Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64023.t1 | XP_003589505.1 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.00E+00 | 1404.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64023.t1 | P35016 | 87.9 | 782 | 94 | 1 | 1 | 781 | 1 | 782 | 0.0e+00 | 1247.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64023.t1 | G7I7Q4 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.0e+00 | 1404.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene64023 | 0.802688 | 4.98E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene64023 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene64023 | 0.802084 | 6.64E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene64023 | 0.830977 | 2.17E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene64023 | 0.830802 | 2.39E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene64023 | 0.81905 | 1.42E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene64023 | 0.847748 | 9.50E-60 | -1.69E-46 |
| MS.gene051120 | MS.gene64023 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene64023 | 0.821056 | 4.95E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene64023 | 0.821836 | 3.27E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene64023 | 0.869676 | 2.59E-66 | -1.69E-46 |
| MS.gene051757 | MS.gene64023 | 0.819592 | 1.07E-52 | -1.69E-46 |
| MS.gene053094 | MS.gene64023 | 0.816586 | 5.12E-52 | -1.69E-46 |
| MS.gene053151 | MS.gene64023 | 0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene053647 | MS.gene64023 | 0.803598 | 3.23E-49 | -1.69E-46 |
| MS.gene05410 | MS.gene64023 | 0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene64023 | 0.800855 | 1.18E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene64023 | 0.847345 | 1.23E-59 | -1.69E-46 |
| MS.gene05468 | MS.gene64023 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene64023 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene058543 | MS.gene64023 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene64023 | 0.842773 | 2.11E-58 | -1.69E-46 |
| MS.gene060697 | MS.gene64023 | 0.842781 | 2.10E-58 | -1.69E-46 |
| MS.gene060840 | MS.gene64023 | 0.804382 | 2.22E-49 | -1.69E-46 |
| MS.gene06113 | MS.gene64023 | 0.811811 | 5.81E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020834 | MS.gene64023 | PPI |
| MS.gene58998 | MS.gene64023 | PPI |
| MS.gene38262 | MS.gene64023 | PPI |
| MS.gene59310 | MS.gene64023 | PPI |
| MS.gene37989 | MS.gene64023 | PPI |
| MS.gene75389 | MS.gene64023 | PPI |
| MS.gene026627 | MS.gene64023 | PPI |
| MS.gene38261 | MS.gene64023 | PPI |
| MS.gene029690 | MS.gene64023 | PPI |
| MS.gene62607 | MS.gene64023 | PPI |
| MS.gene37988 | MS.gene64023 | PPI |
| MS.gene040499 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene061126 | PPI |
| MS.gene33593 | MS.gene64023 | PPI |
| MS.gene020833 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene75388 | PPI |
| MS.gene38210 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene60613 | PPI |
| MS.gene020886 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene62123 | PPI |
