Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27550.t1 | Q40316.1 | 99.4 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 7.10E-185 | 656.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27550.t1 | Q40316 | 99.4 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 1.7e-187 | 656.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27550.t1 | A2Q3W4 | 99.4 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 8.7e-185 | 655.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049148 | MS.gene27550 | 0.811545 | 6.64E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene27550 | -0.824215 | 9.11E-54 | -1.69E-46 |
| MS.gene049259 | MS.gene27550 | 0.830187 | 3.38E-55 | -1.69E-46 |
| MS.gene049483 | MS.gene27550 | 0.810939 | 8.98E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene27550 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene049634 | MS.gene27550 | 0.822482 | 2.31E-53 | -1.69E-46 |
| MS.gene049710 | MS.gene27550 | 0.80398 | 2.69E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene27550 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene050082 | MS.gene27550 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene05015 | MS.gene27550 | 0.817845 | 2.67E-52 | -1.69E-46 |
| MS.gene050173 | MS.gene27550 | 0.803346 | 3.64E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene27550 | -0.843387 | 1.45E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene27550 | -0.816126 | 6.49E-52 | -1.69E-46 |
| MS.gene050380 | MS.gene27550 | 0.811056 | 8.47E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene27550 | 0.871762 | 5.34E-67 | -1.69E-46 |
| MS.gene050496 | MS.gene27550 | -0.809291 | 2.03E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene27550 | -0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene27550 | -0.833237 | 5.99E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene27550 | -0.830762 | 2.45E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene27550 | -0.832089 | 1.15E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene27550 | 0.881565 | 2.16E-70 | -1.69E-46 |
| MS.gene050986 | MS.gene27550 | -0.801918 | 7.18E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene27550 | 0.829773 | 4.27E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene27550 | 0.82741 | 1.59E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene27550 | 0.891584 | 3.48E-74 | -1.69E-46 |
| MS.gene051138 | MS.gene27550 | 0.85357 | 2.19E-61 | -1.69E-46 |
| MS.gene051268 | MS.gene27550 | -0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene27550 | 0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene051410 | MS.gene27550 | 0.846521 | 2.06E-59 | -1.69E-46 |
| MS.gene05141 | MS.gene27550 | 0.829647 | 4.58E-55 | -1.69E-46 |
| MS.gene051863 | MS.gene27550 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene27550 | 0.853749 | 1.94E-61 | -1.69E-46 |
| MS.gene052486 | MS.gene27550 | -0.806247 | 9.02E-50 | -1.69E-46 |
| MS.gene052566 | MS.gene27550 | 0.808086 | 3.68E-50 | -1.69E-46 |
| MS.gene052802 | MS.gene27550 | 0.831778 | 1.38E-55 | -1.69E-46 |
| MS.gene053069 | MS.gene27550 | 0.822501 | 2.29E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene27550 | 0.868165 | 7.99E-66 | -1.69E-46 |
| MS.gene053488 | MS.gene27550 | 0.834666 | 2.63E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene27550 | 0.86187 | 7.57E-64 | -1.69E-46 |
| MS.gene053826 | MS.gene27550 | 0.825372 | 4.86E-54 | -1.69E-46 |
| MS.gene053887 | MS.gene27550 | 0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene054054 | MS.gene27550 | 0.836191 | 1.08E-56 | -1.69E-46 |
| MS.gene054056 | MS.gene27550 | 0.803304 | 3.72E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene27550 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene27550 | 0.837202 | 5.97E-57 | -1.69E-46 |
| MS.gene055124 | MS.gene27550 | 0.884955 | 1.23E-71 | -1.69E-46 |
| MS.gene055139 | MS.gene27550 | 0.836034 | 1.19E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene27550 | 0.852694 | 3.90E-61 | -1.69E-46 |
| MS.gene055202 | MS.gene27550 | 0.870613 | 1.28E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene27550 | -0.814408 | 1.56E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene27550 | -0.806622 | 7.52E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene27550 | 0.828774 | 7.46E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene27550 | 0.826818 | 2.20E-54 | -1.69E-46 |
| MS.gene056310 | MS.gene27550 | 0.854285 | 1.36E-61 | -1.69E-46 |
| MS.gene056311 | MS.gene27550 | 0.874873 | 4.80E-68 | -1.69E-46 |
