Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92808.t1 | Q40316.1 | 98.8 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 7.80E-184 | 652.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92808.t1 | Q40316 | 98.8 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 1.9e-186 | 652.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92808.t1 | A2Q3W4 | 98.8 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 9.6e-184 | 652.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene92808 | -0.839417 | 1.60E-57 | -1.69E-46 |
| MS.gene049259 | MS.gene92808 | 0.867252 | 1.57E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene92808 | -0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene92808 | 0.810521 | 1.11E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene92808 | 0.821061 | 4.93E-53 | -1.69E-46 |
| MS.gene04986 | MS.gene92808 | 0.831305 | 1.80E-55 | -1.69E-46 |
| MS.gene050082 | MS.gene92808 | 0.801679 | 8.04E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene92808 | -0.809733 | 1.63E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene92808 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene92808 | -0.803054 | 4.19E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene92808 | 0.814703 | 1.35E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene92808 | -0.855034 | 8.27E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene92808 | -0.831202 | 1.91E-55 | -1.69E-46 |
| MS.gene050381 | MS.gene92808 | 0.887064 | 1.98E-72 | -1.69E-46 |
| MS.gene050496 | MS.gene92808 | -0.841089 | 5.87E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene92808 | -0.845509 | 3.89E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene92808 | -0.802592 | 5.21E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene92808 | -0.843482 | 1.36E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene92808 | -0.807029 | 6.17E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene92808 | -0.853777 | 1.91E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene92808 | -0.855217 | 7.32E-62 | -1.69E-46 |
| MS.gene050883 | MS.gene92808 | 0.889967 | 1.51E-73 | -1.69E-46 |
| MS.gene050986 | MS.gene92808 | -0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene051044 | MS.gene92808 | 0.85573 | 5.19E-62 | -1.69E-46 |
| MS.gene05104 | MS.gene92808 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene92808 | 0.889247 | 2.87E-73 | -1.69E-46 |
| MS.gene051138 | MS.gene92808 | 0.84938 | 3.36E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene92808 | -0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene92808 | 0.814031 | 1.90E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene92808 | 0.816015 | 6.88E-52 | -1.69E-46 |
| MS.gene051410 | MS.gene92808 | 0.81778 | 2.76E-52 | -1.69E-46 |
| MS.gene05141 | MS.gene92808 | 0.82073 | 5.88E-53 | -1.69E-46 |
| MS.gene051863 | MS.gene92808 | 0.826747 | 2.29E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene92808 | 0.841826 | 3.75E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene92808 | -0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene92808 | -0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene92808 | -0.804591 | 2.01E-49 | -1.69E-46 |
| MS.gene052566 | MS.gene92808 | 0.830532 | 2.79E-55 | -1.69E-46 |
| MS.gene052802 | MS.gene92808 | 0.822495 | 2.30E-53 | -1.69E-46 |
| MS.gene053069 | MS.gene92808 | 0.839783 | 1.29E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene92808 | -0.807346 | 5.29E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene92808 | 0.859852 | 3.11E-63 | -1.69E-46 |
| MS.gene053488 | MS.gene92808 | 0.826849 | 2.16E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene92808 | 0.802531 | 5.37E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene92808 | 0.868108 | 8.34E-66 | -1.69E-46 |
| MS.gene053826 | MS.gene92808 | 0.839655 | 1.39E-57 | -1.69E-46 |
| MS.gene053887 | MS.gene92808 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene92808 | -0.803392 | 3.56E-49 | -1.69E-46 |
| MS.gene054054 | MS.gene92808 | 0.829242 | 5.75E-55 | -1.69E-46 |
| MS.gene054056 | MS.gene92808 | 0.862216 | 5.93E-64 | -1.69E-46 |
| MS.gene054706 | MS.gene92808 | 0.812252 | 4.66E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene92808 | 0.829368 | 5.35E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene92808 | -0.824301 | 8.69E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene92808 | 0.889877 | 1.63E-73 | -1.69E-46 |
| MS.gene055139 | MS.gene92808 | 0.820221 | 7.69E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene92808 | 0.858533 | 7.72E-63 | -1.69E-46 |
