Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020886.t1 | XP_003617951.1 | 97.7 | 799 | 11 | 1 | 1 | 799 | 1 | 792 | 0.00E+00 | 1500.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020886.t1 | F4JFN3 | 76.5 | 805 | 177 | 6 | 1 | 799 | 1 | 799 | 0.0e+00 | 1163.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020886.t1 | G7KEN6 | 97.7 | 799 | 11 | 1 | 1 | 799 | 1 | 792 | 0.0e+00 | 1500.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64024 | MS.gene020886 | PPI |
| MS.gene020833 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene64225 | PPI |
| MS.gene029690 | MS.gene020886 | PPI |
| MS.gene81285 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene040499 | PPI |
| MS.gene81288 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene62607 | PPI |
| MS.gene020886 | MS.gene061126 | PPI |
| MS.gene58998 | MS.gene020886 | PPI |
| MS.gene38262 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene75388 | PPI |
| MS.gene020886 | MS.gene60613 | PPI |
| MS.gene020886 | MS.gene62123 | PPI |
| MS.gene020886 | MS.gene64023 | PPI |
| MS.gene37989 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene75389 | PPI |
| MS.gene020886 | MS.gene49154 | PPI |
| MS.gene020834 | MS.gene020886 | PPI |
| MS.gene38261 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene006231 | PPI |
| MS.gene24136 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene30654 | PPI |
| MS.gene37988 | MS.gene020886 | PPI |
| MS.gene020886 | MS.gene27084 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020886.t1 | MTR_5g097320 | 97.747 | 799 | 11 | 1 | 1 | 799 | 1 | 792 | 0.0 | 1607 |
| MS.gene020886.t1 | MTR_0009s0390 | 70.270 | 703 | 204 | 3 | 96 | 795 | 81 | 781 | 0.0 | 1005 |
| MS.gene020886.t1 | MTR_1g025430 | 46.067 | 712 | 324 | 15 | 96 | 762 | 77 | 773 | 0.0 | 601 |
| MS.gene020886.t1 | MTR_6g452990 | 47.041 | 676 | 338 | 9 | 96 | 762 | 4 | 668 | 0.0 | 588 |
| MS.gene020886.t1 | MTR_1g099840 | 45.914 | 673 | 335 | 9 | 96 | 762 | 9 | 658 | 0.0 | 564 |
| MS.gene020886.t1 | MTR_5g096430 | 45.414 | 676 | 346 | 10 | 97 | 762 | 5 | 667 | 0.0 | 560 |
| MS.gene020886.t1 | MTR_5g096460 | 45.414 | 676 | 346 | 10 | 97 | 762 | 5 | 667 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020886.t1 | AT3G07770 | 77.679 | 784 | 165 | 5 | 1 | 780 | 1 | 778 | 0.0 | 1209 |
| MS.gene020886.t1 | AT3G07770 | 77.679 | 784 | 165 | 5 | 1 | 780 | 1 | 778 | 0.0 | 1209 |
| MS.gene020886.t1 | AT3G07770 | 77.679 | 784 | 165 | 5 | 1 | 780 | 1 | 778 | 0.0 | 1209 |
| MS.gene020886.t1 | AT2G04030 | 68.750 | 736 | 221 | 4 | 63 | 795 | 42 | 771 | 0.0 | 1020 |
| MS.gene020886.t1 | AT2G04030 | 68.478 | 736 | 220 | 5 | 63 | 795 | 42 | 768 | 0.0 | 1010 |
| MS.gene020886.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 88 | 762 | 68 | 770 | 0.0 | 577 |
| MS.gene020886.t1 | AT4G24190 | 45.582 | 713 | 340 | 12 | 88 | 762 | 68 | 770 | 0.0 | 576 |
| MS.gene020886.t1 | AT5G52640 | 46.381 | 677 | 342 | 9 | 96 | 762 | 4 | 669 | 0.0 | 566 |
| MS.gene020886.t1 | AT5G56030 | 45.347 | 677 | 347 | 10 | 96 | 762 | 4 | 667 | 0.0 | 558 |
| MS.gene020886.t1 | AT5G56010 | 45.347 | 677 | 347 | 10 | 96 | 762 | 4 | 667 | 0.0 | 558 |
| MS.gene020886.t1 | AT5G56000 | 45.347 | 677 | 347 | 10 | 96 | 762 | 4 | 667 | 0.0 | 558 |
| MS.gene020886.t1 | AT5G56030 | 43.484 | 706 | 347 | 11 | 96 | 762 | 4 | 696 | 0.0 | 543 |
Find 184 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGCAAACACTTGAAAT+TGG | 0.131640 | 5.4:+76534191 | MS.gene020886:CDS |
| CCACTCTATTATCAGGAATT+TGG | 0.164620 | 5.4:+76535148 | MS.gene020886:CDS |
| CACATGAAGTCTTATATTCT+TGG | 0.170508 | 5.4:-76533562 | None:intergenic |
| AACAACTTAATTGGTCAATT+TGG | 0.187122 | 5.4:+76532207 | MS.gene020886:CDS |
| ACAATAGATCAATCGCTCTT+AGG | 0.222613 | 5.4:-76535305 | None:intergenic |
| TGCAAAGAACACACCTTTCT+TGG | 0.234178 | 5.4:+76534374 | MS.gene020886:CDS |
| TGTTTCTCAGGGAACTTATT+AGG | 0.248250 | 5.4:+76531023 | MS.gene020886:CDS |
| ATTCAATCTGATAAAGATAA+TGG | 0.255102 | 5.4:+76531875 | MS.gene020886:CDS |
| CAAATGAGACCCAACCTATC+TGG | 0.256609 | 5.4:+76533096 | MS.gene020886:CDS |
| ACTTCAGCCTCTACAGTTTC+TGG | 0.257108 | 5.4:-76535846 | None:intergenic |
| GCTAATGAAGGCACAAACTA+TGG | 0.276666 | 5.4:+76535067 | MS.gene020886:CDS |
| CCAAGCTGTGCTGGATTATC+AGG | 0.281050 | 5.4:-76535732 | None:intergenic |
| TCCTCTTTAGTGACTTCTTT+AGG | 0.283016 | 5.4:-76533220 | None:intergenic |
| TGGATTGCAACCTCATCTAT+TGG | 0.284889 | 5.4:-76534532 | None:intergenic |
| GGTGCTGACAACAACTTAAT+TGG | 0.303646 | 5.4:+76532198 | MS.gene020886:CDS |
| TTCCCAAACATATTGCTTAT+CGG | 0.305484 | 5.4:-76532391 | None:intergenic |
| GTCCTGGTGTCAGGAAAATT+TGG | 0.316123 | 5.4:+76534918 | MS.gene020886:CDS |
| GTTCCTGCCTACGCTCCATC+TGG | 0.323157 | 5.4:+76533513 | MS.gene020886:CDS |
| TTGACAAAACTCAAGTATCT+TGG | 0.328697 | 5.4:-76533737 | None:intergenic |
| AAGTCTTATATTCTTGGTCT+TGG | 0.338011 | 5.4:-76533556 | None:intergenic |
| AACGTCTTGCTCCGTTGCTT+CGG | 0.343341 | 5.4:+76534241 | MS.gene020886:CDS |
| TTTGGTTTCAAGTGGATTTA+CGG | 0.346354 | 5.4:+76535338 | MS.gene020886:CDS |
| TATCTTTATCAGATTGAATT+CGG | 0.348716 | 5.4:-76531871 | None:intergenic |
| GGATCCAGCTGAGGCGAAAA+AGG | 0.350990 | 5.4:+76532871 | MS.gene020886:CDS |
| AGTGCATAGTCATACTTCTT+TGG | 0.352271 | 5.4:-76532717 | None:intergenic |
| GACTGGATTAAGAAACGTTT+GGG | 0.359599 | 5.4:+76534843 | MS.gene020886:CDS |
| ACATATTGCTTATCGGATCT+TGG | 0.360519 | 5.4:-76532384 | None:intergenic |
| GATCCGATAAGCAATATGTT+TGG | 0.367611 | 5.4:+76532388 | MS.gene020886:CDS |
| CAATAGATCAATCGCTCTTA+GGG | 0.368780 | 5.4:-76535304 | None:intergenic |
| TGTAGGACTATGAAAAGTTC+TGG | 0.370106 | 5.4:+76534163 | MS.gene020886:intron |
| GTATGGCTCTTGGTGGTAAA+TGG | 0.382991 | 5.4:+76535778 | MS.gene020886:CDS |
| TTTCATTCAATAGGATAGTA+AGG | 0.386928 | 5.4:+76532170 | MS.gene020886:intron |
| TGAGCGGACTCAAAATGATT+AGG | 0.388104 | 5.4:-76535807 | None:intergenic |
| TGCAGGGTGAGGTAGAATTT+AGG | 0.394366 | 5.4:+76533478 | MS.gene020886:intron |
| GTATTAAATTCTGAGAAATC+TGG | 0.394667 | 5.4:+76530726 | MS.gene020886:CDS |
| TTTGGCAAACACTTGAAATT+GGG | 0.396537 | 5.4:+76534192 | MS.gene020886:CDS |
| AATATACACTTGGCAGGAAA+AGG | 0.400859 | 5.4:+76532688 | MS.gene020886:CDS |
| TCGCCTTGTGTCCTGGTGTC+AGG | 0.401511 | 5.4:+76534909 | MS.gene020886:CDS |
| ATCTTTCCTCCAAGCTGTGC+TGG | 0.401912 | 5.4:-76535741 | None:intergenic |
| GAGCTCTTCGCCTTGTGTCC+TGG | 0.409189 | 5.4:+76534902 | MS.gene020886:CDS |
| AGTCTTATATTCTTGGTCTT+GGG | 0.413260 | 5.4:-76533555 | None:intergenic |
| ATCCGATAAGCAATATGTTT+GGG | 0.413273 | 5.4:+76532389 | MS.gene020886:CDS |
| ACCCTGACCACTCTATTATC+AGG | 0.413610 | 5.4:+76535141 | MS.gene020886:CDS |
| TTCAATCTGATAAAGATAAT+GGG | 0.415563 | 5.4:+76531876 | MS.gene020886:CDS |
| TTACCTCAGTCTTCTCATCT+TGG | 0.416217 | 5.4:-76532898 | None:intergenic |
| GGAAGTGTTAATCAGCTAAC+TGG | 0.417552 | 5.4:+76530747 | MS.gene020886:CDS |
| AGCAAGGAAGACTTGGATCT+AGG | 0.417696 | 5.4:+76534595 | MS.gene020886:CDS |
| TTCACCTGCTTACTCCCATT+CGG | 0.423088 | 5.4:+76530104 | MS.gene020886:CDS |
| AGACTGTTGTTGAGAAGTAC+TGG | 0.424364 | 5.4:+76533060 | MS.gene020886:CDS |
