Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27779.t1 | Q40316.1 | 83.1 | 326 | 2 | 1 | 1 | 273 | 1 | 326 | 1.30E-144 | 522.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27779.t1 | Q40316 | 83.1 | 326 | 2 | 1 | 1 | 273 | 1 | 326 | 3.2e-147 | 522.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27779.t1 | A2Q3W4 | 83.1 | 326 | 2 | 1 | 1 | 273 | 1 | 326 | 1.6e-144 | 521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene27779 | 0.804552 | 2.05E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene27779 | -0.838976 | 2.09E-57 | -1.69E-46 |
| MS.gene049259 | MS.gene27779 | 0.827474 | 1.53E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene27779 | -0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene049483 | MS.gene27779 | 0.803121 | 4.06E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene27779 | 0.830828 | 2.36E-55 | -1.69E-46 |
| MS.gene049634 | MS.gene27779 | 0.841608 | 4.29E-58 | -1.69E-46 |
| MS.gene05015 | MS.gene27779 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene27779 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene27779 | -0.854651 | 1.07E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene27779 | -0.826477 | 2.66E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene27779 | 0.823121 | 1.64E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene27779 | 0.881513 | 2.25E-70 | -1.69E-46 |
| MS.gene050496 | MS.gene27779 | -0.819047 | 1.43E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene27779 | -0.838314 | 3.09E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene27779 | -0.841543 | 4.46E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene27779 | -0.815332 | 9.76E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene27779 | -0.85156 | 8.20E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene27779 | -0.852423 | 4.66E-61 | -1.69E-46 |
| MS.gene050883 | MS.gene27779 | 0.864125 | 1.52E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene27779 | -0.81574 | 7.92E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene27779 | 0.835107 | 2.03E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene27779 | 0.832247 | 1.05E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene27779 | 0.883216 | 5.41E-71 | -1.69E-46 |
| MS.gene051138 | MS.gene27779 | 0.858291 | 9.11E-63 | -1.69E-46 |
| MS.gene051268 | MS.gene27779 | -0.821566 | 3.77E-53 | -1.69E-46 |
| MS.gene051410 | MS.gene27779 | 0.825481 | 4.58E-54 | -1.69E-46 |
| MS.gene05141 | MS.gene27779 | 0.836772 | 7.69E-57 | -1.69E-46 |
| MS.gene051632 | MS.gene27779 | 0.8216 | 3.70E-53 | -1.69E-46 |
| MS.gene051863 | MS.gene27779 | 0.835618 | 1.51E-56 | -1.69E-46 |
| MS.gene051946 | MS.gene27779 | 0.853031 | 3.13E-61 | -1.69E-46 |
| MS.gene052482 | MS.gene27779 | -0.805244 | 1.47E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene27779 | -0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene052566 | MS.gene27779 | 0.801578 | 8.43E-49 | -1.69E-46 |
| MS.gene052802 | MS.gene27779 | 0.83593 | 1.26E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene27779 | -0.803006 | 4.28E-49 | -1.69E-46 |
| MS.gene053069 | MS.gene27779 | 0.826183 | 3.12E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene27779 | -0.810139 | 1.34E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene27779 | 0.870523 | 1.37E-66 | -1.69E-46 |
| MS.gene053488 | MS.gene27779 | 0.840167 | 1.02E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene27779 | 0.862665 | 4.31E-64 | -1.69E-46 |
| MS.gene053826 | MS.gene27779 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene054054 | MS.gene27779 | 0.836435 | 9.37E-57 | -1.69E-46 |
| MS.gene054056 | MS.gene27779 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene27779 | -0.821448 | 4.02E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene27779 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene27779 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene27779 | 0.831368 | 1.74E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene27779 | -0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene27779 | 0.882645 | 8.75E-71 | -1.69E-46 |
| MS.gene055139 | MS.gene27779 | 0.830686 | 2.55E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene27779 | 0.86067 | 1.76E-63 | -1.69E-46 |