| MS.gene81285 | MS.gene64023 | PPI |
| MS.gene63007 | MS.gene64023 | PPI |
| MS.gene026628 | MS.gene64023 | PPI |
| MS.gene81288 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene006231 | PPI |
| MS.gene81227 | MS.gene64023 | PPI |
| MS.gene38049 | MS.gene64023 | PPI |
| MS.gene49154 | MS.gene64023 | PPI |
| MS.gene64023 | MS.gene30654 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64023.t1 | MTR_1g025430 | 99.511 | 818 | 4 | 0 | 1 | 818 | 1 | 818 | 0.0 | 1644 |
| MS.gene64023.t1 | MTR_6g452990 | 49.508 | 711 | 317 | 7 | 75 | 780 | 2 | 675 | 0.0 | 648 |
| MS.gene64023.t1 | MTR_1g099840 | 47.743 | 731 | 327 | 9 | 75 | 799 | 7 | 688 | 0.0 | 635 |
| MS.gene64023.t1 | MTR_5g096430 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene64023.t1 | MTR_5g096460 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene64023.t1 | MTR_5g097320 | 46.164 | 743 | 345 | 15 | 77 | 804 | 89 | 791 | 0.0 | 597 |
| MS.gene64023.t1 | MTR_0009s0390 | 44.912 | 737 | 352 | 15 | 76 | 801 | 80 | 773 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64023.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1244 |
| MS.gene64023.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1243 |
| MS.gene64023.t1 | AT5G52640 | 49.041 | 730 | 330 | 8 | 75 | 799 | 2 | 694 | 0.0 | 648 |
| MS.gene64023.t1 | AT5G56000 | 47.765 | 716 | 333 | 7 | 75 | 786 | 2 | 680 | 0.0 | 627 |
| MS.gene64023.t1 | AT5G56010 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 617 |
| MS.gene64023.t1 | AT5G56030 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 616 |
| MS.gene64023.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64023.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64023.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64023.t1 | AT2G04030 | 45.200 | 750 | 338 | 17 | 75 | 799 | 74 | 775 | 0.0 | 602 |
| MS.gene64023.t1 | AT5G56030 | 46.049 | 734 | 326 | 8 | 75 | 775 | 2 | 698 | 0.0 | 601 |
| MS.gene64023.t1 | AT2G04030 | 45.067 | 750 | 336 | 17 | 75 | 799 | 74 | 772 | 0.0 | 598 |
Find 171 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGGTAAAGAATT+TGG | 0.100722 | 1.3:+937267 | MS.gene64023:CDS |
| CCTTACTGATAAAGACATTT+TGG | 0.114774 | 1.3:+936796 | MS.gene64023:CDS |
| CTCAATCTAATTGGGCAATT+TGG | 0.152816 | 1.3:+937439 | MS.gene64023:CDS |
| GACCCTCCTTGGACACATTT+TGG | 0.171757 | 1.3:-940001 | None:intergenic |
| TTAACTTCCCTATCTATATC+TGG | 0.204471 | 1.3:+938295 | MS.gene64023:CDS |
| AGCTGAAGTTTCAAGGCTTA+TGG | 0.218402 | 1.3:+936271 | MS.gene64023:CDS |
| AGTGGTGATCTCAATCTAAT+TGG | 0.239122 | 1.3:+937430 | MS.gene64023:CDS |
| TTCATCTTCACTTTCCTCCT+TGG | 0.262279 | 1.3:-938524 | None:intergenic |
| TCATCTTCACTTTCCTCCTT+GGG | 0.274450 | 1.3:-938523 | None:intergenic |
| TCTTCCTCTGTAACCTCCTT+TGG | 0.284101 | 1.3:-938658 | None:intergenic |
| GAGGATTTGGTAAAGAATTT+GGG | 0.292920 | 1.3:+937268 | MS.gene64023:CDS |
| CAATTCACTTTACAGTAATA+AGG | 0.298653 | 1.3:+936304 | MS.gene64023:CDS |
| ACCAAGTTCTGGAATGAGTT+TGG | 0.314376 | 1.3:+939480 | MS.gene64023:CDS |