| MS.gene055202 | MS.gene92808 | 0.849136 | 3.93E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene92808 | -0.822821 | 1.93E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene92808 | -0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene92808 | -0.815799 | 7.68E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene92808 | -0.807368 | 5.23E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene92808 | -0.815498 | 8.96E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene92808 | -0.825578 | 4.34E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene92808 | 0.861254 | 1.17E-63 | -1.69E-46 |
| MS.gene056224 | MS.gene92808 | 0.837179 | 6.05E-57 | -1.69E-46 |
| MS.gene056310 | MS.gene92808 | 0.874915 | 4.65E-68 | -1.69E-46 |
| MS.gene056311 | MS.gene92808 | 0.890265 | 1.15E-73 | -1.69E-46 |
| MS.gene056313 | MS.gene92808 | 0.861619 | 9.03E-64 | -1.69E-46 |
| MS.gene056504 | MS.gene92808 | -0.858051 | 1.07E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene92808 | -0.810383 | 1.18E-50 | -1.69E-46 |
| MS.gene056530 | MS.gene92808 | 0.811269 | 7.62E-51 | -1.69E-46 |
| MS.gene056761 | MS.gene92808 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene056856 | MS.gene92808 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene92808 | 0.866301 | 3.15E-65 | -1.69E-46 |
| MS.gene057473 | MS.gene92808 | 0.808091 | 3.67E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene92808 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene92808 | 0.82915 | 6.05E-55 | -1.69E-46 |
| MS.gene057768 | MS.gene92808 | 0.829378 | 5.32E-55 | -1.69E-46 |
| MS.gene058068 | MS.gene92808 | 0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene92808 | 0.853582 | 2.17E-61 | -1.69E-46 |
| MS.gene058099 | MS.gene92808 | 0.8846 | 1.67E-71 | -1.69E-46 |
| MS.gene058108 | MS.gene92808 | 0.870903 | 1.03E-66 | -1.69E-46 |
| MS.gene058109 | MS.gene92808 | 0.908964 | 9.61E-82 | -1.69E-46 |
| MS.gene058111 | MS.gene92808 | 0.890256 | 1.16E-73 | -1.69E-46 |
| MS.gene058117 | MS.gene92808 | 0.833658 | 4.70E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene92808 | 0.939558 | 1.04E-99 | -1.69E-46 |
| MS.gene058173 | MS.gene92808 | 0.939725 | 7.84E-100 | -1.69E-46 |
| MS.gene058175 | MS.gene92808 | 0.944147 | 3.32E-103 | -1.69E-46 |
| MS.gene058179 | MS.gene92808 | 0.822818 | 1.93E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene92808 | 0.80917 | 2.16E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene92808 | 0.826205 | 3.08E-54 | -1.69E-46 |
| MS.gene058269 | MS.gene92808 | 0.807235 | 5.58E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene92808 | 0.817972 | 2.50E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene92808 | -0.800655 | 1.30E-48 | -1.69E-46 |
| MS.gene058493 | MS.gene92808 | 0.864998 | 8.12E-65 | -1.69E-46 |
| MS.gene058494 | MS.gene92808 | 0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene058496 | MS.gene92808 | 0.828837 | 7.20E-55 | -1.69E-46 |
| MS.gene058628 | MS.gene92808 | 0.848472 | 6.00E-60 | -1.69E-46 |
| MS.gene058629 | MS.gene92808 | 0.834096 | 3.65E-56 | -1.69E-46 |
| MS.gene058630 | MS.gene92808 | 0.849597 | 2.92E-60 | -1.69E-46 |
| MS.gene05884 | MS.gene92808 | 0.844724 | 6.33E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene92808 | -0.827807 | 1.28E-54 | -1.69E-46 |
| MS.gene059037 | MS.gene92808 | 0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene059038 | MS.gene92808 | 0.819251 | 1.28E-52 | -1.69E-46 |
| MS.gene059044 | MS.gene92808 | 0.80459 | 2.01E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene92808 | 0.914354 | 2.12E-84 | -1.69E-46 |
| MS.gene059223 | MS.gene92808 | 0.833546 | 5.01E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene92808 | -0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene059690 | MS.gene92808 | 0.846768 | 1.77E-59 | -1.69E-46 |
| MS.gene059691 | MS.gene92808 | 0.809731 | 1.64E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene92808 | 0.845591 | 3.69E-59 | -1.69E-46 |
| MS.gene059697 | MS.gene92808 | 0.849572 | 2.97E-60 | -1.69E-46 |
| MS.gene059701 | MS.gene92808 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene92808 | 0.809828 | 1.56E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene92808 | -0.867896 | 9.76E-66 | -1.69E-46 |
| MS.gene059916 | MS.gene92808 | 0.820718 | 5.91E-53 | -1.69E-46 |