| MS.gene056313 | MS.gene27550 | 0.867088 | 1.77E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene27550 | -0.834807 | 2.42E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene27550 | -0.804494 | 2.10E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene27550 | 0.817691 | 2.89E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene27550 | 0.852487 | 4.47E-61 | -1.69E-46 |
| MS.gene057473 | MS.gene27550 | 0.812013 | 5.25E-51 | -1.69E-46 |
| MS.gene057549 | MS.gene27550 | 0.812006 | 5.27E-51 | -1.69E-46 |
| MS.gene057768 | MS.gene27550 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene058041 | MS.gene27550 | -0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene058068 | MS.gene27550 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene058093 | MS.gene27550 | 0.835669 | 1.47E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene27550 | 0.869981 | 2.06E-66 | -1.69E-46 |
| MS.gene058108 | MS.gene27550 | 0.890118 | 1.32E-73 | -1.69E-46 |
| MS.gene058109 | MS.gene27550 | 0.893168 | 8.08E-75 | -1.69E-46 |
| MS.gene058111 | MS.gene27550 | 0.901514 | 2.48E-78 | -1.69E-46 |
| MS.gene058117 | MS.gene27550 | 0.828346 | 9.46E-55 | -1.69E-46 |
| MS.gene058157 | MS.gene27550 | -0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene058170 | MS.gene27550 | 0.800059 | 1.72E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene27550 | 0.946042 | 9.80E-105 | -1.69E-46 |
| MS.gene058173 | MS.gene27550 | 0.950794 | 7.87E-109 | -1.69E-46 |
| MS.gene058175 | MS.gene27550 | 0.95076 | 8.45E-109 | -1.69E-46 |
| MS.gene058176 | MS.gene27550 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene058179 | MS.gene27550 | 0.838801 | 2.32E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene27550 | 0.827257 | 1.73E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene27550 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene27550 | -0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene058493 | MS.gene27550 | 0.853608 | 2.14E-61 | -1.69E-46 |
| MS.gene058494 | MS.gene27550 | 0.847478 | 1.13E-59 | -1.69E-46 |
| MS.gene058496 | MS.gene27550 | 0.801044 | 1.08E-48 | -1.69E-46 |
| MS.gene058628 | MS.gene27550 | 0.82336 | 1.44E-53 | -1.69E-46 |
| MS.gene058629 | MS.gene27550 | 0.800165 | 1.64E-48 | -1.69E-46 |
| MS.gene058630 | MS.gene27550 | 0.824363 | 8.41E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene27550 | 0.800499 | 1.40E-48 | -1.69E-46 |
| MS.gene05884 | MS.gene27550 | 0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene27550 | -0.814261 | 1.69E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene27550 | 0.854722 | 1.02E-61 | -1.69E-46 |
| MS.gene059038 | MS.gene27550 | 0.818661 | 1.75E-52 | -1.69E-46 |
| MS.gene059044 | MS.gene27550 | 0.815763 | 7.83E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene27550 | 0.878671 | 2.32E-69 | -1.69E-46 |
| MS.gene059223 | MS.gene27550 | 0.836916 | 7.07E-57 | -1.69E-46 |
| MS.gene059690 | MS.gene27550 | 0.836879 | 7.22E-57 | -1.69E-46 |
| MS.gene059694 | MS.gene27550 | 0.830336 | 3.11E-55 | -1.69E-46 |
| MS.gene059697 | MS.gene27550 | 0.830062 | 3.63E-55 | -1.69E-46 |
| MS.gene059703 | MS.gene27550 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene27550 | -0.841067 | 5.95E-58 | -1.69E-46 |
| MS.gene059916 | MS.gene27550 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene059943 | MS.gene27550 | 0.819767 | 9.77E-53 | -1.69E-46 |
| MS.gene060187 | MS.gene27550 | 0.826474 | 2.66E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene27550 | 0.820524 | 6.55E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene27550 | -0.820086 | 8.26E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene27550 | -0.818775 | 1.64E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene27550 | 0.800921 | 1.15E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028567 | MS.gene27550 | PPI |
| MS.gene071401 | MS.gene27550 | PPI |
| MS.gene56554 | MS.gene27550 | PPI |
| MS.gene96808 | MS.gene27550 | PPI |
| MS.gene40148 | MS.gene27550 | PPI |
| MS.gene27550 | MS.gene071398 | PPI |
| MS.gene031525 | MS.gene27550 | PPI |
| MS.gene40154 | MS.gene27550 | PPI |
| MS.gene006771 | MS.gene27550 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27550.t1 | MTR_7g074710 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 665 |
| MS.gene27550.t1 | MTR_7g074880 | 70.245 | 326 | 97 | 0 | 1 | 326 | 1 | 326 | 4.94e-176 | 490 |
| MS.gene27550.t1 | MTR_7g074850 | 67.781 | 329 | 103 | 1 | 1 | 326 | 1 | 329 | 3.28e-171 | 478 |
| MS.gene27550.t1 | MTR_7g074730 | 66.768 | 328 | 107 | 1 | 1 | 326 | 1 | 328 | 5.91e-168 | 470 |