| TTGCTTCCCCAGATATAGAT+AGG | 0.331375 | 1.3:-938303 | None:intergenic |
| TGCATCAAGTATTCATCAAC+TGG | 0.336633 | 1.3:-939948 | None:intergenic |
| CCACTTAGTTAGATCCTTGA+AGG | 0.361563 | 1.3:-940066 | None:intergenic |
| TGGTATGACAAAGGAGGATT+TGG | 0.366719 | 1.3:+937255 | MS.gene64023:CDS |
| ATCTGACTTTCAGGTATGTA+TGG | 0.368320 | 1.3:+937624 | MS.gene64023:intron |
| CCCGAGTTTCAGACCCTCCT+TGG | 0.369926 | 1.3:-940012 | None:intergenic |
| CTCGTCTAACATACAACTTC+AGG | 0.373088 | 1.3:-938956 | None:intergenic |
| GTAGTGGTGACATCAAAATT+TGG | 0.373244 | 1.3:+940161 | MS.gene64023:CDS |
| CTTCTTCTTCTCGCAGATCA+AGG | 0.377003 | 1.3:+935784 | MS.gene64023:CDS |
| GAGGTCAATACACCAAGTTC+TGG | 0.382290 | 1.3:+939469 | MS.gene64023:CDS |
| TCTTTGTCAGTGGACTCGTC+AGG | 0.385604 | 1.3:-939265 | None:intergenic |
| TAAATGATGTGAAGGCTATA+TGG | 0.388507 | 1.3:+938626 | MS.gene64023:CDS |
| TCCAAACTCATTCCAGAACT+TGG | 0.392555 | 1.3:-939481 | None:intergenic |
| TACAAGTCCTGAGGTGCTTT+AGG | 0.402740 | 1.3:-938903 | None:intergenic |
| AGTTTCAAGCTGAAGTTTCA+AGG | 0.404580 | 1.3:+936264 | MS.gene64023:CDS |
| TTGGGTACCATAGCAAAATC+TGG | 0.405084 | 1.3:+937286 | MS.gene64023:CDS |
| TGTAGGCACTGGACAAGATT+AGG | 0.406249 | 1.3:+936765 | MS.gene64023:intron |
| TCCCGGAGTTCCTTGATGAT+AGG | 0.409122 | 1.3:-940290 | None:intergenic |
| GGTCCTCTTCGGCAAGCTTA+CGG | 0.422206 | 1.3:-939243 | None:intergenic |
| ACTCGCTGGCCTCTTCTTTG+AGG | 0.426467 | 1.3:-937730 | None:intergenic |
| CCAAAATGTCTTTATCAGTA+AGG | 0.426746 | 1.3:-936796 | None:intergenic |
| GTAAAGTGGCTCCATGATAA+AGG | 0.427105 | 1.3:-938837 | None:intergenic |
| GTGCTTTAGGTGGCACATAA+AGG | 0.430754 | 1.3:-938890 | None:intergenic |
| TGGAACCAGCAAAGAACAAC+TGG | 0.432951 | 1.3:+939758 | MS.gene64023:CDS |
| GCGATGACAAACCTTTATCA+TGG | 0.434104 | 1.3:+938826 | MS.gene64023:CDS |
| TCCTCCTCAACTGTTGCATC+AGG | 0.444473 | 1.3:-940561 | None:intergenic |
| TCTTATCTTCATAATCCATC+AGG | 0.444687 | 1.3:-939974 | None:intergenic |
| TCTATTAGAGACAGAGGTAT+TGG | 0.445475 | 1.3:+937235 | MS.gene64023:CDS |
| ATAGCAAAATCTGGAACTTC+AGG | 0.446829 | 1.3:+937295 | MS.gene64023:CDS |
| CAACGCCAAGCTTGAAATCC+AGG | 0.454983 | 1.3:+936829 | MS.gene64023:CDS |
| TAACTTCCCTATCTATATCT+GGG | 0.461417 | 1.3:+938296 | MS.gene64023:CDS |
| ATTTCTCGTGATACATTCAA+TGG | 0.461649 | 1.3:-939154 | None:intergenic |
| CCAAGGAGGGTCTGAAACTC+GGG | 0.464941 | 1.3:+940012 | MS.gene64023:CDS |
| GCGAAGGGATCTCTTCGAAA+TGG | 0.469049 | 1.3:-936222 | None:intergenic |
| TTCTAAAGACAAGGAACTAA+AGG | 0.470485 | 1.3:+940040 | MS.gene64023:CDS |
| ACAAACCTGGATTTCAAGCT+TGG | 0.470570 | 1.3:-936834 | None:intergenic |
| TTTGGAAAATCTATTAAACT+TGG | 0.471577 | 1.3:+939498 | MS.gene64023:CDS |
| TACCTCTGTCTCTAATAGAT+AGG | 0.475363 | 1.3:-937231 | None:intergenic |
| GAGAGAAGAAGAAGAGTGGA+AGG | 0.480182 | 1.3:-935757 | None:intergenic |
| TCCAAGGAGGGTCTGAAACT+CGG | 0.480470 | 1.3:+940011 | MS.gene64023:CDS |
| CTAATTGGGCAATTTGGAGT+TGG | 0.481464 | 1.3:+937445 | MS.gene64023:CDS |
| AATTCTAGAAGCAAAATCCT+TGG | 0.482964 | 1.3:-940505 | None:intergenic |