| MS.gene055202 | MS.gene27779 | 0.861777 | 8.08E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene27779 | -0.827858 | 1.24E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene27779 | -0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene27779 | 0.823785 | 1.15E-53 | -1.69E-46 |
| MS.gene056224 | MS.gene27779 | 0.82825 | 9.98E-55 | -1.69E-46 |
| MS.gene056298 | MS.gene27779 | 0.801227 | 9.95E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene27779 | 0.84525 | 4.56E-59 | -1.69E-46 |
| MS.gene056311 | MS.gene27779 | 0.854048 | 1.60E-61 | -1.69E-46 |
| MS.gene056313 | MS.gene27779 | 0.8721 | 4.12E-67 | -1.69E-46 |
| MS.gene056504 | MS.gene27779 | -0.838381 | 2.97E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene27779 | -0.821392 | 4.14E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene27779 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene27779 | 0.851345 | 9.43E-61 | -1.69E-46 |
| MS.gene057473 | MS.gene27779 | 0.808262 | 3.38E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene27779 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene27779 | 0.830807 | 2.39E-55 | -1.69E-46 |
| MS.gene058041 | MS.gene27779 | -0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene27779 | 0.810301 | 1.23E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene27779 | 0.848509 | 5.86E-60 | -1.69E-46 |
| MS.gene058099 | MS.gene27779 | 0.872008 | 4.42E-67 | -1.69E-46 |
| MS.gene058108 | MS.gene27779 | 0.893544 | 5.69E-75 | -1.69E-46 |
| MS.gene058109 | MS.gene27779 | 0.886374 | 3.62E-72 | -1.69E-46 |
| MS.gene058111 | MS.gene27779 | 0.876407 | 1.43E-68 | -1.69E-46 |
| MS.gene058117 | MS.gene27779 | 0.832312 | 1.02E-55 | -1.69E-46 |
| MS.gene058157 | MS.gene27779 | -0.824376 | 8.35E-54 | -1.69E-46 |
| MS.gene058170 | MS.gene27779 | 0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene27779 | 0.94483 | 9.47E-104 | -1.69E-46 |
| MS.gene058173 | MS.gene27779 | 0.945735 | 1.75E-104 | -1.69E-46 |
| MS.gene058174 | MS.gene27779 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene27779 | 0.950538 | 1.34E-108 | -1.69E-46 |
| MS.gene058176 | MS.gene27779 | 0.816626 | 5.02E-52 | -1.69E-46 |
| MS.gene058179 | MS.gene27779 | 0.844159 | 8.99E-59 | -1.69E-46 |
| MS.gene058180 | MS.gene27779 | 0.830994 | 2.15E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene27779 | 0.808239 | 3.42E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene27779 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene27779 | -0.819047 | 1.43E-52 | -1.69E-46 |
| MS.gene058493 | MS.gene27779 | 0.824032 | 1.01E-53 | -1.69E-46 |
| MS.gene058494 | MS.gene27779 | 0.824645 | 7.22E-54 | -1.69E-46 |
| MS.gene058630 | MS.gene27779 | 0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene27779 | 0.818193 | 2.23E-52 | -1.69E-46 |
| MS.gene05884 | MS.gene27779 | 0.802958 | 4.38E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene27779 | -0.822004 | 2.99E-53 | -1.69E-46 |
| MS.gene059037 | MS.gene27779 | 0.863854 | 1.85E-64 | -1.69E-46 |
| MS.gene059038 | MS.gene27779 | 0.837175 | 6.07E-57 | -1.69E-46 |
| MS.gene059044 | MS.gene27779 | 0.829119 | 6.15E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene27779 | 0.89197 | 2.44E-74 | -1.69E-46 |
| MS.gene059223 | MS.gene27779 | 0.841547 | 4.45E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene27779 | -0.819114 | 1.38E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene27779 | 0.833993 | 3.88E-56 | -1.69E-46 |
| MS.gene059691 | MS.gene27779 | 0.801091 | 1.06E-48 | -1.69E-46 |
| MS.gene059694 | MS.gene27779 | 0.831588 | 1.53E-55 | -1.69E-46 |
| MS.gene059697 | MS.gene27779 | 0.830056 | 3.64E-55 | -1.69E-46 |
| MS.gene059703 | MS.gene27779 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene27779 | -0.851895 | 6.59E-61 | -1.69E-46 |
| MS.gene059943 | MS.gene27779 | 0.828695 | 7.79E-55 | -1.69E-46 |
| MS.gene060187 | MS.gene27779 | 0.817269 | 3.60E-52 | -1.69E-46 |
| MS.gene060205 | MS.gene27779 | 0.802838 | 4.64E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene27779 | 0.815181 | 1.05E-51 | -1.69E-46 |
| MS.gene060778 | MS.gene27779 | -0.831269 | 1.84E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene27779 | -0.820084 | 8.27E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27779 | MS.gene071398 | PPI |
| MS.gene40154 | MS.gene27779 | PPI |
| MS.gene028567 | MS.gene27779 | PPI |
| MS.gene071401 | MS.gene27779 | PPI |
| MS.gene006771 | MS.gene27779 | PPI |
| MS.gene56554 | MS.gene27779 | PPI |