| MS.gene27550.t1 | MTR_7g074820 | 66.565 | 329 | 107 | 1 | 1 | 326 | 1 | 329 | 2.38e-167 | 468 |
| MS.gene27550.t1 | MTR_7g074870 | 66.084 | 286 | 97 | 0 | 41 | 326 | 3 | 288 | 9.36e-142 | 402 |
| MS.gene27550.t1 | MTR_4g023730 | 48.632 | 329 | 166 | 3 | 1 | 326 | 1 | 329 | 1.72e-106 | 314 |
| MS.gene27550.t1 | MTR_1g022440 | 43.385 | 325 | 171 | 4 | 8 | 326 | 8 | 325 | 2.32e-94 | 283 |
| MS.gene27550.t1 | MTR_1g022445 | 44.000 | 325 | 169 | 4 | 8 | 326 | 8 | 325 | 3.06e-93 | 281 |
| MS.gene27550.t1 | MTR_4g092080 | 38.182 | 330 | 190 | 5 | 5 | 324 | 11 | 336 | 1.52e-74 | 233 |
| MS.gene27550.t1 | MTR_4g081440 | 34.412 | 340 | 197 | 7 | 6 | 326 | 22 | 354 | 4.75e-68 | 217 |
| MS.gene27550.t1 | MTR_4g081440 | 33.824 | 340 | 198 | 7 | 6 | 326 | 18 | 349 | 2.38e-67 | 215 |
| MS.gene27550.t1 | MTR_2g101330 | 39.264 | 326 | 182 | 8 | 7 | 326 | 4 | 319 | 1.15e-63 | 205 |
| MS.gene27550.t1 | MTR_8g062440 | 36.556 | 331 | 190 | 8 | 4 | 326 | 3 | 321 | 8.70e-60 | 194 |
| MS.gene27550.t1 | MTR_8g062440 | 35.952 | 331 | 193 | 7 | 4 | 326 | 3 | 322 | 1.77e-58 | 191 |
| MS.gene27550.t1 | MTR_8g062110 | 36.474 | 329 | 193 | 8 | 1 | 323 | 1 | 319 | 8.46e-58 | 189 |
| MS.gene27550.t1 | MTR_8g062110 | 36.474 | 329 | 193 | 8 | 1 | 323 | 10 | 328 | 8.72e-58 | 189 |
| MS.gene27550.t1 | MTR_8g062440 | 40.000 | 280 | 152 | 6 | 4 | 276 | 3 | 273 | 1.72e-57 | 189 |
| MS.gene27550.t1 | MTR_8g062110 | 39.286 | 280 | 160 | 5 | 1 | 276 | 1 | 274 | 3.58e-57 | 187 |
| MS.gene27550.t1 | MTR_8g062110 | 39.286 | 280 | 160 | 5 | 1 | 276 | 1 | 274 | 3.60e-57 | 186 |
| MS.gene27550.t1 | MTR_4g077130 | 38.489 | 278 | 162 | 5 | 2 | 276 | 4 | 275 | 1.52e-56 | 186 |
| MS.gene27550.t1 | MTR_5g056600 | 34.268 | 321 | 202 | 6 | 9 | 326 | 5 | 319 | 5.72e-55 | 182 |
| MS.gene27550.t1 | MTR_2g013230 | 34.104 | 346 | 202 | 9 | 1 | 326 | 1 | 340 | 2.38e-54 | 181 |
| MS.gene27550.t1 | MTR_3g005210 | 36.765 | 272 | 164 | 4 | 8 | 276 | 6 | 272 | 7.03e-54 | 179 |
| MS.gene27550.t1 | MTR_4g077100 | 36.429 | 280 | 169 | 5 | 1 | 276 | 3 | 277 | 2.59e-53 | 176 |
| MS.gene27550.t1 | MTR_4g077100 | 36.429 | 280 | 169 | 5 | 1 | 276 | 3 | 277 | 8.60e-53 | 176 |
| MS.gene27550.t1 | MTR_3g005170 | 37.132 | 272 | 163 | 5 | 8 | 276 | 10 | 276 | 1.30e-52 | 174 |
| MS.gene27550.t1 | MTR_3g005170 | 37.132 | 272 | 163 | 5 | 8 | 276 | 10 | 276 | 3.25e-52 | 175 |
| MS.gene27550.t1 | MTR_3g031650 | 33.540 | 322 | 204 | 7 | 8 | 326 | 5 | 319 | 1.79e-50 | 170 |
| MS.gene27550.t1 | MTR_2g013250 | 31.487 | 343 | 207 | 7 | 3 | 324 | 2 | 337 | 1.00e-48 | 166 |
| MS.gene27550.t1 | MTR_5g072620 | 34.783 | 322 | 200 | 7 | 8 | 326 | 5 | 319 | 2.06e-48 | 165 |
| MS.gene27550.t1 | MTR_2g013260 | 32.849 | 344 | 205 | 9 | 1 | 324 | 1 | 338 | 2.04e-45 | 158 |
| MS.gene27550.t1 | MTR_3g031650 | 34.926 | 272 | 169 | 5 | 8 | 276 | 5 | 271 | 3.24e-45 | 155 |
| MS.gene27550.t1 | MTR_7g117190 | 32.362 | 343 | 209 | 10 | 3 | 326 | 2 | 340 | 9.08e-45 | 156 |
| MS.gene27550.t1 | MTR_4g006940 | 32.515 | 326 | 205 | 11 | 4 | 326 | 13 | 326 | 1.77e-42 | 150 |
| MS.gene27550.t1 | MTR_2g104960 | 34.056 | 323 | 196 | 13 | 8 | 326 | 20 | 329 | 1.92e-42 | 150 |
| MS.gene27550.t1 | MTR_4g009040 | 32.716 | 324 | 202 | 11 | 7 | 326 | 12 | 323 | 2.16e-42 | 149 |
| MS.gene27550.t1 | MTR_4g009040 | 32.012 | 328 | 203 | 11 | 7 | 326 | 12 | 327 | 1.03e-40 | 145 |
| MS.gene27550.t1 | MTR_2g028620 | 32.219 | 329 | 201 | 11 | 8 | 326 | 10 | 326 | 3.31e-39 | 141 |
| MS.gene27550.t1 | MTR_7g117190 | 33.106 | 293 | 176 | 9 | 3 | 276 | 2 | 293 | 8.49e-39 | 139 |
| MS.gene27550.t1 | MTR_2g013260 | 33.220 | 295 | 176 | 7 | 1 | 276 | 1 | 293 | 1.10e-38 | 139 |
| MS.gene27550.t1 | MTR_4g006940 | 34.173 | 278 | 169 | 10 | 4 | 278 | 13 | 279 | 1.43e-38 | 138 |
| MS.gene27550.t1 | MTR_4g006940 | 34.173 | 278 | 169 | 10 | 4 | 278 | 13 | 279 | 1.43e-38 | 138 |
| MS.gene27550.t1 | MTR_4g009690 | 32.927 | 328 | 196 | 11 | 7 | 326 | 12 | 323 | 1.54e-37 | 137 |
| MS.gene27550.t1 | MTR_4g009690 | 32.817 | 323 | 202 | 10 | 7 | 326 | 12 | 322 | 2.46e-37 | 136 |
| MS.gene27550.t1 | MTR_3g005170 | 32.353 | 272 | 145 | 6 | 8 | 276 | 10 | 245 | 1.96e-36 | 133 |
| MS.gene27550.t1 | MTR_2g028620 | 33.453 | 278 | 167 | 8 | 8 | 276 | 10 | 278 | 5.82e-36 | 132 |
| MS.gene27550.t1 | MTR_2g013230 | 31.174 | 247 | 145 | 8 | 100 | 326 | 9 | 250 | 3.88e-25 | 102 |
| MS.gene27550.t1 | MTR_0164s0070 | 40.625 | 128 | 74 | 2 | 7 | 133 | 4 | 130 | 4.95e-24 | 97.8 |
| MS.gene27550.t1 | MTR_8g062110 | 32.143 | 224 | 138 | 6 | 105 | 323 | 19 | 233 | 2.60e-23 | 96.7 |