| TGACAAAACTCAAGTATCTT+GGG | 0.425510 | 5.4:-76533736 | None:intergenic |
| GAAAAGTTCTGGGATAACTT+TGG | 0.427899 | 5.4:+76534174 | MS.gene020886:CDS |
| CTTGGAGAAACTTGCGGAGA+AGG | 0.430733 | 5.4:+76534392 | MS.gene020886:CDS |
| CCTCTTGGAATCAACTTCTC+AGG | 0.431495 | 5.4:-76532459 | None:intergenic |
| GTAACAAGGAAGTGTTTCTC+AGG | 0.432748 | 5.4:+76531011 | MS.gene020886:CDS |
| ACAAGCTTCTCAATCCTCTC+TGG | 0.433027 | 5.4:-76532635 | None:intergenic |
| CTTAGGGCCTCTTGATCGTC+AGG | 0.435461 | 5.4:-76535288 | None:intergenic |
| TGACTGGATTAAGAAACGTT+TGG | 0.435632 | 5.4:+76534842 | MS.gene020886:CDS |
| TACCTCTCTGTTGTCGCTCA+TGG | 0.442910 | 5.4:-76534003 | None:intergenic |
| TCTATTGTACGATGCAGCTT+TGG | 0.443940 | 5.4:+76535320 | MS.gene020886:CDS |
| TTTAATACGGAGTACCATCT+TGG | 0.447727 | 5.4:-76530711 | None:intergenic |
| AGATGACTTCGATGGAGAAC+TGG | 0.450154 | 5.4:+76533602 | MS.gene020886:CDS |
| CTTCAGCCTCTACAGTTTCT+GGG | 0.452155 | 5.4:-76535845 | None:intergenic |
| ATATTGGAAATGAGACAAAC+TGG | 0.453616 | 5.4:-76532670 | None:intergenic |
| TCGCCTTACACTGCACCTTA+AGG | 0.455084 | 5.4:+76532485 | MS.gene020886:CDS |
| GAAAACATTTAACGAATACT+TGG | 0.455803 | 5.4:+76533261 | MS.gene020886:CDS |
| GGAGACGGAGGAAGAGCGTT+TGG | 0.457467 | 5.4:-76530028 | None:intergenic |
| TCCGCAAGTTTCTCCAAGAA+AGG | 0.458632 | 5.4:-76534387 | None:intergenic |
| GAACATGAAACCAGATCAAA+AGG | 0.465967 | 5.4:+76534317 | MS.gene020886:CDS |
| AGGAAAGATATACGAGATGA+TGG | 0.466450 | 5.4:+76535755 | MS.gene020886:CDS |
| TAACGAATACTTGGAGCCAT+TGG | 0.466806 | 5.4:+76533270 | MS.gene020886:CDS |
| TTATGCAGTGATACAGGCAT+TGG | 0.473198 | 5.4:+76531983 | MS.gene020886:intron |
| TAAAACTAACCCAGATAGGT+TGG | 0.474462 | 5.4:-76533106 | None:intergenic |
| ATTTGGTTGGTCTGCGAACA+TGG | 0.475124 | 5.4:+76534935 | MS.gene020886:CDS |
| AAAGGAAAAGGAAATGAAGC+AGG | 0.476641 | 5.4:+76534803 | MS.gene020886:CDS |
| AGATTTCTCAGAATTTAATA+CGG | 0.477390 | 5.4:-76530724 | None:intergenic |
| TTCCCAGATGGAGCGTAGGC+AGG | 0.477582 | 5.4:-76533516 | None:intergenic |
| TGACATTAGCAAGGAAGACT+TGG | 0.479175 | 5.4:+76534588 | MS.gene020886:CDS |
| TGGTACTCAAATTTCTCAGC+TGG | 0.482191 | 5.4:-76530861 | None:intergenic |
| TGATGAAGAGTTTATCAGCT+TGG | 0.484199 | 5.4:+76534281 | MS.gene020886:CDS |
| TAAGAATGAGGAAAAGGAAA+AGG | 0.486144 | 5.4:+76534791 | MS.gene020886:CDS |
| TTGGCAGGTTAGTCGGCTCA+TGG | 0.486833 | 5.4:+76530964 | MS.gene020886:intron |
| ATAGCATCCTTCATTAGATC+AGG | 0.486977 | 5.4:-76531836 | None:intergenic |
| ATCATAAAACTAACCCAGAT+AGG | 0.486997 | 5.4:-76533110 | None:intergenic |
| CGTTACGGCGGCGCACTTCG+CGG | 0.488236 | 5.4:+76530060 | MS.gene020886:CDS |
| AGGTGATAAGAATGAGGAAA+AGG | 0.490165 | 5.4:+76534785 | MS.gene020886:intron |
| CGCGAAGTGCGCCGCCGTAA+CGG | 0.493116 | 5.4:-76530059 | None:intergenic |
| AGTTTAGCTCGACAATTGAC+TGG | 0.495708 | 5.4:+76534826 | MS.gene020886:CDS |
| ATTTCCAATATACACTTGGC+AGG | 0.502520 | 5.4:+76532682 | MS.gene020886:CDS |
| CAGGAACTAGTTGACTGTCT+TGG | 0.504084 | 5.4:+76532016 | MS.gene020886:CDS |
| CAGTAATGCAAGTGATGCCT+TGG | 0.506403 | 5.4:+76531784 | MS.gene020886:intron |
| TGTTGAGAAGTACTGGGATT+GGG | 0.509707 | 5.4:+76533067 | MS.gene020886:CDS |
| GTACTTCTCAACAACAGTCT+TGG | 0.510001 | 5.4:-76533057 | None:intergenic |
| TTCATGAATTCCATGCTAGC+GGG | 0.511537 | 5.4:-76535095 | None:intergenic |
| GTGCGCCGCCGTAACGGAGA+AGG | 0.513297 | 5.4:-76530053 | None:intergenic |
| ACACCTTAAGGTGCAGTGTA+AGG | 0.514341 | 5.4:-76532488 | None:intergenic |
| CTTAATTGGTCAATTTGGTG+TGG | 0.515790 | 5.4:+76532212 | MS.gene020886:CDS |
| TTCCTGATAATAGAGTGGTC+AGG | 0.516335 | 5.4:-76535143 | None:intergenic |
| GTGGTCGAGCCTACTGAGGC+TGG | 0.520167 | 5.4:+76535867 | MS.gene020886:CDS |
| CCAAAATATCAAAACATACA+AGG | 0.521596 | 5.4:+76534552 | MS.gene020886:CDS |
| ATATACACTTGGCAGGAAAA+GGG | 0.521867 | 5.4:+76532689 | MS.gene020886:CDS |
| GTCTCCGCCCTTCTCCGTTA+CGG | 0.522940 | 5.4:+76530045 | MS.gene020886:CDS |
| GTAGGACTATGAAAAGTTCT+GGG | 0.524059 | 5.4:+76534164 | MS.gene020886:intron |
| AGGATCTGTCTCCTCAGCTA+TGG | 0.525265 | 5.4:-76532439 | None:intergenic |
| TTAATTGGTCAATTTGGTGT+GGG | 0.529032 | 5.4:+76532213 | MS.gene020886:CDS |
| AAAACTAACCCAGATAGGTT+GGG | 0.529739 | 5.4:-76533105 | None:intergenic |
| AAATGAGACCCAACCTATCT+GGG | 0.530516 | 5.4:+76533097 | MS.gene020886:CDS |
| TGGGAGTAAGCAGGTGAAAG+TGG | 0.531331 | 5.4:-76530099 | None:intergenic |
| TATGGGTGATCCCGCTAGCA+TGG | 0.531370 | 5.4:+76535085 | MS.gene020886:CDS |
| TTCATTTCAGATGACTTCGA+TGG | 0.532439 | 5.4:+76533594 | MS.gene020886:CDS |
| CCTGATAATCCAGCACAGCT+TGG | 0.534512 | 5.4:+76535732 | MS.gene020886:CDS |
| GATAATCCAGCACAGCTTGG+AGG | 0.535534 | 5.4:+76535735 | MS.gene020886:CDS |
| TCCTAAAGAAGTCACTAAAG+AGG | 0.536099 | 5.4:+76533219 | MS.gene020886:CDS |
| TTCCTGCCTACGCTCCATCT+GGG | 0.540612 | 5.4:+76533514 | MS.gene020886:CDS |
| GAGATGATGGGTATGGCTCT+TGG | 0.541355 | 5.4:+76535768 | MS.gene020886:CDS |
| ACCTTTCTTGGAGAAACTTG+CGG | 0.546313 | 5.4:+76534386 | MS.gene020886:CDS |
| CAATAGGATAGTAAGGGTGC+TGG | 0.548567 | 5.4:+76532177 | MS.gene020886:intron |
| TTGCTGCTGCAGGCTAATGA+AGG | 0.548694 | 5.4:+76535055 | MS.gene020886:intron |
| TCCTGATAATAGAGTGGTCA+GGG | 0.548965 | 5.4:-76535142 | None:intergenic |
| GTAACGGAGAAGGGCGGAGA+CGG | 0.549045 | 5.4:-76530043 | None:intergenic |
| GAGGAAACGGTTGGTCAGAA+AGG | 0.550346 | 5.4:+76533956 | MS.gene020886:CDS |
| GATATACGAGATGATGGGTA+TGG | 0.558270 | 5.4:+76535761 | MS.gene020886:CDS |
| AGTGTAAGGCGAGTTCCTCT+TGG | 0.558292 | 5.4:-76532474 | None:intergenic |
| CCTCTACAGTTTCTGGGACA+TGG | 0.565301 | 5.4:-76535839 | None:intergenic |
| GAGAAAGATGAATACCGAAT+GGG | 0.567401 | 5.4:-76530118 | None:intergenic |
| TGGTGTCAGGAAAATTTGGT+TGG | 0.568365 | 5.4:+76534922 | MS.gene020886:CDS |
| GATGCAGCTTTGGTTTCAAG+TGG | 0.569210 | 5.4:+76535330 | MS.gene020886:CDS |
| TGCGCCGCCGTAACGGAGAA+GGG | 0.569272 | 5.4:-76530052 | None:intergenic |
| GTTGGTCTGCGAACATGGAA+AGG | 0.569848 | 5.4:+76534940 | MS.gene020886:CDS |
| AACTAATCCTGACGATCAAG+AGG | 0.573204 | 5.4:+76535281 | MS.gene020886:CDS |
| ATTACGTCATCCTTCCCAGA+TGG | 0.574953 | 5.4:-76533528 | None:intergenic |
| CTAATGAAGGCACAAACTAT+GGG | 0.576380 | 5.4:+76535068 | MS.gene020886:CDS |
| TACAGAGCCTGATCTAATGA+AGG | 0.576601 | 5.4:+76531829 | MS.gene020886:CDS |
| TGGAATTCATGAAAAGCAGA+AGG | 0.576845 | 5.4:+76535105 | MS.gene020886:CDS |
| TGCCTACGCTCCATCTGGGA+AGG | 0.576861 | 5.4:+76533518 | MS.gene020886:CDS |
| CACGTGACACATTGAGTGGA+AGG | 0.579217 | 5.4:-76533781 | None:intergenic |
| TACTCAAATTTCTCAGCTGG+TGG | 0.579869 | 5.4:-76530858 | None:intergenic |
| TTGTTGAGAAGTACTGGGAT+TGG | 0.581708 | 5.4:+76533066 | MS.gene020886:CDS |
| GCAATATGTTTGGGAAGGAG+AGG | 0.585310 | 5.4:+76532398 | MS.gene020886:CDS |
| TTTCCTGACACCAGGACACA+AGG | 0.586847 | 5.4:-76534912 | None:intergenic |
| TTTGGTGGATCCAATAGATG+AGG | 0.590144 | 5.4:+76534522 | MS.gene020886:CDS |
| AGGTGCGGATCATGAGGAAA+CGG | 0.590921 | 5.4:+76533943 | MS.gene020886:intron |
| AGGCATTGGTATGACTAAGC+AGG | 0.591667 | 5.4:+76531997 | MS.gene020886:CDS |
| ATTACAGGTGGAGGTTGATG+AGG | 0.592517 | 5.4:+76532850 | MS.gene020886:intron |
