCTTAGCCT+TGG | 0.452157 | 1.3:+79319935 | MS.gene046152:intron |
| GCCATGTTGAATATTGGAAT+TGG | 0.454549 | 1.3:+79317673 | MS.gene046152:CDS |
| GTGGGAGAGATTTGATTTGT+TGG | 0.456341 | 1.3:+79316581 | MS.gene046152:CDS |
| TCAGGAGTGGGAGCTCTACT+TGG | 0.456702 | 1.3:+79318372 | MS.gene046152:CDS |
| TAAGGTGTCATTTCTCCAAC+GGG | 0.459712 | 1.3:+79319998 | MS.gene046152:CDS |
| GTCTTATATACACTGGAGTC+GGG | 0.472504 | 1.3:-79318277 | None:intergenic |
| AGAACCCTTGATTGGGTCGA+TGG | 0.473280 | 1.3:-79316040 | None:intergenic |
| TCTCAGGTTCCATATGAGAA+AGG | 0.477154 | 1.3:+79317796 | MS.gene046152:CDS |
| CAGTGATGGAGTGGATTTCA+AGG | 0.477695 | 1.3:-79315975 | None:intergenic |
| TCCAACCATCGACCCAATCA+AGG | 0.478388 | 1.3:+79316035 | MS.gene046152:CDS |
| TTCAGAAACTCATCAAATGC+AGG | 0.480159 | 1.3:-79318109 | None:intergenic |
| CCCTGATGATGTGTATTCTC+AGG | 0.481874 | 1.3:+79317780 | MS.gene046152:CDS |
| TGAGTTTAGAACCCTTGATT+GGG | 0.483336 | 1.3:-79316047 | None:intergenic |
| AATATTGGAATTGGTTGGAG+GGG | 0.484685 | 1.3:+79317682 | MS.gene046152:CDS |
| ATCTGAATCCAAAGATTATG+AGG | 0.485915 | 1.3:+79319974 | MS.gene046152:CDS |
| ATAACAGGGAGGTGGGGCCC+AGG | 0.486872 | 1.3:+79316448 | MS.gene046152:CDS |
| GGCCGAATAACAAACCCTAA+TGG | 0.487856 | 1.3:-79316244 | None:intergenic |
| CATTGAAGAGCAGAGGAAGA+AGG | 0.494860 | 1.3:-79316120 | None:intergenic |
| GTTATTAAAGGGGATGCAAC+CGG | 0.495380 | 1.3:+79316669 | MS.gene046152:CDS |
| TGGGTCGATGGTTGGAGAGA+GGG | 0.496813 | 1.3:-79316028 | None:intergenic |
| GGATTGAGAAGGGTCAGTGA+TGG | 0.500891 | 1.3:-79315989 | None:intergenic |
| TCAGCAATTTCATCCTCCCT+TGG | 0.501574 | 1.3:-79318340 | None:intergenic |
| TGAGGATATGATTAGGGAAG+GGG | 0.503195 | 1.3:+79316536 | MS.gene046152:CDS |
| AATTGCTGAGTGGCAAGGTC+AGG | 0.503227 | 1.3:+79318354 | MS.gene046152:CDS |
| ATTGAAGAGCAGAGGAAGAA+GGG | 0.503299 | 1.3:-79316119 | None:intergenic |
| AGGGGATGCAACCGGTGCAC+AGG | 0.505859 | 1.3:+79316677 | MS.gene046152:CDS |
| GCATCCCCTTTAATAACCGT+CGG | 0.506180 | 1.3:-79316663 | None:intergenic |
| GACATTGAGTATAGACAAAA+GGG | 0.506303 | 1.3:-79316176 | None:intergenic |
| TTAGGGTTTGTTATTCGGCC+CGG | 0.506368 | 1.3:+79316247 | MS.gene046152:CDS |
| GAATGTTCCAAAAGAATTGA+CGG | 0.506622 | 1.3:+79316272 | MS.gene046152:CDS |
| GGAGGTGGGGCCCAGGACTA+GGG | 0.506704 | 1.3:+79316455 | MS.gene046152:CDS |
| TTCAGCATAAACCCTAGTCC+TGG | 0.507344 | 1.3:-79316466 | None:intergenic |
| AGGTGTGGTTAGAAAGAGTG+AGG | 0.507367 | 1.3:-79316071 | None:intergenic |
| TACCTATTTGCATTTGCAGT+TGG | 0.507637 | 1.3:+79316417 | MS.gene046152:CDS |
| TGTCTTATATACACTGGAGT+CGG | 0.511411 | 1.3:-79318278 | None:intergenic |
| GAGCTTGATAACAGGGAGGT+GGG | 0.512339 | 1.3:+79316441 | MS.gene046152:CDS |
| AAGAGCAGAGGAAGAAGGGG+AGG | 0.512487 | 1.3:-79316115 | None:intergenic |
| GTGTATGAGTGAGGATCAAC+GGG | 0.513328 | 1.3:-79315817 | None:intergenic |
| TGGCAAATGAGTCGGTAAAT+GGG | 0.513512 | 1.3:+79318311 | MS.gene046152:CDS |
| ATATAAGACAATTGTATCAC+TGG | 0.516027 | 1.3:+79318291 | MS.gene046152:CDS |
| TTATGCAGAGCGGAGGATTG+TGG | 0.516215 | 1.3:+79317627 | MS.gene046152:CDS |
| TTCACCAGTGCAGTGTAAAG+TGG | 0.517047 | 1.3:-79320101 | None:intergenic |
| GAACTTGCTCATAGCTGGAC+TGG | 0.520607 | 1.3:+79316711 | MS.gene046152:CDS |
| CGGTAAATGGGAGGATGCCA+AGG | 0.521443 | 1.3:+79318323 | MS.gene046152:CDS |
| GAACGAGTGTCGAGGAAGAA+AGG | 0.524067 | 1.3:-79315952 | None:intergenic |
| TTGGGTCGATGGTTGGAGAG+AGG | 0.527128 | 1.3:-79316029 | None:intergenic |
| TACCTTCTGTCCACAGTACA+AGG | 0.527979 | 1.3:-79318228 | None:intergenic |
| TTCCTTAAAGCAAACATCCC+TGG | 0.529774 | 1.3:+79318187 | MS.gene046152:CDS |
| TGTTGAATATTGGAATTGGT+TGG | 0.529933 | 1.3:+79317677 | MS.gene046152:CDS |
| CTCCAACGGGCTATTTCATG+CGG | 0.531241 | 1.3:+79320011 | MS.gene046152:CDS |
| CGTGGTGCGTCGCGAATCGT+TGG | 0.532581 | 1.3:+79316314 | MS.gene046152:CDS |
| GGATTCTCCATACCACCATA+AGG | 0.532655 | 1.3:-79316621 | None:intergenic |
| AGTGGTGGAAGAGTTTGAGA+TGG | 0.533645 | 1.3:+79316377 | MS.gene046152:CDS |
| GAAGCATGAATGGTTGAAGA+TGG | 0.537383 | 1.3:-79315895 | None:intergenic |
| AGCTTGATAACAGGGAGGTG+GGG | 0.541507 | 1.3:+79316442 | MS.gene046152:CDS |
| GGGATTGGAGTGGATTGAGA+AGG | 0.542508 | 1.3:-79316000 | None:intergenic |
| AGGATTGTGGAGGCTGTACA+AGG | 0.543120 | 1.3:+79317640 | MS.gene046152:CDS |
| TTAAGGTGTCATTTCTCCAA+CGG | 0.543544 | 1.3:+79319997 | MS.gene046152:CDS |
| ATACCACCATAAGGAAAACT+AGG | 0.544779 | 1.3:-79316612 | None:intergenic |
| CAGCTGCTAAAGAGTTTGAT+GGG | 0.545330 | 1.3:+79316511 | MS.gene046152:CDS |
| GAAGAGTGCAGAAGCATGAA+TGG | 0.547456 | 1.3:-79315905 | None:intergenic |
| CTGAGGATATGATTAGGGAA+GGG | 0.548838 | 1.3:+79316535 | MS.gene046152:CDS |
| GGGAAATGTGAGTGGTTGGT+GGG | 0.549128 | 1.3:-79315852 | None:intergenic |
| GAATATTGGAATTGGTTGGA+GGG | 0.549610 | 1.3:+79317681 | MS.gene046152:CDS |
| CCGTCCACTTTACACTGCAC+TGG | 0.552455 | 1.3:+79320097 | MS.gene046152:CDS |
| GTGAGGGAAATGTGAGTGGT+TGG | 0.552782 | 1.3:-79315856 | None:intergenic |
| GAAAACAGAACGGACATGAA+TGG | 0.555134 | 1.3:-79316202 | None:intergenic |
| CTTGTTGCGCATTGAACGTG+AGG | 0.557122 | 1.3:+79317828 | MS.gene046152:CDS |
| TCGGGCTCAAAAGCATCAGA+TGG | 0.557199 | 1.3:-79318259 | None:intergenic |
| GAATAACAAACCCTAATGGC+TGG | 0.558142 | 1.3:-79316240 | None:intergenic |
| AAAAGAATTGACGGCTGTGA+TGG | 0.558281 | 1.3:+79316281 | MS.gene046152:CDS |
| ATTGTTTGGAAATTATGAGT+GGG | 0.560386 | 1.3:+79316563 | MS.gene046152:CDS |
| AAACGTTAAAAGAAGTTGGA+AGG | 0.561275 | 1.3:+79320063 | MS.gene046152:CDS |
| TGAATATTGGAATTGGTTGG+AGG | 0.561291 | 1.3:+79317680 | MS.gene046152:CDS |
| TGAAGCTGCGCCTCAACTGT+TGG | 0.561608 | 1.3:+79316485 | MS.gene046152:CDS |