| MS.gene059943 | MS.gene92808 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene92808 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene92808 | -0.807618 | 4.63E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene92808 | 0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene92808 | 0.852499 | 4.43E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene92808 | -0.800944 | 1.14E-48 | -1.69E-46 |
| MS.gene060778 | MS.gene92808 | -0.830803 | 2.39E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene92808 | -0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene060929 | MS.gene92808 | 0.80211 | 6.55E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene92808 | -0.826645 | 2.42E-54 | -1.69E-46 |
| MS.gene061044 | MS.gene92808 | 0.812126 | 4.96E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56554 | MS.gene92808 | PPI |
| MS.gene96808 | MS.gene92808 | PPI |
| MS.gene40148 | MS.gene92808 | PPI |
| MS.gene031525 | MS.gene92808 | PPI |
| MS.gene40154 | MS.gene92808 | PPI |
| MS.gene006771 | MS.gene92808 | PPI |
| MS.gene92808 | MS.gene071398 | PPI |
| MS.gene028567 | MS.gene92808 | PPI |
| MS.gene071401 | MS.gene92808 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92808.t1 | MTR_7g074710 | 98.773 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 0.0 | 662 |
| MS.gene92808.t1 | MTR_7g074880 | 69.632 | 326 | 99 | 0 | 1 | 326 | 1 | 326 | 1.02e-174 | 487 |
| MS.gene92808.t1 | MTR_7g074850 | 67.173 | 329 | 105 | 1 | 1 | 326 | 1 | 329 | 8.76e-170 | 474 |
| MS.gene92808.t1 | MTR_7g074730 | 66.159 | 328 | 109 | 1 | 1 | 326 | 1 | 328 | 1.19e-166 | 467 |
| MS.gene92808.t1 | MTR_7g074820 | 65.957 | 329 | 109 | 1 | 1 | 326 | 1 | 329 | 7.49e-166 | 465 |
| MS.gene92808.t1 | MTR_7g074870 | 65.385 | 286 | 99 | 0 | 41 | 326 | 3 | 288 | 2.05e-140 | 399 |
| MS.gene92808.t1 | MTR_4g023730 | 48.328 | 329 | 167 | 3 | 1 | 326 | 1 | 329 | 9.73e-106 | 312 |
| MS.gene92808.t1 | MTR_1g022440 | 43.385 | 325 | 171 | 4 | 8 | 326 | 8 | 325 | 2.79e-94 | 283 |
| MS.gene92808.t1 | MTR_1g022445 | 44.000 | 325 | 169 | 4 | 8 | 326 | 8 | 325 | 4.38e-93 | 280 |
| MS.gene92808.t1 | MTR_4g092080 | 38.485 | 330 | 189 | 5 | 5 | 324 | 11 | 336 | 5.73e-75 | 234 |
| MS.gene92808.t1 | MTR_4g081440 | 35.000 | 340 | 195 | 7 | 6 | 326 | 22 | 354 | 4.64e-69 | 219 |
| MS.gene92808.t1 | MTR_4g081440 | 34.412 | 340 | 196 | 7 | 6 | 326 | 18 | 349 | 1.98e-68 | 218 |
| MS.gene92808.t1 | MTR_2g101330 | 38.957 | 326 | 183 | 8 | 7 | 326 | 4 | 319 | 4.87e-63 | 203 |
| MS.gene92808.t1 | MTR_8g062440 | 36.254 | 331 | 191 | 8 | 4 | 326 | 3 | 321 | 2.44e-59 | 193 |
| MS.gene92808.t1 | MTR_8g062440 | 35.650 | 331 | 194 | 7 | 4 | 326 | 3 | 322 | 5.33e-58 | 190 |
| MS.gene92808.t1 | MTR_8g062110 | 36.170 | 329 | 194 | 8 | 1 | 323 | 1 | 319 | 2.24e-57 | 188 |
| MS.gene92808.t1 | MTR_8g062110 | 36.170 | 329 | 194 | 8 | 1 | 323 | 10 | 328 | 2.63e-57 | 188 |
| MS.gene92808.t1 | MTR_8g062440 | 39.643 | 280 | 153 | 6 | 4 | 276 | 3 | 273 | 4.05e-57 | 187 |
| MS.gene92808.t1 | MTR_8g062110 | 38.929 | 280 | 161 | 5 | 1 | 276 | 1 | 274 | 9.89e-57 | 185 |
| MS.gene92808.t1 | MTR_4g077130 | 38.489 | 278 | 162 | 5 | 2 | 276 | 4 | 275 | 1.00e-56 | 187 |
| MS.gene92808.t1 | MTR_8g062110 | 38.929 | 280 | 161 | 5 | 1 | 276 | 1 | 274 | 1.06e-56 | 185 |
| MS.gene92808.t1 | MTR_5g056600 | 33.956 | 321 | 203 | 6 | 9 | 326 | 5 | 319 | 2.56e-54 | 180 |
| MS.gene92808.t1 | MTR_3g005210 | 36.765 | 272 | 164 | 4 | 8 | 276 | 6 | 272 | 5.74e-54 | 179 |
| MS.gene92808.t1 | MTR_2g013230 | 33.815 | 346 | 203 | 9 | 1 | 326 | 1 | 340 | 1.52e-53 | 179 |
| MS.gene92808.t1 | MTR_4g077100 | 36.429 | 280 | 169 | 5 | 1 | 276 | 3 | 277 | 1.67e-53 | 177 |
| MS.gene92808.t1 | MTR_4g077100 | 36.429 | 280 | 169 | 5 | 1 | 276 | 3 | 277 | 6.18e-53 | 177 |
| MS.gene92808.t1 | MTR_3g005170 | 37.132 | 272 | 163 | 5 | 8 | 276 | 10 | 276 | 9.41e-53 | 175 |
| MS.gene92808.t1 | MTR_3g005170 | 37.132 | 272 | 163 | 5 | 8 | 276 | 10 | 276 | 2.52e-52 | 175 |
| MS.gene92808.t1 | MTR_3g031650 | 33.851 | 322 | 203 | 7 | 8 | 326 | 5 | 319 | 3.26e-51 | 172 |
| MS.gene92808.t1 | MTR_5g072620 | 34.783 | 322 | 200 | 7 | 8 | 326 | 5 | 319 | 1.28e-48 | 166 |
| MS.gene92808.t1 | MTR_2g013250 | 31.195 | 343 | 208 | 7 | 3 | 324 | 2 | 337 | 5.91e-48 | 164 |
| MS.gene92808.t1 | MTR_3g031650 | 35.294 | 272 | 168 | 5 | 8 | 276 | 5 | 271 | 6.01e-46 | 157 |
| MS.gene92808.t1 | MTR_2g013260 | 31.792 | 346 | 206 | 11 | 1 | 324 | 1 | 338 | 8.93e-45 | 156 |
| MS.gene92808.t1 | MTR_7g117190 | 32.362 | 343 | 209 | 10 | 3 | 326 | 2 | 340 | 1.02e-44 | 156 |
| MS.gene92808.t1 | MTR_2g104960 | 34.056 | 323 | 196 | 13 | 8 | 326 | 20 | 329 | 1.16e-42 | 150 |
| MS.gene92808.t1 | MTR_4g009040 | 32.716 | 324 | 202 | 11 | 7 | 326 | 12 | 323 | 1.17e-42 | 150 |