| TTCTGTAGGTGATAAGAATG+AGG | 0.593306 | 5.4:+76534779 | MS.gene020886:intron |
| GGAAAGATATACGAGATGAT+GGG | 0.595782 | 5.4:+76535756 | MS.gene020886:CDS |
| CTTGGAACTATTGCTCAAAG+TGG | 0.596448 | 5.4:+76532034 | MS.gene020886:CDS |
| TTTCATGAATTCCATGCTAG+CGG | 0.596609 | 5.4:-76535096 | None:intergenic |
| TCTCATTTCCAATATACACT+TGG | 0.601056 | 5.4:+76532678 | MS.gene020886:CDS |
| AGAAACTGTAGAGGCTGAAG+TGG | 0.603525 | 5.4:+76535848 | MS.gene020886:CDS |
| GCGGATCATGAGGAAACGGT+TGG | 0.606904 | 5.4:+76533947 | MS.gene020886:CDS |
| ACGGAGAAGGGCGGAGACGG+AGG | 0.607948 | 5.4:-76530040 | None:intergenic |
| TTCATTCAATAGGATAGTAA+GGG | 0.610752 | 5.4:+76532171 | MS.gene020886:intron |
| GATAAGCAATATGTTTGGGA+AGG | 0.612331 | 5.4:+76532393 | MS.gene020886:CDS |
| GACTGTTGTTGAGAAGTACT+GGG | 0.614936 | 5.4:+76533061 | MS.gene020886:CDS |
| AATACCGAATGGGAGTAAGC+AGG | 0.615067 | 5.4:-76530108 | None:intergenic |
| ATTTCACGTGACACATTGAG+TGG | 0.618251 | 5.4:-76533785 | None:intergenic |
| AAGACGGCAATACCTCAGCT+TGG | 0.624748 | 5.4:-76530881 | None:intergenic |
| CCTGAGAAGTTGATTCCAAG+AGG | 0.629531 | 5.4:+76532459 | MS.gene020886:CDS |
| AGAATGACACAAAACCAAGA+TGG | 0.630846 | 5.4:+76530697 | MS.gene020886:CDS |
| GATGAGTAAAACCGAAGCAA+CGG | 0.631540 | 5.4:-76534252 | None:intergenic |
| TGTATAAACTGTTAACAATG+AGG | 0.633998 | 5.4:-76530988 | None:intergenic |
| TGAAGTGGTCGAGCCTACTG+AGG | 0.634281 | 5.4:+76535863 | MS.gene020886:CDS |
| CCAAATTCCTGATAATAGAG+TGG | 0.641419 | 5.4:-76535148 | None:intergenic |
| CAAGACGTTTGTGATTCTCA+CGG | 0.644243 | 5.4:-76534227 | None:intergenic |
| ATGATGGGTATGGCTCTTGG+TGG | 0.648855 | 5.4:+76535771 | MS.gene020886:CDS |
| ACTAGTTGCATTAGATTCTG+CGG | 0.656854 | 5.4:-76530832 | None:intergenic |
| ATCCTTCCCAGATGGAGCGT+AGG | 0.657983 | 5.4:-76533520 | None:intergenic |
| CCATGTCCCAGAAACTGTAG+AGG | 0.661329 | 5.4:+76535839 | MS.gene020886:CDS |
| TAACAGTTTATACAGTAACA+AGG | 0.664231 | 5.4:+76530997 | MS.gene020886:CDS |
| GGAATTCATGAAAAGCAGAA+GGG | 0.664392 | 5.4:+76535106 | MS.gene020886:CDS |
| GCATGAAGGTGCGGATCATG+AGG | 0.668221 | 5.4:+76533937 | MS.gene020886:intron |
| TATTGGAAATGAGACAAACT+GGG | 0.669362 | 5.4:-76532669 | None:intergenic |
| GACATGGTACTGTGTTTGAG+CGG | 0.671668 | 5.4:-76535823 | None:intergenic |
| TAACAAGGAAGTGTTTCTCA+GGG | 0.675191 | 5.4:+76531012 | MS.gene020886:CDS |
| GAAATTTGAGTACCAAGCTG+AGG | 0.677594 | 5.4:+76530869 | MS.gene020886:CDS |
| GTGATGCCTTGGATAAGCTG+CGG | 0.678986 | 5.4:+76531795 | MS.gene020886:CDS |
| TCCGCCCTTCTCCGTTACGG+CGG | 0.686445 | 5.4:+76530048 | MS.gene020886:CDS |
| TAGCTCATATACCATAGCTG+AGG | 0.691981 | 5.4:+76532428 | MS.gene020886:CDS |
| GGTTGATGAGGATCCAGCTG+AGG | 0.697511 | 5.4:+76532862 | MS.gene020886:CDS |
| GCCGCCGTAACGGAGAAGGG+CGG | 0.712660 | 5.4:-76530049 | None:intergenic |
| ATCCATGAGCGACAACAGAG+AGG | 0.716932 | 5.4:+76534001 | MS.gene020886:CDS |
| GTAAAGTGTGATGATGCCAA+TGG | 0.728238 | 5.4:-76533286 | None:intergenic |
| ATCATCACACTTTACCACAG+AGG | 0.738590 | 5.4:+76533294 | MS.gene020886:CDS |
| CAACCAAGATGAGAAGACTG+AGG | 0.741912 | 5.4:+76532895 | MS.gene020886:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATTTTTTTTAT+AGG | + | chr5.4:76531481-76531500 | MS.gene020886:intron | 0.0% |
| !! | CAAATTATAAATTGAAATAA+TGG | + | chr5.4:76535221-76535240 | MS.gene020886:intron | 10.0% |
| !! | AGAAAACTATTTATAGAAAT+CGG | + | chr5.4:76531399-76531418 | MS.gene020886:intron | 15.0% |
| !! | ATATGTGTAAAGTTAAAAAA+CGG | - | chr5.4:76533013-76533032 | None:intergenic | 15.0% |
| !! | TAATTAAAACCAAAGATATA+GGG | - | chr5.4:76531716-76531735 | None:intergenic | 15.0% |
| !! | TTAATTAAAACCAAAGATAT+AGG | - | chr5.4:76531717-76531736 | None:intergenic | 15.0% |
| !! | TTAATTTCTCAAATTATTAC+CGG | - | chr5.4:76535473-76535492 | None:intergenic | 15.0% |
| !!! | ATATTGTGATATATTTGTTT+TGG | + | chr5.4:76530945-76530964 | MS.gene020886:intron | 15.0% |
| !! | AAATCTTTAATCTAAACTGT+TGG | + | chr5.4:76535549-76535568 | MS.gene020886:intron | 20.0% |
| !! | AATATTGAAAACAACAACAA+TGG | - | chr5.4:76530621-76530640 | None:intergenic | 20.0% |
| !! | ACTAATATACTAATAACAGA+AGG | - | chr5.4:76532535-76532554 | None:intergenic | 20.0% |
| !! | ACTTACAGTAATTTGAAAAA+GGG | + | chr5.4:76530270-76530289 | MS.gene020886:intron | 20.0% |
| !! | AGATTTCTCAGAATTTAATA+CGG | - | chr5.4:76530727-76530746 | None:intergenic | 20.0% |
| !! | ATCCAAAATTAATTACGAAA+AGG | - | chr5.4:76534645-76534664 | None:intergenic | 20.0% |
| !! | ATTCAATCTGATAAAGATAA+TGG | + | chr5.4:76531875-76531894 | MS.gene020886:CDS | 20.0% |
| !! | TATATAGTAGCAATTATTGA+GGG | - | chr5.4:76531188-76531207 | None:intergenic | 20.0% |
| !! | TATATATACTTTGATTCATC+TGG | + | chr5.4:76533363-76533382 | MS.gene020886:intron | 20.0% |
| !! | TATCTTTATCAGATTGAATT+CGG | - | chr5.4:76531874-76531893 | None:intergenic | 20.0% |
| !! | TTCAATCTGATAAAGATAAT+GGG | + | chr5.4:76531876-76531895 | MS.gene020886:CDS | 20.0% |
| !!! | ATAATGGTAATGTATTCTAT+TGG | + | chr5.4:76535237-76535256 | MS.gene020886:intron | 20.0% |
| !!! | ATATGTGTATATTTTTTGTG+TGG | + | chr5.4:76532333-76532352 | MS.gene020886:intron | 20.0% |
| !!! | ATTTTGGATTAATGCTATAT+TGG | + | chr5.4:76534656-76534675 | MS.gene020886:intron | 20.0% |
| !!! | CTTTTGTTATGTAATTTTGT+AGG | + | chr5.4:76534492-76534511 | MS.gene020886:intron | 20.0% |
| !!! | GTATATTAGTTTCTTTATTC+TGG | + | chr5.4:76532545-76532564 | MS.gene020886:intron | 20.0% |
| !!! | TAATAAATATCCTTTTGATC+TGG | - | chr5.4:76534330-76534349 | None:intergenic | 20.0% |
| !!! | TATTTCTAGAACAAATTTTG+AGG | - | chr5.4:76531674-76531693 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCGTAATTAATTT+TGG | + | chr5.4:76534640-76534659 | MS.gene020886:intron | 20.0% |
| !!! | TTGAAAAGAGATATGTTTTT+GGG | + | chr5.4:76530789-76530808 | MS.gene020886:CDS | 20.0% |
| !!! | TTTGAAAAGAGATATGTTTT+TGG | + | chr5.4:76530788-76530807 | MS.gene020886:CDS | 20.0% |
| ! | AACAACTTAATTGGTCAATT+TGG | + | chr5.4:76532207-76532226 | MS.gene020886:CDS | 25.0% |
| ! | AACTAACTATGTAGCTTATA+TGG | - | chr5.4:76530538-76530557 | None:intergenic | 25.0% |
| ! | AATGTTATGTTTCAGTGTTA+TGG | + | chr5.4:76531083-76531102 | MS.gene020886:intron | 25.0% |
| ! | ATCAAAATTTGTCTCATTAC+AGG | + | chr5.4:76532835-76532854 | MS.gene020886:intron | 25.0% |
| ! | ATCATAATTTCATGGACAAT+TGG | - | chr5.4:76532953-76532972 | None:intergenic | 25.0% |
| ! | ATTAACCTCTTGTAAAATCA+AGG | - | chr5.4:76531515-76531534 | None:intergenic | 25.0% |
| ! | CACTTACAGTAATTTGAAAA+AGG | + | chr5.4:76530269-76530288 | MS.gene020886:intron | 25.0% |
| ! | CCAAAATATCAAAACATACA+AGG | + | chr5.4:76534552-76534571 | MS.gene020886:CDS | 25.0% |
| ! | CTATATAGTAGCAATTATTG+AGG | - | chr5.4:76531189-76531208 | None:intergenic | 25.0% |
| ! | GAAAACATTTAACGAATACT+TGG | + | chr5.4:76533261-76533280 | MS.gene020886:CDS | 25.0% |
| ! | GATGCTAAATATTTGGTAAA+TGG | + | chr5.4:76535614-76535633 | MS.gene020886:intron | 25.0% |
| ! | GTATTCTATTGGTAAATTTC+AGG | + | chr5.4:76535248-76535267 | MS.gene020886:intron | 25.0% |
| ! | TAACAGTTTATACAGTAACA+AGG | + | chr5.4:76530997-76531016 | MS.gene020886:CDS | 25.0% |
| ! | TAATAACAGAAGGTTGAAAA+TGG | - | chr5.4:76532525-76532544 | None:intergenic | 25.0% |