| GGATTGGAGTGGATTGAGAA+GGG | 0.561965 | 1.3:-79315999 | None:intergenic |
| TGAGGATGTAGAGAGGTTCA+AGG | 0.565967 | 1.3:+79317711 | MS.gene046152:CDS |
| GAGAAGGGTCAGTGATGGAG+TGG | 0.567983 | 1.3:-79315984 | None:intergenic |
| TGAGCTTGATAACAGGGAGG+TGG | 0.570830 | 1.3:+79316440 | MS.gene046152:CDS |
| GCAAATGCAAATAGGTAAGG+TGG | 0.574543 | 1.3:-79316411 | None:intergenic |
| TGTTTGCTTTAAGGAAGTCA+AGG | 0.574551 | 1.3:-79318180 | None:intergenic |
| GGTGGTGTAAGTGATGAGAA+AGG | 0.577397 | 1.3:-79316094 | None:intergenic |
| TGTTACCATCCTATTGCTCA+AGG | 0.578149 | 1.3:+79320185 | MS.gene046152:CDS |
| TTGAAGAGCAGAGGAAGAAG+GGG | 0.580264 | 1.3:-79316118 | None:intergenic |
| TACAATTGTCTTATATACAC+TGG | 0.582319 | 1.3:-79318284 | None:intergenic |
| CTGAGTGGCAAGGTCAGGAG+TGG | 0.584567 | 1.3:+79318359 | MS.gene046152:CDS |
| ATGAGCCACAACCTGTGCAC+CGG | 0.585437 | 1.3:-79316688 | None:intergenic |
| TGTATCACTGGCAAATGAGT+CGG | 0.586369 | 1.3:+79318303 | MS.gene046152:CDS |
| AGGAAGAAAGGACCAGAGTG+AGG | 0.587311 | 1.3:-79315940 | None:intergenic |
| GGAAATCTAAGTAGAGTGTG+AGG | 0.587348 | 1.3:-79315873 | None:intergenic |
| GTTTAAATGAGGATGTAGAG+AGG | 0.589075 | 1.3:+79317704 | MS.gene046152:CDS |
| GATTGTTTGGAAATTATGAG+TGG | 0.590199 | 1.3:+79316562 | MS.gene046152:CDS |
| AAGCATGAATGGTTGAAGAT+GGG | 0.591646 | 1.3:-79315894 | None:intergenic |
| ACTGAGGATATGATTAGGGA+AGG | 0.591906 | 1.3:+79316534 | MS.gene046152:CDS |
| ACTGCAAATGCAAATAGGTA+AGG | 0.591923 | 1.3:-79316414 | None:intergenic |
| TCAGCATAAACCCTAGTCCT+GGG | 0.593338 | 1.3:-79316465 | None:intergenic |
| TAGTTTGTAGCGTGAATCCA+AGG | 0.594849 | 1.3:-79319952 | None:intergenic |
| GACCTTGTACTGTGGACAGA+AGG | 0.594960 | 1.3:+79318226 | MS.gene046152:CDS |
| GGTGTGGTTAGAAAGAGTGA+GGG | 0.595482 | 1.3:-79316070 | None:intergenic |
| ATAAGATTGACCTTGTACTG+TGG | 0.602282 | 1.3:+79318218 | MS.gene046152:CDS |
| CAATCTTATTCTCTATGCCA+GGG | 0.602858 | 1.3:-79318204 | None:intergenic |
| GACCCCGACGGTTATTAAAG+GGG | 0.605150 | 1.3:+79316659 | MS.gene046152:CDS |
| ATGGCTGGTGTGTCCTGACA+AGG | 0.606492 | 1.3:-79316225 | None:intergenic |
| TATTGCTCAAGGTGTTGTTG+AGG | 0.607471 | 1.3:+79320196 | MS.gene046152:CDS |
| TAAGAGCCATTGAAGAGCAG+AGG | 0.607807 | 1.3:-79316127 | None:intergenic |
| GGTAAATGGGAGGATGCCAA+GGG | 0.608195 | 1.3:+79318324 | MS.gene046152:CDS |
| GGAAGAAAGGACCAGAGTGA+GGG | 0.608235 | 1.3:-79315939 | None:intergenic |
| GTACTGTGGACAGAAGGTAC+TGG | 0.608281 | 1.3:+79318232 | MS.gene046152:CDS |
| ATGGTGGTATGGAGAATCCA+AGG | 0.609099 | 1.3:+79316625 | MS.gene046152:CDS |
| GCAGCTGAATCCAACAGTTG+AGG | 0.610214 | 1.3:-79316495 | None:intergenic |
| GATGAAATTGCTGAGTGGCA+AGG | 0.610794 | 1.3:+79318349 | MS.gene046152:CDS |
| CAACACCTTGAGCAATAGGA+TGG | 0.611866 | 1.3:-79320190 | None:intergenic |
| ACTCTCCAAAACCCTCACTC+TGG | 0.614596 | 1.3:+79315928 | MS.gene046152:CDS |
| AATCGATTTGAACTTGAAGG+TGG | 0.615528 | 1.3:-79318143 | None:intergenic |
| AAATGGGAGGATGCCAAGGG+AGG | 0.627760 | 1.3:+79318327 | MS.gene046152:CDS |
| CCAACCATCGACCCAATCAA+GGG | 0.629595 | 1.3:+79316036 | MS.gene046152:CDS |
| TGTGTATGAGTGAGGATCAA+CGG | 0.632074 | 1.3:-79315818 | None:intergenic |
| CGGGCTCAAAAGCATCAGAT+GGG | 0.632935 | 1.3:-79318258 | None:intergenic |
| TTCGTCCAAAGGTAGAGTGG+TGG | 0.634737 | 1.3:+79316362 | MS.gene046152:CDS |
| TCACTACTTATGCAGAGCGG+AGG | 0.636175 | 1.3:+79317620 | MS.gene046152:CDS |
| AAGTGATGAGAAAGGAGGTG+TGG | 0.636386 | 1.3:-79316086 | None:intergenic |
| TGAGTGGCAAGGTCAGGAGT+GGG | 0.641061 | 1.3:+79318360 | MS.gene046152:CDS |
| GTTGAGTCTGTGTATGAGTG+AGG | 0.642736 | 1.3:-79315826 | None:intergenic |
| AGTTGGTGAGCTTGATAACA+GGG | 0.645497 | 1.3:+79316434 | MS.gene046152:CDS |
| CCTGAGAATACACATCATCA+GGG | 0.646341 | 1.3:-79317780 | None:intergenic |
| GAATTCGTCCAAAGGTAGAG+TGG | 0.646482 | 1.3:+79316359 | MS.gene046152:CDS |
| CAAAGCTTACTATAGCGAAG+TGG | 0.648966 | 1.3:+79320037 | MS.gene046152:CDS |
| AGTGATGGAGTGGATTTCAA+GGG | 0.649580 | 1.3:-79315974 | None:intergenic |
| CCAGTGCAGTGTAAAGTGGA+CGG | 0.649830 | 1.3:-79320097 | None:intergenic |
| GAGTGTGAGGGAAATGTGAG+TGG | 0.652886 | 1.3:-79315860 | None:intergenic |
| GAAATCTAAGTAGAGTGTGA+GGG | 0.656090 | 1.3:-79315872 | None:intergenic |
| TTTCAAGGGAACGAGTGTCG+AGG | 0.658695 | 1.3:-79315960 | None:intergenic |
| TAAAGAGTTTGATGGGACTG+AGG | 0.660055 | 1.3:+79316518 | MS.gene046152:CDS |
| TGCAGAGCGGAGGATTGTGG+AGG | 0.661106 | 1.3:+79317630 | MS.gene046152:CDS |
| ATCCCCTTTAATAACCGTCG+GGG | 0.664328 | 1.3:-79316661 | None:intergenic |
| ACCAATTCCAATATTCAACA+TGG | 0.671117 | 1.3:-79317674 | None:intergenic |
| CCTGACAAGGGAAAACAGAA+CGG | 0.671630 | 1.3:-79316212 | None:intergenic |
| CAAATGAGTCGGTAAATGGG+AGG | 0.681045 | 1.3:+79318314 | MS.gene046152:CDS |
| ATCCGCATGAAATAGCCCGT+TGG | 0.682282 | 1.3:-79320013 | None:intergenic |
| TGGCTGGTGTGTCCTGACAA+GGG | 0.699195 | 1.3:-79316224 | None:intergenic |
| GGTGTAAGTGATGAGAAAGG+AGG | 0.699630 | 1.3:-79316091 | None:intergenic |
| ACTGCACTGGTGAAAGACAG+TGG | 0.714971 | 1.3:+79320110 | MS.gene046152:CDS |
| TGGTATGGAGAATCCAAGGA+TGG | 0.719290 | 1.3:+79316629 | MS.gene046152:CDS |
| CCACCATAAGGAAAACTAGG+TGG | 0.722795 | 1.3:-79316609 | None:intergenic |
| TGTGATGGCTGCAAAACACG+TGG | 0.723313 | 1.3:+79316296 | MS.gene046152:CDS |
| GGGAGGATGAAATTGCTGAG+TGG | 0.740524 | 1.3:+79318344 | MS.gene046152:CDS |
| TGGTGAGCTTGATAACAGGG+AGG | 0.768194 | 1.3:+79316437 | MS.gene046152:CDS |
| GATTCACTACTTATGCAGAG+CGG | 0.818951 | 1.3:+79317617 | MS.gene046152:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATTAATATAAAGCT+CGG | + | chr1.3:79319878-79319897 | MS.gene046152:intron | 15.0% |