| MS.gene92808.t1 | MTR_4g006940 | 32.515 | 326 | 205 | 11 | 4 | 326 | 13 | 326 | 1.43e-42 | 150 |
| MS.gene92808.t1 | MTR_4g009040 | 32.012 | 328 | 203 | 11 | 7 | 326 | 12 | 327 | 5.71e-41 | 145 |
| MS.gene92808.t1 | MTR_2g028620 | 32.219 | 329 | 201 | 11 | 8 | 326 | 10 | 326 | 2.34e-39 | 141 |
| MS.gene92808.t1 | MTR_4g006940 | 34.173 | 278 | 169 | 10 | 4 | 278 | 13 | 279 | 9.58e-39 | 139 |
| MS.gene92808.t1 | MTR_4g006940 | 34.173 | 278 | 169 | 10 | 4 | 278 | 13 | 279 | 9.58e-39 | 139 |
| MS.gene92808.t1 | MTR_7g117190 | 33.106 | 293 | 176 | 9 | 3 | 276 | 2 | 293 | 1.06e-38 | 139 |
| MS.gene92808.t1 | MTR_2g013260 | 32.881 | 295 | 177 | 7 | 1 | 276 | 1 | 293 | 5.53e-38 | 137 |
| MS.gene92808.t1 | MTR_4g009690 | 32.927 | 328 | 196 | 11 | 7 | 326 | 12 | 323 | 9.21e-38 | 137 |
| MS.gene92808.t1 | MTR_4g009690 | 32.817 | 323 | 202 | 10 | 7 | 326 | 12 | 322 | 1.49e-37 | 137 |
| MS.gene92808.t1 | MTR_3g005170 | 32.353 | 272 | 145 | 6 | 8 | 276 | 10 | 245 | 1.17e-36 | 133 |
| MS.gene92808.t1 | MTR_2g028620 | 33.453 | 278 | 167 | 8 | 8 | 276 | 10 | 278 | 4.21e-36 | 132 |
| MS.gene92808.t1 | MTR_2g013230 | 30.769 | 247 | 146 | 8 | 100 | 326 | 9 | 250 | 1.63e-24 | 100 |
| MS.gene92808.t1 | MTR_0164s0070 | 40.625 | 128 | 74 | 2 | 7 | 133 | 4 | 130 | 4.90e-24 | 97.8 |
| MS.gene92808.t1 | MTR_8g062110 | 32.143 | 224 | 138 | 6 | 105 | 323 | 19 | 233 | 1.78e-23 | 97.1 |
| MS.gene92808.t1 | MTR_8g062110 | 35.429 | 175 | 105 | 3 | 105 | 276 | 19 | 188 | 7.07e-23 | 94.4 |
| MS.gene92808.t1 | MTR_5g029990 | 26.866 | 268 | 172 | 6 | 8 | 270 | 12 | 260 | 7.69e-23 | 96.7 |
| MS.gene92808.t1 | MTR_6g406250 | 26.909 | 275 | 181 | 7 | 4 | 268 | 51 | 315 | 2.31e-20 | 90.9 |
| MS.gene92808.t1 | MTR_7g117190 | 31.169 | 231 | 137 | 9 | 115 | 326 | 3 | 230 | 3.31e-19 | 85.1 |
| MS.gene92808.t1 | MTR_7g074865 | 82.500 | 40 | 7 | 0 | 1 | 40 | 1 | 40 | 3.28e-18 | 78.2 |
| MS.gene92808.t1 | MTR_6g406250 | 28.910 | 211 | 135 | 5 | 4 | 206 | 51 | 254 | 3.89e-18 | 83.2 |
| MS.gene92808.t1 | MTR_3g101500 | 27.668 | 253 | 150 | 9 | 7 | 251 | 3 | 230 | 5.93e-16 | 77.4 |
| MS.gene92808.t1 | MTR_3g101500 | 27.668 | 253 | 150 | 9 | 7 | 251 | 3 | 230 | 6.29e-16 | 77.8 |
| MS.gene92808.t1 | MTR_2g013260 | 27.935 | 247 | 149 | 10 | 100 | 324 | 28 | 267 | 9.64e-16 | 76.6 |
| MS.gene92808.t1 | MTR_3g101500 | 28.421 | 190 | 116 | 6 | 7 | 196 | 3 | 172 | 2.37e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92808.t1 | AT2G45400 | 48.171 | 328 | 162 | 5 | 6 | 326 | 38 | 364 | 5.01e-103 | 306 |
| MS.gene92808.t1 | AT5G42800 | 43.675 | 332 | 174 | 5 | 1 | 326 | 1 | 325 | 8.86e-92 | 278 |
| MS.gene92808.t1 | AT2G45400 | 48.582 | 282 | 138 | 4 | 6 | 280 | 38 | 319 | 4.39e-89 | 270 |
| MS.gene92808.t1 | AT2G45400 | 47.241 | 290 | 146 | 4 | 43 | 326 | 19 | 307 | 1.27e-86 | 263 |
| MS.gene92808.t1 | AT1G61720 | 39.104 | 335 | 186 | 8 | 4 | 326 | 9 | 337 | 1.03e-77 | 241 |
| MS.gene92808.t1 | AT4G35420 | 41.818 | 330 | 179 | 8 | 1 | 326 | 1 | 321 | 8.29e-75 | 233 |
| MS.gene92808.t1 | AT2G45400 | 50.691 | 217 | 101 | 3 | 6 | 216 | 38 | 254 | 2.43e-69 | 217 |
| MS.gene92808.t1 | AT1G09510 | 37.730 | 326 | 193 | 6 | 1 | 323 | 1 | 319 | 9.06e-57 | 187 |
| MS.gene92808.t1 | AT2G02400 | 36.086 | 327 | 195 | 8 | 4 | 326 | 2 | 318 | 2.58e-56 | 185 |
| MS.gene92808.t1 | AT4G27250 | 31.875 | 320 | 201 | 5 | 9 | 317 | 14 | 327 | 1.39e-55 | 184 |
| MS.gene92808.t1 | AT1G09480 | 36.778 | 329 | 198 | 7 | 1 | 326 | 1 | 322 | 4.32e-54 | 180 |
| MS.gene92808.t1 | AT4G27250 | 31.098 | 328 | 203 | 5 | 9 | 317 | 14 | 337 | 4.41e-54 | 181 |
| MS.gene92808.t1 | AT1G51410 | 34.242 | 330 | 203 | 7 | 2 | 326 | 3 | 323 | 6.24e-54 | 179 |
| MS.gene92808.t1 | AT5G19440 | 35.061 | 328 | 198 | 7 | 4 | 325 | 5 | 323 | 1.05e-53 | 179 |
| MS.gene92808.t1 | AT1G09480 | 36.778 | 329 | 198 | 7 | 1 | 326 | 48 | 369 | 1.10e-53 | 180 |
| MS.gene92808.t1 | AT1G09490 | 36.170 | 329 | 200 | 7 | 1 | 326 | 1 | 322 | 1.11e-53 | 179 |
| MS.gene92808.t1 | AT1G66800 | 35.185 | 324 | 201 | 8 | 4 | 326 | 3 | 318 | 1.24e-53 | 178 |
| MS.gene92808.t1 | AT1G68540 | 34.472 | 322 | 200 | 7 | 10 | 326 | 6 | 321 | 3.87e-51 | 172 |
| MS.gene92808.t1 | AT5G58490 | 34.985 | 323 | 198 | 8 | 8 | 326 | 9 | 323 | 8.28e-51 | 171 |
| MS.gene92808.t1 | AT1G09500 | 36.786 | 280 | 168 | 5 | 1 | 276 | 1 | 275 | 1.45e-49 | 167 |
| MS.gene92808.t1 | AT1G25460 | 34.579 | 321 | 199 | 6 | 10 | 326 | 6 | 319 | 1.55e-49 | 168 |
| MS.gene92808.t1 | AT1G09500 | 36.491 | 285 | 172 | 5 | 1 | 281 | 1 | 280 | 4.47e-49 | 167 |