| ! | TATTACATGTTGAAGTTTGT+TGG | + | chr5.4:76530398-76530417 | MS.gene020886:intron | 25.0% |
| ! | TGTATAAACTGTTAACAATG+AGG | - | chr5.4:76530991-76531010 | None:intergenic | 25.0% |
| ! | TTCATTCAATAGGATAGTAA+GGG | + | chr5.4:76532171-76532190 | MS.gene020886:intron | 25.0% |
| ! | TTTCATTCAATAGGATAGTA+AGG | + | chr5.4:76532170-76532189 | MS.gene020886:intron | 25.0% |
| !! | GTATTAAATTCTGAGAAATC+TGG | + | chr5.4:76530726-76530745 | MS.gene020886:CDS | 25.0% |
| !! | TTATATGGTTTGAAACACTA+AGG | - | chr5.4:76530523-76530542 | None:intergenic | 25.0% |
| !! | TTTTAAATCTCACGTTTTTG+TGG | + | chr5.4:76530191-76530210 | MS.gene020886:intron | 25.0% |
| !! | TTTTACCTTGATTTTACAAG+AGG | + | chr5.4:76531507-76531526 | MS.gene020886:intron | 25.0% |
| !!! | AATTTTGTAGGTGCTATTTT+TGG | + | chr5.4:76534504-76534523 | MS.gene020886:intron | 25.0% |
| !!! | ATATATAGTGTTGACTATGT+CGG | - | chr5.4:76535434-76535453 | None:intergenic | 25.0% |
| !!! | ATATTTTTTGTGTGGTTTGA+AGG | + | chr5.4:76532341-76532360 | MS.gene020886:intron | 25.0% |
| !!! | CCAAGTTTTAAACTTCAAAA+AGG | - | chr5.4:76530584-76530603 | None:intergenic | 25.0% |
| !!! | CCTTGTATGTTTTGATATTT+TGG | - | chr5.4:76534555-76534574 | None:intergenic | 25.0% |
| !!! | CCTTTTTGAAGTTTAAAACT+TGG | + | chr5.4:76530581-76530600 | MS.gene020886:intron | 25.0% |
| !!! | CTTCATTTTAAGTTTTTAGC+TGG | + | chr5.4:76532304-76532323 | MS.gene020886:intron | 25.0% |
| !!! | CTTCTTTTTGAGAAAGATTT+AGG | + | chr5.4:76532091-76532110 | MS.gene020886:intron | 25.0% |
| AAAATGAACACTGAAACTTG+TGG | - | chr5.4:76531342-76531361 | None:intergenic | 30.0% | |
| AAAATTTGTCTCATTACAGG+TGG | + | chr5.4:76532838-76532857 | MS.gene020886:intron | 30.0% | |
| AATATTTAGCATCATACGTG+AGG | - | chr5.4:76535607-76535626 | None:intergenic | 30.0% | |
| AGCAGTTAAACTTTAACATC+TGG | - | chr5.4:76532977-76532996 | None:intergenic | 30.0% | |
| ATATTGGAAATGAGACAAAC+TGG | - | chr5.4:76532673-76532692 | None:intergenic | 30.0% | |
| ATCATAAAACTAACCCAGAT+AGG | - | chr5.4:76533113-76533132 | None:intergenic | 30.0% | |
| ATCCGATAAGCAATATGTTT+GGG | + | chr5.4:76532389-76532408 | MS.gene020886:CDS | 30.0% | |
| CAATATATTAACAATTGCGC+TGG | - | chr5.4:76530931-76530950 | None:intergenic | 30.0% | |
| CACGTATGATGCTAAATATT+TGG | + | chr5.4:76535607-76535626 | MS.gene020886:intron | 30.0% | |
| CATAACAGGAAAACAGAATA+AGG | - | chr5.4:76532127-76532146 | None:intergenic | 30.0% | |
| CTACTATATAGTTTGAGCAT+CGG | + | chr5.4:76531198-76531217 | MS.gene020886:intron | 30.0% | |
| CTACTGTTATACAACGATTT+AGG | + | chr5.4:76535378-76535397 | MS.gene020886:intron | 30.0% | |
| CTCTAACCCAATCAATTTAT+TGG | + | chr5.4:76535702-76535721 | MS.gene020886:intron | 30.0% | |
| CTTGTTGAATTTCTATGACA+TGG | - | chr5.4:76531566-76531585 | None:intergenic | 30.0% | |
| GCTCTGATGTATTATTTACT+TGG | + | chr5.4:76533706-76533725 | MS.gene020886:intron | 30.0% | |
| GTGTTAGAAATCTCATAGAA+TGG | + | chr5.4:76531431-76531450 | MS.gene020886:intron | 30.0% | |
| TAAGAATGAGGAAAAGGAAA+AGG | + | chr5.4:76534791-76534810 | MS.gene020886:CDS | 30.0% | |
| TAATTTGAACGCTAATGTGT+TGG | + | chr5.4:76533436-76533455 | MS.gene020886:intron | 30.0% | |
| TACTGTATAGTTTGAGCATT+GGG | + | chr5.4:76531059-76531078 | MS.gene020886:intron | 30.0% | |
| TATTGGAAATGAGACAAACT+GGG | - | chr5.4:76532672-76532691 | None:intergenic | 30.0% | |
| TCATAGAATGGCAAAATCTT+GGG | + | chr5.4:76531443-76531462 | MS.gene020886:intron | 30.0% | |
| TCTCATTTCCAATATACACT+TGG | + | chr5.4:76532678-76532697 | MS.gene020886:CDS | 30.0% | |
| TGACAAAACTCAAGTATCTT+GGG | - | chr5.4:76533739-76533758 | None:intergenic | 30.0% | |
| TGACATGGATCAAATACAAA+AGG | - | chr5.4:76531551-76531570 | None:intergenic | 30.0% | |
| TGCACACCAATAAATTGATT+GGG | - | chr5.4:76535711-76535730 | None:intergenic | 30.0% | |
| TGGAAATTGGTTACTTGAAA+TGG | + | chr5.4:76533160-76533179 | MS.gene020886:intron | 30.0% | |
| TTCCCAAACATATTGCTTAT+CGG | - | chr5.4:76532394-76532413 | None:intergenic | 30.0% | |
| TTCTTTACTTTGAATGCAGT+TGG | + | chr5.4:76531945-76531964 | MS.gene020886:intron | 30.0% | |
| TTGACAAAACTCAAGTATCT+TGG | - | chr5.4:76533740-76533759 | None:intergenic | 30.0% | |
| TTTGGCAAACACTTGAAATT+GGG | + | chr5.4:76534192-76534211 | MS.gene020886:CDS | 30.0% | |
| ! | AAGTCTTATATTCTTGGTCT+TGG | - | chr5.4:76533559-76533578 | None:intergenic | 30.0% |
| ! | AGTCTTATATTCTTGGTCTT+GGG | - | chr5.4:76533558-76533577 | None:intergenic | 30.0% |
| ! | CAATAAATTGATTGGGTTAG+AGG | - | chr5.4:76535704-76535723 | None:intergenic | 30.0% |
| ! | CACATGAAGTCTTATATTCT+TGG | - | chr5.4:76533565-76533584 | None:intergenic | 30.0% |
| ! | CATCTGGAATCATAATTTCA+TGG | - | chr5.4:76532961-76532980 | None:intergenic | 30.0% |
| ! | GAATTTTGTTGACATTAGCA+AGG | + | chr5.4:76534579-76534598 | MS.gene020886:CDS | 30.0% |
| ! | GATTTTCTTTGATTGTGAGT+AGG | + | chr5.4:76530668-76530687 | MS.gene020886:intron | 30.0% |
| ! | TGACATGGATTAAATACGAA+AGG | - | chr5.4:76531594-76531613 | None:intergenic | 30.0% |
| ! | TTTCTTTTATGCAGTGATAC+AGG | + | chr5.4:76531977-76531996 | MS.gene020886:intron | 30.0% |
| ! | TTTGGTTTCAAGTGGATTTA+CGG | + | chr5.4:76535338-76535357 | MS.gene020886:CDS | 30.0% |
| !! | AAAGTTTTTGAAAGCTCTGA+AGG | + | chr5.4:76532063-76532082 | MS.gene020886:CDS | 30.0% |
| !! | ACCTCAGTTTTTCTCTAAAA+AGG | + | chr5.4:76533402-76533421 | MS.gene020886:intron | 30.0% |
| !! | AGATACTTGAGTTTTGTCAA+AGG | + | chr5.4:76533740-76533759 | MS.gene020886:CDS | 30.0% |
| !! | TCCTTTTTAGAGAAAAACTG+AGG | - | chr5.4:76533406-76533425 | None:intergenic | 30.0% |
| !! | TTAATTGGTCAATTTGGTGT+GGG | + | chr5.4:76532213-76532232 | MS.gene020886:CDS | 30.0% |
| !! | TTTCTTTATTCTGGAGCTTA+TGG | + | chr5.4:76532554-76532573 | MS.gene020886:intron | 30.0% |
| !!! | ATGTCACTTTCATTTTCGAA+AGG | - | chr5.4:76535016-76535035 | None:intergenic | 30.0% |
| !!! | TGTGATATATTTGTTTTGGC+AGG | + | chr5.4:76530949-76530968 | MS.gene020886:intron | 30.0% |
| AAAACTAACCCAGATAGGTT+GGG | - | chr5.4:76533108-76533127 | None:intergenic | 35.0% | |
| AAACTTGTGGCAATCTATTG+GGG | - | chr5.4:76531329-76531348 | None:intergenic | 35.0% | |
| AAAGGAAAAGGAAATGAAGC+AGG | + | chr5.4:76534803-76534822 | MS.gene020886:CDS | 35.0% | |
| AATATACACTTGGCAGGAAA+AGG | + | chr5.4:76532688-76532707 | MS.gene020886:CDS | 35.0% | |
| ACAATAGATCAATCGCTCTT+AGG | - | chr5.4:76535308-76535327 | None:intergenic | 35.0% | |
| ACACATAAAGATTGCACTTG+AGG | - | chr5.4:76533334-76533353 | None:intergenic | 35.0% | |
| ACATATTGCTTATCGGATCT+TGG | - | chr5.4:76532387-76532406 | None:intergenic | 35.0% | |
| ACTAGTTGCATTAGATTCTG+CGG | - | chr5.4:76530835-76530854 | None:intergenic | 35.0% | |
| AGAATGACACAAAACCAAGA+TGG | + | chr5.4:76530697-76530716 | MS.gene020886:CDS | 35.0% | |
| AGGAAAGATATACGAGATGA+TGG | + | chr5.4:76535755-76535774 | MS.gene020886:CDS | 35.0% | |
| AGGTGATAAGAATGAGGAAA+AGG | + | chr5.4:76534785-76534804 | MS.gene020886:intron | 35.0% | |
| AGTGCATAGTCATACTTCTT+TGG | - | chr5.4:76532720-76532739 | None:intergenic | 35.0% | |
| ATAGCATCCTTCATTAGATC+AGG | - | chr5.4:76531839-76531858 | None:intergenic | 35.0% | |
| ATATACACTTGGCAGGAAAA+GGG | + | chr5.4:76532689-76532708 | MS.gene020886:CDS | 35.0% | |