| !! | CTTAAAAATAAATTATGCTT+GGG | - | chr1.3:79319643-79319662 | None:intergenic | 15.0% |
| !! | TCTTAAAAATAAATTATGCT+TGG | - | chr1.3:79319644-79319663 | None:intergenic | 15.0% |
| !!! | AATGTAAGCTTTATAAATAT+AGG | - | chr1.3:79317876-79317895 | None:intergenic | 15.0% |
| !!! | ATAATATATACTTTCTTTTC+TGG | + | chr1.3:79319727-79319746 | MS.gene046152:intron | 15.0% |
| !!! | GTTAATATAATTTTTCATTC+TGG | - | chr1.3:79318545-79318564 | None:intergenic | 15.0% |
| !! | ATAGTAAAATGAGTTAATGA+AGG | - | chr1.3:79318798-79318817 | None:intergenic | 20.0% |
| !! | ATCAAAGGTTAAATATTTGA+TGG | - | chr1.3:79319564-79319583 | None:intergenic | 20.0% |
| !! | GTAACTAATATGAAAACAAT+TGG | + | chr1.3:79316955-79316974 | MS.gene046152:intron | 20.0% |
| !! | TAATATAATGACCAACATAA+TGG | - | chr1.3:79319775-79319794 | None:intergenic | 20.0% |
| !! | TTAAAACACGAAAAATAATC+AGG | - | chr1.3:79317909-79317928 | None:intergenic | 20.0% |
| !!! | AAAAACATTGATTTTTCCTA+CGG | + | chr1.3:79318571-79318590 | MS.gene046152:intron | 20.0% |
| !!! | ACTTGTACTTTATTTATTAG+TGG | + | chr1.3:79318056-79318075 | MS.gene046152:intron | 20.0% |
| !!! | ATATAATTTTTCATTCTGGT+AGG | - | chr1.3:79318541-79318560 | None:intergenic | 20.0% |
| !!! | TTTTTATATTGCTTCATAGA+TGG | + | chr1.3:79319251-79319270 | MS.gene046152:intron | 20.0% |
| ! | AGATAAAGATTCCAAAACAA+AGG | - | chr1.3:79317434-79317453 | None:intergenic | 25.0% |
| ! | AGTAAAAGAAATGAAAGGAA+AGG | - | chr1.3:79318845-79318864 | None:intergenic | 25.0% |
| ! | AGTAAGTAGAATGAAATCAA+GGG | - | chr1.3:79319108-79319127 | None:intergenic | 25.0% |
| ! | AGTAAGTTAGACTATTGAAA+TGG | + | chr1.3:79319080-79319099 | MS.gene046152:intron | 25.0% |
| ! | ATAATTAATATAAAGCTCGG+TGG | + | chr1.3:79319881-79319900 | MS.gene046152:intron | 25.0% |
| ! | ATATAAGACAATTGTATCAC+TGG | + | chr1.3:79318291-79318310 | MS.gene046152:CDS | 25.0% |
| ! | ATATGGTCTGGAAAATATAT+AGG | + | chr1.3:79319285-79319304 | MS.gene046152:intron | 25.0% |
| ! | ATTGTTTGGAAATTATGAGT+GGG | + | chr1.3:79316563-79316582 | MS.gene046152:CDS | 25.0% |
| ! | ATTTATAGAACTGAAAGCTA+AGG | - | chr1.3:79319326-79319345 | None:intergenic | 25.0% |
| ! | CACAAATACTAAAGCAATTA+AGG | - | chr1.3:79317086-79317105 | None:intergenic | 25.0% |
| ! | TACAATTGTCTTATATACAC+TGG | - | chr1.3:79318287-79318306 | None:intergenic | 25.0% |
| ! | TATGTTGTATAATATTGTGC+AGG | + | chr1.3:79319923-79319942 | MS.gene046152:intron | 25.0% |
| ! | TTTAAAGGTTCATATTTCAG+AGG | - | chr1.3:79319612-79319631 | None:intergenic | 25.0% |
| !! | AAAGGTCAAATGTTTAACTT+TGG | - | chr1.3:79317568-79317587 | None:intergenic | 25.0% |
| !! | AAATATTTGATGGCTAACTT+AGG | - | chr1.3:79319554-79319573 | None:intergenic | 25.0% |
| !! | CAATGCATATTTTGTCATAT+TGG | + | chr1.3:79318027-79318046 | MS.gene046152:intron | 25.0% |
| !! | GCAAAGGTTACATTTTTAAT+TGG | - | chr1.3:79317361-79317380 | None:intergenic | 25.0% |
| !! | TCTTTGCTAGTTTATTTCAT+TGG | + | chr1.3:79317475-79317494 | MS.gene046152:intron | 25.0% |
| !! | TTATATTGCTCTTTTGCTTT+TGG | + | chr1.3:79319818-79319837 | MS.gene046152:intron | 25.0% |
| !! | TTGTTTTCCTAAACTATTAC+GGG | - | chr1.3:79316932-79316951 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCCTAAACTATTA+CGG | - | chr1.3:79316933-79316952 | None:intergenic | 25.0% |
| !!! | TATATACTTTCTTTTCTGGT+AGG | + | chr1.3:79319731-79319750 | MS.gene046152:intron | 25.0% |
| !!! | TGTTTTTTGTTGAAAGTTTG+AGG | - | chr1.3:79316156-79316175 | None:intergenic | 25.0% |
| AAAAGAGCCATGTTGAATAT+TGG | + | chr1.3:79317667-79317686 | MS.gene046152:CDS | 30.0% | |
| AAACGTTAAAAGAAGTTGGA+AGG | + | chr1.3:79320063-79320082 | MS.gene046152:CDS | 30.0% | |
| AACAGAAAGAGAATAAAGAG+GGG | - | chr1.3:79318869-79318888 | None:intergenic | 30.0% | |
| AACATGCAAACTGTAAAAAC+CGG | - | chr1.3:79317278-79317297 | None:intergenic | 30.0% | |
| AAGAATGCAAAAACTAGCAA+AGG | - | chr1.3:79317377-79317396 | None:intergenic | 30.0% | |
| AAGCTAAAAAATAACCAGGA+AGG | + | chr1.3:79317751-79317770 | MS.gene046152:CDS | 30.0% | |
| AATCAACAATGACGACTTAA+AGG | - | chr1.3:79317586-79317605 | None:intergenic | 30.0% | |
| AATTTATCAAATAGCAGCCA+TGG | + | chr1.3:79318890-79318909 | MS.gene046152:intron | 30.0% | |
| ACCAATTCCAATATTCAACA+TGG | - | chr1.3:79317677-79317696 | None:intergenic | 30.0% | |
| ACGTTTAATGGCAGAAATAA+TGG | + | chr1.3:79318977-79318996 | MS.gene046152:intron | 30.0% | |
| AGAAAAATCACTACAGAAAC+AGG | + | chr1.3:79317227-79317246 | MS.gene046152:intron | 30.0% | |
| ATCAAAGTTGTGATCATCAA+AGG | - | chr1.3:79319579-79319598 | None:intergenic | 30.0% | |
| ATCCAAAGATTATGAGGTTA+AGG | + | chr1.3:79319980-79319999 | MS.gene046152:CDS | 30.0% | |
| ATCTGAATCCAAAGATTATG+AGG | + | chr1.3:79319974-79319993 | MS.gene046152:CDS | 30.0% | |
| ATTCCAAAACAAAGGTTTCT+TGG | - | chr1.3:79317426-79317445 | None:intergenic | 30.0% | |
| CAGTAAGTAGAATGAAATCA+AGG | - | chr1.3:79319109-79319128 | None:intergenic | 30.0% | |
| CTAGTCTGAAAATTTACTTG+TGG | + | chr1.3:79317167-79317186 | MS.gene046152:intron | 30.0% | |
| CTAGTGTCATACATTTCTAT+TGG | + | chr1.3:79319349-79319368 | MS.gene046152:intron | 30.0% | |
| GAACAGAAAGAGAATAAAGA+GGG | - | chr1.3:79318870-79318889 | None:intergenic | 30.0% | |
| GAATGTTCCAAAAGAATTGA+CGG | + | chr1.3:79316272-79316291 | MS.gene046152:CDS | 30.0% | |
| GACATTGAGTATAGACAAAA+GGG | - | chr1.3:79316179-79316198 | None:intergenic | 30.0% | |
| GACTAAGCTAAAAAATAACC+AGG | + | chr1.3:79317747-79317766 | MS.gene046152:CDS | 30.0% | |
| GAGAAAACGTTAAAAGAAGT+TGG | + | chr1.3:79320059-79320078 | MS.gene046152:CDS | 30.0% | |