| MS.gene27550.t1 | MTR_8g062110 | 35.429 | 175 | 105 | 3 | 105 | 276 | 19 | 188 | 1.18e-22 | 93.6 |
| MS.gene27550.t1 | MTR_5g029990 | 26.866 | 268 | 172 | 6 | 8 | 270 | 12 | 260 | 1.59e-22 | 95.9 |
| MS.gene27550.t1 | MTR_6g406250 | 27.273 | 275 | 180 | 7 | 4 | 268 | 51 | 315 | 8.71e-21 | 92.0 |
| MS.gene27550.t1 | MTR_7g117190 | 31.602 | 231 | 136 | 9 | 115 | 326 | 3 | 230 | 8.61e-20 | 87.0 |
| MS.gene27550.t1 | MTR_6g406250 | 29.384 | 211 | 134 | 5 | 4 | 206 | 51 | 254 | 8.61e-19 | 84.7 |
| MS.gene27550.t1 | MTR_7g074865 | 82.500 | 40 | 7 | 0 | 1 | 40 | 1 | 40 | 3.28e-18 | 78.2 |
| MS.gene27550.t1 | MTR_3g101500 | 28.063 | 253 | 149 | 9 | 7 | 251 | 3 | 230 | 1.23e-16 | 79.3 |
| MS.gene27550.t1 | MTR_3g101500 | 28.063 | 253 | 149 | 9 | 7 | 251 | 3 | 230 | 1.33e-16 | 79.7 |
| MS.gene27550.t1 | MTR_2g013260 | 28.340 | 247 | 148 | 10 | 100 | 324 | 28 | 267 | 2.43e-16 | 78.2 |
| MS.gene27550.t1 | MTR_3g101500 | 28.421 | 190 | 116 | 6 | 7 | 196 | 3 | 172 | 2.40e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27550.t1 | AT2G45400 | 48.780 | 328 | 160 | 5 | 6 | 326 | 38 | 364 | 1.61e-104 | 310 |
| MS.gene27550.t1 | AT5G42800 | 43.976 | 332 | 173 | 5 | 1 | 326 | 1 | 325 | 1.65e-92 | 280 |
| MS.gene27550.t1 | AT2G45400 | 49.291 | 282 | 136 | 4 | 6 | 280 | 38 | 319 | 1.52e-90 | 273 |
| MS.gene27550.t1 | AT2G45400 | 47.931 | 290 | 144 | 4 | 43 | 326 | 19 | 307 | 4.18e-88 | 266 |
| MS.gene27550.t1 | AT1G61720 | 39.403 | 335 | 185 | 8 | 4 | 326 | 9 | 337 | 1.72e-78 | 243 |
| MS.gene27550.t1 | AT4G35420 | 42.121 | 330 | 178 | 8 | 1 | 326 | 1 | 321 | 2.03e-75 | 235 |
| MS.gene27550.t1 | AT2G45400 | 51.152 | 217 | 100 | 3 | 6 | 216 | 38 | 254 | 4.83e-70 | 219 |
| MS.gene27550.t1 | AT1G09510 | 38.037 | 326 | 192 | 6 | 1 | 323 | 1 | 319 | 3.34e-57 | 188 |
| MS.gene27550.t1 | AT2G02400 | 36.086 | 327 | 195 | 8 | 4 | 326 | 2 | 318 | 1.89e-56 | 186 |
| MS.gene27550.t1 | AT1G09480 | 37.082 | 329 | 197 | 7 | 1 | 326 | 1 | 322 | 1.42e-54 | 181 |
| MS.gene27550.t1 | AT4G27250 | 31.250 | 320 | 203 | 5 | 9 | 317 | 14 | 327 | 1.58e-54 | 181 |
| MS.gene27550.t1 | AT1G51410 | 34.242 | 330 | 203 | 7 | 2 | 326 | 3 | 323 | 4.53e-54 | 180 |
| MS.gene27550.t1 | AT1G09480 | 37.082 | 329 | 197 | 7 | 1 | 326 | 48 | 369 | 4.82e-54 | 181 |
| MS.gene27550.t1 | AT1G66800 | 35.494 | 324 | 200 | 8 | 4 | 326 | 3 | 318 | 5.55e-54 | 179 |
| MS.gene27550.t1 | AT5G19440 | 35.061 | 328 | 198 | 7 | 4 | 325 | 5 | 323 | 6.34e-54 | 179 |
| MS.gene27550.t1 | AT1G09490 | 36.170 | 329 | 200 | 7 | 1 | 326 | 1 | 322 | 9.03e-54 | 179 |
| MS.gene27550.t1 | AT4G27250 | 30.488 | 328 | 205 | 5 | 9 | 317 | 14 | 337 | 5.51e-53 | 178 |
| MS.gene27550.t1 | AT1G68540 | 34.783 | 322 | 199 | 7 | 10 | 326 | 6 | 321 | 7.40e-52 | 174 |
| MS.gene27550.t1 | AT5G58490 | 34.985 | 323 | 198 | 8 | 8 | 326 | 9 | 323 | 1.20e-50 | 171 |
| MS.gene27550.t1 | AT1G25460 | 34.891 | 321 | 198 | 6 | 10 | 326 | 6 | 319 | 3.24e-50 | 169 |
| MS.gene27550.t1 | AT1G09500 | 36.786 | 280 | 168 | 5 | 1 | 276 | 1 | 275 | 1.39e-49 | 167 |
| MS.gene27550.t1 | AT1G09500 | 36.491 | 285 | 172 | 5 | 1 | 281 | 1 | 280 | 4.10e-49 | 167 |
| MS.gene27550.t1 | AT2G33590 | 35.714 | 322 | 184 | 12 | 5 | 318 | 6 | 312 | 4.28e-44 | 154 |
| MS.gene27550.t1 | AT1G15950 | 34.268 | 321 | 198 | 9 | 8 | 326 | 13 | 322 | 6.22e-44 | 154 |
| MS.gene27550.t1 | AT1G15950 | 34.268 | 321 | 198 | 9 | 8 | 326 | 13 | 322 | 6.22e-44 | 154 |
| MS.gene27550.t1 | AT1G76470 | 33.333 | 315 | 203 | 5 | 5 | 317 | 4 | 313 | 2.88e-43 | 152 |
| MS.gene27550.t1 | AT1G80820 | 34.049 | 326 | 192 | 12 | 8 | 326 | 8 | 317 | 2.13e-42 | 149 |
| MS.gene27550.t1 | AT1G15950 | 34.304 | 309 | 191 | 8 | 8 | 314 | 13 | 311 | 5.15e-42 | 149 |
| MS.gene27550.t1 | AT2G33600 | 36.646 | 322 | 181 | 11 | 5 | 318 | 6 | 312 | 6.35e-42 | 148 |
| MS.gene27550.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 1.16e-38 | 138 |
| MS.gene27550.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 1.56e-38 | 138 |
| MS.gene27550.t1 | AT1G15950 | 35.897 | 273 | 163 | 8 | 8 | 278 | 13 | 275 | 1.85e-38 | 138 |
| MS.gene27550.t1 | AT1G09490 | 33.559 | 295 | 187 | 6 | 35 | 326 | 3 | 291 | 1.87e-38 | 138 |
| MS.gene27550.t1 | AT1G80820 | 35.612 | 278 | 157 | 11 | 8 | 278 | 8 | 270 | 1.93e-37 | 135 |
| MS.gene27550.t1 | AT1G09500 | 34.855 | 241 | 149 | 5 | 40 | 276 | 5 | 241 | 2.79e-33 | 124 |
| MS.gene27550.t1 | AT5G14700 | 30.479 | 292 | 168 | 10 | 4 | 276 | 51 | 326 | 7.52e-26 | 106 |
| MS.gene27550.t1 | AT1G68540 | 31.507 | 219 | 141 | 5 | 112 | 326 | 1 | 214 | 2.98e-25 | 101 |