| ATTACTGTGAAAAAGAACGC+AGG | - | chr5.4:76531771-76531790 | None:intergenic | 35.0% | |
| ATTTCCAATATACACTTGGC+AGG | + | chr5.4:76532682-76532701 | MS.gene020886:CDS | 35.0% | |
| CAATAGATCAATCGCTCTTA+GGG | - | chr5.4:76535307-76535326 | None:intergenic | 35.0% | |
| CCAAATTCCTGATAATAGAG+TGG | - | chr5.4:76535151-76535170 | None:intergenic | 35.0% | |
| CCACTCTATTATCAGGAATT+TGG | + | chr5.4:76535148-76535167 | MS.gene020886:CDS | 35.0% | |
| CTACTGTATAGTTTGAGCAT+TGG | + | chr5.4:76531058-76531077 | MS.gene020886:intron | 35.0% | |
| CTCAAACTATACAGTAGTGA+TGG | - | chr5.4:76531055-76531074 | None:intergenic | 35.0% | |
| CTCATAGAATGGCAAAATCT+TGG | + | chr5.4:76531442-76531461 | MS.gene020886:intron | 35.0% | |
| CTGCACACCAATAAATTGAT+TGG | - | chr5.4:76535712-76535731 | None:intergenic | 35.0% | |
| CTTTGGCAAACACTTGAAAT+TGG | + | chr5.4:76534191-76534210 | MS.gene020886:CDS | 35.0% | |
| GAAACTTGTGGCAATCTATT+GGG | - | chr5.4:76531330-76531349 | None:intergenic | 35.0% | |
| GAACATGAAACCAGATCAAA+AGG | + | chr5.4:76534317-76534336 | MS.gene020886:CDS | 35.0% | |
| GACTGGATTAAGAAACGTTT+GGG | + | chr5.4:76534843-76534862 | MS.gene020886:CDS | 35.0% | |
| GAGAAAGATGAATACCGAAT+GGG | - | chr5.4:76530121-76530140 | None:intergenic | 35.0% | |
| GATAAGCAATATGTTTGGGA+AGG | + | chr5.4:76532393-76532412 | MS.gene020886:CDS | 35.0% | |
| GATCCGATAAGCAATATGTT+TGG | + | chr5.4:76532388-76532407 | MS.gene020886:CDS | 35.0% | |
| GCAGCTGGTAAAATATTAAC+AGG | - | chr5.4:76534132-76534151 | None:intergenic | 35.0% | |
| GGAAAGATATACGAGATGAT+GGG | + | chr5.4:76535756-76535775 | MS.gene020886:CDS | 35.0% | |
| GGAATTCATGAAAAGCAGAA+GGG | + | chr5.4:76535106-76535125 | MS.gene020886:CDS | 35.0% | |
| GTAGCAATTATTGAGGGAAA+AGG | - | chr5.4:76531182-76531201 | None:intergenic | 35.0% | |
| GTAGGACTATGAAAAGTTCT+GGG | + | chr5.4:76534164-76534183 | MS.gene020886:intron | 35.0% | |
| TAAAACTAACCCAGATAGGT+TGG | - | chr5.4:76533109-76533128 | None:intergenic | 35.0% | |
| TATATTAACAATTGCGCTGG+AGG | - | chr5.4:76530928-76530947 | None:intergenic | 35.0% | |
| TATTAGACTGACGTCAATAC+CGG | + | chr5.4:76535451-76535470 | MS.gene020886:intron | 35.0% | |
| TCAAACCAAAATGTGCATTG+TGG | + | chr5.4:76535666-76535685 | MS.gene020886:intron | 35.0% | |
| TCCTAAAGAAGTCACTAAAG+AGG | + | chr5.4:76533219-76533238 | MS.gene020886:CDS | 35.0% | |
| TCCTCTTTAGTGACTTCTTT+AGG | - | chr5.4:76533223-76533242 | None:intergenic | 35.0% | |
| TGAAACTTGTGGCAATCTAT+TGG | - | chr5.4:76531331-76531350 | None:intergenic | 35.0% | |
| TGACTGGATTAAGAAACGTT+TGG | + | chr5.4:76534842-76534861 | MS.gene020886:CDS | 35.0% | |
| TGATGAAGAGTTTATCAGCT+TGG | + | chr5.4:76534281-76534300 | MS.gene020886:CDS | 35.0% | |
| TGGAATTCATGAAAAGCAGA+AGG | + | chr5.4:76535105-76535124 | MS.gene020886:CDS | 35.0% | |
| TGTAGGACTATGAAAAGTTC+TGG | + | chr5.4:76534163-76534182 | MS.gene020886:intron | 35.0% | |
| TGTCAAGTACCCTATATCTT+TGG | + | chr5.4:76531704-76531723 | MS.gene020886:intron | 35.0% | |
| TGTTTCTCAGGGAACTTATT+AGG | + | chr5.4:76531023-76531042 | MS.gene020886:CDS | 35.0% | |
| TTACTGTGAAAAAGAACGCA+GGG | - | chr5.4:76531770-76531789 | None:intergenic | 35.0% | |
| TTAGCATCAAACACTTCTGA+TGG | + | chr5.4:76530454-76530473 | MS.gene020886:intron | 35.0% | |
| TTCATTTCAGATGACTTCGA+TGG | + | chr5.4:76533594-76533613 | MS.gene020886:CDS | 35.0% | |
| TTCTGTAGGTGATAAGAATG+AGG | + | chr5.4:76534779-76534798 | MS.gene020886:intron | 35.0% | |
| TTCTTTGATTGTGAGTAGGT+GGG | + | chr5.4:76530672-76530691 | MS.gene020886:intron | 35.0% | |
| TTTCATGAATTCCATGCTAG+CGG | - | chr5.4:76535099-76535118 | None:intergenic | 35.0% | |
| TTTCTTTGATTGTGAGTAGG+TGG | + | chr5.4:76530671-76530690 | MS.gene020886:intron | 35.0% | |
| ! | AAAGGCTTTTGACATGATTC+TGG | + | chr5.4:76533974-76533993 | MS.gene020886:CDS | 35.0% |
| ! | AAGGCTTTTGACATGATTCT+GGG | + | chr5.4:76533975-76533994 | MS.gene020886:CDS | 35.0% |
| ! | AATTTCACGTCCAGTTTTCA+AGG | - | chr5.4:76532800-76532819 | None:intergenic | 35.0% |
| ! | ACTATGCACTCATGATCTTT+TGG | + | chr5.4:76532730-76532749 | MS.gene020886:intron | 35.0% |
| ! | ACTGTATAGTTTGAGCATTG+GGG | + | chr5.4:76531060-76531079 | MS.gene020886:intron | 35.0% |
| ! | ACTTACCACAATGCACATTT+TGG | - | chr5.4:76535674-76535693 | None:intergenic | 35.0% |
| ! | ATTTCACGTCCAGTTTTCAA+GGG | - | chr5.4:76532799-76532818 | None:intergenic | 35.0% |
| ! | ATTTCATGGACAATTGGTTC+AGG | - | chr5.4:76532947-76532966 | None:intergenic | 35.0% |
| ! | CTAATGAAGGCACAAACTAT+GGG | + | chr5.4:76535068-76535087 | MS.gene020886:CDS | 35.0% |
| ! | CTTAATTGGTCAATTTGGTG+TGG | + | chr5.4:76532212-76532231 | MS.gene020886:CDS | 35.0% |
| ! | GAAATTTTCGACACACCTTA+AGG | - | chr5.4:76532503-76532522 | None:intergenic | 35.0% |
| ! | GAAGTTTAAAACTTGGAGCT+TGG | + | chr5.4:76530588-76530607 | MS.gene020886:intron | 35.0% |
| ! | GGATAAAAGTGATGATGATG+TGG | + | chr5.4:76532279-76532298 | MS.gene020886:intron | 35.0% |
| ! | TTTAATACGGAGTACCATCT+TGG | - | chr5.4:76530714-76530733 | None:intergenic | 35.0% |
| ! | TTTAGGTTCCACTGTGAAAT+TGG | + | chr5.4:76535395-76535414 | MS.gene020886:intron | 35.0% |
| ! | TTTCATGGACAATTGGTTCA+GGG | - | chr5.4:76532946-76532965 | None:intergenic | 35.0% |
| ! | TTTTCCTGCCAAGTGTATAT+TGG | - | chr5.4:76532689-76532708 | None:intergenic | 35.0% |
| !! | ACGAAGGTGTTTCATTCAAT+AGG | + | chr5.4:76532161-76532180 | MS.gene020886:intron | 35.0% |
| !! | ATGTAGTTTGCTGTTTCTGT+AGG | + | chr5.4:76534765-76534784 | MS.gene020886:intron | 35.0% |
| !! | CTAAACTGTTGGTGCTATAT+CGG | + | chr5.4:76535560-76535579 | MS.gene020886:intron | 35.0% |
| !! | GAAAAGTTCTGGGATAACTT+TGG | + | chr5.4:76534174-76534193 | MS.gene020886:CDS | 35.0% |
| !! | TAAATCAAATTTGCTGCTGC+AGG | + | chr5.4:76535045-76535064 | MS.gene020886:intron | 35.0% |
| !! | TAACAAGGAAGTGTTTCTCA+GGG | + | chr5.4:76531012-76531031 | MS.gene020886:CDS | 35.0% |
| !! | TCTCTTTTAAGAACACACCT+TGG | + | chr5.4:76531286-76531305 | MS.gene020886:intron | 35.0% |
| !! | TCTCTTTTAAGAGCTTACCT+TGG | + | chr5.4:76531146-76531165 | MS.gene020886:intron | 35.0% |
| !!! | ACAAATTTTGAGGTGTAGCT+TGG | - | chr5.4:76531664-76531683 | None:intergenic | 35.0% |
| !!! | AGTTTGTTGGTTTTACGTTG+TGG | + | chr5.4:76530411-76530430 | MS.gene020886:intron | 35.0% |
| !!! | ATTTGTTTTGGCAGGTTAGT+CGG | + | chr5.4:76530957-76530976 | MS.gene020886:intron | 35.0% |
| !!! | TTTGTAGGTGCTATTTTTGG+TGG | + | chr5.4:76534507-76534526 | MS.gene020886:intron | 35.0% |
| !!! | TTTTTTGTGTGGTTTGAAGG+TGG | + | chr5.4:76532344-76532363 | MS.gene020886:intron | 35.0% |
| AAATGAGACCCAACCTATCT+GGG | + | chr5.4:76533097-76533116 | MS.gene020886:CDS | 40.0% | |
| AACTAATCCTGACGATCAAG+AGG | + | chr5.4:76535281-76535300 | MS.gene020886:CDS | 40.0% | |
| AACTTGTGGCAATCTATTGG+GGG | - | chr5.4:76531328-76531347 | None:intergenic | 40.0% | |
| ACCTTTCTTGGAGAAACTTG+CGG | + | chr5.4:76534386-76534405 | MS.gene020886:CDS | 40.0% | |
| AGAATGGCAAAATCTTGGGA+AGG | + | chr5.4:76531447-76531466 | MS.gene020886:intron | 40.0% | |
| AGCAAAAAACACTACCTCTG+TGG | - | chr5.4:76533311-76533330 | None:intergenic | 40.0% | |