| GGAACTAAAGGAATCCTTCA+AGG | 0.484459 | 1.3:+940052 | MS.gene64023:CDS |
| CCCGGAGTTCCTTGATGATA+GGG | 0.484538 | 1.3:-940289 | None:intergenic |
| CCTCTTGACAACATCTGAAT+CGG | 0.488306 | 1.3:-936095 | None:intergenic |
| TTGCAATTTCAGAAGATACA+TGG | 0.492822 | 1.3:+937669 | MS.gene64023:CDS |
| CATCTTCACTTTCCTCCTTG+GGG | 0.498254 | 1.3:-938522 | None:intergenic |
| CAAGCTTACGGATCATATCA+AGG | 0.500174 | 1.3:-939231 | None:intergenic |
| GTGGTGATCTCAATCTAATT+GGG | 0.500326 | 1.3:+937431 | MS.gene64023:CDS |
| CTTTGTCAGTGGACTCGTCA+GGG | 0.500986 | 1.3:-939264 | None:intergenic |
| TTCTTCAGACGCTCAAGGAA+TGG | 0.506178 | 1.3:-939789 | None:intergenic |
| AAGAGAGAGAAGAAGAAGAG+TGG | 0.506230 | 1.3:-935761 | None:intergenic |
| CACAAGGAGTGTTATCCAAT+CGG | 0.507998 | 1.3:-940139 | None:intergenic |
| ATTCTAGAAGCAAAATCCTT+GGG | 0.509254 | 1.3:-940504 | None:intergenic |
| CGACGAGTCTTCTGAGGAAG+AGG | 0.516292 | 1.3:+938359 | MS.gene64023:CDS |
| TGGTGGATCTACTACTTCAT+CGG | 0.517594 | 1.3:-936029 | None:intergenic |
| TCATCAGCTTCGTTTGAAGC+AGG | 0.518350 | 1.3:-940630 | None:intergenic |
| GACTCGTCGTCTTCATCAGC+GGG | 0.518353 | 1.3:-938345 | None:intergenic |
| CTGTCATTGCAATGAGGAAG+TGG | 0.518703 | 1.3:+935728 | None:intergenic |
| ATTTGGTTGGAGTGCAAACA+TGG | 0.519357 | 1.3:+940178 | MS.gene64023:CDS |
| CACTTTCGAAAAGTGCAGTC+TGG | 0.519596 | 1.3:-940464 | None:intergenic |
| TGATAAACGATTTCTGTTGG+TGG | 0.522059 | 1.3:-939535 | None:intergenic |
| CATCGACATTGTCATTTGCA+AGG | 0.523230 | 1.3:-940100 | None:intergenic |
| TACATATCTAGAATGAAAGC+TGG | 0.527032 | 1.3:+939711 | MS.gene64023:CDS |
| CAAAATGTCTTTATCAGTAA+GGG | 0.527688 | 1.3:-936795 | None:intergenic |
| GGAAGATGAGACTGAAGTTG+AGG | 0.531983 | 1.3:+940581 | MS.gene64023:CDS |
| CCCTATCATCAAGGAACTCC+GGG | 0.533736 | 1.3:+940289 | MS.gene64023:CDS |
| TGTGCCACCTAAAGCACCTC+AGG | 0.535240 | 1.3:+938896 | MS.gene64023:CDS |
| GATGCAGATTAAGTTAGATA+AGG | 0.535990 | 1.3:+937198 | MS.gene64023:intron |
| TGTCTTTATCAGTAAGGGAT+AGG | 0.536994 | 1.3:-936790 | None:intergenic |
| CATCACCTTCAGCAGTAAAG+TGG | 0.538199 | 1.3:-938851 | None:intergenic |
| GTATGGGAATCTAAAGCTGA+TGG | 0.541849 | 1.3:+937641 | MS.gene64023:CDS |
| ACCCTATCATCAAGGAACTC+CGG | 0.542750 | 1.3:+940288 | MS.gene64023:CDS |
| TATTAAACTTGGTATCATTG+AGG | 0.544026 | 1.3:+939509 | MS.gene64023:CDS |
| ATACTCTTCCACGTACTCGC+TGG | 0.546272 | 1.3:-937744 | None:intergenic |
| GGATGAGAGTGTGAAGCAAA+CGG | 0.547097 | 1.3:+940428 | MS.gene64023:intron |
| AAGCATACATGCGCGGCAAG+AGG | 0.548258 | 1.3:+940243 | MS.gene64023:CDS |
| AAACTCGGTGCTGTTCCTCA+TGG | 0.549531 | 1.3:+936064 | MS.gene64023:CDS |
| TGGTGACATCAAAATTTGGT+TGG | 0.549849 | 1.3:+940165 | MS.gene64023:CDS |
| GGACTCGTCAGGGTCCTCTT+CGG | 0.550477 | 1.3:-939254 | None:intergenic |
| ATCGACATTGTCATTTGCAA+GGG | 0.551505 | 1.3:-940099 | None:intergenic |
| AGAAGAGGCCAGCGAGTACG+TGG | 0.552899 | 1.3:+937736 | MS.gene64023:CDS |
| GATCCGTAAGCTTGCCGAAG+AGG | 0.555543 | 1.3:+939240 | MS.gene64023:CDS |