| MS.gene40148 | MS.gene27779 | PPI |
| MS.gene96808 | MS.gene27779 | PPI |
| MS.gene031525 | MS.gene27779 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27779.t1 | MTR_7g074710 | 83.129 | 326 | 2 | 1 | 1 | 273 | 1 | 326 | 0.0 | 528 |
| MS.gene27779.t1 | MTR_7g074880 | 60.123 | 326 | 77 | 1 | 1 | 273 | 1 | 326 | 8.95e-139 | 394 |
| MS.gene27779.t1 | MTR_7g074850 | 57.447 | 329 | 84 | 2 | 1 | 273 | 1 | 329 | 1.22e-134 | 384 |
| MS.gene27779.t1 | MTR_7g074730 | 57.317 | 328 | 85 | 2 | 1 | 273 | 1 | 328 | 3.86e-131 | 374 |
| MS.gene27779.t1 | MTR_7g074820 | 55.623 | 329 | 90 | 3 | 1 | 273 | 1 | 329 | 6.31e-129 | 369 |
| MS.gene27779.t1 | MTR_7g074870 | 55.245 | 286 | 75 | 1 | 41 | 273 | 3 | 288 | 3.35e-106 | 310 |
| MS.gene27779.t1 | MTR_4g023730 | 43.769 | 329 | 129 | 3 | 1 | 273 | 1 | 329 | 1.80e-86 | 261 |
| MS.gene27779.t1 | MTR_1g022440 | 37.931 | 319 | 144 | 3 | 8 | 273 | 8 | 325 | 7.91e-75 | 232 |
| MS.gene27779.t1 | MTR_1g022445 | 37.618 | 319 | 145 | 3 | 8 | 273 | 8 | 325 | 4.44e-72 | 224 |
| MS.gene27779.t1 | MTR_4g092080 | 43.396 | 212 | 116 | 3 | 5 | 214 | 11 | 220 | 1.57e-52 | 174 |
| MS.gene27779.t1 | MTR_8g062440 | 42.791 | 215 | 115 | 4 | 4 | 214 | 3 | 213 | 6.67e-51 | 170 |
| MS.gene27779.t1 | MTR_8g062440 | 42.791 | 215 | 115 | 4 | 4 | 214 | 3 | 213 | 1.08e-50 | 169 |
| MS.gene27779.t1 | MTR_8g062440 | 41.860 | 215 | 118 | 3 | 4 | 214 | 3 | 214 | 1.85e-49 | 166 |
| MS.gene27779.t1 | MTR_8g062110 | 41.743 | 218 | 119 | 4 | 1 | 214 | 1 | 214 | 9.85e-49 | 162 |
| MS.gene27779.t1 | MTR_8g062110 | 41.743 | 218 | 119 | 4 | 1 | 214 | 1 | 214 | 1.00e-48 | 163 |
| MS.gene27779.t1 | MTR_8g062110 | 41.743 | 218 | 119 | 4 | 1 | 214 | 1 | 214 | 2.74e-48 | 163 |
| MS.gene27779.t1 | MTR_8g062110 | 41.743 | 218 | 119 | 4 | 1 | 214 | 10 | 223 | 2.88e-48 | 163 |
| MS.gene27779.t1 | MTR_4g081440 | 36.522 | 230 | 132 | 4 | 6 | 225 | 22 | 247 | 5.56e-47 | 160 |
| MS.gene27779.t1 | MTR_4g081440 | 36.522 | 230 | 132 | 4 | 6 | 225 | 18 | 243 | 6.25e-47 | 160 |
| MS.gene27779.t1 | MTR_3g005210 | 38.571 | 210 | 122 | 3 | 8 | 214 | 6 | 211 | 1.62e-45 | 155 |
| MS.gene27779.t1 | MTR_4g077130 | 40.976 | 205 | 113 | 4 | 2 | 203 | 4 | 203 | 6.61e-45 | 154 |
| MS.gene27779.t1 | MTR_2g101330 | 33.333 | 321 | 155 | 7 | 7 | 273 | 4 | 319 | 1.13e-44 | 154 |
| MS.gene27779.t1 | MTR_3g005170 | 39.048 | 210 | 121 | 4 | 8 | 214 | 10 | 215 | 1.19e-43 | 150 |
| MS.gene27779.t1 | MTR_3g005170 | 39.048 | 210 | 121 | 4 | 8 | 214 | 10 | 215 | 2.24e-43 | 150 |
| MS.gene27779.t1 | MTR_4g077100 | 38.073 | 218 | 127 | 4 | 1 | 214 | 3 | 216 | 9.11e-42 | 145 |
| MS.gene27779.t1 | MTR_4g077100 | 38.073 | 218 | 127 | 4 | 1 | 214 | 3 | 216 | 2.81e-41 | 145 |
| MS.gene27779.t1 | MTR_2g013230 | 30.973 | 339 | 165 | 9 | 1 | 271 | 1 | 338 | 4.11e-41 | 145 |
| MS.gene27779.t1 | MTR_2g013250 | 29.080 | 337 | 170 | 8 | 3 | 271 | 2 | 337 | 9.54e-37 | 133 |
| MS.gene27779.t1 | MTR_5g056600 | 29.375 | 320 | 166 | 8 | 9 | 273 | 5 | 319 | 1.25e-36 | 132 |
| MS.gene27779.t1 | MTR_3g031650 | 29.595 | 321 | 165 | 9 | 8 | 273 | 5 | 319 | 1.79e-35 | 129 |
| MS.gene27779.t1 | MTR_3g031650 | 36.946 | 203 | 120 | 5 | 8 | 207 | 5 | 202 | 2.30e-35 | 128 |
| MS.gene27779.t1 | MTR_2g013260 | 37.368 | 190 | 111 | 5 | 1 | 183 | 1 | 189 | 2.24e-33 | 123 |
| MS.gene27779.t1 | MTR_2g013260 | 37.368 | 190 | 111 | 5 | 1 | 183 | 1 | 189 | 5.96e-33 | 123 |
| MS.gene27779.t1 | MTR_5g072620 | 37.438 | 203 | 119 | 5 | 8 | 207 | 5 | 202 | 3.63e-32 | 120 |
| MS.gene27779.t1 | MTR_4g009040 | 37.306 | 193 | 112 | 6 | 7 | 196 | 12 | 198 | 5.13e-32 | 120 |
| MS.gene27779.t1 | MTR_4g009040 | 36.041 | 197 | 113 | 6 | 7 | 196 | 12 | 202 | 1.48e-30 | 117 |
| MS.gene27779.t1 | MTR_7g117190 | 28.824 | 340 | 172 | 11 | 3 | 273 | 2 | 340 | 4.18e-29 | 113 |
| MS.gene27779.t1 | MTR_4g009690 | 37.383 | 214 | 120 | 7 | 7 | 217 | 12 | 214 | 5.24e-29 | 112 |
| MS.gene27779.t1 | MTR_4g009690 | 37.383 | 214 | 120 | 7 | 7 | 217 | 12 | 214 | 6.27e-29 | 112 |
| MS.gene27779.t1 | MTR_2g104960 | 30.769 | 325 | 151 | 18 | 8 | 273 | 20 | 329 | 6.40e-29 | 112 |
| MS.gene27779.t1 | MTR_4g006940 | 29.305 | 331 | 156 | 15 | 4 | 273 | 13 | 326 | 8.31e-29 | 112 |
| MS.gene27779.t1 | MTR_4g006940 | 37.017 | 181 | 102 | 8 | 4 | 182 | 13 | 183 | 2.10e-28 | 110 |
| MS.gene27779.t1 | MTR_4g006940 | 37.017 | 181 | 102 | 8 | 4 | 182 | 13 | 183 | 2.10e-28 | 110 |