| AGCCGCATAGTAAGTAGATA+GGG | + | chr5.4:76533818-76533837 | MS.gene020886:intron | 40.0% | |
| AGTTACTCAAGAAGTCAAGC+TGG | - | chr5.4:76533646-76533665 | None:intergenic | 40.0% | |
| ATAGTAAGTAGATAGGGTGC+AGG | + | chr5.4:76533824-76533843 | MS.gene020886:intron | 40.0% | |
| ATAGTCCTACACACAGAACA+AGG | - | chr5.4:76534154-76534173 | None:intergenic | 40.0% | |
| ATCATCACACTTTACCACAG+AGG | + | chr5.4:76533294-76533313 | MS.gene020886:CDS | 40.0% | |
| ATTTCACGTGACACATTGAG+TGG | - | chr5.4:76533788-76533807 | None:intergenic | 40.0% | |
| ATTTGTCTCATTACAGGTGG+AGG | + | chr5.4:76532841-76532860 | MS.gene020886:intron | 40.0% | |
| CAAGACGTTTGTGATTCTCA+CGG | - | chr5.4:76534230-76534249 | None:intergenic | 40.0% | |
| CACCCTATCTACTTACTATG+CGG | - | chr5.4:76533823-76533842 | None:intergenic | 40.0% | |
| CAGCACACAAGATACATAAC+AGG | - | chr5.4:76532141-76532160 | None:intergenic | 40.0% | |
| CATAGGATCCAATTTCACAG+TGG | - | chr5.4:76535406-76535425 | None:intergenic | 40.0% | |
| CGAGAAAGATGAATACCGAA+TGG | - | chr5.4:76530122-76530141 | None:intergenic | 40.0% | |
| CTTGGAACTATTGCTCAAAG+TGG | + | chr5.4:76532034-76532053 | MS.gene020886:CDS | 40.0% | |
| CTTGTCGAATCTCTATGACA+TGG | - | chr5.4:76531609-76531628 | None:intergenic | 40.0% | |
| GAAAAGGAAAACCAGAACCA+AGG | - | chr5.4:76531166-76531185 | None:intergenic | 40.0% | |
| GAAATTTGAGTACCAAGCTG+AGG | + | chr5.4:76530869-76530888 | MS.gene020886:CDS | 40.0% | |
| GAATGGCAAAATCTTGGGAA+GGG | + | chr5.4:76531448-76531467 | MS.gene020886:intron | 40.0% | |
| GATGAGTAAAACCGAAGCAA+CGG | - | chr5.4:76534255-76534274 | None:intergenic | 40.0% | |
| GTAAATGGATCACATGCTAG+TGG | + | chr5.4:76535629-76535648 | MS.gene020886:intron | 40.0% | |
| GTACTTCTCAACAACAGTCT+TGG | - | chr5.4:76533060-76533079 | None:intergenic | 40.0% | |
| GTGGATTTACGGTAAGCTAT+TGG | + | chr5.4:76535349-76535368 | MS.gene020886:intron | 40.0% | |
| TAACGAATACTTGGAGCCAT+TGG | + | chr5.4:76533270-76533289 | MS.gene020886:CDS | 40.0% | |
| TACAGAGCCTGATCTAATGA+AGG | + | chr5.4:76531829-76531848 | MS.gene020886:CDS | 40.0% | |
| TACTCAAATTTCTCAGCTGG+TGG | - | chr5.4:76530861-76530880 | None:intergenic | 40.0% | |
| TAGCTCATATACCATAGCTG+AGG | + | chr5.4:76532428-76532447 | MS.gene020886:CDS | 40.0% | |
| TCAAACACTTCTGATGGAAG+AGG | + | chr5.4:76530460-76530479 | MS.gene020886:intron | 40.0% | |
| TCCTGATAATAGAGTGGTCA+GGG | - | chr5.4:76535145-76535164 | None:intergenic | 40.0% | |
| TCTATTGTACGATGCAGCTT+TGG | + | chr5.4:76535320-76535339 | MS.gene020886:CDS | 40.0% | |
| TGACATTAGCAAGGAAGACT+TGG | + | chr5.4:76534588-76534607 | MS.gene020886:CDS | 40.0% | |
| TGACTATGTCGGTACATCAT+AGG | - | chr5.4:76535423-76535442 | None:intergenic | 40.0% | |
| TGCAAAGAACACACCTTTCT+TGG | + | chr5.4:76534374-76534393 | MS.gene020886:CDS | 40.0% | |
| TGCGTGCTTAAAGTGGAAAT+TGG | + | chr5.4:76533147-76533166 | MS.gene020886:intron | 40.0% | |
| TGCTTCTATGTTGTGCATGA+AGG | + | chr5.4:76533923-76533942 | MS.gene020886:intron | 40.0% | |
| TGGATTGCAACCTCATCTAT+TGG | - | chr5.4:76534535-76534554 | None:intergenic | 40.0% | |
| TGGTACTCAAATTTCTCAGC+TGG | - | chr5.4:76530864-76530883 | None:intergenic | 40.0% | |
| TTAAGAACACACCTTGGTTC+TGG | + | chr5.4:76531292-76531311 | MS.gene020886:intron | 40.0% | |
| TTAAGAGCTTACCTTGGTTC+TGG | + | chr5.4:76531152-76531171 | MS.gene020886:intron | 40.0% | |
| TTACCTCAGTCTTCTCATCT+TGG | - | chr5.4:76532901-76532920 | None:intergenic | 40.0% | |
| TTATGCAGTGATACAGGCAT+TGG | + | chr5.4:76531983-76532002 | MS.gene020886:intron | 40.0% | |
| TTCAAATACATGCCGCTGTA+CGG | - | chr5.4:76534737-76534756 | None:intergenic | 40.0% | |
| TTCATGAATTCCATGCTAGC+GGG | - | chr5.4:76535098-76535117 | None:intergenic | 40.0% | |
| TTCCTGATAATAGAGTGGTC+AGG | - | chr5.4:76535146-76535165 | None:intergenic | 40.0% | |
| TTTGAACGCTAATGTGTTGG+TGG | + | chr5.4:76533439-76533458 | MS.gene020886:intron | 40.0% | |
| ! | AACCAAATTTTCCTGACACC+AGG | - | chr5.4:76534923-76534942 | None:intergenic | 40.0% |
| ! | ACACCTTCAATCAGAAGTGT+TGG | + | chr5.4:76530358-76530377 | MS.gene020886:intron | 40.0% |
| ! | AGACTGTTGTTGAGAAGTAC+TGG | + | chr5.4:76533060-76533079 | MS.gene020886:CDS | 40.0% |
| ! | AGTTTAGCTCGACAATTGAC+TGG | + | chr5.4:76534826-76534845 | MS.gene020886:CDS | 40.0% |
| ! | ATCCCTCTGAAAACAAGTCA+AGG | - | chr5.4:76532597-76532616 | None:intergenic | 40.0% |
| ! | GCTAATGAAGGCACAAACTA+TGG | + | chr5.4:76535067-76535086 | MS.gene020886:CDS | 40.0% |
| ! | GCTGATCGGGTATGTATTTT+TGG | + | chr5.4:76532258-76532277 | MS.gene020886:intron | 40.0% |
| ! | GTAAAGTGTGATGATGCCAA+TGG | - | chr5.4:76533289-76533308 | None:intergenic | 40.0% |
| ! | TGAGCGGACTCAAAATGATT+AGG | - | chr5.4:76535810-76535829 | None:intergenic | 40.0% |
| ! | TGGTGTCAGGAAAATTTGGT+TGG | + | chr5.4:76534922-76534941 | MS.gene020886:CDS | 40.0% |
| ! | TGTTTTCAGAGGGATGACAA+AGG | + | chr5.4:76532602-76532621 | MS.gene020886:intron | 40.0% |
| ! | TTTGGTGGATCCAATAGATG+AGG | + | chr5.4:76534522-76534541 | MS.gene020886:CDS | 40.0% |
| !! | AATCAGAAGTGTTGGTGCTA+TGG | + | chr5.4:76530366-76530385 | MS.gene020886:intron | 40.0% |
| !! | ATCAGAAGTGTTGGTGCTAT+GGG | + | chr5.4:76530367-76530386 | MS.gene020886:intron | 40.0% |
| !! | CTTGAGTTTTGTCAAAGGTG+TGG | + | chr5.4:76533745-76533764 | MS.gene020886:CDS | 40.0% |
| !! | GACTGTTGTTGAGAAGTACT+GGG | + | chr5.4:76533061-76533080 | MS.gene020886:CDS | 40.0% |
| !! | GATATACGAGATGATGGGTA+TGG | + | chr5.4:76535761-76535780 | MS.gene020886:CDS | 40.0% |
| !! | GGAAGTGTTAATCAGCTAAC+TGG | + | chr5.4:76530747-76530766 | MS.gene020886:CDS | 40.0% |
| !! | GGTGCTGACAACAACTTAAT+TGG | + | chr5.4:76532198-76532217 | MS.gene020886:CDS | 40.0% |
| !! | GTAACAAGGAAGTGTTTCTC+AGG | + | chr5.4:76531011-76531030 | MS.gene020886:CDS | 40.0% |
| !! | TGTTGAGAAGTACTGGGATT+GGG | + | chr5.4:76533067-76533086 | MS.gene020886:CDS | 40.0% |
| !! | TTGTTGAGAAGTACTGGGAT+TGG | + | chr5.4:76533066-76533085 | MS.gene020886:CDS | 40.0% |
| !!! | CTGCTTTTCTAGTTGCTGAT+CGG | + | chr5.4:76532244-76532263 | MS.gene020886:CDS | 40.0% |
| !!! | GTCCTTGACTTGTTTTCAGA+GGG | + | chr5.4:76532592-76532611 | MS.gene020886:intron | 40.0% |
| !!! | TGCTTTTCTAGTTGCTGATC+GGG | + | chr5.4:76532245-76532264 | MS.gene020886:CDS | 40.0% |
| !!! | TGTCCTTGACTTGTTTTCAG+AGG | + | chr5.4:76532591-76532610 | MS.gene020886:intron | 40.0% |
| AATACCGAATGGGAGTAAGC+AGG | - | chr5.4:76530111-76530130 | None:intergenic | 45.0% | |
| ACAAGCTTCTCAATCCTCTC+TGG | - | chr5.4:76532638-76532657 | None:intergenic | 45.0% | |
| ACACCTTAAGGTGCAGTGTA+AGG | - | chr5.4:76532491-76532510 | None:intergenic | 45.0% | |
| ACCCTGACCACTCTATTATC+AGG | + | chr5.4:76535141-76535160 | MS.gene020886:CDS | 45.0% | |
| ACTTCAGCCTCTACAGTTTC+TGG | - | chr5.4:76535849-76535868 | None:intergenic | 45.0% | |
| AGAAACTGTAGAGGCTGAAG+TGG | + | chr5.4:76535848-76535867 | MS.gene020886:CDS | 45.0% | |
| AGATGACTTCGATGGAGAAC+TGG | + | chr5.4:76533602-76533621 | MS.gene020886:CDS | 45.0% | |
| AGCAAGGAAGACTTGGATCT+AGG | + | chr5.4:76534595-76534614 | MS.gene020886:CDS | 45.0% | |
| ATTACGTCATCCTTCCCAGA+TGG | - | chr5.4:76533531-76533550 | None:intergenic | 45.0% | |
| ATTCCCTAGCCCTTGAAAAC+TGG | + | chr5.4:76532787-76532806 | MS.gene020886:intron | 45.0% | |