| GATTGTTTGGAAATTATGAG+TGG | + | chr1.3:79316562-79316581 | MS.gene046152:CDS | 30.0% | |
| TCTTAAGTTCTCAACAACTA+TGG | - | chr1.3:79318472-79318491 | None:intergenic | 30.0% | |
| TGAACAGAAAGAGAATAAAG+AGG | - | chr1.3:79318871-79318890 | None:intergenic | 30.0% | |
| TGACATTGAGTATAGACAAA+AGG | - | chr1.3:79316180-79316199 | None:intergenic | 30.0% | |
| TGAGAAGCTTCAATAGATTT+CGG | - | chr1.3:79318406-79318425 | None:intergenic | 30.0% | |
| TGTTGAATATTGGAATTGGT+TGG | + | chr1.3:79317677-79317696 | MS.gene046152:CDS | 30.0% | |
| ! | ACAAGACCAATGAACATTTT+TGG | + | chr1.3:79316748-79316767 | MS.gene046152:CDS | 30.0% |
| ! | ACTCATTTTACTATTACTGC+TGG | + | chr1.3:79318804-79318823 | MS.gene046152:intron | 30.0% |
| ! | AGCAATTAAGGCTATGTTTT+TGG | - | chr1.3:79317074-79317093 | None:intergenic | 30.0% |
| ! | ATCAATCAAGTTGCCAAATA+AGG | - | chr1.3:79318673-79318692 | None:intergenic | 30.0% |
| ! | GCAATTAAGGCTATGTTTTT+GGG | - | chr1.3:79317073-79317092 | None:intergenic | 30.0% |
| ! | GTCAAATGTTTAACTTTGGT+AGG | - | chr1.3:79317564-79317583 | None:intergenic | 30.0% |
| ! | GTTTATTTCATTGGTTGACA+TGG | + | chr1.3:79317484-79317503 | MS.gene046152:intron | 30.0% |
| ! | TCAATCAAGTTGCCAAATAA+GGG | - | chr1.3:79318672-79318691 | None:intergenic | 30.0% |
| ! | TGTTTTCCTAAACTATTACG+GGG | - | chr1.3:79316931-79316950 | None:intergenic | 30.0% |
| ! | TTATTATATATGTGCTGCTC+CGG | + | chr1.3:79317256-79317275 | MS.gene046152:intron | 30.0% |
| ! | TTCTACTTACTGACTAGAAT+AGG | + | chr1.3:79319117-79319136 | MS.gene046152:intron | 30.0% |
| ! | TTTTGCATTCTTCCTTTGAT+TGG | + | chr1.3:79317385-79317404 | MS.gene046152:intron | 30.0% |
| ! | TTTTTGTTGAAAGTTTGAGG+AGG | - | chr1.3:79316153-79316172 | None:intergenic | 30.0% |
| !! | AAACCAAGAAACCTTTGTTT+TGG | + | chr1.3:79317420-79317439 | MS.gene046152:intron | 30.0% |
| !! | ATCAATCGATTTGAACTTGA+AGG | - | chr1.3:79318149-79318168 | None:intergenic | 30.0% |
| !! | ATGAGCTGCTCATTTTTATA+TGG | + | chr1.3:79318702-79318721 | MS.gene046152:intron | 30.0% |
| !! | ATGATGATGATGAGTGTTTT+GGG | + | chr1.3:79316337-79316356 | MS.gene046152:CDS | 30.0% |
| !! | CATTGTTGATTGTGGTTTTA+GGG | + | chr1.3:79317595-79317614 | MS.gene046152:intron | 30.0% |
| !! | TCATTGTTGATTGTGGTTTT+AGG | + | chr1.3:79317594-79317613 | MS.gene046152:intron | 30.0% |
| !!! | AAATAGCTGATTTTTTGCCA+TGG | + | chr1.3:79319004-79319023 | MS.gene046152:intron | 30.0% |
| !!! | ATTCTTTTGGAACATTCAAC+CGG | - | chr1.3:79316269-79316288 | None:intergenic | 30.0% |
| !!! | TCATTTGCTGTTTTTGTTCT+GGG | + | chr1.3:79317996-79318015 | MS.gene046152:intron | 30.0% |
| !!! | TCTTATCGATTTTGGATAGT+GGG | - | chr1.3:79319030-79319049 | None:intergenic | 30.0% |
| !!! | TTCATTTGCTGTTTTTGTTC+TGG | + | chr1.3:79317995-79318014 | MS.gene046152:intron | 30.0% |
| AACTGATCACTACATGTTTG+TGG | + | chr1.3:79318764-79318783 | MS.gene046152:intron | 35.0% | |
| AACTGGAAACCTTTCTCATA+TGG | - | chr1.3:79317808-79317827 | None:intergenic | 35.0% | |
| AAGCATGAATGGTTGAAGAT+GGG | - | chr1.3:79315897-79315916 | None:intergenic | 35.0% | |
| AATATTGGAATTGGTTGGAG+GGG | + | chr1.3:79317682-79317701 | MS.gene046152:CDS | 35.0% | |
| ACATTGTATGTGCCCTTATT+TGG | + | chr1.3:79318657-79318676 | MS.gene046152:intron | 35.0% | |
| ACTGCAAATGCAAATAGGTA+AGG | - | chr1.3:79316417-79316436 | None:intergenic | 35.0% | |
| AGAATAAGAATGAGCAGCAT+GGG | - | chr1.3:79319703-79319722 | None:intergenic | 35.0% | |
| AGATGGAGAGATGTGATATA+TGG | + | chr1.3:79319268-79319287 | MS.gene046152:intron | 35.0% | |
| AGTATTTGTGTGTCTGCAAA+TGG | + | chr1.3:79317096-79317115 | MS.gene046152:intron | 35.0% | |
| ATAAGATTGACCTTGTACTG+TGG | + | chr1.3:79318218-79318237 | MS.gene046152:CDS | 35.0% | |
| ATACCACCATAAGGAAAACT+AGG | - | chr1.3:79316615-79316634 | None:intergenic | 35.0% | |
| CAATCTTATTCTCTATGCCA+GGG | - | chr1.3:79318207-79318226 | None:intergenic | 35.0% | |
| CACCTTAACCTCATAATCTT+TGG | - | chr1.3:79319985-79320004 | None:intergenic | 35.0% | |
| CACTGTCATCCTTTACAAAT+TGG | - | chr1.3:79318952-79318971 | None:intergenic | 35.0% | |
| CAGTTCATATGCCATTATGT+TGG | + | chr1.3:79319761-79319780 | MS.gene046152:intron | 35.0% | |
| CATAAGCAAACCAGAATATG+AGG | - | chr1.3:79317130-79317149 | None:intergenic | 35.0% | |
| CTACATATGCTTGCCAAAAA+TGG | - | chr1.3:79320222-79320241 | None:intergenic | 35.0% | |
| GAAATCTAAGTAGAGTGTGA+GGG | - | chr1.3:79315875-79315894 | None:intergenic | 35.0% | |
| GAAATCTATTGAAGCTTCTC+AGG | + | chr1.3:79318405-79318424 | MS.gene046152:CDS | 35.0% | |
| GAATATTGGAATTGGTTGGA+GGG | + | chr1.3:79317681-79317700 | MS.gene046152:CDS | 35.0% | |
| GCCATGTTGAATATTGGAAT+TGG | + | chr1.3:79317673-79317692 | MS.gene046152:CDS | 35.0% | |
| GGAGCAGCACATATATAATA+AGG | - | chr1.3:79317257-79317276 | None:intergenic | 35.0% | |
| GGATTTGATATGTTAGTCAC+TGG | + | chr1.3:79319370-79319389 | MS.gene046152:intron | 35.0% | |
| GGGGAAGTAAAAGAAATGAA+AGG | - | chr1.3:79318850-79318869 | None:intergenic | 35.0% | |
| GTATACCTTTCGTACATGTT+TGG | + | chr1.3:79316798-79316817 | MS.gene046152:intron | 35.0% | |
| GTATTTGTGTGTCTGCAAAT+GGG | + | chr1.3:79317097-79317116 | MS.gene046152:intron | 35.0% | |
| GTTGAGCCAAAAATGTTCAT+TGG | - | chr1.3:79316757-79316776 | None:intergenic | 35.0% | |
| GTTTAAATGAGGATGTAGAG+AGG | + | chr1.3:79317704-79317723 | MS.gene046152:CDS | 35.0% | |
| TAAGTTCTCAACAACTATGG+CGG | - | chr1.3:79318469-79318488 | None:intergenic | 35.0% | |
| TACAAATTGGCCATAGCAAT+AGG | - | chr1.3:79318939-79318958 | None:intergenic | 35.0% | |
| TACCTATTTGCATTTGCAGT+TGG | + | chr1.3:79316417-79316436 | MS.gene046152:CDS | 35.0% | |
| TAGAATAAGAATGAGCAGCA+TGG | - | chr1.3:79319704-79319723 | None:intergenic | 35.0% | |