| MS.gene92808.t1 | AT2G33590 | 35.714 | 322 | 184 | 12 | 5 | 318 | 6 | 312 | 2.69e-44 | 154 |
| MS.gene92808.t1 | AT1G15950 | 34.268 | 321 | 198 | 9 | 8 | 326 | 13 | 322 | 9.00e-44 | 154 |
| MS.gene92808.t1 | AT1G15950 | 34.268 | 321 | 198 | 9 | 8 | 326 | 13 | 322 | 9.00e-44 | 154 |
| MS.gene92808.t1 | AT1G76470 | 33.333 | 315 | 203 | 5 | 5 | 317 | 4 | 313 | 3.59e-43 | 151 |
| MS.gene92808.t1 | AT1G80820 | 34.049 | 326 | 192 | 12 | 8 | 326 | 8 | 317 | 2.71e-42 | 149 |
| MS.gene92808.t1 | AT2G33600 | 36.646 | 322 | 181 | 11 | 5 | 318 | 6 | 312 | 3.99e-42 | 149 |
| MS.gene92808.t1 | AT1G15950 | 34.304 | 309 | 191 | 8 | 8 | 314 | 13 | 311 | 6.63e-42 | 148 |
| MS.gene92808.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 1.42e-38 | 138 |
| MS.gene92808.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 2.12e-38 | 138 |
| MS.gene92808.t1 | AT1G09490 | 33.559 | 295 | 187 | 6 | 35 | 326 | 3 | 291 | 2.22e-38 | 138 |
| MS.gene92808.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 2.59e-38 | 138 |
| MS.gene92808.t1 | AT1G80820 | 35.612 | 278 | 157 | 11 | 8 | 278 | 8 | 270 | 2.73e-37 | 134 |
| MS.gene92808.t1 | AT1G09500 | 34.855 | 241 | 149 | 5 | 40 | 276 | 5 | 241 | 3.40e-33 | 124 |
| MS.gene92808.t1 | AT5G14700 | 30.479 | 292 | 168 | 10 | 4 | 276 | 51 | 326 | 3.18e-25 | 104 |
| MS.gene92808.t1 | AT1G68540 | 31.050 | 219 | 142 | 5 | 112 | 326 | 1 | 214 | 1.49e-24 | 99.4 |
| MS.gene92808.t1 | AT2G23910 | 28.339 | 307 | 193 | 10 | 9 | 303 | 11 | 302 | 2.04e-24 | 101 |
| MS.gene92808.t1 | AT2G23910 | 28.044 | 271 | 177 | 8 | 9 | 272 | 11 | 270 | 9.91e-22 | 93.2 |
| MS.gene92808.t1 | AT2G23910 | 28.044 | 271 | 177 | 8 | 9 | 272 | 11 | 270 | 1.00e-21 | 93.2 |
| MS.gene92808.t1 | AT5G14700 | 32.195 | 205 | 120 | 6 | 4 | 196 | 51 | 248 | 5.73e-21 | 91.3 |
| MS.gene92808.t1 | AT4G30470 | 27.244 | 312 | 187 | 12 | 9 | 302 | 11 | 300 | 3.06e-19 | 87.0 |
| MS.gene92808.t1 | AT1G15950 | 30.357 | 224 | 149 | 5 | 105 | 326 | 6 | 224 | 3.92e-17 | 80.1 |
| MS.gene92808.t1 | AT2G23910 | 26.966 | 267 | 169 | 9 | 49 | 303 | 16 | 268 | 1.37e-15 | 75.9 |
| MS.gene92808.t1 | AT4G33360 | 27.778 | 252 | 151 | 9 | 7 | 251 | 2 | 229 | 4.17e-15 | 75.5 |
| MS.gene92808.t1 | AT4G33360 | 27.778 | 252 | 151 | 9 | 7 | 251 | 14 | 241 | 4.34e-15 | 75.1 |
| MS.gene92808.t1 | AT4G33360 | 27.778 | 252 | 151 | 9 | 7 | 251 | 14 | 241 | 5.48e-15 | 75.1 |
Find 62 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGATATTCTGGATATT+TGG | 0.178162 | 7.4:+30468013 | None:intergenic |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.206019 | 7.4:-30468575 | MS.gene92808:CDS |
| ACTGTTAGTATTTGATATTC+TGG | 0.207664 | 7.4:+30468005 | None:intergenic |
| CTTGAATTTGGTGAACAAAA+TGG | 0.220583 | 7.4:-30468563 | MS.gene92808:CDS |
| ACAAAACGACCAACAATAAA+AGG | 0.257121 | 7.4:+30468515 | None:intergenic |
| ATCAAGAGTCTCCTTGAAAA+TGG | 0.290608 | 7.4:-30469697 | MS.gene92808:CDS |
| GATGAGTTGAAGGAAATTAA+AGG | 0.307837 | 7.4:-30467981 | MS.gene92808:CDS |
| TATTGAGAAGGCTCTTGTTT+TGG | 0.324795 | 7.4:-30468471 | MS.gene92808:CDS |
| GGTTCTGCTGTTTCATTCAA+TGG | 0.327787 | 7.4:-30468701 | MS.gene92808:CDS |
| ATTGCTGCAGCGAAACTGTC+TGG | 0.328131 | 7.4:+30468884 | None:intergenic |
| AGTTTCTTCGTGTTTAAATC+TGG | 0.331608 | 7.4:+30467948 | None:intergenic |
| AGAACCGTCGATGGCGCATT+AGG | 0.342006 | 7.4:-30468782 | MS.gene92808:CDS |
| CTTAGAAGTGTTAAGCCATT+TGG | 0.344973 | 7.4:-30468629 | MS.gene92808:CDS |
| TTATGCTGTTTCTAAGACTT+TGG | 0.354833 | 7.4:-30468600 | MS.gene92808:CDS |
| AAAGGAAGAGTATGTGTAAC+TGG | 0.362480 | 7.4:-30469748 | MS.gene92808:CDS |
| TCAATAGAATCAGGAAGCTT+AGG | 0.377093 | 7.4:+30468488 | None:intergenic |
| TTGAATTTGGTGAACAAAAT+GGG | 0.381597 | 7.4:-30468562 | MS.gene92808:CDS |
| CTGCTTGAGAATTCTGTTCC+AGG | 0.394830 | 7.4:-30468098 | MS.gene92808:CDS |
| TGACATTAACAGAACGTAAG+AGG | 0.420276 | 7.4:-30468979 | MS.gene92808:intron |
| TCACTCACGGCGAAGTCAAT+TGG | 0.434477 | 7.4:+30468827 | None:intergenic |
| AGTTGAGACATCTCTTCAAT+AGG | 0.440279 | 7.4:+30468044 | None:intergenic |
| CAATAGAATCAGGAAGCTTA+GGG | 0.444039 | 7.4:+30468489 | None:intergenic |
| AGAGCCTTCTCAATAGAATC+AGG | 0.454202 | 7.4:+30468479 | None:intergenic |
| ACTAACAGTAGATGAGTTGA+AGG | 0.472358 | 7.4:-30467991 | MS.gene92808:CDS |
| ATGTGTTGGATGAGAGTGAT+TGG | 0.477053 | 7.4:-30468667 | MS.gene92808:CDS |
| ACTGTCTGGGTTGCTTAGAT+CGG | 0.487171 | 7.4:+30468898 | None:intergenic |
| ATGCACCGGGTAGATTTGTC+AGG | 0.495956 | 7.4:+30468945 | None:intergenic |
| ACAGCATAATTCCAACCAAA+TGG | 0.504930 | 7.4:+30468614 | None:intergenic |