| CAAAAACCGCAGCTTATCCA+AGG | - | chr5.4:76531804-76531823 | None:intergenic | 45.0% | |
| CAAATGAGACCCAACCTATC+TGG | + | chr5.4:76533096-76533115 | MS.gene020886:CDS | 45.0% | |
| CAACCAAGATGAGAAGACTG+AGG | + | chr5.4:76532895-76532914 | MS.gene020886:CDS | 45.0% | |
| CAGGAACTAGTTGACTGTCT+TGG | + | chr5.4:76532016-76532035 | MS.gene020886:CDS | 45.0% | |
| CAGTAATGCAAGTGATGCCT+TGG | + | chr5.4:76531784-76531803 | MS.gene020886:intron | 45.0% | |
| CCTCTTGGAATCAACTTCTC+AGG | - | chr5.4:76532462-76532481 | None:intergenic | 45.0% | |
| CTATGTTGTGCATGAAGGTG+CGG | + | chr5.4:76533928-76533947 | MS.gene020886:intron | 45.0% | |
| CTTCAGCCTCTACAGTTTCT+GGG | - | chr5.4:76535848-76535867 | None:intergenic | 45.0% | |
| CTTCGATGGAGAACTGGTAT+AGG | + | chr5.4:76533608-76533627 | MS.gene020886:intron | 45.0% | |
| GAAAGGGAAAACCAGAACCA+AGG | - | chr5.4:76531306-76531325 | None:intergenic | 45.0% | |
| GACATGGTACTGTGTTTGAG+CGG | - | chr5.4:76535826-76535845 | None:intergenic | 45.0% | |
| GACCACACACATACGAAAGA+CGG | - | chr5.4:76530900-76530919 | None:intergenic | 45.0% | |
| GAGCCGCATAGTAAGTAGAT+AGG | + | chr5.4:76533817-76533836 | MS.gene020886:intron | 45.0% | |
| GCAATATGTTTGGGAAGGAG+AGG | + | chr5.4:76532398-76532417 | MS.gene020886:CDS | 45.0% | |
| GCACCAACACTTCTGATTGA+AGG | - | chr5.4:76530364-76530383 | None:intergenic | 45.0% | |
| TATCCAACCCGTGTTAGTGT+GGG | - | chr5.4:76535523-76535542 | None:intergenic | 45.0% | |
| TCCGCAAGTTTCTCCAAGAA+AGG | - | chr5.4:76534390-76534409 | None:intergenic | 45.0% | |
| TCTTGTAGAGAGAGAGAGAG+AGG | - | chr5.4:76531382-76531401 | None:intergenic | 45.0% | |
| TGCAGGGTGAGGTAGAATTT+AGG | + | chr5.4:76533478-76533497 | MS.gene020886:intron | 45.0% | |
| TGCATGATGCGTGCTTAAAG+TGG | + | chr5.4:76533140-76533159 | MS.gene020886:intron | 45.0% | |
| TGGCAATCTATTGGGGGAAA+GGG | - | chr5.4:76531322-76531341 | None:intergenic | 45.0% | |
| TTAAGCACGCATCATGCAGT+TGG | - | chr5.4:76533138-76533157 | None:intergenic | 45.0% | |
| TTCACCTGCTTACTCCCATT+CGG | + | chr5.4:76530104-76530123 | MS.gene020886:CDS | 45.0% | |
| ! | AAGGTTTTGCTCATCCAGAG+AGG | + | chr5.4:76532621-76532640 | MS.gene020886:CDS | 45.0% |
| ! | CAATAGGATAGTAAGGGTGC+TGG | + | chr5.4:76532177-76532196 | MS.gene020886:intron | 45.0% |
| ! | CCTGAGAAGTTGATTCCAAG+AGG | + | chr5.4:76532459-76532478 | MS.gene020886:CDS | 45.0% |
| ! | GATGCAGCTTTGGTTTCAAG+TGG | + | chr5.4:76535330-76535349 | MS.gene020886:CDS | 45.0% |
| ! | GTATGGCTCTTGGTGGTAAA+TGG | + | chr5.4:76535778-76535797 | MS.gene020886:CDS | 45.0% |
| ! | GTCCTGGTGTCAGGAAAATT+TGG | + | chr5.4:76534918-76534937 | MS.gene020886:CDS | 45.0% |
| ! | TGTATCTTGTGTGCTGACGA+AGG | + | chr5.4:76532145-76532164 | MS.gene020886:intron | 45.0% |
| !! | AGGCATTGGTATGACTAAGC+AGG | + | chr5.4:76531997-76532016 | MS.gene020886:CDS | 45.0% |
| !! | ATTACAGGTGGAGGTTGATG+AGG | + | chr5.4:76532850-76532869 | MS.gene020886:intron | 45.0% |
| !! | ATTTGGTTGGTCTGCGAACA+TGG | + | chr5.4:76534935-76534954 | MS.gene020886:CDS | 45.0% |
| !! | CTTCTGATGGAAGAGGTGTT+TGG | + | chr5.4:76530467-76530486 | MS.gene020886:intron | 45.0% |
| !! | TCAGAAGTGTTGGTGCTATG+GGG | + | chr5.4:76530368-76530387 | MS.gene020886:intron | 45.0% |
| !! | TTTTGATTGCCAGCCTCAGT+AGG | - | chr5.4:76535879-76535898 | None:intergenic | 45.0% |
| !! | TTGTTTATTTATTTATTTAT+TGG | + | chr5.4:76534467-76534486 | MS.gene020886:intron | 5.0% |
| AACGTCTTGCTCCGTTGCTT+CGG | + | chr5.4:76534241-76534260 | MS.gene020886:CDS | 50.0% | |
| AAGACGGCAATACCTCAGCT+TGG | - | chr5.4:76530884-76530903 | None:intergenic | 50.0% | |
| AGGATCTGTCTCCTCAGCTA+TGG | - | chr5.4:76532442-76532461 | None:intergenic | 50.0% | |
| AGGTGCGGATCATGAGGAAA+CGG | + | chr5.4:76533943-76533962 | MS.gene020886:intron | 50.0% | |
| AGTGTAAGGCGAGTTCCTCT+TGG | - | chr5.4:76532477-76532496 | None:intergenic | 50.0% | |
| ATCCATGAGCGACAACAGAG+AGG | + | chr5.4:76534001-76534020 | MS.gene020886:CDS | 50.0% | |
| ATCTTTCCTCCAAGCTGTGC+TGG | - | chr5.4:76535744-76535763 | None:intergenic | 50.0% | |
| CACGTGACACATTGAGTGGA+AGG | - | chr5.4:76533784-76533803 | None:intergenic | 50.0% | |
| CCAAGCTGTGCTGGATTATC+AGG | - | chr5.4:76535735-76535754 | None:intergenic | 50.0% | |
| CCATGTCCCAGAAACTGTAG+AGG | + | chr5.4:76535839-76535858 | MS.gene020886:CDS | 50.0% | |
| CCTGATAATCCAGCACAGCT+TGG | + | chr5.4:76535732-76535751 | MS.gene020886:CDS | 50.0% | |
| CTTGGAGAAACTTGCGGAGA+AGG | + | chr5.4:76534392-76534411 | MS.gene020886:CDS | 50.0% | |
| GAGGTGTAGCTTGGTCACAA+GGG | - | chr5.4:76531655-76531674 | None:intergenic | 50.0% | |
| GATAATCCAGCACAGCTTGG+AGG | + | chr5.4:76535735-76535754 | MS.gene020886:CDS | 50.0% | |
| GTATCCAACCCGTGTTAGTG+TGG | - | chr5.4:76535524-76535543 | None:intergenic | 50.0% | |
| GTCAGTGTCCCACACTAACA+CGG | + | chr5.4:76535512-76535531 | MS.gene020886:intron | 50.0% | |
| GTGATGCCTTGGATAAGCTG+CGG | + | chr5.4:76531795-76531814 | MS.gene020886:CDS | 50.0% | |
| GTGGCAATCTATTGGGGGAA+AGG | - | chr5.4:76531323-76531342 | None:intergenic | 50.0% | |
| TACACACAGAACAAGGCAGC+TGG | - | chr5.4:76534147-76534166 | None:intergenic | 50.0% | |
| TACCTCTCTGTTGTCGCTCA+TGG | - | chr5.4:76534006-76534025 | None:intergenic | 50.0% | |
| TCAGTGTCCCACACTAACAC+GGG | + | chr5.4:76535513-76535532 | MS.gene020886:intron | 50.0% | |
| TCGCCTTACACTGCACCTTA+AGG | + | chr5.4:76532485-76532504 | MS.gene020886:CDS | 50.0% | |
| TGAGGTGTAGCTTGGTCACA+AGG | - | chr5.4:76531656-76531675 | None:intergenic | 50.0% | |
| TGCCGTCTTTCGTATGTGTG+TGG | + | chr5.4:76530895-76530914 | MS.gene020886:intron | 50.0% | |
| TGGGAGTAAGCAGGTGAAAG+TGG | - | chr5.4:76530102-76530121 | None:intergenic | 50.0% | |
| TTGCTGCTGCAGGCTAATGA+AGG | + | chr5.4:76535055-76535074 | MS.gene020886:intron | 50.0% | |
| TTTCCTGACACCAGGACACA+AGG | - | chr5.4:76534915-76534934 | None:intergenic | 50.0% | |
| TTTGCCAGTATGCCGTACAG+CGG | + | chr5.4:76534722-76534741 | MS.gene020886:intron | 50.0% | |
| ! | AGCTGCCTTGTTCTGTGTGT+AGG | + | chr5.4:76534146-76534165 | MS.gene020886:intron | 50.0% |
| ! | GAGGAAACGGTTGGTCAGAA+AGG | + | chr5.4:76533956-76533975 | MS.gene020886:CDS | 50.0% |
| ! | GTTGGTCTGCGAACATGGAA+AGG | + | chr5.4:76534940-76534959 | MS.gene020886:CDS | 50.0% |
| !! | AATGTGTTGGTGGCACTTGG+TGG | + | chr5.4:76533449-76533468 | MS.gene020886:intron | 50.0% |
| !! | ACGTCCAGTTTTCAAGGGCT+AGG | - | chr5.4:76532794-76532813 | None:intergenic | 50.0% |
| !! | ATGATGGGTATGGCTCTTGG+TGG | + | chr5.4:76535771-76535790 | MS.gene020886:CDS | 50.0% |
| !! | CACTTGGTGGTGATGTTGCA+GGG | + | chr5.4:76533462-76533481 | MS.gene020886:intron | 50.0% |
| !! | CCTCTACAGTTTCTGGGACA+TGG | - | chr5.4:76535842-76535861 | None:intergenic | 50.0% |
| !! | CGTCCAGTTTTCAAGGGCTA+GGG | - | chr5.4:76532793-76532812 | None:intergenic | 50.0% |
| !! | GAGATGATGGGTATGGCTCT+TGG | + | chr5.4:76535768-76535787 | MS.gene020886:CDS | 50.0% |
| !! | GCTAATGTGTTGGTGGCACT+TGG | + | chr5.4:76533446-76533465 | MS.gene020886:intron | 50.0% |
| !! | GGAAGAGGTGTTTGGTGTCA+AGG | + | chr5.4:76530475-76530494 | MS.gene020886:intron | 50.0% |
| !! | TTGTCCTTTTTCGCCTCAGC+TGG | - | chr5.4:76532878-76532897 | None:intergenic | 50.0% |