| TGCTTCCCCAGATATAGATA+GGG | 0.556945 | 1.3:-938302 | None:intergenic |
| AGCATACATGCGCGGCAAGA+GGG | 0.557652 | 1.3:+940244 | MS.gene64023:CDS |
| TTTCTTGTTGAATGATCCCA+AGG | 0.558398 | 1.3:+940488 | MS.gene64023:CDS |
| TGTGAAGATATCCAACCGAT+TGG | 0.558827 | 1.3:+940124 | MS.gene64023:CDS |
| AGGAGTGTTATCCAATCGGT+TGG | 0.561154 | 1.3:-940135 | None:intergenic |
| TGTGTGTGAATGAAGGGAAT+CGG | 0.561471 | 1.3:+936196 | MS.gene64023:intron |
| TAGAATGAAAGCTGGACAGA+AGG | 0.562025 | 1.3:+939719 | MS.gene64023:CDS |
| GAAGTTCCAAAATGTGTCCA+AGG | 0.562529 | 1.3:+939995 | MS.gene64023:CDS |
| TCCACTGACAAAGAAAAGAA+AGG | 0.563357 | 1.3:+939274 | MS.gene64023:CDS |
| TGGAGCCACTTTACTGCTGA+AGG | 0.565774 | 1.3:+938846 | MS.gene64023:CDS |
| GGTTCTTAACTACTCTCTCC+CGG | 0.565871 | 1.3:-940307 | None:intergenic |
| TAAAATACACCTCAAAGAAG+AGG | 0.565903 | 1.3:+937721 | MS.gene64023:CDS |
| TGTCAATTTACCCTCAGACT+TGG | 0.566708 | 1.3:-939676 | None:intergenic |
| TCCTTGATGATAGGGTGTCT+AGG | 0.566886 | 1.3:-940281 | None:intergenic |
| CGGGAAGGATTCTAAAGACA+AGG | 0.569516 | 1.3:+940031 | MS.gene64023:CDS |
| TATTTACAGCACCAAGTCTG+AGG | 0.569728 | 1.3:+939665 | MS.gene64023:intron |
| TCCTAGACACCCTATCATCA+AGG | 0.573259 | 1.3:+940280 | MS.gene64023:CDS |
| TCTAACATACAACTTCAGGT+TGG | 0.576509 | 1.3:-938952 | None:intergenic |
| ACTTCTCCGCATTACTGCGA+AGG | 0.578324 | 1.3:-936238 | None:intergenic |
| ATCTCTGTTCCACGTCCTAG+TGG | 0.579957 | 1.3:-937698 | None:intergenic |
| TGCTTCAAACGAAGCTGATG+AGG | 0.581857 | 1.3:+940632 | MS.gene64023:CDS |
| AGTAGTAGATCCACCAAAGG+TGG | 0.582933 | 1.3:+936036 | MS.gene64023:CDS |
| GGAACTCTTAAATGATGTGA+AGG | 0.585981 | 1.3:+938618 | MS.gene64023:CDS |
| TCCTGATGCAACAGTTGAGG+AGG | 0.586304 | 1.3:+940560 | MS.gene64023:CDS |
| CAGTCCTGATGCAACAGTTG+AGG | 0.589745 | 1.3:+940557 | MS.gene64023:CDS |
| TCTGACTTTCAGGTATGTAT+GGG | 0.590095 | 1.3:+937625 | MS.gene64023:intron |
| TCAAGGATCTAACTAAGTGG+TGG | 0.593513 | 1.3:+940069 | MS.gene64023:CDS |
| CTTCTCCGCATTACTGCGAA+GGG | 0.594891 | 1.3:-936237 | None:intergenic |
| ATTCTACCACTCTCTTGCCA+AGG | 0.602333 | 1.3:+938690 | MS.gene64023:CDS |
| TTCCAAAATGTGTCCAAGGA+GGG | 0.604051 | 1.3:+939999 | MS.gene64023:CDS |
| CAGAGGTATTGGTATGACAA+AGG | 0.604095 | 1.3:+937246 | MS.gene64023:CDS |
| AAATTTCAAGCGAATGCGGA+AGG | 0.606036 | 1.3:+936001 | MS.gene64023:CDS |
| AGACTCGTCGTCTTCATCAG+CGG | 0.606434 | 1.3:-938346 | None:intergenic |
| TTTGATGTCACCACTACACA+AGG | 0.606525 | 1.3:-940155 | None:intergenic |
| GGGAAGCAAAGAGGTTGATG+TGG | 0.608554 | 1.3:+938317 | MS.gene64023:CDS |
| TGAAGACGACGAGTCTTCTG+AGG | 0.608975 | 1.3:+938353 | MS.gene64023:CDS |
| AAGCAAAGAGGTTGATGTGG+AGG | 0.610301 | 1.3:+938320 | MS.gene64023:CDS |
| ATACTTGATGCAATACCTGA+TGG | 0.612459 | 1.3:+939959 | MS.gene64023:CDS |
| GCCTAAAACAAAGACAGTGA+AGG | 0.613840 | 1.3:+938579 | MS.gene64023:CDS |
| CCTTCAAGGATCTAACTAAG+TGG | 0.614149 | 1.3:+940066 | MS.gene64023:CDS |
| ATTTACAGCACCAAGTCTGA+GGG | 0.614924 | 1.3:+939666 | MS.gene64023:intron |
| GAATCCAAAGGAGGTTACAG+AGG | 0.616769 | 1.3:+938654 | MS.gene64023:CDS |