| MS.gene27779.t1 | MTR_7g117190 | 34.419 | 215 | 130 | 6 | 3 | 207 | 2 | 215 | 5.24e-28 | 109 |
| MS.gene27779.t1 | MTR_3g005170 | 32.857 | 210 | 103 | 5 | 8 | 214 | 10 | 184 | 1.84e-27 | 107 |
| MS.gene27779.t1 | MTR_2g028620 | 36.126 | 191 | 104 | 8 | 8 | 189 | 10 | 191 | 6.51e-25 | 101 |
| MS.gene27779.t1 | MTR_2g028620 | 36.126 | 191 | 104 | 8 | 8 | 189 | 10 | 191 | 6.80e-25 | 101 |
| MS.gene27779.t1 | MTR_0164s0070 | 40.625 | 128 | 74 | 2 | 7 | 133 | 4 | 130 | 1.35e-24 | 98.2 |
| MS.gene27779.t1 | MTR_5g029990 | 28.713 | 202 | 128 | 5 | 8 | 204 | 12 | 202 | 7.24e-21 | 90.1 |
| MS.gene27779.t1 | MTR_6g406250 | 29.384 | 211 | 134 | 5 | 4 | 206 | 51 | 254 | 3.45e-19 | 84.7 |
| MS.gene27779.t1 | MTR_6g406250 | 28.879 | 232 | 150 | 5 | 4 | 227 | 51 | 275 | 3.92e-19 | 86.3 |
| MS.gene27779.t1 | MTR_7g074865 | 82.500 | 40 | 7 | 0 | 1 | 40 | 1 | 40 | 2.16e-18 | 77.8 |
| MS.gene27779.t1 | MTR_8g062110 | 38.053 | 113 | 64 | 2 | 105 | 214 | 19 | 128 | 1.94e-14 | 70.5 |
| MS.gene27779.t1 | MTR_8g062110 | 38.053 | 113 | 64 | 2 | 105 | 214 | 19 | 128 | 3.91e-14 | 70.5 |
| MS.gene27779.t1 | MTR_3g101500 | 28.421 | 190 | 116 | 6 | 7 | 196 | 3 | 172 | 1.23e-12 | 65.9 |
| MS.gene27779.t1 | MTR_3g101500 | 28.421 | 190 | 116 | 6 | 7 | 196 | 3 | 172 | 3.23e-12 | 66.2 |
| MS.gene27779.t1 | MTR_3g101500 | 28.421 | 190 | 116 | 6 | 7 | 196 | 3 | 172 | 3.83e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27779.t1 | AT2G45400 | 41.159 | 328 | 132 | 6 | 6 | 273 | 38 | 364 | 1.31e-78 | 242 |
| MS.gene27779.t1 | AT5G42800 | 38.855 | 332 | 137 | 6 | 1 | 273 | 1 | 325 | 2.53e-72 | 227 |
| MS.gene27779.t1 | AT2G45400 | 48.305 | 236 | 110 | 4 | 6 | 229 | 38 | 273 | 5.66e-71 | 221 |
| MS.gene27779.t1 | AT2G45400 | 50.926 | 216 | 100 | 3 | 6 | 215 | 38 | 253 | 6.64e-70 | 216 |
| MS.gene27779.t1 | AT2G45400 | 39.310 | 290 | 116 | 5 | 43 | 273 | 19 | 307 | 3.06e-62 | 198 |
| MS.gene27779.t1 | AT4G35420 | 35.583 | 326 | 152 | 7 | 1 | 273 | 1 | 321 | 2.10e-55 | 181 |
| MS.gene27779.t1 | AT1G61720 | 45.641 | 195 | 102 | 3 | 4 | 196 | 9 | 201 | 4.93e-54 | 178 |
| MS.gene27779.t1 | AT1G09490 | 38.148 | 270 | 151 | 7 | 1 | 261 | 1 | 263 | 1.17e-47 | 161 |
| MS.gene27779.t1 | AT1G09480 | 38.148 | 270 | 151 | 7 | 1 | 261 | 1 | 263 | 2.21e-47 | 160 |
| MS.gene27779.t1 | AT1G66800 | 38.843 | 242 | 136 | 7 | 4 | 238 | 3 | 239 | 2.77e-47 | 160 |
| MS.gene27779.t1 | AT1G09480 | 38.148 | 270 | 151 | 7 | 1 | 261 | 48 | 310 | 6.33e-47 | 160 |
| MS.gene27779.t1 | AT1G09510 | 37.500 | 256 | 147 | 5 | 1 | 247 | 1 | 252 | 1.32e-45 | 156 |
| MS.gene27779.t1 | AT5G19440 | 39.070 | 215 | 123 | 4 | 4 | 214 | 5 | 215 | 1.63e-44 | 153 |
| MS.gene27779.t1 | AT1G51410 | 37.963 | 216 | 127 | 3 | 2 | 214 | 3 | 214 | 1.50e-43 | 150 |
| MS.gene27779.t1 | AT1G09500 | 35.409 | 257 | 152 | 6 | 1 | 247 | 1 | 253 | 2.90e-42 | 146 |
| MS.gene27779.t1 | AT1G09500 | 35.798 | 257 | 151 | 7 | 1 | 247 | 1 | 253 | 8.67e-42 | 146 |
| MS.gene27779.t1 | AT2G02400 | 35.401 | 274 | 154 | 9 | 4 | 262 | 2 | 267 | 1.53e-39 | 140 |
| MS.gene27779.t1 | AT4G27250 | 28.616 | 318 | 161 | 7 | 9 | 264 | 14 | 327 | 4.77e-39 | 139 |
| MS.gene27779.t1 | AT2G33590 | 41.026 | 195 | 106 | 7 | 5 | 196 | 6 | 194 | 1.94e-37 | 135 |
| MS.gene27779.t1 | AT1G68540 | 30.435 | 322 | 160 | 10 | 10 | 273 | 6 | 321 | 6.65e-37 | 133 |
| MS.gene27779.t1 | AT2G33600 | 44.615 | 195 | 99 | 7 | 5 | 196 | 6 | 194 | 7.24e-37 | 133 |
| MS.gene27779.t1 | AT5G58490 | 38.571 | 210 | 121 | 5 | 8 | 214 | 9 | 213 | 1.81e-36 | 132 |
| MS.gene27779.t1 | AT4G27250 | 31.579 | 228 | 141 | 4 | 9 | 225 | 14 | 237 | 1.83e-36 | 133 |
| MS.gene27779.t1 | AT1G25460 | 31.034 | 319 | 160 | 9 | 10 | 273 | 6 | 319 | 1.70e-34 | 127 |
| MS.gene27779.t1 | AT1G09490 | 35.169 | 236 | 138 | 6 | 35 | 261 | 3 | 232 | 1.54e-32 | 121 |
| MS.gene27779.t1 | AT1G15950 | 31.173 | 324 | 151 | 14 | 8 | 273 | 13 | 322 | 4.02e-32 | 121 |
| MS.gene27779.t1 | AT1G15950 | 31.173 | 324 | 151 | 14 | 8 | 273 | 13 | 322 | 4.02e-32 | 121 |
| MS.gene27779.t1 | AT1G76470 | 37.500 | 208 | 122 | 4 | 5 | 210 | 4 | 205 | 8.00e-32 | 120 |
| MS.gene27779.t1 | AT1G15950 | 39.524 | 210 | 111 | 9 | 8 | 215 | 13 | 208 | 1.38e-31 | 118 |
| MS.gene27779.t1 | AT1G15950 | 39.524 | 210 | 111 | 9 | 8 | 215 | 13 | 208 | 1.91e-31 | 118 |
| MS.gene27779.t1 | AT1G15950 | 39.524 | 210 | 111 | 9 | 8 | 215 | 13 | 208 | 2.01e-31 | 118 |