| TCAATCCAAACATGTACGAA+AGG | - | chr1.3:79316806-79316825 | None:intergenic | 35.0% | |
| TCAATCTTATTCTCTATGCC+AGG | - | chr1.3:79318208-79318227 | None:intergenic | 35.0% | |
| TCCAAAAGAAAGCCAATCAA+AGG | - | chr1.3:79317400-79317419 | None:intergenic | 35.0% | |
| TCCACTTTAAGCTCTTCAAA+AGG | + | chr1.3:79319841-79319860 | MS.gene046152:intron | 35.0% | |
| TCTTGCGAAATGTACAGATT+GGG | + | chr1.3:79318083-79318102 | MS.gene046152:intron | 35.0% | |
| TGAATATTGGAATTGGTTGG+AGG | + | chr1.3:79317680-79317699 | MS.gene046152:CDS | 35.0% | |
| TGGTTGACATGGAGAAAAAT+TGG | + | chr1.3:79317495-79317514 | MS.gene046152:intron | 35.0% | |
| TGTCTTATATACACTGGAGT+CGG | - | chr1.3:79318281-79318300 | None:intergenic | 35.0% | |
| TTAAGATCAACATCCTACCT+AGG | + | chr1.3:79318486-79318505 | MS.gene046152:intron | 35.0% | |
| TTACTATTACTGCTGGTCAT+GGG | + | chr1.3:79318811-79318830 | MS.gene046152:intron | 35.0% | |
| TTCAGAAACTCATCAAATGC+AGG | - | chr1.3:79318112-79318131 | None:intergenic | 35.0% | |
| TTCTCGTTATGTGTATAACG+AGG | - | chr1.3:79317211-79317230 | None:intergenic | 35.0% | |
| TTCTTGCGAAATGTACAGAT+TGG | + | chr1.3:79318082-79318101 | MS.gene046152:intron | 35.0% | |
| TTGCTATGGCCAATTTGTAA+AGG | + | chr1.3:79318940-79318959 | MS.gene046152:intron | 35.0% | |
| TTTACTATTACTGCTGGTCA+TGG | + | chr1.3:79318810-79318829 | MS.gene046152:intron | 35.0% | |
| ! | ATATAAAGGAGGTTTGGTAG+TGG | - | chr1.3:79319678-79319697 | None:intergenic | 35.0% |
| ! | TAAGTCGTCATTGTTGATTG+TGG | + | chr1.3:79317587-79317606 | MS.gene046152:intron | 35.0% |
| ! | TAGTTTTCCTTATGGTGGTA+TGG | + | chr1.3:79316614-79316633 | MS.gene046152:CDS | 35.0% |
| ! | TATTGTCGCTTCATCATTGT+AGG | + | chr1.3:79317304-79317323 | MS.gene046152:intron | 35.0% |
| ! | TCTTGAGAATTGGTTGTTTC+TGG | + | chr1.3:79319164-79319183 | MS.gene046152:intron | 35.0% |
| ! | TGAGTTTAGAACCCTTGATT+GGG | - | chr1.3:79316050-79316069 | None:intergenic | 35.0% |
| ! | TTAATATAAAGCTCGGTGGA+AGG | + | chr1.3:79319885-79319904 | MS.gene046152:intron | 35.0% |
| !! | AATCGATTTGAACTTGAAGG+TGG | - | chr1.3:79318146-79318165 | None:intergenic | 35.0% |
| !! | ACAATATTGAAGAGTGCTTC+AGG | + | chr1.3:79319404-79319423 | MS.gene046152:intron | 35.0% |
| !! | AGCCATTAGGGTTTGTTATT+CGG | + | chr1.3:79316242-79316261 | MS.gene046152:CDS | 35.0% |
| !! | GATGATGATGATGAGTGTTT+TGG | + | chr1.3:79316336-79316355 | MS.gene046152:CDS | 35.0% |
| !! | TCCTTTTGAAGAGCTTAAAG+TGG | - | chr1.3:79319845-79319864 | None:intergenic | 35.0% |
| !! | TGTTTGCTTTAAGGAAGTCA+AGG | - | chr1.3:79318183-79318202 | None:intergenic | 35.0% |
| !! | TTAAGGTGTCATTTCTCCAA+CGG | + | chr1.3:79319997-79320016 | MS.gene046152:CDS | 35.0% |
| !!! | GCTTGGGTGTATTGTTTTAA+AGG | - | chr1.3:79319627-79319646 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGCCTATTGCTA+TGG | + | chr1.3:79318926-79318945 | MS.gene046152:intron | 35.0% |
| !!! | GTCTTATCGATTTTGGATAG+TGG | - | chr1.3:79319031-79319050 | None:intergenic | 35.0% |
| !!! | TCCTTTGATTGGCTTTCTTT+TGG | + | chr1.3:79317396-79317415 | MS.gene046152:intron | 35.0% |
| !!! | TTCTTTTGGAACATTCAACC+GGG | - | chr1.3:79316268-79316287 | None:intergenic | 35.0% |
| AAAAGAATTGACGGCTGTGA+TGG | + | chr1.3:79316281-79316300 | MS.gene046152:CDS | 40.0% | |
| ACAACTCCCCGTAATAGTTT+AGG | + | chr1.3:79316922-79316941 | MS.gene046152:intron | 40.0% | |
| ACACCAGAAAGAATCCTAGA+CGG | - | chr1.3:79319059-79319078 | None:intergenic | 40.0% | |
| ACCTGAGAATACACATCATC+AGG | - | chr1.3:79317784-79317803 | None:intergenic | 40.0% | |
| ACTGAGGATATGATTAGGGA+AGG | + | chr1.3:79316534-79316553 | MS.gene046152:CDS | 40.0% | |
| AGAGAGGTTCAAGGACAATA+TGG | + | chr1.3:79317720-79317739 | MS.gene046152:CDS | 40.0% | |
| AGCCTCAGAAAAAAGTCTCT+TGG | - | chr1.3:79320159-79320178 | None:intergenic | 40.0% | |
| ATCAACATCCTACCTAGGAT+CGG | + | chr1.3:79318491-79318510 | MS.gene046152:intron | 40.0% | |
| ATGGGACTGAGGATATGATT+AGG | + | chr1.3:79316529-79316548 | MS.gene046152:CDS | 40.0% | |
| ATGTGTCTGCTCTTGAGAAT+TGG | + | chr1.3:79319154-79319173 | MS.gene046152:intron | 40.0% | |
| ATTGAAGAGCAGAGGAAGAA+GGG | - | chr1.3:79316122-79316141 | None:intergenic | 40.0% | |
| CAAAATTGCTGCACTCTTAG+AGG | + | chr1.3:79318741-79318760 | MS.gene046152:intron | 40.0% | |
| CAAAGCTTACTATAGCGAAG+TGG | + | chr1.3:79320037-79320056 | MS.gene046152:CDS | 40.0% | |
| CACCAACTGCAAATGCAAAT+AGG | - | chr1.3:79316422-79316441 | None:intergenic | 40.0% | |
| CAGCTGCTAAAGAGTTTGAT+GGG | + | chr1.3:79316511-79316530 | MS.gene046152:CDS | 40.0% | |
| CCTGAGAATACACATCATCA+GGG | - | chr1.3:79317783-79317802 | None:intergenic | 40.0% | |
| CTCGTTAAAACAGTGCAGAA+AGG | + | chr1.3:79319455-79319474 | MS.gene046152:intron | 40.0% | |
| CTGAGGATATGATTAGGGAA+GGG | + | chr1.3:79316535-79316554 | MS.gene046152:CDS | 40.0% | |
| GAAAACAGAACGGACATGAA+TGG | - | chr1.3:79316205-79316224 | None:intergenic | 40.0% | |
| GAAGCATGAATGGTTGAAGA+TGG | - | chr1.3:79315898-79315917 | None:intergenic | 40.0% | |
| GAATAACAAACCCTAATGGC+TGG | - | chr1.3:79316243-79316262 | None:intergenic | 40.0% | |
| GACAGTGTCATGACGTTTAA+TGG | + | chr1.3:79318965-79318984 | MS.gene046152:intron | 40.0% | |
| GAGAGATGTGATATATGGTC+TGG | + | chr1.3:79319273-79319292 | MS.gene046152:intron | 40.0% | |
| GATTCACTACTTATGCAGAG+CGG | + | chr1.3:79317617-79317636 | MS.gene046152:CDS | 40.0% | |
| GCAAATAGGTAAGGTGGAAT+TGG | - | chr1.3:79316408-79316427 | None:intergenic | 40.0% | |
| GCAAATGCAAATAGGTAAGG+TGG | - | chr1.3:79316414-79316433 | None:intergenic | 40.0% | |
| GCCACTAAACACGAATTTCT+AGG | - | chr1.3:79319436-79319455 | None:intergenic | 40.0% | |