| GAGATCCCTTCGCAGTAATG+CGG | 0.618086 | 1.3:+936232 | MS.gene64023:CDS |
| AACTTCCCTATCTATATCTG+GGG | 0.620396 | 1.3:+938297 | MS.gene64023:CDS |
| ATCCTATCTATTAGAGACAG+AGG | 0.620781 | 1.3:+937229 | MS.gene64023:CDS |
| CCGATTCAGATGTTGTCAAG+AGG | 0.623522 | 1.3:+936095 | MS.gene64023:CDS |
| AAGCTTACGGATCATATCAA+GGG | 0.627367 | 1.3:-939230 | None:intergenic |
| TGGAATGAACCACTAGGACG+TGG | 0.627795 | 1.3:+937689 | MS.gene64023:CDS |
| TCTCTTCTCATCAACATCAG+AGG | 0.630151 | 1.3:-939448 | None:intergenic |
| CTATATCTGGGGAAGCAAAG+AGG | 0.633804 | 1.3:+938308 | MS.gene64023:CDS |
| ATGTGAAGGCTATATGGCTG+AGG | 0.634531 | 1.3:+938632 | MS.gene64023:CDS |
| GTTGAGAAAATGCAGACAAG+TGG | 0.638859 | 1.3:+937412 | MS.gene64023:CDS |
| AAGTCCTGAGGTGCTTTAGG+TGG | 0.640658 | 1.3:-938900 | None:intergenic |
| TCAATCAGCTGAAAGCCCCA+AGG | 0.640725 | 1.3:+938507 | MS.gene64023:intron |
| TCTGATGTTGATGAGAAGAG+AGG | 0.646244 | 1.3:+939450 | MS.gene64023:CDS |
| ATATTACCTTGGCAAGAGAG+TGG | 0.647445 | 1.3:-938696 | None:intergenic |
| GCATCAAGTATTCATCAACT+GGG | 0.657313 | 1.3:-939947 | None:intergenic |
| TGAAGGAAACGACTTACGAG+TGG | 0.661856 | 1.3:+938596 | MS.gene64023:CDS |
| AAATGACGATGGTGATGTCA+AGG | 0.662375 | 1.3:+940656 | MS.gene64023:CDS |
| GTTCCAAAATGTGTCCAAGG+AGG | 0.663752 | 1.3:+939998 | MS.gene64023:CDS |
| GAAGGAAACGACTTACGAGT+GGG | 0.669364 | 1.3:+938597 | MS.gene64023:CDS |
| AGGTATTGGTATGACAAAGG+AGG | 0.676241 | 1.3:+937249 | MS.gene64023:CDS |
| GGATAACACTCCTTGTGTAG+TGG | 0.678484 | 1.3:+940145 | MS.gene64023:CDS |
| GCAAAGTGTCAGAATCAACA+AGG | 0.678755 | 1.3:-939132 | None:intergenic |
| GGAGGGTCTGAAACTCGGGA+AGG | 0.685274 | 1.3:+940016 | MS.gene64023:CDS |
| GATACATGGAATGAACCACT+AGG | 0.687380 | 1.3:+937683 | MS.gene64023:CDS |
| TAACTCTCGTACAAGTCCTG+AGG | 0.691370 | 1.3:-938912 | None:intergenic |
| TGAAGTAGTAGATCCACCAA+AGG | 0.692806 | 1.3:+936033 | MS.gene64023:CDS |
| ATCAGCTGAAAGCCCCAAGG+AGG | 0.696234 | 1.3:+938510 | MS.gene64023:intron |
| ATGGCTGAGGAATCCAAAGG+AGG | 0.701467 | 1.3:+938645 | MS.gene64023:CDS |
| GAATCGGTTGAAAGTCCATG+AGG | 0.719230 | 1.3:-936079 | None:intergenic |
| TATATGGCTGAGGAATCCAA+AGG | 0.735087 | 1.3:+938642 | MS.gene64023:CDS |
| GCTGATGAGGTAAATGACGA+TGG | 0.743848 | 1.3:+940645 | MS.gene64023:CDS |
| CATTTGAAATCAGTTCCCTG+AGG | 0.745225 | 1.3:-936334 | None:intergenic |
| GAGAGTAGTTAAGAACCCTG+AGG | 0.757743 | 1.3:+940313 | MS.gene64023:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTGTTTATCTAAAAA+AGG | + | chr1.3:937155-937174 | MS.gene64023:intron | 10.0% |
| !! | ATACAAGTATGTATAATTTA+AGG | + | chr1.3:938382-938401 | MS.gene64023:intron | 15.0% |
| !! | CAATAAAAAAGAAACTTATT+AGG | + | chr1.3:939203-939222 | MS.gene64023:CDS | 15.0% |
| !! | TATAATAAAAGTGATAGTTT+GGG | - | chr1.3:937785-937804 | None:intergenic | 15.0% |
| !! | TTATAATAAAAGTGATAGTT+TGG | - | chr1.3:937786-937805 | None:intergenic | 15.0% |
| !! | TTATCTATTCAATATACAAT+TGG | + | chr1.3:938203-938222 | MS.gene64023:intron | 15.0% |
| !!! | TAAATGAAAATTTGTTTGTT+AGG | + | chr1.3:935974-935993 | MS.gene64023:intron | 15.0% |