| MS.gene27779.t1 | AT1G80820 | 38.571 | 210 | 113 | 9 | 8 | 215 | 8 | 203 | 2.40e-31 | 117 |
| MS.gene27779.t1 | AT1G15950 | 39.524 | 210 | 111 | 9 | 8 | 215 | 13 | 208 | 5.01e-31 | 118 |
| MS.gene27779.t1 | AT1G80820 | 30.031 | 323 | 156 | 14 | 8 | 273 | 8 | 317 | 5.24e-31 | 118 |
| MS.gene27779.t1 | AT1G09500 | 33.028 | 218 | 133 | 6 | 40 | 247 | 5 | 219 | 5.75e-26 | 103 |
| MS.gene27779.t1 | AT5G14700 | 32.195 | 205 | 120 | 6 | 4 | 196 | 51 | 248 | 1.33e-21 | 92.0 |
| MS.gene27779.t1 | AT5G14700 | 32.195 | 205 | 120 | 6 | 4 | 196 | 51 | 248 | 2.76e-21 | 92.4 |
| MS.gene27779.t1 | AT2G23910 | 27.638 | 199 | 133 | 6 | 9 | 204 | 11 | 201 | 6.14e-17 | 79.3 |
| MS.gene27779.t1 | AT2G23910 | 27.638 | 199 | 133 | 6 | 9 | 204 | 11 | 201 | 7.54e-17 | 78.6 |
| MS.gene27779.t1 | AT2G23910 | 27.638 | 199 | 133 | 6 | 9 | 204 | 11 | 201 | 8.00e-17 | 78.6 |
| MS.gene27779.t1 | AT4G30470 | 27.320 | 194 | 123 | 6 | 9 | 196 | 11 | 192 | 1.12e-14 | 72.8 |
| MS.gene27779.t1 | AT4G33360 | 28.947 | 190 | 115 | 7 | 7 | 196 | 2 | 171 | 1.53e-11 | 63.9 |
| MS.gene27779.t1 | AT4G33360 | 28.947 | 190 | 115 | 7 | 7 | 196 | 14 | 183 | 1.74e-11 | 63.9 |
| MS.gene27779.t1 | AT4G33360 | 28.947 | 190 | 115 | 7 | 7 | 196 | 14 | 183 | 1.97e-11 | 63.9 |
Find 52 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGATATTCTGGATATT+TGG | 0.178162 | 7.3:+30595523 | None:intergenic |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.206019 | 7.3:-30596181 | MS.gene27779:CDS |
| ACTGTTAGTATTTGATATTC+TGG | 0.207664 | 7.3:+30595515 | None:intergenic |
| CTTGAATTTGGTGAACAAAA+TGG | 0.220583 | 7.3:-30596169 | MS.gene27779:CDS |
| ACAAAACGACCAACAATAAA+AGG | 0.257121 | 7.3:+30596121 | None:intergenic |
| ATCAAGAGTCTCCTTGAAAA+TGG | 0.290608 | 7.3:-30597303 | MS.gene27779:CDS |
| GATGAGTTGAAGGAAATTAA+AGG | 0.307837 | 7.3:-30595491 | MS.gene27779:CDS |
| GGTTCTGCTGTTTCATTCAA+TGG | 0.327787 | 7.3:-30596307 | MS.gene27779:CDS |
| AGTTTCTTCGTGTTTAAATC+TGG | 0.331608 | 7.3:+30595458 | None:intergenic |
| CTTAGAAGTGTTAAACCATT+TGG | 0.332594 | 7.3:-30596235 | MS.gene27779:CDS |
| AGAACCGTCGATGGCGCATT+AGG | 0.342006 | 7.3:-30596388 | MS.gene27779:CDS |
| TTATGCTGTTTCTAAGACTT+TGG | 0.354833 | 7.3:-30596206 | MS.gene27779:CDS |
| AAAGGAAGAGTATGTGTAAC+TGG | 0.362480 | 7.3:-30597354 | MS.gene27779:CDS |
| TATTGAGAAAGCCCTTGTTT+TGG | 0.381480 | 7.3:-30596077 | MS.gene27779:CDS |
| TTGAATTTGGTGAACAAAAT+GGG | 0.381597 | 7.3:-30596168 | MS.gene27779:CDS |
| ATTGCTGCAGCAAAACTGTC+TGG | 0.389083 | 7.3:+30596490 | None:intergenic |
| TGACATTAACAGAACGTAAG+AGG | 0.420276 | 7.3:-30596585 | MS.gene27779:intron |
| TCACTCACGGCGAAGTCAAT+TGG | 0.434477 | 7.3:+30596433 | None:intergenic |
| TCAATAGAATCAGGAAGCTT+AGG | 0.441975 | 7.3:+30596094 | None:intergenic |
| AGGGCTTTCTCAATAGAATC+AGG | 0.454202 | 7.3:+30596085 | None:intergenic |
| ACTAACAGTAGATGAGTTGA+AGG | 0.472358 | 7.3:-30595501 | MS.gene27779:CDS |
| ATGTGTTGGATGAGAGTGAT+TGG | 0.477053 | 7.3:-30596273 | MS.gene27779:CDS |
| ACAGCATAATTCCAACCAAA+TGG | 0.484910 | 7.3:+30596220 | None:intergenic |
| GAAGTGTTAAACCATTTGGT+TGG | 0.489175 | 7.3:-30596231 | MS.gene27779:CDS |
| ATGCACCGGGTAGATTTGTC+AGG | 0.495956 | 7.3:+30596551 | None:intergenic |
| GTCCAAATGGCTGAAGGAAA+AGG | 0.516695 | 7.3:-30597372 | None:intergenic |
| ATTCAATGTTGCAAGGAGAA+AGG | 0.530160 | 7.3:-30595380 | MS.gene27779:CDS |
| AGTATGTGTAACTGGAGGTA+CGG | 0.533565 | 7.3:-30597346 | MS.gene27779:CDS |
| ACCTGGATCAGCTCTAATAG+TGG | 0.533677 | 7.3:+30597266 | None:intergenic |
| ACGAAGAAACTCGTGGATGC+TGG | 0.539479 | 7.3:-30595446 | MS.gene27779:CDS |
| TATTTCTTCTGGTTCACTCA+CGG | 0.542470 | 7.3:+30596420 | None:intergenic |
| ACTGTCTGGGTTGCTTAGAT+CGG | 0.544855 | 7.3:+30596504 | None:intergenic |
| CAGCAATCGAAGGATGTGTC+GGG | 0.548077 | 7.3:-30596474 | MS.gene27779:CDS |
| TGGAAAAGACAATGATGTGT+TGG | 0.554067 | 7.3:-30596287 | MS.gene27779:CDS |
| TGAAGGAAATTAAAGGTGCA+AGG | 0.554380 | 7.3:-30595484 | MS.gene27779:CDS |
| ACCACTATTAGAGCTGATCC+AGG | 0.558931 | 7.3:-30597267 | MS.gene27779:intron |
| AATGCCTAATGCGCCATCGA+CGG | 0.565238 | 7.3:+30596384 | None:intergenic |
| GACATTAACAGAACGTAAGA+GGG | 0.566904 | 7.3:-30596584 | MS.gene27779:intron |
| GTATGTGTAACTGGAGGTAC+GGG | 0.572789 | 7.3:-30597345 | MS.gene27779:CDS |
| GCAGCAATCGAAGGATGTGT+CGG | 0.579142 | 7.3:-30596475 | MS.gene27779:CDS |