| MS.gene27550.t1 | AT2G23910 | 28.013 | 307 | 194 | 10 | 9 | 303 | 11 | 302 | 6.08e-24 | 99.8 |
| MS.gene27550.t1 | AT5G14700 | 32.195 | 205 | 120 | 6 | 4 | 196 | 51 | 248 | 2.63e-21 | 92.4 |
| MS.gene27550.t1 | AT2G23910 | 27.675 | 271 | 178 | 8 | 9 | 272 | 11 | 270 | 3.25e-21 | 91.7 |
| MS.gene27550.t1 | AT2G23910 | 27.675 | 271 | 178 | 8 | 9 | 272 | 11 | 270 | 3.63e-21 | 91.7 |
| MS.gene27550.t1 | AT4G30470 | 26.923 | 312 | 188 | 12 | 9 | 302 | 11 | 300 | 1.87e-18 | 84.7 |
| MS.gene27550.t1 | AT1G15950 | 30.357 | 224 | 149 | 5 | 105 | 326 | 6 | 224 | 4.88e-17 | 79.7 |
| MS.gene27550.t1 | AT4G33360 | 28.175 | 252 | 150 | 9 | 7 | 251 | 2 | 229 | 9.34e-16 | 77.4 |
| MS.gene27550.t1 | AT4G33360 | 28.287 | 251 | 151 | 10 | 7 | 251 | 14 | 241 | 9.80e-16 | 77.0 |
| MS.gene27550.t1 | AT4G33360 | 28.175 | 252 | 150 | 9 | 7 | 251 | 14 | 241 | 1.34e-15 | 77.0 |
Find 62 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGATATTCTGGATATT+TGG | 0.178162 | 7.2:+30694455 | None:intergenic |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.206019 | 7.2:-30695141 | MS.gene27550:CDS |
| ACTGTTAGTATTTGATATTC+TGG | 0.207664 | 7.2:+30694447 | None:intergenic |
| CTTGAATTTGGTGAACAAAA+TGG | 0.220583 | 7.2:-30695129 | MS.gene27550:CDS |
| ACAAAACGACCAACAATAAA+AGG | 0.257121 | 7.2:+30695081 | None:intergenic |
| ATCAAGAGTCTCCTTGAAAA+TGG | 0.290608 | 7.2:-30696263 | MS.gene27550:CDS |
| GATGAGTTGAAGGAAATTAA+AGG | 0.307837 | 7.2:-30694423 | MS.gene27550:CDS |
| GGTTCTGCTGTTTCATTCAA+TGG | 0.327787 | 7.2:-30695267 | MS.gene27550:CDS |
| AGTTTCTTCGTGTTTAAATC+TGG | 0.331608 | 7.2:+30694390 | None:intergenic |
| CTTAGAAGTGTTAAACCATT+TGG | 0.332594 | 7.2:-30695195 | MS.gene27550:CDS |
| AGAACCGTCGATGGCGCATT+AGG | 0.342006 | 7.2:-30695348 | MS.gene27550:CDS |
| TCTACTTGAGAATTCTGTTC+CGG | 0.350560 | 7.2:-30694541 | MS.gene27550:CDS |
| AAAGGAAGAGTATGTGTAAC+TGG | 0.362480 | 7.2:-30696314 | MS.gene27550:CDS |
| TATTGAGAAAGCTCTTGTTT+TGG | 0.374279 | 7.2:-30695037 | MS.gene27550:CDS |
| TCAATAGAATCAGGAAGCTT+AGG | 0.380913 | 7.2:+30695054 | None:intergenic |
| TTGAATTTGGTGAACAAAAT+GGG | 0.381597 | 7.2:-30695128 | MS.gene27550:CDS |
| ATTGCTGCAGCAAAACTGTC+TGG | 0.389083 | 7.2:+30695450 | None:intergenic |
| TGACATTAACAGAACGTAAG+AGG | 0.420276 | 7.2:-30695545 | MS.gene27550:intron |
| CTACTTGAGAATTCTGTTCC+GGG | 0.432102 | 7.2:-30694540 | MS.gene27550:CDS |
| TCACTCACGGCGAAGTCAAT+TGG | 0.434477 | 7.2:+30695393 | None:intergenic |
| AGTTGAGACATCTCTTCAAT+AGG | 0.440279 | 7.2:+30694486 | None:intergenic |
| CAATAGAATCAGGAAGCTTA+GGG | 0.444039 | 7.2:+30695055 | None:intergenic |
| TTATGCTGTTTCCAAGACTT+TGG | 0.447067 | 7.2:-30695166 | MS.gene27550:CDS |
| AGCTTTCTCAGCCAAAGTCT+TGG | 0.452544 | 7.2:+30695155 | None:intergenic |
| AGAGCTTTCTCAATAGAATC+AGG | 0.454202 | 7.2:+30695045 | None:intergenic |
| ACTAACAGTAGATGAGTTGA+AGG | 0.472358 | 7.2:-30694433 | MS.gene27550:CDS |
| ATGTGTTGGATGAGAGTGAT+TGG | 0.477053 | 7.2:-30695233 | MS.gene27550:CDS |
| ACAGCATAATTCCAACCAAA+TGG | 0.481259 | 7.2:+30695180 | None:intergenic |
| GAAGTGTTAAACCATTTGGT+TGG | 0.489175 | 7.2:-30695191 | MS.gene27550:CDS |
| ATGCACCGGGTAGATTTGTC+AGG | 0.495956 | 7.2:+30695511 | None:intergenic |
| GTCCAAATGGCTGAAGGAAA+AGG | 0.516695 | 7.2:-30696332 | None:intergenic |
| TCTTCAATAGGTACAATGAA+TGG | 0.521628 | 7.2:+30694498 | None:intergenic |
| ATTCAATGTTGCAAGGAGAA+AGG | 0.530160 | 7.2:-30694312 | MS.gene27550:CDS |
| AGTATGTGTAACTGGAGGTA+CGG | 0.533565 | 7.2:-30696306 | MS.gene27550:CDS |
| ACCTGGATCAGCTCTAATAG+TGG | 0.533677 | 7.2:+30696226 | None:intergenic |
| ACGAAGAAACTCGTGGATGC+TGG | 0.539479 | 7.2:-30694378 | MS.gene27550:CDS |
| TATTTCTTCTGGTTCACTCA+CGG | 0.542470 | 7.2:+30695380 | None:intergenic |
| ACTGTCTGGGTTGCTTAGAT+CGG | 0.544855 | 7.2:+30695464 | None:intergenic |
| CAGCAATCGAAGGATGTGTC+GGG | 0.548077 | 7.2:-30695434 | MS.gene27550:CDS |
| TGGAAAAGACAATGATGTGT+TGG | 0.554067 | 7.2:-30695247 | MS.gene27550:CDS |
| TGAAGGAAATTAAAGGTGCA+AGG | 0.554380 | 7.2:-30694416 | MS.gene27550:CDS |
| ACCACTATTAGAGCTGATCC+AGG | 0.558931 | 7.2:-30696227 | MS.gene27550:intron |
| AATGCCTAATGCGCCATCGA+CGG | 0.565238 | 7.2:+30695344 | None:intergenic |
| GACATTAACAGAACGTAAGA+GGG | 0.566904 | 7.2:-30695544 | MS.gene27550:intron |
| GTATGTGTAACTGGAGGTAC+GGG | 0.572789 | 7.2:-30696305 | MS.gene27550:CDS |
| GCAGCAATCGAAGGATGTGT+CGG | 0.579142 | 7.2:-30695435 | MS.gene27550:CDS |
| GAGCAATTGTATCTACCTCC+CGG | 0.580073 | 7.2:+30694522 | None:intergenic |
| TTGCTGCAGCAAAACTGTCT+GGG | 0.581343 | 7.2:+30695451 | None:intergenic |