| !! | ACAAATAAGTTCTATATTGT+AGG | + | chr1.3:936748-936767 | MS.gene64023:intron | 20.0% |
| !! | ATAATAAAAGTGATAGTTTG+GGG | - | chr1.3:937784-937803 | None:intergenic | 20.0% |
| !! | ATAATTAAAGTATACAAACC+TGG | - | chr1.3:936850-936869 | None:intergenic | 20.0% |
| !! | ATCGTATACAATAATAAGTA+GGG | + | chr1.3:938003-938022 | MS.gene64023:intron | 20.0% |
| !! | ATGTACAAATTATAAATGCA+AGG | - | chr1.3:936707-936726 | None:intergenic | 20.0% |
| !! | ATGTTGAAGACATAAAATAA+GGG | - | chr1.3:940369-940388 | None:intergenic | 20.0% |
| !! | GGTTAAATTAAATTATCACA+GGG | + | chr1.3:938074-938093 | MS.gene64023:intron | 20.0% |
| !! | GTCAAAATAAATACAATTTC+TGG | - | chr1.3:939871-939890 | None:intergenic | 20.0% |
| !! | TATCGTATACAATAATAAGT+AGG | + | chr1.3:938002-938021 | MS.gene64023:intron | 20.0% |
| !! | TATGTTGAAGACATAAAATA+AGG | - | chr1.3:940370-940389 | None:intergenic | 20.0% |
| !! | TGAATAGGTAAAATTGATTA+TGG | + | chr1.3:936460-936479 | MS.gene64023:intron | 20.0% |
| !! | TTTGGAAAATCTATTAAACT+TGG | + | chr1.3:939498-939517 | MS.gene64023:CDS | 20.0% |
| !!! | CTTAACTTGTAAAACTATTT+GGG | + | chr1.3:937014-937033 | MS.gene64023:intron | 20.0% |
| !!! | TGTTTTAATGCTGTTTTAAT+GGG | + | chr1.3:936953-936972 | MS.gene64023:intron | 20.0% |
| !!! | TGTTTTAATGGGTTTATTTT+TGG | + | chr1.3:936964-936983 | MS.gene64023:intron | 20.0% |
| !!! | TTCTTAACAAATGTTCTTTT+TGG | + | chr1.3:939095-939114 | MS.gene64023:intron | 20.0% |
| !!! | TTGATGATACTTATAATGTT+GGG | + | chr1.3:938780-938799 | MS.gene64023:intron | 20.0% |
| !!! | TTTTTTTCAATATATGCTAC+AGG | + | chr1.3:939908-939927 | MS.gene64023:intron | 20.0% |
| ! | ACATTGTTAACTGATGAAAT+GGG | - | chr1.3:939628-939647 | None:intergenic | 25.0% |
| ! | AGATCATTTCCAAAATCAAT+AGG | - | chr1.3:937608-937627 | None:intergenic | 25.0% |
| ! | ATATCTTTATATGTTCCGTT+GGG | - | chr1.3:938744-938763 | None:intergenic | 25.0% |
| ! | ATTAAAACACCATCATTCTT+TGG | - | chr1.3:936942-936961 | None:intergenic | 25.0% |
| ! | CAAAATGTCTTTATCAGTAA+GGG | - | chr1.3:936798-936817 | None:intergenic | 25.0% |
| ! | CAATTCACTTTACAGTAATA+AGG | + | chr1.3:936304-936323 | MS.gene64023:CDS | 25.0% |
| ! | CCTATAAGAGTTAAATAACA+AGG | - | chr1.3:939594-939613 | None:intergenic | 25.0% |
| ! | GCTTATATGAACTTATCTAT+TGG | + | chr1.3:936991-937010 | MS.gene64023:intron | 25.0% |
| ! | GGGTTAAATTAAATTATCAC+AGG | + | chr1.3:938073-938092 | MS.gene64023:intron | 25.0% |
| ! | GTATAATTTAAGGATTCAGT+TGG | + | chr1.3:938392-938411 | MS.gene64023:intron | 25.0% |
| ! | TACATTGTTAACTGATGAAA+TGG | - | chr1.3:939629-939648 | None:intergenic | 25.0% |
| ! | TATTAAACTTGGTATCATTG+AGG | + | chr1.3:939509-939528 | MS.gene64023:CDS | 25.0% |
| ! | TCGTATACAATAATAAGTAG+GGG | + | chr1.3:938004-938023 | MS.gene64023:intron | 25.0% |
| ! | TCTGCATCAAAAGTTAAAAT+TGG | - | chr1.3:939420-939439 | None:intergenic | 25.0% |
| ! | TGAGAAACCATAAAAGAATT+AGG | - | chr1.3:939337-939356 | None:intergenic | 25.0% |
| ! | TGATGATACTTATAATGTTG+GGG | + | chr1.3:938781-938800 | MS.gene64023:intron | 25.0% |