| TTGCTGCAGCAAAACTGTCT+GGG | 0.581343 | 7.3:+30596491 | None:intergenic |
| AAGAGTGTCCAAATGGCTGA+AGG | 0.588094 | 7.3:-30597378 | None:intergenic |
| AGGTTTATATACACTTCAAG+TGG | 0.594598 | 7.3:-30596328 | MS.gene27779:CDS |
| TCATACCTAATACCAAAACA+AGG | 0.596808 | 7.3:+30596065 | None:intergenic |
| GGCGAAGTCAATTGGTGAAG+CGG | 0.597111 | 7.3:+30596441 | None:intergenic |
| TGAATTCAAAGACAGTGAAG+AGG | 0.602314 | 7.3:-30596348 | MS.gene27779:CDS |
| CGATGCAATTCAATGTTGCA+AGG | 0.602642 | 7.3:-30595387 | MS.gene27779:CDS |
| AGTCAATTGGTGAAGCGGTG+TGG | 0.629454 | 7.3:+30596446 | None:intergenic |
| AGCTTCCTGACAAATCTACC+CGG | 0.636776 | 7.3:-30596556 | MS.gene27779:CDS |
| TTTAAACACGAAGAAACTCG+TGG | 0.659776 | 7.3:-30595453 | MS.gene27779:CDS |
| CATACCTAATACCAAAACAA+GGG | 0.680642 | 7.3:+30596066 | None:intergenic |
| GGAAGAGTATGTGTAACTGG+AGG | 0.698516 | 7.3:-30597351 | MS.gene27779:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGAAAATATTAAAATAAAA+AGG | + | chr7.3:30595507-30595526 | None:intergenic | 10.0% |
| !! | AATTAACTATATTGTGTGTT+TGG | - | chr7.3:30595543-30595562 | MS.gene27779:intron | 20.0% |
| !! | GTATATAGAAACAACTATAA+AGG | + | chr7.3:30595677-30595696 | None:intergenic | 20.0% |
| !! | TATTTGATATTCTGGATATT+TGG | + | chr7.3:30597216-30597235 | None:intergenic | 20.0% |
| !! | TGAATTTGACAAGATTATAA+TGG | + | chr7.3:30595811-30595830 | None:intergenic | 20.0% |
| ! | AAATTCACAGTAATTCTGTT+AGG | - | chr7.3:30595824-30595843 | MS.gene27779:intron | 25.0% |
| ! | AATTGTGGTAAAAACTTCTT+TGG | - | chr7.3:30595764-30595783 | MS.gene27779:intron | 25.0% |
| ! | ACTGTTAGTATTTGATATTC+TGG | + | chr7.3:30597224-30597243 | None:intergenic | 25.0% |
| ! | GGAAATTATAAGCATTTGTT+TGG | + | chr7.3:30596123-30596142 | None:intergenic | 25.0% |
| ! | TCTGTTAATGTCAAAAACAT+AGG | + | chr7.3:30596144-30596163 | None:intergenic | 25.0% |
| !! | AAAGAAACATGAGTTGAATA+AGG | + | chr7.3:30596705-30596724 | None:intergenic | 25.0% |
| !! | AGAAGTTTTTACCACAATTA+CGG | + | chr7.3:30595763-30595782 | None:intergenic | 25.0% |
| !! | GTCAATTTAAAACCTAAACT+CGG | - | chr7.3:30596989-30597008 | MS.gene27779:intron | 25.0% |
| !! | TTGAATTTGGTGAACAAAAT+GGG | - | chr7.3:30596568-30596587 | MS.gene27779:CDS | 25.0% |
| !! | TTGATTCTTCCTTTTATTGT+TGG | - | chr7.3:30596606-30596625 | MS.gene27779:intron | 25.0% |
| AAAAGGGTAATAAATTCACC+TGG | + | chr7.3:30595490-30595509 | None:intergenic | 30.0% | |
| AAATTATGACCTATGAAGCA+CGG | - | chr7.3:30596744-30596763 | MS.gene27779:intron | 30.0% | |
| ACAAAACGACCAACAATAAA+AGG | + | chr7.3:30596618-30596637 | None:intergenic | 30.0% | |
| AGGTTTATATACACTTCAAG+TGG | - | chr7.3:30596408-30596427 | MS.gene27779:CDS | 30.0% | |
| AGTTTCTTCGTGTTTAAATC+TGG | + | chr7.3:30597281-30597300 | None:intergenic | 30.0% | |
| CATACCTAATACCAAAACAA+GGG | + | chr7.3:30596673-30596692 | None:intergenic | 30.0% | |
| TCATACCTAATACCAAAACA+AGG | + | chr7.3:30596674-30596693 | None:intergenic | 30.0% | |
| TCTTCAATAGGTACAATGAA+TGG | + | chr7.3:30597173-30597192 | None:intergenic | 30.0% | |
| TTCACAAATAGAGTAAAACC+TGG | + | chr7.3:30595624-30595643 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACATGTGT+CGG | - | chr7.3:30596822-30596841 | MS.gene27779:intron | 30.0% | |
| ! | ATGAGATCGTTGATAAAGAT+TGG | - | chr7.3:30596941-30596960 | MS.gene27779:intron | 30.0% |
| ! | CTTGAATTTGGTGAACAAAA+TGG | - | chr7.3:30596567-30596586 | MS.gene27779:CDS | 30.0% |
| ! | GATGAGTTGAAGGAAATTAA+AGG | - | chr7.3:30597245-30597264 | MS.gene27779:intron | 30.0% |
| ! | GGTTTTACTCTATTTGTGAA+TGG | - | chr7.3:30595624-30595643 | MS.gene27779:intron | 30.0% |
| ! | GTTGAAGAAATGTAGCTTTT+CGG | + | chr7.3:30596211-30596230 | None:intergenic | 30.0% |
| ! | TTCCAAGTCGATAAACTTTT+TGG | + | chr7.3:30595850-30595869 | None:intergenic | 30.0% |
| !! | AATGGTCATTAGTCTTGATT+TGG | - | chr7.3:30595642-30595661 | MS.gene27779:intron | 30.0% |
| !! | ATGGTCATTAGTCTTGATTT+GGG | - | chr7.3:30595643-30595662 | MS.gene27779:intron | 30.0% |
| !! | CTTAGAAGTGTTAAACCATT+TGG | - | chr7.3:30596501-30596520 | MS.gene27779:CDS | 30.0% |
| !! | CTTTTTGTCACTATTTCTTC+TGG | + | chr7.3:30596330-30596349 | None:intergenic | 30.0% |
| !! | TATATTGTGTGTTTGGTTTG+TGG | - | chr7.3:30595550-30595569 | MS.gene27779:intron | 30.0% |
| !! | TTATGCTGTTTCTAAGACTT+TGG | - | chr7.3:30596530-30596549 | MS.gene27779:CDS | 30.0% |