| GCCTAGAAATTCGTGTTTAG+TGG | + | chr1.3:79319432-79319451 | MS.gene046152:intron | 40.0% | |
| GGAAATCTAAGTAGAGTGTG+AGG | - | chr1.3:79315876-79315895 | None:intergenic | 40.0% | |
| GTCTTATATACACTGGAGTC+GGG | - | chr1.3:79318280-79318299 | None:intergenic | 40.0% | |
| GTTATTAAAGGGGATGCAAC+CGG | + | chr1.3:79316669-79316688 | MS.gene046152:CDS | 40.0% | |
| TAAACTATTACGGGGAGTTG+TGG | - | chr1.3:79316923-79316942 | None:intergenic | 40.0% | |
| TAAAGAGTTTGATGGGACTG+AGG | + | chr1.3:79316518-79316537 | MS.gene046152:CDS | 40.0% | |
| TCAACAACACCTTGAGCAAT+AGG | - | chr1.3:79320197-79320216 | None:intergenic | 40.0% | |
| TCAGCTGCTAAAGAGTTTGA+TGG | + | chr1.3:79316510-79316529 | MS.gene046152:CDS | 40.0% | |
| TCTCAGGTTCCATATGAGAA+AGG | + | chr1.3:79317796-79317815 | MS.gene046152:CDS | 40.0% | |
| TGAGGATATGATTAGGGAAG+GGG | + | chr1.3:79316536-79316555 | MS.gene046152:CDS | 40.0% | |
| TGGCAAATGAGTCGGTAAAT+GGG | + | chr1.3:79318311-79318330 | MS.gene046152:CDS | 40.0% | |
| TGGGACTGAGGATATGATTA+GGG | + | chr1.3:79316530-79316549 | MS.gene046152:CDS | 40.0% | |
| TGGGCTATATAAAGGAGGTT+TGG | - | chr1.3:79319684-79319703 | None:intergenic | 40.0% | |
| TGTATCACTGGCAAATGAGT+CGG | + | chr1.3:79318303-79318322 | MS.gene046152:CDS | 40.0% | |
| TGTGTATGAGTGAGGATCAA+CGG | - | chr1.3:79315821-79315840 | None:intergenic | 40.0% | |
| TGTTACCATCCTATTGCTCA+AGG | + | chr1.3:79320185-79320204 | MS.gene046152:CDS | 40.0% | |
| TGTTGTACCTCATAACGAGT+TGG | - | chr1.3:79318598-79318617 | None:intergenic | 40.0% | |
| TTCCTTAAAGCAAACATCCC+TGG | + | chr1.3:79318187-79318206 | MS.gene046152:CDS | 40.0% | |
| ! | AGTGATGGAGTGGATTTCAA+GGG | - | chr1.3:79315977-79315996 | None:intergenic | 40.0% |
| ! | ATCACAGCCGTCAATTCTTT+TGG | - | chr1.3:79316282-79316301 | None:intergenic | 40.0% |
| ! | GTGAGTTTAGAACCCTTGAT+TGG | - | chr1.3:79316051-79316070 | None:intergenic | 40.0% |
| ! | TAGTTTGTAGCGTGAATCCA+AGG | - | chr1.3:79319955-79319974 | None:intergenic | 40.0% |
| !! | AGTTGGTGAGCTTGATAACA+GGG | + | chr1.3:79316434-79316453 | MS.gene046152:CDS | 40.0% |
| !! | GTGGGAGAGATTTGATTTGT+TGG | + | chr1.3:79316581-79316600 | MS.gene046152:CDS | 40.0% |
| !! | TAAGGTGTCATTTCTCCAAC+GGG | + | chr1.3:79319998-79320017 | MS.gene046152:CDS | 40.0% |
| !! | TATTGCTCAAGGTGTTGTTG+AGG | + | chr1.3:79320196-79320215 | MS.gene046152:CDS | 40.0% |
| !! | TTGCCACCTAGTTTTCCTTA+TGG | + | chr1.3:79316606-79316625 | MS.gene046152:CDS | 40.0% |
| !!! | GGGAACAGTCTTATCGATTT+TGG | - | chr1.3:79319038-79319057 | None:intergenic | 40.0% |
| !!! | TGAACATTTTTGGCTCAACG+AGG | + | chr1.3:79316758-79316777 | MS.gene046152:CDS | 40.0% |
| !!! | TGCCAAGAGACTTTTTTCTG+AGG | + | chr1.3:79320154-79320173 | MS.gene046152:CDS | 40.0% |
| !!! | TGTTTTGGGAATTCGTCCAA+AGG | + | chr1.3:79316351-79316370 | MS.gene046152:CDS | 40.0% |
| AAGTGATGAGAAAGGAGGTG+TGG | - | chr1.3:79316089-79316108 | None:intergenic | 45.0% | |
| AGGGAAGGGGAAAGATTGTT+TGG | + | chr1.3:79316549-79316568 | MS.gene046152:CDS | 45.0% | |
| AGGTGTGGTTAGAAAGAGTG+AGG | - | chr1.3:79316074-79316093 | None:intergenic | 45.0% | |
| ATCCAAACCACAATCTGCCA+TGG | - | chr1.3:79318910-79318929 | None:intergenic | 45.0% | |
| ATCCCCTTTAATAACCGTCG+GGG | - | chr1.3:79316664-79316683 | None:intergenic | 45.0% | |
| ATGGTGGTATGGAGAATCCA+AGG | + | chr1.3:79316625-79316644 | MS.gene046152:CDS | 45.0% | |
| ATGGTTGGAGAGAGGGAAAA+AGG | - | chr1.3:79316024-79316043 | None:intergenic | 45.0% | |
| CAAATGAGTCGGTAAATGGG+AGG | + | chr1.3:79318314-79318333 | MS.gene046152:CDS | 45.0% | |
| CAACACCTTGAGCAATAGGA+TGG | - | chr1.3:79320193-79320212 | None:intergenic | 45.0% | |
| CACCAGAAAGAATCCTAGAC+GGG | - | chr1.3:79319058-79319077 | None:intergenic | 45.0% | |
| CATCCCCTTTAATAACCGTC+GGG | - | chr1.3:79316665-79316684 | None:intergenic | 45.0% | |
| CATTGAAGAGCAGAGGAAGA+AGG | - | chr1.3:79316123-79316142 | None:intergenic | 45.0% | |
| CCACCATAAGGAAAACTAGG+TGG | - | chr1.3:79316612-79316631 | None:intergenic | 45.0% | |
| CCTGACAAGGGAAAACAGAA+CGG | - | chr1.3:79316215-79316234 | None:intergenic | 45.0% | |
| CTGGCAAATGAGTCGGTAAA+TGG | + | chr1.3:79318310-79318329 | MS.gene046152:CDS | 45.0% | |
| CTTCTTCCTCTGCTCTTCAA+TGG | + | chr1.3:79316121-79316140 | MS.gene046152:CDS | 45.0% | |
| GAATTCGTCCAAAGGTAGAG+TGG | + | chr1.3:79316359-79316378 | MS.gene046152:CDS | 45.0% | |
| GATGAAATTGCTGAGTGGCA+AGG | + | chr1.3:79318349-79318368 | MS.gene046152:CDS | 45.0% | |
| GCATCCCCTTTAATAACCGT+CGG | - | chr1.3:79316666-79316685 | None:intergenic | 45.0% | |
| GGATTCTCCATACCACCATA+AGG | - | chr1.3:79316624-79316643 | None:intergenic | 45.0% | |
| GGCCGAATAACAAACCCTAA+TGG | - | chr1.3:79316247-79316266 | None:intergenic | 45.0% | |
| GGGAAAGTCTCCTCATATTC+TGG | + | chr1.3:79317117-79317136 | MS.gene046152:intron | 45.0% | |
| GGTGGTGTAAGTGATGAGAA+AGG | - | chr1.3:79316097-79316116 | None:intergenic | 45.0% | |
| GGTGTAAGTGATGAGAAAGG+AGG | - | chr1.3:79316094-79316113 | None:intergenic | 45.0% | |
| GGTGTGGTTAGAAAGAGTGA+GGG | - | chr1.3:79316073-79316092 | None:intergenic | 45.0% | |
| GTGTATGAGTGAGGATCAAC+GGG | - | chr1.3:79315820-79315839 | None:intergenic | 45.0% | |
| GTTCAATGCGCAACAAGAAC+TGG | - | chr1.3:79317825-79317844 | None:intergenic | 45.0% | |
| GTTGAGTCTGTGTATGAGTG+AGG | - | chr1.3:79315829-79315848 | None:intergenic | 45.0% | |
| TAAGAGCCATTGAAGAGCAG+AGG | - | chr1.3:79316130-79316149 | None:intergenic | 45.0% | |
| TACCTTCTGTCCACAGTACA+AGG | - | chr1.3:79318231-79318250 | None:intergenic | 45.0% | |
| TATTGTGCAGGTCTTAGCCT+TGG | + | chr1.3:79319935-79319954 | MS.gene046152:intron | 45.0% | |
| TCAACATCCTACCTAGGATC+GGG | + | chr1.3:79318492-79318511 | MS.gene046152:intron | 45.0% | |