| GTCCAAATGGCTGAAGGAAA+AGG | 0.516695 | 7.4:-30469766 | None:intergenic |
| TCTTCAATAGGTACAATGAA+TGG | 0.521628 | 7.4:+30468056 | None:intergenic |
| CAGCAATCAAAGGATGTGTC+GGG | 0.524506 | 7.4:-30468868 | MS.gene92808:CDS |
| GAGCAATTGTATCTACCTCC+TGG | 0.524842 | 7.4:+30468080 | None:intergenic |
| ATTCAATGTTGCAAGGAGAA+AGG | 0.530160 | 7.4:-30467870 | MS.gene92808:CDS |
| AGTATGTGTAACTGGAGGTA+CGG | 0.533565 | 7.4:-30469740 | MS.gene92808:CDS |
| ACCTGGATCAGCTCTAATAG+TGG | 0.533677 | 7.4:+30469660 | None:intergenic |
| GCTTCCTGATTCTATTGAGA+AGG | 0.537211 | 7.4:-30468483 | MS.gene92808:CDS |
| TTGCTGCAGCGAAACTGTCT+GGG | 0.539457 | 7.4:+30468885 | None:intergenic |
| ACGAAGAAACTCGTGGATGC+TGG | 0.539479 | 7.4:-30467936 | MS.gene92808:CDS |
| TATTTCTTCTGGTTCACTCA+CGG | 0.542470 | 7.4:+30468814 | None:intergenic |
| GAAGTGTTAAGCCATTTGGT+TGG | 0.545559 | 7.4:-30468625 | MS.gene92808:CDS |
| TGGAAAAGACAATGATGTGT+TGG | 0.554067 | 7.4:-30468681 | MS.gene92808:CDS |
| TGAAGGAAATTAAAGGTGCA+AGG | 0.554380 | 7.4:-30467974 | MS.gene92808:CDS |
| ACCACTATTAGAGCTGATCC+AGG | 0.558931 | 7.4:-30469661 | MS.gene92808:intron |
| GCAGCAATCAAAGGATGTGT+CGG | 0.561014 | 7.4:-30468869 | MS.gene92808:CDS |
| AATGCCTAATGCGCCATCGA+CGG | 0.565238 | 7.4:+30468778 | None:intergenic |
| GACATTAACAGAACGTAAGA+GGG | 0.566904 | 7.4:-30468978 | MS.gene92808:intron |
| TTTCCACATGGTACATGTTG+AGG | 0.569682 | 7.4:-30468144 | MS.gene92808:CDS |
| GTATGTGTAACTGGAGGTAC+GGG | 0.572789 | 7.4:-30469739 | MS.gene92808:CDS |
| CATGGTACATGTTGAGGATG+TGG | 0.574986 | 7.4:-30468138 | MS.gene92808:CDS |
| AGTTTCGCTGCAGCAATCAA+AGG | 0.584297 | 7.4:-30468878 | MS.gene92808:CDS |
| AAGAGTGTCCAAATGGCTGA+AGG | 0.588094 | 7.4:-30469772 | None:intergenic |
| AGGTTTATATACACTTCAAG+TGG | 0.594598 | 7.4:-30468722 | MS.gene92808:CDS |
| GGCGAAGTCAATTGGTGAAG+CGG | 0.597111 | 7.4:+30468835 | None:intergenic |
| TGGTGTGACACGTTTCCACA+TGG | 0.600639 | 7.4:-30468156 | MS.gene92808:CDS |
| TGAATTCAAAGACAGTGAAG+AGG | 0.602314 | 7.4:-30468742 | MS.gene92808:CDS |
| CGATGCAATTCAATGTTGCA+AGG | 0.602642 | 7.4:-30467877 | MS.gene92808:CDS |
| AGTCAATTGGTGAAGCGGTG+TGG | 0.629454 | 7.4:+30468840 | None:intergenic |
| AGCTTCCTGACAAATCTACC+CGG | 0.636776 | 7.4:-30468950 | MS.gene92808:CDS |
| TTTAAACACGAAGAAACTCG+TGG | 0.659776 | 7.4:-30467943 | MS.gene92808:CDS |
| CTTGAGAATTCTGTTCCAGG+AGG | 0.688166 | 7.4:-30468095 | MS.gene92808:CDS |
| GGAAGAGTATGTGTAACTGG+AGG | 0.698516 | 7.4:-30469745 | MS.gene92808:CDS |
| CATCCTCAACATGTACCATG+TGG | 0.710484 | 7.4:+30468141 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGAAAATATTAAAATAAAA+AGG | + | chr7.4:30467997-30468016 | None:intergenic | 10.0% |
| !!! | ATGTTTTTGAATTAAATTGA+TGG | + | chr7.4:30468575-30468594 | None:intergenic | 15.0% |
| !! | AATTAACTATATTGTGTGTT+TGG | - | chr7.4:30468033-30468052 | MS.gene92808:CDS | 20.0% |
| !! | GTATATAGAAACAACTATAA+AGG | + | chr7.4:30468167-30468186 | None:intergenic | 20.0% |
| !! | TATTTGATATTCTGGATATT+TGG | + | chr7.4:30469610-30469629 | None:intergenic | 20.0% |
| !! | TGAATTTGACAAGATTATAA+TGG | + | chr7.4:30468301-30468320 | None:intergenic | 20.0% |
| !!! | ACATCAATTTATTTTCACTT+AGG | + | chr7.4:30469424-30469443 | None:intergenic | 20.0% |
| ! | AAATTCACCGTAATTCTTAT+AGG | - | chr7.4:30468314-30468333 | MS.gene92808:intron | 25.0% |
| ! | AATTGTGGTAAAAACTTCTT+TGG | - | chr7.4:30468254-30468273 | MS.gene92808:intron | 25.0% |
| ! | ACTGTTAGTATTTGATATTC+TGG | + | chr7.4:30469618-30469637 | None:intergenic | 25.0% |
| ! | GAAAAAACATGAGTAGAATA+AGG | + | chr7.4:30469195-30469214 | None:intergenic | 25.0% |
| ! | GGAAATTATAAGCATTTGTT+TGG | + | chr7.4:30468613-30468632 | None:intergenic | 25.0% |
| ! | TCTGTTAATGTCAAAAACAT+AGG | + | chr7.4:30468634-30468653 | None:intergenic | 25.0% |
| !! | AGAAGTTTTTACCACAATTA+CGG | + | chr7.4:30468253-30468272 | None:intergenic | 25.0% |
| !! | GTCAATTTAAAACCTAAACT+CGG | - | chr7.4:30469336-30469355 | MS.gene92808:intron | 25.0% |
| !! | TTGAATTTGGTGAACAAAAT+GGG | - | chr7.4:30469058-30469077 | MS.gene92808:intron | 25.0% |
| !! | TTGATTCTTCCTTTTATTGT+TGG | - | chr7.4:30469096-30469115 | MS.gene92808:intron | 25.0% |
| !!! | AATGGTTATTAGTCTTGATT+TGG | - | chr7.4:30468132-30468151 | MS.gene92808:CDS | 25.0% |
| !!! | ATGGTTATTAGTCTTGATTT+GGG | - | chr7.4:30468133-30468152 | MS.gene92808:CDS | 25.0% |
| !!! | TTTTTGGCCTATAAGAATTA+CGG | + | chr7.4:30468324-30468343 | None:intergenic | 25.0% |
| AAAAGGGTAATAAATTCACC+TGG | + | chr7.4:30467980-30467999 | None:intergenic | 30.0% | |