| !!! | CATTTTTGTTTAACTTGACC+AGG | - | chr7.3:30595603-30595622 | MS.gene27779:intron | 30.0% |
| ACAGCATAATTCCAACCAAA+TGG | + | chr7.3:30596519-30596538 | None:intergenic | 35.0% | |
| AGTTGAGACATCTCTTCAAT+AGG | + | chr7.3:30597185-30597204 | None:intergenic | 35.0% | |
| ATCAAGAGTCTCCTTGAAAA+TGG | - | chr7.3:30595433-30595452 | MS.gene27779:CDS | 35.0% | |
| ATTCAATGTTGCAAGGAGAA+AGG | - | chr7.3:30597356-30597375 | MS.gene27779:CDS | 35.0% | |
| CAACGATCTCATGATTGAAA+TGG | + | chr7.3:30596933-30596952 | None:intergenic | 35.0% | |
| CAGTCATAATCTATGAAGCA+CGG | + | chr7.3:30596877-30596896 | None:intergenic | 35.0% | |
| CAGTTTCTCTAGCCTAAAAT+CGG | + | chr7.3:30595961-30595980 | None:intergenic | 35.0% | |
| CTCGTATATATCTGAGTTCA+CGG | - | chr7.3:30595709-30595728 | MS.gene27779:intron | 35.0% | |
| GACATTAACAGAACGTAAGA+GGG | - | chr7.3:30596152-30596171 | MS.gene27779:CDS | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.3:30596555-30596574 | MS.gene27779:CDS | 35.0% | |
| GCAGGCAAAAAAGAACAAAT+TGG | - | chr7.3:30597050-30597069 | MS.gene27779:intron | 35.0% | |
| TAGAGAAACTGCAAAGGATT+TGG | - | chr7.3:30595970-30595989 | MS.gene27779:intron | 35.0% | |
| TCAATAGAATCAGGAAGCTT+AGG | + | chr7.3:30596645-30596664 | None:intergenic | 35.0% | |
| TCTACTTGAGAATTCTGTTC+CGG | - | chr7.3:30597127-30597146 | MS.gene27779:intron | 35.0% | |
| TGAATTCAAAGACAGTGAAG+AGG | - | chr7.3:30596388-30596407 | MS.gene27779:CDS | 35.0% | |
| TGACATTAACAGAACGTAAG+AGG | - | chr7.3:30596151-30596170 | MS.gene27779:CDS | 35.0% | |
| TGGAAAAGACAATGATGTGT+TGG | - | chr7.3:30596449-30596468 | MS.gene27779:CDS | 35.0% | |
| TTTAAACACGAAGAAACTCG+TGG | - | chr7.3:30597283-30597302 | MS.gene27779:CDS | 35.0% | |
| ! | AAAGGAAGAGTATGTGTAAC+TGG | - | chr7.3:30595382-30595401 | MS.gene27779:CDS | 35.0% |
| ! | ACTAACAGTAGATGAGTTGA+AGG | - | chr7.3:30597235-30597254 | MS.gene27779:intron | 35.0% |
| ! | GAAGTGTTAAACCATTTGGT+TGG | - | chr7.3:30596505-30596524 | MS.gene27779:CDS | 35.0% |
| ! | TGAAGGAAATTAAAGGTGCA+AGG | - | chr7.3:30597252-30597271 | MS.gene27779:intron | 35.0% |
| !! | ACATGTTGATGATGTAGCTA+GGG | - | chr7.3:30597094-30597113 | MS.gene27779:intron | 35.0% |
| !! | GTGTTTGGTTTGTGGAATAT+GGG | - | chr7.3:30595558-30595577 | MS.gene27779:intron | 35.0% |
| !! | TACATGTTGATGATGTAGCT+AGG | - | chr7.3:30597093-30597112 | MS.gene27779:intron | 35.0% |
| !! | TATTGAGAAAGCCCTTGTTT+TGG | - | chr7.3:30596659-30596678 | MS.gene27779:intron | 35.0% |
| !! | TATTTCTTCTGGTTCACTCA+CGG | + | chr7.3:30596319-30596338 | None:intergenic | 35.0% |
| !! | TGACAGAGTATCCATTTTCA+AGG | + | chr7.3:30595447-30595466 | None:intergenic | 35.0% |
| !! | TGTGTTTGGTTTGTGGAATA+TGG | - | chr7.3:30595557-30595576 | MS.gene27779:intron | 35.0% |
| !!! | AAAGCCCTTGTTTTGGTATT+AGG | - | chr7.3:30596666-30596685 | MS.gene27779:intron | 35.0% |
| AACGGTCATATACCGAGTTT+AGG | + | chr7.3:30597004-30597023 | None:intergenic | 40.0% | |
| AGGGCTTTCTCAATAGAATC+AGG | + | chr7.3:30596654-30596673 | None:intergenic | 40.0% | |
| AGTATGTGTAACTGGAGGTA+CGG | - | chr7.3:30595390-30595409 | MS.gene27779:CDS | 40.0% | |
| ATGTGTTGGATGAGAGTGAT+TGG | - | chr7.3:30596463-30596482 | MS.gene27779:CDS | 40.0% | |
| CATCATCAACATGTACCATG+TGG | + | chr7.3:30597088-30597107 | None:intergenic | 40.0% | |
| CGATCTCATGATTGAAATGG+CGG | + | chr7.3:30596930-30596949 | None:intergenic | 40.0% | |
| CGATGCAATTCAATGTTGCA+AGG | - | chr7.3:30597349-30597368 | MS.gene27779:CDS | 40.0% | |
| CTACTTGAGAATTCTGTTCC+GGG | - | chr7.3:30597128-30597147 | MS.gene27779:intron | 40.0% | |
| GCGGTATCATATTCTGACTT+GGG | + | chr7.3:30596911-30596930 | None:intergenic | 40.0% | |
| GTCAATGGGTAAAGATCGAA+CGG | + | chr7.3:30597022-30597041 | None:intergenic | 40.0% | |
| TTAGGCTAGAGAAACTGCAA+AGG | - | chr7.3:30595964-30595983 | MS.gene27779:intron | 40.0% | |
| ! | GGCCAAAAAGTTTATCGACT+TGG | - | chr7.3:30595845-30595864 | MS.gene27779:intron | 40.0% |
| !! | CGACTTAGATTTAGCTTGAG+AGG | + | chr7.3:30595882-30595901 | None:intergenic | 40.0% |
| !! | GGTTCTGCTGTTTCATTCAA+TGG | - | chr7.3:30596429-30596448 | MS.gene27779:CDS | 40.0% |
| !! | TGAATCCATCGACCGATTTT+AGG | - | chr7.3:30595946-30595965 | MS.gene27779:intron | 40.0% |
| ACCACAATTACGGTGACATG+TGG | + | chr7.3:30595753-30595772 | None:intergenic | 45.0% | |
| ACCACATGTCACCGTAATTG+TGG | - | chr7.3:30595749-30595768 | MS.gene27779:intron | 45.0% | |