| AAGAGTGTCCAAATGGCTGA+AGG | 0.588094 | 7.2:-30696338 | None:intergenic |
| AGGTTTATATACACTTCAAG+TGG | 0.594598 | 7.2:-30695288 | MS.gene27550:CDS |
| GGCGAAGTCAATTGGTGAAG+CGG | 0.597111 | 7.2:+30695401 | None:intergenic |
| TGGTGTGACACGTTTCCACA+TGG | 0.600639 | 7.2:-30694598 | MS.gene27550:CDS |
| TGAATTCAAAGACAGTGAAG+AGG | 0.602314 | 7.2:-30695308 | MS.gene27550:CDS |
| CGATGCAATTCAATGTTGCA+AGG | 0.602642 | 7.2:-30694319 | MS.gene27550:CDS |
| AGTCAATTGGTGAAGCGGTG+TGG | 0.629454 | 7.2:+30695406 | None:intergenic |
| ACATGTTGATGATGTAGCTA+GGG | 0.630546 | 7.2:-30694574 | MS.gene27550:CDS |
| AGCTTCCTGACAAATCTACC+CGG | 0.636776 | 7.2:-30695516 | MS.gene27550:CDS |
| TACATGTTGATGATGTAGCT+AGG | 0.648760 | 7.2:-30694575 | MS.gene27550:CDS |
| TTTAAACACGAAGAAACTCG+TGG | 0.659776 | 7.2:-30694385 | MS.gene27550:CDS |
| CATCATCAACATGTACCATG+TGG | 0.691154 | 7.2:+30694583 | None:intergenic |
| CTTGAGAATTCTGTTCCGGG+AGG | 0.698317 | 7.2:-30694537 | MS.gene27550:CDS |
| GGAAGAGTATGTGTAACTGG+AGG | 0.698516 | 7.2:-30696311 | MS.gene27550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGAAAATATTAAAATAAAA+AGG | + | chr7.2:30694439-30694458 | None:intergenic | 10.0% |
| !! | AATTAACTATATTGTGTGTT+TGG | - | chr7.2:30694475-30694494 | MS.gene27550:CDS | 20.0% |
| !! | GTATATAGAAACAACTATAA+AGG | + | chr7.2:30694609-30694628 | None:intergenic | 20.0% |
| !! | TATTTGATATTCTGGATATT+TGG | + | chr7.2:30696176-30696195 | None:intergenic | 20.0% |
| !! | TCTCAAATTATTAACAATGT+CGG | + | chr7.2:30695737-30695756 | None:intergenic | 20.0% |
| !! | TGAATTTGACAAGATTATAA+TGG | + | chr7.2:30694743-30694762 | None:intergenic | 20.0% |
| ! | AAATTCACAGTAATTCTGTT+AGG | - | chr7.2:30694756-30694775 | MS.gene27550:intron | 25.0% |
| ! | AATTGTGGTAAAAACTTCTT+TGG | - | chr7.2:30694696-30694715 | MS.gene27550:intron | 25.0% |
| ! | ACTGTTAGTATTTGATATTC+TGG | + | chr7.2:30696184-30696203 | None:intergenic | 25.0% |
| ! | GGAAATTATAAGCATTTGTT+TGG | + | chr7.2:30695055-30695074 | None:intergenic | 25.0% |
| ! | TCTGTTAATGTCAAAAACAT+AGG | + | chr7.2:30695076-30695095 | None:intergenic | 25.0% |
| !! | AAAGAAACATGAGTTGAATA+AGG | + | chr7.2:30695637-30695656 | None:intergenic | 25.0% |
| !! | AGAAGTTTTTACCACAATTA+CGG | + | chr7.2:30694695-30694714 | None:intergenic | 25.0% |
| !! | GTCAATTTAAAACCTAAACT+CGG | - | chr7.2:30695949-30695968 | MS.gene27550:intron | 25.0% |
| !! | TTGAATTTGGTGAACAAAAT+GGG | - | chr7.2:30695500-30695519 | MS.gene27550:CDS | 25.0% |
| !! | TTGATTCTTCCTTTTATTGT+TGG | - | chr7.2:30695538-30695557 | MS.gene27550:intron | 25.0% |
| AAAAGGGTAATAAATTCACC+TGG | + | chr7.2:30694422-30694441 | None:intergenic | 30.0% | |
| AATTTATGACCTATGAAGCA+CGG | - | chr7.2:30695676-30695695 | MS.gene27550:intron | 30.0% | |
| ACAAAACGACCAACAATAAA+AGG | + | chr7.2:30695550-30695569 | None:intergenic | 30.0% | |
| AGGTTTATATACACTTCAAG+TGG | - | chr7.2:30695340-30695359 | MS.gene27550:CDS | 30.0% | |
| AGTTTCTTCGTGTTTAAATC+TGG | + | chr7.2:30696241-30696260 | None:intergenic | 30.0% | |
| CAATCATAATCTATGAAGCA+CGG | + | chr7.2:30695823-30695842 | None:intergenic | 30.0% | |
| TCTTCAATAGGTACAATGAA+TGG | + | chr7.2:30696133-30696152 | None:intergenic | 30.0% | |
| TTCACAAATAGAGTAAAACC+TGG | + | chr7.2:30694556-30694575 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACATGTGT+CGG | - | chr7.2:30695768-30695787 | MS.gene27550:intron | 30.0% | |
| ! | ATGAGATCGTTGATAAAGAT+TGG | - | chr7.2:30695901-30695920 | MS.gene27550:intron | 30.0% |
| ! | CTTGAATTTGGTGAACAAAA+TGG | - | chr7.2:30695499-30695518 | MS.gene27550:CDS | 30.0% |
| ! | GATGAGTTGAAGGAAATTAA+AGG | - | chr7.2:30696205-30696224 | MS.gene27550:intron | 30.0% |
| ! | GGTTTTACTCTATTTGTGAA+TGG | - | chr7.2:30694556-30694575 | MS.gene27550:CDS | 30.0% |
| ! | GTTGAAGAAATGTAGCTTTT+CGG | + | chr7.2:30695143-30695162 | None:intergenic | 30.0% |
| ! | TTCCAAGTCGATAAACTTTT+TGG | + | chr7.2:30694782-30694801 | None:intergenic | 30.0% |
| !! | AATGGTCATTAGTCTTGATT+TGG | - | chr7.2:30694574-30694593 | MS.gene27550:CDS | 30.0% |
| !! | ATGGTCATTAGTCTTGATTT+GGG | - | chr7.2:30694575-30694594 | MS.gene27550:CDS | 30.0% |
| !! | CTTAGAAGTGTTAAACCATT+TGG | - | chr7.2:30695433-30695452 | MS.gene27550:CDS | 30.0% |
| !! | CTTTTTGTCACTATTTCTTC+TGG | + | chr7.2:30695262-30695281 | None:intergenic | 30.0% |
| !! | TATATTGTGTGTTTGGTTTG+TGG | - | chr7.2:30694482-30694501 | MS.gene27550:CDS | 30.0% |
| !! | TATTGAGAAAGCTCTTGTTT+TGG | - | chr7.2:30695591-30695610 | MS.gene27550:intron | 30.0% |
| !!! | AAAGCTCTTGTTTTGGTATT+AGG | - | chr7.2:30695598-30695617 | MS.gene27550:intron | 30.0% |