| TCAGCAATTTCATCCTCCCT+TGG | - | chr1.3:79318343-79318362 | None:intergenic | 45.0% | |
| TCAGCATAAACCCTAGTCCT+GGG | - | chr1.3:79316468-79316487 | None:intergenic | 45.0% | |
| TGACCCCGACGGTTATTAAA+GGG | + | chr1.3:79316658-79316677 | MS.gene046152:CDS | 45.0% | |
| TGAGGATGTAGAGAGGTTCA+AGG | + | chr1.3:79317711-79317730 | MS.gene046152:CDS | 45.0% | |
| TGCCAGGGATGTTTGCTTTA+AGG | - | chr1.3:79318192-79318211 | None:intergenic | 45.0% | |
| TGGTATGGAGAATCCAAGGA+TGG | + | chr1.3:79316629-79316648 | MS.gene046152:CDS | 45.0% | |
| TGGTTGGAGAGAGGGAAAAA+GGG | - | chr1.3:79316023-79316042 | None:intergenic | 45.0% | |
| TGGTTGGAGGGGTTTAAATG+AGG | + | chr1.3:79317693-79317712 | MS.gene046152:CDS | 45.0% | |
| TTCACCAGTGCAGTGTAAAG+TGG | - | chr1.3:79320104-79320123 | None:intergenic | 45.0% | |
| TTCAGCATAAACCCTAGTCC+TGG | - | chr1.3:79316469-79316488 | None:intergenic | 45.0% | |
| TTGAAGAGCAGAGGAAGAAG+GGG | - | chr1.3:79316121-79316140 | None:intergenic | 45.0% | |
| TTGACCCCGACGGTTATTAA+AGG | + | chr1.3:79316657-79316676 | MS.gene046152:CDS | 45.0% | |
| ! | AGTGGTGGAAGAGTTTGAGA+TGG | + | chr1.3:79316377-79316396 | MS.gene046152:CDS | 45.0% |
| ! | CAACTATGGCGGAAACAGAA+AGG | - | chr1.3:79318458-79318477 | None:intergenic | 45.0% |
| ! | CAGCATGGGCTATATAAAGG+AGG | - | chr1.3:79319689-79319708 | None:intergenic | 45.0% |
| ! | CAGTGATGGAGTGGATTTCA+AGG | - | chr1.3:79315978-79315997 | None:intergenic | 45.0% |
| ! | CCCTGATGATGTGTATTCTC+AGG | + | chr1.3:79317780-79317799 | MS.gene046152:CDS | 45.0% |
| ! | CTCATGAACTTGCTCATAGC+TGG | + | chr1.3:79316706-79316725 | MS.gene046152:CDS | 45.0% |
| ! | GAAGAGTGCAGAAGCATGAA+TGG | - | chr1.3:79315908-79315927 | None:intergenic | 45.0% |
| ! | GAGCAGCATGGGCTATATAA+AGG | - | chr1.3:79319692-79319711 | None:intergenic | 45.0% |
| ! | TATAAAGCTCGGTGGAAGGT+TGG | + | chr1.3:79319889-79319908 | MS.gene046152:intron | 45.0% |
| ! | TTCCCGTCTAGGATTCTTTC+TGG | + | chr1.3:79319053-79319072 | MS.gene046152:intron | 45.0% |
| !! | CAGTTGGTGAGCTTGATAAC+AGG | + | chr1.3:79316433-79316452 | MS.gene046152:CDS | 45.0% |
| !! | CCACCTAGTTTTCCTTATGG+TGG | + | chr1.3:79316609-79316628 | MS.gene046152:CDS | 45.0% |
| !! | GGATTGGAGTGGATTGAGAA+GGG | - | chr1.3:79316002-79316021 | None:intergenic | 45.0% |
| !! | TTAGGGTTTGTTATTCGGCC+CGG | + | chr1.3:79316247-79316266 | MS.gene046152:CDS | 45.0% |
| !!! | GGTGTTGTTGAGGCCATTTT+TGG | + | chr1.3:79320206-79320225 | MS.gene046152:CDS | 45.0% |
| AATTGCTGAGTGGCAAGGTC+AGG | + | chr1.3:79318354-79318373 | MS.gene046152:CDS | 50.0% | |
| ACTCTCCAAAACCCTCACTC+TGG | + | chr1.3:79315928-79315947 | MS.gene046152:CDS | 50.0% | |
| AGAACCCTTGATTGGGTCGA+TGG | - | chr1.3:79316043-79316062 | None:intergenic | 50.0% | |
| AGCCATGGCAGATTGTGGTT+TGG | + | chr1.3:79318905-79318924 | MS.gene046152:intron | 50.0% | |
| AGGAAGAAAGGACCAGAGTG+AGG | - | chr1.3:79315943-79315962 | None:intergenic | 50.0% | |
| AGGATTGTGGAGGCTGTACA+AGG | + | chr1.3:79317640-79317659 | MS.gene046152:CDS | 50.0% | |
| AGGGAAATGTGAGTGGTTGG+TGG | - | chr1.3:79315856-79315875 | None:intergenic | 50.0% | |
| ATAGCAGCCATGGCAGATTG+TGG | + | chr1.3:79318900-79318919 | MS.gene046152:intron | 50.0% | |
| ATCCGCATGAAATAGCCCGT+TGG | - | chr1.3:79320016-79320035 | None:intergenic | 50.0% | |
| CAACATCCTACCTAGGATCG+GGG | + | chr1.3:79318493-79318512 | MS.gene046152:intron | 50.0% | |
| CATCAGGGTCAATTCCTTCC+TGG | - | chr1.3:79317768-79317787 | None:intergenic | 50.0% | |
| CCAACCATCGACCCAATCAA+GGG | + | chr1.3:79316036-79316055 | MS.gene046152:CDS | 50.0% | |
| CCAGTGCAGTGTAAAGTGGA+CGG | - | chr1.3:79320100-79320119 | None:intergenic | 50.0% | |
| CGATAAGACTGTTCCCGTCT+AGG | + | chr1.3:79319042-79319061 | MS.gene046152:intron | 50.0% | |
| CTACGGTCCAACTCGTTATG+AGG | + | chr1.3:79318588-79318607 | MS.gene046152:intron | 50.0% | |
| CTCTTCCACCACTCTACCTT+TGG | - | chr1.3:79316370-79316389 | None:intergenic | 50.0% | |
| CTTGTTGCGCATTGAACGTG+AGG | + | chr1.3:79317828-79317847 | MS.gene046152:CDS | 50.0% | |
| GACCCCGACGGTTATTAAAG+GGG | + | chr1.3:79316659-79316678 | MS.gene046152:CDS | 50.0% | |
| GACCTTGTACTGTGGACAGA+AGG | + | chr1.3:79318226-79318245 | MS.gene046152:CDS | 50.0% | |
| GAGGGAAAAAGGGATTGGAG+TGG | - | chr1.3:79316013-79316032 | None:intergenic | 50.0% | |
| GAGTGTGAGGGAAATGTGAG+TGG | - | chr1.3:79315863-79315882 | None:intergenic | 50.0% | |
| GCAGCTGAATCCAACAGTTG+AGG | - | chr1.3:79316498-79316517 | None:intergenic | 50.0% | |
| GGAAGAAAGGACCAGAGTGA+GGG | - | chr1.3:79315942-79315961 | None:intergenic | 50.0% | |
| GGAGAGAGGGAAAAAGGGAT+TGG | - | chr1.3:79316018-79316037 | None:intergenic | 50.0% | |
| GGATTGAGAAGGGTCAGTGA+TGG | - | chr1.3:79315992-79316011 | None:intergenic | 50.0% | |
| GGGAAATGTGAGTGGTTGGT+GGG | - | chr1.3:79315855-79315874 | None:intergenic | 50.0% | |
| GGGAGGATGAAATTGCTGAG+TGG | + | chr1.3:79318344-79318363 | MS.gene046152:CDS | 50.0% | |
| GGGGTCAAAAACACCATCCT+TGG | - | chr1.3:79316645-79316664 | None:intergenic | 50.0% | |
| GGTAAATGGGAGGATGCCAA+GGG | + | chr1.3:79318324-79318343 | MS.gene046152:CDS | 50.0% | |
| GTGAGGGAAATGTGAGTGGT+TGG | - | chr1.3:79315859-79315878 | None:intergenic | 50.0% | |
| TCACTACTTATGCAGAGCGG+AGG | + | chr1.3:79317620-79317639 | MS.gene046152:CDS | 50.0% | |
| TCAGGACACACCAGCCATTA+GGG | + | chr1.3:79316230-79316249 | MS.gene046152:CDS | 50.0% | |
| TCCAACCATCGACCCAATCA+AGG | + | chr1.3:79316035-79316054 | MS.gene046152:CDS | 50.0% | |
| TGTGATGGCTGCAAAACACG+TGG | + | chr1.3:79316296-79316315 | MS.gene046152:CDS | 50.0% | |
| TTATGCAGAGCGGAGGATTG+TGG | + | chr1.3:79317627-79317646 | MS.gene046152:CDS | 50.0% | |