| ACCACTATTAGAGCTGATCC+AGG | - | chr7.3:30595469-30595488 | MS.gene27779:CDS | 45.0% | |
| ACTGTCTGGGTTGCTTAGAT+CGG | + | chr7.3:30596235-30596254 | None:intergenic | 45.0% | |
| AGCTTCCTGACAAATCTACC+CGG | - | chr7.3:30596180-30596199 | MS.gene27779:CDS | 45.0% | |
| ATTGCTGCAGCAAAACTGTC+TGG | + | chr7.3:30596249-30596268 | None:intergenic | 45.0% | |
| GAGCAATTGTATCTACCTCC+CGG | + | chr7.3:30597149-30597168 | None:intergenic | 45.0% | |
| GCCTGCACATCAAAGTCAAT+GGG | + | chr7.3:30597036-30597055 | None:intergenic | 45.0% | |
| GGCGGTATCATATTCTGACT+TGG | + | chr7.3:30596912-30596931 | None:intergenic | 45.0% | |
| GTGACAAAAAGAACCGTCGA+TGG | - | chr7.3:30596339-30596358 | MS.gene27779:CDS | 45.0% | |
| TCTAGCCTAAAATCGGTCGA+TGG | + | chr7.3:30595954-30595973 | None:intergenic | 45.0% | |
| TGCCTGCACATCAAAGTCAA+TGG | + | chr7.3:30597037-30597056 | None:intergenic | 45.0% | |
| TGTCTGTATCCGTGCTTCAT+AGG | + | chr7.3:30596756-30596775 | None:intergenic | 45.0% | |
| TTGCTGCAGCAAAACTGTCT+GGG | + | chr7.3:30596248-30596267 | None:intergenic | 45.0% | |
| ! | ACCTGGATCAGCTCTAATAG+TGG | + | chr7.3:30595473-30595492 | None:intergenic | 45.0% |
| ! | AGTTTTGCTGCAGCAATCGA+AGG | - | chr7.3:30596252-30596271 | MS.gene27779:CDS | 45.0% |
| ! | ATGTAGCTTTTCGGATGCAC+CGG | + | chr7.3:30596202-30596221 | None:intergenic | 45.0% |
| ! | GGAAGAGTATGTGTAACTGG+AGG | - | chr7.3:30595385-30595404 | MS.gene27779:CDS | 45.0% |
| ! | GTACGGGTTTTCTTGGTTCA+TGG | - | chr7.3:30595407-30595426 | MS.gene27779:CDS | 45.0% |
| ! | GTATGTGTAACTGGAGGTAC+GGG | - | chr7.3:30595391-30595410 | MS.gene27779:CDS | 45.0% |
| !! | ACCCATTGACTTTGATGTGC+AGG | - | chr7.3:30597032-30597051 | MS.gene27779:intron | 45.0% |
| !! | TGAAAATATTAAAATAAAAA+GGG | + | chr7.3:30595506-30595525 | None:intergenic | 5.0% |
| AATGCCTAATGCGCCATCGA+CGG | + | chr7.3:30596355-30596374 | None:intergenic | 50.0% | |
| ACGAAGAAACTCGTGGATGC+TGG | - | chr7.3:30597290-30597309 | MS.gene27779:CDS | 50.0% | |
| AGTCAATTGGTGAAGCGGTG+TGG | + | chr7.3:30596293-30596312 | None:intergenic | 50.0% | |
| ATGCACCGGGTAGATTTGTC+AGG | + | chr7.3:30596188-30596207 | None:intergenic | 50.0% | |
| CAGCAATCGAAGGATGTGTC+GGG | - | chr7.3:30596262-30596281 | MS.gene27779:CDS | 50.0% | |
| CTTGAGAATTCTGTTCCGGG+AGG | - | chr7.3:30597131-30597150 | MS.gene27779:intron | 50.0% | |
| GCAGCAATCGAAGGATGTGT+CGG | - | chr7.3:30596261-30596280 | MS.gene27779:CDS | 50.0% | |
| GGCGAAGTCAATTGGTGAAG+CGG | + | chr7.3:30596298-30596317 | None:intergenic | 50.0% | |
| TACAGACACTGGACACGACA+CGG | - | chr7.3:30596768-30596787 | MS.gene27779:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr7.3:30596866-30596885 | None:intergenic | 50.0% | |
| TCACTCACGGCGAAGTCAAT+TGG | + | chr7.3:30596306-30596325 | None:intergenic | 50.0% | |
| TGAAGCACGGATACAGACAC+TGG | - | chr7.3:30596757-30596776 | MS.gene27779:intron | 50.0% | |
| TGGTGTGACACGTTTCCACA+TGG | - | chr7.3:30597070-30597089 | MS.gene27779:intron | 50.0% | |
| ! | TGTAGCTTTTCGGATGCACC+GGG | + | chr7.3:30596201-30596220 | None:intergenic | 50.0% |
| !! | ACTGGAGGTACGGGTTTTCT+TGG | - | chr7.3:30595400-30595419 | MS.gene27779:CDS | 50.0% |
| AGAACCGTCGATGGCGCATT+AGG | - | chr7.3:30596348-30596367 | MS.gene27779:CDS | 55.0% | |
| ATGAAGCACGGACACTCCTC+GGG | + | chr7.3:30596865-30596884 | None:intergenic | 55.0% | |
| GCACGGACACTCCTCGGGTT+AGG | + | chr7.3:30596860-30596879 | None:intergenic | 65.0% | |
| GTCGTGTCACGCCTAACCCG+AGG | - | chr7.3:30596846-30596865 | MS.gene27779:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 30595370 | 30597388 | 30595370 | ID=MS.gene27779 |
| chr7.3 | mRNA | 30595370 | 30597388 | 30595370 | ID=MS.gene27779.t1;Parent=MS.gene27779 |
| chr7.3 | exon | 30597268 | 30597388 | 30597268 | ID=MS.gene27779.t1.exon1;Parent=MS.gene27779.t1 |
| chr7.3 | CDS | 30597268 | 30597388 | 30597268 | ID=cds.MS.gene27779.t1;Parent=MS.gene27779.t1 |
| chr7.3 | exon | 30596071 | 30596595 | 30596071 | ID=MS.gene27779.t1.exon2;Parent=MS.gene27779.t1 |
| chr7.3 | CDS | 30596071 | 30596595 | 30596071 | ID=cds.MS.gene27779.t1;Parent=MS.gene27779.t1 |
| chr7.3 | exon | 30595370 | 30595545 | 30595370 | ID=MS.gene27779.t1.exon3;Parent=MS.gene27779.t1 |
| chr7.3 | CDS | 30595370 | 30595545 | 30595370 | ID=cds.MS.gene27779.t1;Parent=MS.gene27779.t1 |
| Gene Sequence |
| Protein sequence |