| !!! | CATTTTTGTTTAACTTGACC+AGG | - | chr7.2:30694535-30694554 | MS.gene27550:CDS | 30.0% |
| ACAGCATAATTCCAACCAAA+TGG | + | chr7.2:30695451-30695470 | None:intergenic | 35.0% | |
| AGAGCTTTCTCAATAGAATC+AGG | + | chr7.2:30695586-30695605 | None:intergenic | 35.0% | |
| AGTTGAGACATCTCTTCAAT+AGG | + | chr7.2:30696145-30696164 | None:intergenic | 35.0% | |
| ATCAAGAGTCTCCTTGAAAA+TGG | - | chr7.2:30694365-30694384 | MS.gene27550:CDS | 35.0% | |
| ATTCAATGTTGCAAGGAGAA+AGG | - | chr7.2:30696316-30696335 | MS.gene27550:CDS | 35.0% | |
| CAACGATCTCATGATTGAAA+TGG | + | chr7.2:30695893-30695912 | None:intergenic | 35.0% | |
| CAATAGAATCAGGAAGCTTA+GGG | + | chr7.2:30695576-30695595 | None:intergenic | 35.0% | |
| CAGTTTCTCTAGCCTAAAAT+CGG | + | chr7.2:30694893-30694912 | None:intergenic | 35.0% | |
| CTCGTATATATCTGAGTTCA+CGG | - | chr7.2:30694641-30694660 | MS.gene27550:intron | 35.0% | |
| GACATTAACAGAACGTAAGA+GGG | - | chr7.2:30695084-30695103 | MS.gene27550:CDS | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.2:30695487-30695506 | MS.gene27550:CDS | 35.0% | |
| GCAGGCAAAAAAGAACAAAT+TGG | - | chr7.2:30696010-30696029 | MS.gene27550:intron | 35.0% | |
| TAGAGAAACTGCAAAGGATT+TGG | - | chr7.2:30694902-30694921 | MS.gene27550:intron | 35.0% | |
| TCAATAGAATCAGGAAGCTT+AGG | + | chr7.2:30695577-30695596 | None:intergenic | 35.0% | |
| TCTACTTGAGAATTCTGTTC+CGG | - | chr7.2:30696087-30696106 | MS.gene27550:intron | 35.0% | |
| TGAATTCAAAGACAGTGAAG+AGG | - | chr7.2:30695320-30695339 | MS.gene27550:CDS | 35.0% | |
| TGACATTAACAGAACGTAAG+AGG | - | chr7.2:30695083-30695102 | MS.gene27550:CDS | 35.0% | |
| TGGAAAAGACAATGATGTGT+TGG | - | chr7.2:30695381-30695400 | MS.gene27550:CDS | 35.0% | |
| TTTAAACACGAAGAAACTCG+TGG | - | chr7.2:30696243-30696262 | MS.gene27550:CDS | 35.0% | |
| ! | AAAGGAAGAGTATGTGTAAC+TGG | - | chr7.2:30694314-30694333 | MS.gene27550:CDS | 35.0% |
| ! | ACTAACAGTAGATGAGTTGA+AGG | - | chr7.2:30696195-30696214 | MS.gene27550:intron | 35.0% |
| ! | GAAGTGTTAAACCATTTGGT+TGG | - | chr7.2:30695437-30695456 | MS.gene27550:CDS | 35.0% |
| ! | TGAAGGAAATTAAAGGTGCA+AGG | - | chr7.2:30696212-30696231 | MS.gene27550:intron | 35.0% |
| !! | ACATGTTGATGATGTAGCTA+GGG | - | chr7.2:30696054-30696073 | MS.gene27550:intron | 35.0% |
| !! | GTGTTTGGTTTGTGGAATAT+GGG | - | chr7.2:30694490-30694509 | MS.gene27550:CDS | 35.0% |
| !! | TACATGTTGATGATGTAGCT+AGG | - | chr7.2:30696053-30696072 | MS.gene27550:intron | 35.0% |
| !! | TATTTCTTCTGGTTCACTCA+CGG | + | chr7.2:30695251-30695270 | None:intergenic | 35.0% |
| !! | TGACAGAGTATCCATTTTCA+AGG | + | chr7.2:30694379-30694398 | None:intergenic | 35.0% |
| !! | TGTGTTTGGTTTGTGGAATA+TGG | - | chr7.2:30694489-30694508 | MS.gene27550:CDS | 35.0% |
| !! | TTATGCTGTTTCCAAGACTT+TGG | - | chr7.2:30695462-30695481 | MS.gene27550:CDS | 35.0% |
| AACGGTCATATACCGAGTTT+AGG | + | chr7.2:30695964-30695983 | None:intergenic | 40.0% | |
| AGTATGTGTAACTGGAGGTA+CGG | - | chr7.2:30694322-30694341 | MS.gene27550:CDS | 40.0% | |
| ATGTGTTGGATGAGAGTGAT+TGG | - | chr7.2:30695395-30695414 | MS.gene27550:CDS | 40.0% | |
| CATCATCAACATGTACCATG+TGG | + | chr7.2:30696048-30696067 | None:intergenic | 40.0% | |
| CGATCTCATGATTGAAATGG+CGG | + | chr7.2:30695890-30695909 | None:intergenic | 40.0% | |
| CGATGCAATTCAATGTTGCA+AGG | - | chr7.2:30696309-30696328 | MS.gene27550:CDS | 40.0% | |
| CTACTTGAGAATTCTGTTCC+GGG | - | chr7.2:30696088-30696107 | MS.gene27550:intron | 40.0% | |
| GCGGTATCATATTCTGACTT+GGG | + | chr7.2:30695871-30695890 | None:intergenic | 40.0% | |
| GTCAATGGGTAAAGATCGAA+CGG | + | chr7.2:30695982-30696001 | None:intergenic | 40.0% | |
| TTAGGCTAGAGAAACTGCAA+AGG | - | chr7.2:30694896-30694915 | MS.gene27550:intron | 40.0% | |
| ! | GGCCAAAAAGTTTATCGACT+TGG | - | chr7.2:30694777-30694796 | MS.gene27550:intron | 40.0% |
| ! | TGACTTGGGTATTCTGACTT+GGG | + | chr7.2:30695857-30695876 | None:intergenic | 40.0% |
| !! | CGACTTAGATTTAGCTTGAG+AGG | + | chr7.2:30694814-30694833 | None:intergenic | 40.0% |
| !! | GGTTCTGCTGTTTCATTCAA+TGG | - | chr7.2:30695361-30695380 | MS.gene27550:CDS | 40.0% |
| !! | TGAATCCATCGACCGATTTT+AGG | - | chr7.2:30694878-30694897 | MS.gene27550:intron | 40.0% |
| ACCACAATTACGGTGACATG+TGG | + | chr7.2:30694685-30694704 | None:intergenic | 45.0% | |
| ACCACATGTCACCGTAATTG+TGG | - | chr7.2:30694681-30694700 | MS.gene27550:intron | 45.0% | |
| ACCACTATTAGAGCTGATCC+AGG | - | chr7.2:30694401-30694420 | MS.gene27550:CDS | 45.0% | |
| ACTGTCTGGGTTGCTTAGAT+CGG | + | chr7.2:30695167-30695186 | None:intergenic | 45.0% | |