| TTCGTCCAAAGGTAGAGTGG+TGG | + | chr1.3:79316362-79316381 | MS.gene046152:CDS | 50.0% | |
| ! | AAGGACCAGAGTGAGGGTTT+TGG | - | chr1.3:79315936-79315955 | None:intergenic | 50.0% |
| ! | ACTGCACTGGTGAAAGACAG+TGG | + | chr1.3:79320110-79320129 | MS.gene046152:CDS | 50.0% |
| ! | AGCTTGATAACAGGGAGGTG+GGG | + | chr1.3:79316442-79316461 | MS.gene046152:CDS | 50.0% |
| ! | CCGTTCTGTTTTCCCTTGTC+AGG | + | chr1.3:79316212-79316231 | MS.gene046152:CDS | 50.0% |
| ! | CTCATAACGAGTTGGACCGT+AGG | - | chr1.3:79318590-79318609 | None:intergenic | 50.0% |
| ! | GAACTTGCTCATAGCTGGAC+TGG | + | chr1.3:79316711-79316730 | MS.gene046152:CDS | 50.0% |
| ! | GAGCTTGATAACAGGGAGGT+GGG | + | chr1.3:79316441-79316460 | MS.gene046152:CDS | 50.0% |
| ! | GTACTGTGGACAGAAGGTAC+TGG | + | chr1.3:79318232-79318251 | MS.gene046152:CDS | 50.0% |
| ! | TGAGCTTGATAACAGGGAGG+TGG | + | chr1.3:79316440-79316459 | MS.gene046152:CDS | 50.0% |
| ! | TGGTGAGCTTGATAACAGGG+AGG | + | chr1.3:79316437-79316456 | MS.gene046152:CDS | 50.0% |
| ! | TTTCAAGGGAACGAGTGTCG+AGG | - | chr1.3:79315963-79315982 | None:intergenic | 50.0% |
| !! | CGGGCTCAAAAGCATCAGAT+GGG | - | chr1.3:79318261-79318280 | None:intergenic | 50.0% |
| !! | CTCCAACGGGCTATTTCATG+CGG | + | chr1.3:79320011-79320030 | MS.gene046152:CDS | 50.0% |
| !! | GAACGAGTGTCGAGGAAGAA+AGG | - | chr1.3:79315955-79315974 | None:intergenic | 50.0% |
| !! | GATGGTGTTTTTGACCCCGA+CGG | + | chr1.3:79316647-79316666 | MS.gene046152:CDS | 50.0% |
| !! | GGGATTGGAGTGGATTGAGA+AGG | - | chr1.3:79316003-79316022 | None:intergenic | 50.0% |
| !! | TCGGGCTCAAAAGCATCAGA+TGG | - | chr1.3:79318262-79318281 | None:intergenic | 50.0% |
| !!! | CGATTTTGGATAGTGGGCCA+TGG | - | chr1.3:79319024-79319043 | None:intergenic | 50.0% |
| AAATGGGAGGATGCCAAGGG+AGG | + | chr1.3:79318327-79318346 | MS.gene046152:CDS | 55.0% | |
| AAGAGCAGAGGAAGAAGGGG+AGG | - | chr1.3:79316118-79316137 | None:intergenic | 55.0% | |
| ATCCTACCTAGGATCGGGGA+GGG | + | chr1.3:79318497-79318516 | MS.gene046152:intron | 55.0% | |
| ATGAGCCACAACCTGTGCAC+CGG | - | chr1.3:79316691-79316710 | None:intergenic | 55.0% | |
| ATGGCTGGTGTGTCCTGACA+AGG | - | chr1.3:79316228-79316247 | None:intergenic | 55.0% | |
| CCCTTGATTGGGTCGATGGT+TGG | - | chr1.3:79316039-79316058 | None:intergenic | 55.0% | |
| CCGTCCACTTTACACTGCAC+TGG | + | chr1.3:79320097-79320116 | MS.gene046152:CDS | 55.0% | |
| CGGTAAATGGGAGGATGCCA+AGG | + | chr1.3:79318323-79318342 | MS.gene046152:CDS | 55.0% | |
| GTCAGGACACACCAGCCATT+AGG | + | chr1.3:79316229-79316248 | MS.gene046152:CDS | 55.0% | |
| TCAGGAGTGGGAGCTCTACT+TGG | + | chr1.3:79318372-79318391 | MS.gene046152:CDS | 55.0% | |
| TGAAGCTGCGCCTCAACTGT+TGG | + | chr1.3:79316485-79316504 | MS.gene046152:CDS | 55.0% | |
| TGAGTGGCAAGGTCAGGAGT+GGG | + | chr1.3:79318360-79318379 | MS.gene046152:CDS | 55.0% | |
| TGGCTGGTGTGTCCTGACAA+GGG | - | chr1.3:79316227-79316246 | None:intergenic | 55.0% | |
| TGGGTCGATGGTTGGAGAGA+GGG | - | chr1.3:79316031-79316050 | None:intergenic | 55.0% | |
| TTGGGTCGATGGTTGGAGAG+AGG | - | chr1.3:79316032-79316051 | None:intergenic | 55.0% | |
| ! | AAAGCTCGGTGGAAGGTTGG+CGG | + | chr1.3:79319892-79319911 | MS.gene046152:intron | 55.0% |
| ! | GAGAAGGGTCAGTGATGGAG+TGG | - | chr1.3:79315987-79316006 | None:intergenic | 55.0% |
| AGCAGAGGAAGAAGGGGAGG+TGG | - | chr1.3:79316115-79316134 | None:intergenic | 60.0% | |
| CATCCTACCTAGGATCGGGG+AGG | + | chr1.3:79318496-79318515 | MS.gene046152:intron | 60.0% | |
| CTGAGTGGCAAGGTCAGGAG+TGG | + | chr1.3:79318359-79318378 | MS.gene046152:CDS | 60.0% | |
| TCCTACCTAGGATCGGGGAG+GGG | + | chr1.3:79318498-79318517 | MS.gene046152:intron | 60.0% | |
| TGCAACCGGTGCACAGGTTG+TGG | + | chr1.3:79316683-79316702 | MS.gene046152:CDS | 60.0% | |
| TGCAGAGCGGAGGATTGTGG+AGG | + | chr1.3:79317630-79317649 | MS.gene046152:CDS | 60.0% | |
| AGGGGATGCAACCGGTGCAC+AGG | + | chr1.3:79316677-79316696 | MS.gene046152:CDS | 65.0% | |
| ATAACAGGGAGGTGGGGCCC+AGG | + | chr1.3:79316448-79316467 | MS.gene046152:CDS | 65.0% | |
| CCTACCTAGGATCGGGGAGG+GGG | + | chr1.3:79318499-79318518 | MS.gene046152:intron | 65.0% | |
| CGTGGTGCGTCGCGAATCGT+TGG | + | chr1.3:79316314-79316333 | MS.gene046152:CDS | 65.0% | |
| CCCCCTCCCCGATCCTAGGT+AGG | - | chr1.3:79318502-79318521 | None:intergenic | 70.0% | |
| GCAACCCCCTCCCCGATCCT+AGG | - | chr1.3:79318506-79318525 | None:intergenic | 70.0% | |
| GGAGGTGGGGCCCAGGACTA+GGG | + | chr1.3:79316455-79316474 | MS.gene046152:CDS | 70.0% | |
| GGGAGGTGGGGCCCAGGACT+AGG | + | chr1.3:79316454-79316473 | MS.gene046152:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 79315811 | 79320241 | 79315811 | ID=MS.gene046152 |
| chr1.3 | mRNA | 79315811 | 79320241 | 79315811 | ID=MS.gene046152.t1;Parent=MS.gene046152 |
| chr1.3 | exon | 79315811 | 79316779 | 79315811 | ID=MS.gene046152.t1.exon1;Parent=MS.gene046152.t1 |
| chr1.3 | CDS | 79315811 | 79316779 | 79315811 | ID=cds.MS.gene046152.t1;Parent=MS.gene046152.t1 |
| chr1.3 | exon | 79317616 | 79317849 | 79317616 | ID=MS.gene046152.t1.exon2;Parent=MS.gene046152.t1 |
| chr1.3 | CDS | 79317616 | 79317849 | 79317616 | ID=cds.MS.gene046152.t1;Parent=MS.gene046152.t1 |
| chr1.3 | exon | 79318100 | 79318426 | 79318100 | ID=MS.gene046152.t1.exon3;Parent=MS.gene046152.t1 |
| chr1.3 | CDS | 79318100 | 79318426 | 79318100 | ID=cds.MS.gene046152.t1;Parent=MS.gene046152.t1 |
| chr1.3 | exon | 79319945 | 79320241 | 79319945 | ID=MS.gene046152.t1.exon4;Parent=MS.gene046152.t1 |
| chr1.3 | CDS | 79319945 | 79320241 | 79319945 | ID=cds.MS.gene046152.t1;Parent=MS.gene046152.t1 |
| Gene Sequence |
| Protein sequence |