| !! | TTTGGTGTCAAGGTCGTGTC+TGG | + | chr5.4:76530485-76530504 | MS.gene020886:intron | 50.0% |
| ATCCTTCCCAGATGGAGCGT+AGG | - | chr5.4:76533523-76533542 | None:intergenic | 55.0% | |
| CTTAGGGCCTCTTGATCGTC+AGG | - | chr5.4:76535291-76535310 | None:intergenic | 55.0% | |
| GCGGATCATGAGGAAACGGT+TGG | + | chr5.4:76533947-76533966 | MS.gene020886:CDS | 55.0% | |
| GGATCCAGCTGAGGCGAAAA+AGG | + | chr5.4:76532871-76532890 | MS.gene020886:CDS | 55.0% | |
| TATGGGTGATCCCGCTAGCA+TGG | + | chr5.4:76535085-76535104 | MS.gene020886:CDS | 55.0% | |
| TGAAGTGGTCGAGCCTACTG+AGG | + | chr5.4:76535863-76535882 | MS.gene020886:CDS | 55.0% | |
| TGTCCCACACTAACACGGGT+TGG | + | chr5.4:76535517-76535536 | MS.gene020886:intron | 55.0% | |
| TTCCTGCCTACGCTCCATCT+GGG | + | chr5.4:76533514-76533533 | MS.gene020886:CDS | 55.0% | |
| ! | GCATGAAGGTGCGGATCATG+AGG | + | chr5.4:76533937-76533956 | MS.gene020886:intron | 55.0% |
| ! | TTGGCAGGTTAGTCGGCTCA+TGG | + | chr5.4:76530964-76530983 | MS.gene020886:intron | 55.0% |
| !! | GCACTTGGTGGTGATGTTGC+AGG | + | chr5.4:76533461-76533480 | MS.gene020886:intron | 55.0% |
| !! | GGTTGATGAGGATCCAGCTG+AGG | + | chr5.4:76532862-76532881 | MS.gene020886:CDS | 55.0% |
| CATGCCGCTGTACGGCATAC+TGG | - | chr5.4:76534729-76534748 | None:intergenic | 60.0% | |
| GAGCTCTTCGCCTTGTGTCC+TGG | + | chr5.4:76534902-76534921 | MS.gene020886:CDS | 60.0% | |
| GTCTCCGCCCTTCTCCGTTA+CGG | + | chr5.4:76530045-76530064 | MS.gene020886:CDS | 60.0% | |
| GTTCCTGCCTACGCTCCATC+TGG | + | chr5.4:76533513-76533532 | MS.gene020886:CDS | 60.0% | |
| TCGCCTTGTGTCCTGGTGTC+AGG | + | chr5.4:76534909-76534928 | MS.gene020886:CDS | 60.0% | |
| TGCCTACGCTCCATCTGGGA+AGG | + | chr5.4:76533518-76533537 | MS.gene020886:CDS | 60.0% | |
| TGCTGACGTGTGTCAGACGC+TGG | + | chr5.4:76530333-76530352 | MS.gene020886:intron | 60.0% | |
| TTCCCAGATGGAGCGTAGGC+AGG | - | chr5.4:76533519-76533538 | None:intergenic | 60.0% | |
| ! | GGTGGTGATGTTGCAGGGTG+AGG | + | chr5.4:76533467-76533486 | MS.gene020886:intron | 60.0% |
| ! | GTAACGGAGAAGGGCGGAGA+CGG | - | chr5.4:76530046-76530065 | None:intergenic | 60.0% |
| !! | GGAGACGGAGGAAGAGCGTT+TGG | - | chr5.4:76530031-76530050 | None:intergenic | 60.0% |
| GTGGTCGAGCCTACTGAGGC+TGG | + | chr5.4:76535867-76535886 | MS.gene020886:CDS | 65.0% | |
| TCCGCCCTTCTCCGTTACGG+CGG | + | chr5.4:76530048-76530067 | MS.gene020886:CDS | 65.0% | |
| ! | TGCGCCGCCGTAACGGAGAA+GGG | - | chr5.4:76530055-76530074 | None:intergenic | 65.0% |
| ACGGAGAAGGGCGGAGACGG+AGG | - | chr5.4:76530043-76530062 | None:intergenic | 70.0% | |
| CGCGAAGTGCGCCGCCGTAA+CGG | - | chr5.4:76530062-76530081 | None:intergenic | 70.0% | |
| CGTTACGGCGGCGCACTTCG+CGG | + | chr5.4:76530060-76530079 | MS.gene020886:CDS | 70.0% | |
| ! | GCCGCCGTAACGGAGAAGGG+CGG | - | chr5.4:76530052-76530071 | None:intergenic | 70.0% |
| ! | GTGCGCCGCCGTAACGGAGA+AGG | - | chr5.4:76530056-76530075 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 76530015 | 76535902 | 76530015 | ID=MS.gene020886 |
| chr5.4 | mRNA | 76530015 | 76535902 | 76530015 | ID=MS.gene020886.t1;Parent=MS.gene020886 |
| chr5.4 | exon | 76530015 | 76530125 | 76530015 | ID=MS.gene020886.t1.exon1;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76530015 | 76530125 | 76530015 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76530690 | 76530890 | 76530690 | ID=MS.gene020886.t1.exon2;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76530690 | 76530890 | 76530690 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76530971 | 76531044 | 76530971 | ID=MS.gene020886.t1.exon3;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76530971 | 76531044 | 76530971 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76531787 | 76531912 | 76531787 | ID=MS.gene020886.t1.exon4;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76531787 | 76531912 | 76531787 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76531991 | 76532084 | 76531991 | ID=MS.gene020886.t1.exon5;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76531991 | 76532084 | 76531991 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76532183 | 76532266 | 76532183 | ID=MS.gene020886.t1.exon6;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76532183 | 76532266 | 76532183 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76532363 | 76532506 | 76532363 | ID=MS.gene020886.t1.exon7;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76532363 | 76532506 | 76532363 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76532611 | 76532724 | 76532611 | ID=MS.gene020886.t1.exon8;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76532611 | 76532724 | 76532611 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76532857 | 76532916 | 76532857 | ID=MS.gene020886.t1.exon9;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76532857 | 76532916 | 76532857 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76533044 | 76533118 | 76533044 | ID=MS.gene020886.t1.exon10;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76533044 | 76533118 | 76533044 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76533211 | 76533315 | 76533211 | ID=MS.gene020886.t1.exon11;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76533211 | 76533315 | 76533211 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76533483 | 76533623 | 76533483 | ID=MS.gene020886.t1.exon12;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76533483 | 76533623 | 76533483 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76533734 | 76533826 | 76533734 | ID=MS.gene020886.t1.exon13;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76533734 | 76533826 | 76533734 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76533945 | 76534022 | 76533945 | ID=MS.gene020886.t1.exon14;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76533945 | 76534022 | 76533945 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76534168 | 76534422 | 76534168 | ID=MS.gene020886.t1.exon15;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76534168 | 76534422 | 76534168 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76534514 | 76534616 | 76534514 | ID=MS.gene020886.t1.exon16;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76534514 | 76534616 | 76534514 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76534787 | 76534961 | 76534787 | ID=MS.gene020886.t1.exon17;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76534787 | 76534961 | 76534787 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76535067 | 76535172 | 76535067 | ID=MS.gene020886.t1.exon18;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76535067 | 76535172 | 76535067 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76535270 | 76535359 | 76535270 | ID=MS.gene020886.t1.exon19;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76535270 | 76535359 | 76535270 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| chr5.4 | exon | 76535732 | 76535902 | 76535732 | ID=MS.gene020886.t1.exon20;Parent=MS.gene020886.t1 |
| chr5.4 | CDS | 76535732 | 76535902 | 76535732 | ID=cds.MS.gene020886.t1;Parent=MS.gene020886.t1 |
| Gene Sequence |
| Protein sequence |