| AGCTTCCTGACAAATCTACC+CGG | - | chr7.2:30695112-30695131 | MS.gene27550:CDS | 45.0% | |
| AGCTTTCTCAGCCAAAGTCT+TGG | + | chr7.2:30695476-30695495 | None:intergenic | 45.0% | |
| ATTGCTGCAGCAAAACTGTC+TGG | + | chr7.2:30695181-30695200 | None:intergenic | 45.0% | |
| GAGCAATTGTATCTACCTCC+CGG | + | chr7.2:30696109-30696128 | None:intergenic | 45.0% | |
| GCCTGCACATCAAAGTCAAT+GGG | + | chr7.2:30695996-30696015 | None:intergenic | 45.0% | |
| GGCGGTATCATATTCTGACT+TGG | + | chr7.2:30695872-30695891 | None:intergenic | 45.0% | |
| GTGACAAAAAGAACCGTCGA+TGG | - | chr7.2:30695271-30695290 | MS.gene27550:CDS | 45.0% | |
| TCTAGCCTAAAATCGGTCGA+TGG | + | chr7.2:30694886-30694905 | None:intergenic | 45.0% | |
| TGACCTATGAAGCACGGATA+CGG | - | chr7.2:30695682-30695701 | MS.gene27550:intron | 45.0% | |
| TGCCTGCACATCAAAGTCAA+TGG | + | chr7.2:30695997-30696016 | None:intergenic | 45.0% | |
| TTGCTGCAGCAAAACTGTCT+GGG | + | chr7.2:30695180-30695199 | None:intergenic | 45.0% | |
| ! | ACCTGGATCAGCTCTAATAG+TGG | + | chr7.2:30694405-30694424 | None:intergenic | 45.0% |
| ! | AGTTTTGCTGCAGCAATCGA+AGG | - | chr7.2:30695184-30695203 | MS.gene27550:CDS | 45.0% |
| ! | ATGTAGCTTTTCGGATGCAC+CGG | + | chr7.2:30695134-30695153 | None:intergenic | 45.0% |
| ! | GGAAGAGTATGTGTAACTGG+AGG | - | chr7.2:30694317-30694336 | MS.gene27550:CDS | 45.0% |
| ! | GTACGGGTTTTCTTGGTTCA+TGG | - | chr7.2:30694339-30694358 | MS.gene27550:CDS | 45.0% |
| ! | GTATGTGTAACTGGAGGTAC+GGG | - | chr7.2:30694323-30694342 | MS.gene27550:CDS | 45.0% |
| !! | ACCCATTGACTTTGATGTGC+AGG | - | chr7.2:30695992-30696011 | MS.gene27550:intron | 45.0% |
| !! | CTGACTTGGGTATTCTGACT+TGG | + | chr7.2:30695858-30695877 | None:intergenic | 45.0% |
| !! | TGAAAATATTAAAATAAAAA+GGG | + | chr7.2:30694438-30694457 | None:intergenic | 5.0% |
| AATGCCTAATGCGCCATCGA+CGG | + | chr7.2:30695287-30695306 | None:intergenic | 50.0% | |
| ACGAAGAAACTCGTGGATGC+TGG | - | chr7.2:30696250-30696269 | MS.gene27550:CDS | 50.0% | |
| AGTCAATTGGTGAAGCGGTG+TGG | + | chr7.2:30695225-30695244 | None:intergenic | 50.0% | |
| ATGCACCGGGTAGATTTGTC+AGG | + | chr7.2:30695120-30695139 | None:intergenic | 50.0% | |
| CAGCAATCGAAGGATGTGTC+GGG | - | chr7.2:30695194-30695213 | MS.gene27550:CDS | 50.0% | |
| CTTGAGAATTCTGTTCCGGG+AGG | - | chr7.2:30696091-30696110 | MS.gene27550:intron | 50.0% | |
| GCAGCAATCGAAGGATGTGT+CGG | - | chr7.2:30695193-30695212 | MS.gene27550:CDS | 50.0% | |
| GGCGAAGTCAATTGGTGAAG+CGG | + | chr7.2:30695230-30695249 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr7.2:30695812-30695831 | None:intergenic | 50.0% | |
| TCACTCACGGCGAAGTCAAT+TGG | + | chr7.2:30695238-30695257 | None:intergenic | 50.0% | |
| TGGTGTGACACGTTTCCACA+TGG | - | chr7.2:30696030-30696049 | MS.gene27550:intron | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | + | chr7.2:30695688-30695707 | None:intergenic | 50.0% | |
| ! | TGTAGCTTTTCGGATGCACC+GGG | + | chr7.2:30695133-30695152 | None:intergenic | 50.0% |
| !! | ACTGGAGGTACGGGTTTTCT+TGG | - | chr7.2:30694332-30694351 | MS.gene27550:CDS | 50.0% |
| AGAACCGTCGATGGCGCATT+AGG | - | chr7.2:30695280-30695299 | MS.gene27550:CDS | 55.0% | |
| ATGAAGCACGGACACTCCTC+GGG | + | chr7.2:30695811-30695830 | None:intergenic | 55.0% | |
| TGAAGCACGGATACGGACAC+CGG | - | chr7.2:30695689-30695708 | MS.gene27550:intron | 55.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr7.2:30695711-30695730 | None:intergenic | 60.0% | |
| TACGGACACCGGACACGACA+CGG | - | chr7.2:30695700-30695719 | MS.gene27550:intron | 60.0% | |
| GCACGGACACTCCTCGGGTT+AGG | + | chr7.2:30695806-30695825 | None:intergenic | 65.0% | |
| GTCGTGTCACGCCTAACCCG+AGG | - | chr7.2:30695792-30695811 | MS.gene27550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 30694302 | 30696348 | 30694302 | ID=MS.gene27550 |
| chr7.2 | mRNA | 30694302 | 30696348 | 30694302 | ID=MS.gene27550.t1;Parent=MS.gene27550 |
| chr7.2 | exon | 30696228 | 30696348 | 30696228 | ID=MS.gene27550.t1.exon1;Parent=MS.gene27550.t1 |
| chr7.2 | CDS | 30696228 | 30696348 | 30696228 | ID=cds.MS.gene27550.t1;Parent=MS.gene27550.t1 |
| chr7.2 | exon | 30695031 | 30695555 | 30695031 | ID=MS.gene27550.t1.exon2;Parent=MS.gene27550.t1 |
| chr7.2 | CDS | 30695031 | 30695555 | 30695031 | ID=cds.MS.gene27550.t1;Parent=MS.gene27550.t1 |
| chr7.2 | exon | 30694302 | 30694636 | 30694302 | ID=MS.gene27550.t1.exon3;Parent=MS.gene27550.t1 |
| chr7.2 | CDS | 30694302 | 30694636 | 30694302 | ID=cds.MS.gene27550.t1;Parent=MS.gene27550.t1 |
| Gene Sequence |
| Protein sequence |