| ACAAAACGACCAACAATAAA+AGG | + | chr7.4:30469108-30469127 | None:intergenic | 30.0% | |
| AGGTTTATATACACTTCAAG+TGG | - | chr7.4:30468898-30468917 | MS.gene92808:CDS | 30.0% | |
| AGTTTCTTCGTGTTTAAATC+TGG | + | chr7.4:30469675-30469694 | None:intergenic | 30.0% | |
| CATATACAATTAGAGTCGTT+GGG | + | chr7.4:30469383-30469402 | None:intergenic | 30.0% | |
| GTGAAAATAAATTGATGTGC+AGG | - | chr7.4:30469426-30469445 | MS.gene92808:intron | 30.0% | |
| TCTTCAATAGGTACAATGAA+TGG | + | chr7.4:30469567-30469586 | None:intergenic | 30.0% | |
| TTCACAAATAGAGTAAAACC+TGG | + | chr7.4:30468114-30468133 | None:intergenic | 30.0% | |
| ! | ATGAGATCGTTGATAAAGAT+TGG | - | chr7.4:30469288-30469307 | MS.gene92808:intron | 30.0% |
| ! | CTTGAATTTGGTGAACAAAA+TGG | - | chr7.4:30469057-30469076 | MS.gene92808:intron | 30.0% |
| ! | GATGAGTTGAAGGAAATTAA+AGG | - | chr7.4:30469639-30469658 | MS.gene92808:intron | 30.0% |
| ! | GGTTTTACTCTATTTGTGAA+TGG | - | chr7.4:30468114-30468133 | MS.gene92808:CDS | 30.0% |
| ! | GTTGAAGAAATGTAGCTTTT+CGG | + | chr7.4:30468701-30468720 | None:intergenic | 30.0% |
| ! | TTCCAAGTCGATAAACTTTT+TGG | + | chr7.4:30468340-30468359 | None:intergenic | 30.0% |
| !! | CTTTTTGTCACTATTTCTTC+TGG | + | chr7.4:30468820-30468839 | None:intergenic | 30.0% |
| !! | TATATTGTGTGTTTGGTTTG+TGG | - | chr7.4:30468040-30468059 | MS.gene92808:CDS | 30.0% |
| !! | TTATGCTGTTTCTAAGACTT+TGG | - | chr7.4:30469020-30469039 | MS.gene92808:intron | 30.0% |
| !!! | CATTTTTGTTTAACTTGACC+AGG | - | chr7.4:30468093-30468112 | MS.gene92808:CDS | 30.0% |
| AACGTTCATATTCCGAGTTT+AGG | + | chr7.4:30469351-30469370 | None:intergenic | 35.0% | |
| ACAGCATAATTCCAACCAAA+TGG | + | chr7.4:30469009-30469028 | None:intergenic | 35.0% | |
| AGTTGAGACATCTCTTCAAT+AGG | + | chr7.4:30469579-30469598 | None:intergenic | 35.0% | |
| ATCAAGAGTCTCCTTGAAAA+TGG | - | chr7.4:30467923-30467942 | MS.gene92808:CDS | 35.0% | |
| ATTCAATGTTGCAAGGAGAA+AGG | - | chr7.4:30469750-30469769 | MS.gene92808:CDS | 35.0% | |
| CAATAGAATCAGGAAGCTTA+GGG | + | chr7.4:30469134-30469153 | None:intergenic | 35.0% | |
| CAGTTTCTCTAGCCTAAAAT+CGG | + | chr7.4:30468451-30468470 | None:intergenic | 35.0% | |
| CTCGTATATATCTGAGTTCA+CGG | - | chr7.4:30468199-30468218 | MS.gene92808:intron | 35.0% | |
| GACATTAACAGAACGTAAGA+GGG | - | chr7.4:30468642-30468661 | MS.gene92808:CDS | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.4:30469045-30469064 | MS.gene92808:intron | 35.0% | |
| GCAGGCAAAAAAGAACAAAT+TGG | - | chr7.4:30469444-30469463 | MS.gene92808:intron | 35.0% | |
| GCATATACAATTAGAGTCGT+TGG | + | chr7.4:30469384-30469403 | None:intergenic | 35.0% | |
| TAGAGAAACTGCAAAGGATT+TGG | - | chr7.4:30468460-30468479 | MS.gene92808:intron | 35.0% | |
| TCAATAGAATCAGGAAGCTT+AGG | + | chr7.4:30469135-30469154 | None:intergenic | 35.0% | |
| TGAATTCAAAGACAGTGAAG+AGG | - | chr7.4:30468878-30468897 | MS.gene92808:CDS | 35.0% | |
| TGACATTAACAGAACGTAAG+AGG | - | chr7.4:30468641-30468660 | MS.gene92808:CDS | 35.0% | |
| TGGAAAAGACAATGATGTGT+TGG | - | chr7.4:30468939-30468958 | MS.gene92808:CDS | 35.0% | |
| TTTAAACACGAAGAAACTCG+TGG | - | chr7.4:30469677-30469696 | MS.gene92808:CDS | 35.0% | |
| ! | AAAGGAAGAGTATGTGTAAC+TGG | - | chr7.4:30467872-30467891 | MS.gene92808:CDS | 35.0% |
| ! | ACTAACAGTAGATGAGTTGA+AGG | - | chr7.4:30469629-30469648 | MS.gene92808:intron | 35.0% |
| ! | TGAAGGAAATTAAAGGTGCA+AGG | - | chr7.4:30469646-30469665 | MS.gene92808:intron | 35.0% |
| !! | CTTAGAAGTGTTAAGCCATT+TGG | - | chr7.4:30468991-30469010 | MS.gene92808:intron | 35.0% |
| !! | GTGTTTGGTTTGTGGAATAT+GGG | - | chr7.4:30468048-30468067 | MS.gene92808:CDS | 35.0% |
| !! | TATTGAGAAGGCTCTTGTTT+TGG | - | chr7.4:30469149-30469168 | MS.gene92808:intron | 35.0% |
| !! | TATTTCTTCTGGTTCACTCA+CGG | + | chr7.4:30468809-30468828 | None:intergenic | 35.0% |
| !! | TGACAGAGTATCCATTTTCA+AGG | + | chr7.4:30467937-30467956 | None:intergenic | 35.0% |
| !! | TGTGTTTGGTTTGTGGAATA+TGG | - | chr7.4:30468047-30468066 | MS.gene92808:CDS | 35.0% |
| !!! | AAGGCTCTTGTTTTGGTATT+AGG | - | chr7.4:30469156-30469175 | MS.gene92808:intron | 35.0% |
| AGAGCCTTCTCAATAGAATC+AGG | + | chr7.4:30469144-30469163 | None:intergenic | 40.0% | |
| AGTATGTGTAACTGGAGGTA+CGG | - | chr7.4:30467880-30467899 | MS.gene92808:CDS | 40.0% | |
| ATGTGTTGGATGAGAGTGAT+TGG | - | chr7.4:30468953-30468972 | MS.gene92808:CDS | 40.0% | |
| CGATGCAATTCAATGTTGCA+AGG | - | chr7.4:30469743-30469762 | MS.gene92808:CDS | 40.0% | |
| GATATATACGAGTCACTCGA+CGG | + | chr7.4:30468191-30468210 | None:intergenic | 40.0% | |
| GCTTCCTGATTCTATTGAGA+AGG | - | chr7.4:30469137-30469156 | MS.gene92808:intron | 40.0% | |
| TTAGGCTAGAGAAACTGCAA+AGG | - | chr7.4:30468454-30468473 | MS.gene92808:intron | 40.0% | |
| TTTCCACATGGTACATGTTG+AGG | - | chr7.4:30469476-30469495 | MS.gene92808:intron | 40.0% | |
| ! | GAAGTGTTAAGCCATTTGGT+TGG | - | chr7.4:30468995-30469014 | MS.gene92808:intron | 40.0% |
| ! | GGCCAAAAAGTTTATCGACT+TGG | - | chr7.4:30468335-30468354 | MS.gene92808:intron | 40.0% |
| !! | CGACTTAGATTTAGCTTGAG+AGG | + | chr7.4:30468372-30468391 | None:intergenic | 40.0% |
| !! | GGTTCTGCTGTTTCATTCAA+TGG | - | chr7.4:30468919-30468938 | MS.gene92808:CDS | 40.0% |
| !! | TGAATCCATCGACCGATTTT+AGG | - | chr7.4:30468436-30468455 | MS.gene92808:intron | 40.0% |
| ACCACTATTAGAGCTGATCC+AGG | - | chr7.4:30467959-30467978 | MS.gene92808:CDS | 45.0% | |
| ACTGTCTGGGTTGCTTAGAT+CGG | + | chr7.4:30468725-30468744 | None:intergenic | 45.0% | |
| AGCTTCCTGACAAATCTACC+CGG | - | chr7.4:30468670-30468689 | MS.gene92808:CDS | 45.0% | |
| AGTTTCGCTGCAGCAATCAA+AGG | - | chr7.4:30468742-30468761 | MS.gene92808:CDS | 45.0% | |
| CAGCAATCAAAGGATGTGTC+GGG | - | chr7.4:30468752-30468771 | MS.gene92808:CDS | 45.0% | |
| CATCCTCAACATGTACCATG+TGG | + | chr7.4:30469482-30469501 | None:intergenic | 45.0% | |
| CATGGTACATGTTGAGGATG+TGG | - | chr7.4:30469482-30469501 | MS.gene92808:intron | 45.0% | |
| CTGCTTGAGAATTCTGTTCC+AGG | - | chr7.4:30469522-30469541 | MS.gene92808:intron | 45.0% | |
| CTTGAGAATTCTGTTCCAGG+AGG | - | chr7.4:30469525-30469544 | MS.gene92808:intron | 45.0% | |
| GAGCAATTGTATCTACCTCC+TGG | + | chr7.4:30469543-30469562 | None:intergenic | 45.0% | |
| GCAGCAATCAAAGGATGTGT+CGG | - | chr7.4:30468751-30468770 | MS.gene92808:CDS | 45.0% | |
| GTGACAAAAAGAACCGTCGA+TGG | - | chr7.4:30468829-30468848 | MS.gene92808:CDS | 45.0% | |
| TCTAGCCTAAAATCGGTCGA+TGG | + | chr7.4:30468444-30468463 | None:intergenic | 45.0% | |
| ! | ACCTGGATCAGCTCTAATAG+TGG | + | chr7.4:30467963-30467982 | None:intergenic | 45.0% |
| ! | ATGTAGCTTTTCGGATGCAC+CGG | + | chr7.4:30468692-30468711 | None:intergenic | 45.0% |
| ! | GGAAGAGTATGTGTAACTGG+AGG | - | chr7.4:30467875-30467894 | MS.gene92808:CDS | 45.0% |
| ! | GTACGGGTTTTCTTGGTTCA+TGG | - | chr7.4:30467897-30467916 | MS.gene92808:CDS | 45.0% |
| ! | GTATGTGTAACTGGAGGTAC+GGG | - | chr7.4:30467881-30467900 | MS.gene92808:CDS | 45.0% |
| !! | TGAAAATATTAAAATAAAAA+GGG | + | chr7.4:30467996-30468015 | None:intergenic | 5.0% |
| AATGCCTAATGCGCCATCGA+CGG | + | chr7.4:30468845-30468864 | None:intergenic | 50.0% | |
| ACCACAATTACGGTGACACG+TGG | + | chr7.4:30468243-30468262 | None:intergenic | 50.0% | |
| ACCACGTGTCACCGTAATTG+TGG | - | chr7.4:30468239-30468258 | MS.gene92808:intron | 50.0% | |
| ACGAAGAAACTCGTGGATGC+TGG | - | chr7.4:30469684-30469703 | MS.gene92808:CDS | 50.0% | |
| AGTCAATTGGTGAAGCGGTG+TGG | + | chr7.4:30468783-30468802 | None:intergenic | 50.0% | |
| ATGCACCGGGTAGATTTGTC+AGG | + | chr7.4:30468678-30468697 | None:intergenic | 50.0% | |
| ATTGCTGCAGCGAAACTGTC+TGG | + | chr7.4:30468739-30468758 | None:intergenic | 50.0% | |
| GGCGAAGTCAATTGGTGAAG+CGG | + | chr7.4:30468788-30468807 | None:intergenic | 50.0% | |
| TCACTCACGGCGAAGTCAAT+TGG | + | chr7.4:30468796-30468815 | None:intergenic | 50.0% | |
| TGGTGTGACACGTTTCCACA+TGG | - | chr7.4:30469464-30469483 | MS.gene92808:intron | 50.0% | |
| TTGCTGCAGCGAAACTGTCT+GGG | + | chr7.4:30468738-30468757 | None:intergenic | 50.0% | |
| ! | TGTAGCTTTTCGGATGCACC+GGG | + | chr7.4:30468691-30468710 | None:intergenic | 50.0% |
| !! | ACTGGAGGTACGGGTTTTCT+TGG | - | chr7.4:30467890-30467909 | MS.gene92808:CDS | 50.0% |
| AGAACCGTCGATGGCGCATT+AGG | - | chr7.4:30468838-30468857 | MS.gene92808:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30467860 | 30469782 | 30467860 | ID=MS.gene92808 |
| chr7.4 | mRNA | 30467860 | 30469782 | 30467860 | ID=MS.gene92808.t1;Parent=MS.gene92808 |
| chr7.4 | exon | 30469662 | 30469782 | 30469662 | ID=MS.gene92808.t1.exon1;Parent=MS.gene92808.t1 |
| chr7.4 | CDS | 30469662 | 30469782 | 30469662 | ID=cds.MS.gene92808.t1;Parent=MS.gene92808.t1 |
| chr7.4 | exon | 30468465 | 30468989 | 30468465 | ID=MS.gene92808.t1.exon2;Parent=MS.gene92808.t1 |
| chr7.4 | CDS | 30468465 | 30468989 | 30468465 | ID=cds.MS.gene92808.t1;Parent=MS.gene92808.t1 |
| chr7.4 | exon | 30467860 | 30468194 | 30467860 | ID=MS.gene92808.t1.exon3;Parent=MS.gene92808.t1 |
| chr7.4 | CDS | 30467860 | 30468194 | 30467860 | ID=cds.MS.gene92808.t1;Parent=MS.gene92808.t1 |
| Gene Sequence |
| Protein sequence |