| ! | TTTATGTCTTCAACATAGTT+GGG | + | chr1.3:940373-940392 | MS.gene64023:intron | 25.0% |
| !! | AATTGATTTACATGTATGGT+TGG | - | chr1.3:936622-936641 | None:intergenic | 25.0% |
| !! | CAAGAATCCTAATTCTTTTA+TGG | + | chr1.3:939327-939346 | MS.gene64023:intron | 25.0% |
| !! | CTTACTGATAAAGACATTTT+GGG | + | chr1.3:936797-936816 | MS.gene64023:CDS | 25.0% |
| !! | CTTGATGATACTTATAATGT+TGG | + | chr1.3:938779-938798 | MS.gene64023:intron | 25.0% |
| !! | GGATTTTCAAAGTATATGTT+TGG | - | chr1.3:936686-936705 | None:intergenic | 25.0% |
| !! | GTAGAATTGATTTACATGTA+TGG | - | chr1.3:936626-936645 | None:intergenic | 25.0% |
| !! | TAATAAGGATATTTTCCTCA+GGG | + | chr1.3:936319-936338 | MS.gene64023:CDS | 25.0% |
| !! | TCAGGTATGTATATAGTTTT+GGG | + | chr1.3:937313-937332 | MS.gene64023:intron | 25.0% |
| !! | TTCAGGTATGTATATAGTTT+TGG | + | chr1.3:937312-937331 | MS.gene64023:intron | 25.0% |
| !! | TTTTATGTCTTCAACATAGT+TGG | + | chr1.3:940372-940391 | MS.gene64023:intron | 25.0% |
| !! | TTTTGATAAACGATTTCTGT+TGG | - | chr1.3:939541-939560 | None:intergenic | 25.0% |
| !!! | CAAGTTAGAATTGATTTTGA+CGG | + | chr1.3:936571-936590 | MS.gene64023:intron | 25.0% |
| !!! | CCTTGTTATTTAACTCTTAT+AGG | + | chr1.3:939591-939610 | MS.gene64023:intron | 25.0% |
| !!! | CTGTAGGTTTTTTAATGATA+AGG | + | chr1.3:936915-936934 | MS.gene64023:intron | 25.0% |
| !!! | GCTTAACTTGTAAAACTATT+TGG | + | chr1.3:937013-937032 | MS.gene64023:intron | 25.0% |
| !!! | GTGTTTTAATGCTGTTTTAA+TGG | + | chr1.3:936952-936971 | MS.gene64023:intron | 25.0% |
| !!! | TAATAACTTCTGTTTTTCAC+AGG | + | chr1.3:938245-938264 | MS.gene64023:intron | 25.0% |
| !!! | TACGCTTTTAGAATCAATTT+TGG | + | chr1.3:936643-936662 | MS.gene64023:intron | 25.0% |
| !!! | TGATTTTAAAATCAAGCAAC+TGG | - | chr1.3:937809-937828 | None:intergenic | 25.0% |
| !!! | TTCTTTATTTTTCACTGCAT+GGG | + | chr1.3:937861-937880 | MS.gene64023:intron | 25.0% |
| AAACTTCAGGAAACATAGTT+AGG | - | chr1.3:938126-938145 | None:intergenic | 30.0% | |
| AAGCTAACATGGAAAACTTA+TGG | - | chr1.3:937079-937098 | None:intergenic | 30.0% | |
| ACAAGCTGAAAACATATAAG+CGG | - | chr1.3:937054-937073 | None:intergenic | 30.0% | |
| ACTATTTATGTGATACCCAA+CGG | + | chr1.3:938726-938745 | MS.gene64023:intron | 30.0% | |
| ACTCAAAAAGCTCAAATACT+TGG | - | chr1.3:939015-939034 | None:intergenic | 30.0% | |
| ATAAAGATATCCACTTCTCT+TGG | + | chr1.3:938754-938773 | MS.gene64023:intron | 30.0% | |
| ATGTCAACAATTTAACTCTC+TGG | + | chr1.3:937904-937923 | MS.gene64023:intron | 30.0% | |
| ATTGAAATGTGTGTGAATGA+AGG | + | chr1.3:936189-936208 | MS.gene64023:intron | 30.0% | |
| ATTTCTCGTGATACATTCAA+TGG | - | chr1.3:939157-939176 | None:intergenic | 30.0% | |
| CATTGTTAACTGATGAAATG+GGG | - | chr1.3:939627-939646 | None:intergenic | 30.0% | |
| CCAAAATGTCTTTATCAGTA+AGG | - | chr1.3:936799-936818 | None:intergenic | 30.0% | |
| CGTATACAATAATAAGTAGG+GGG | + | chr1.3:938005-938024 | MS.gene64023:intron | 30.0% | |
| CTCAAAAAGCTCAAATACTT+GGG | - | chr1.3:939014-939033 | None:intergenic | 30.0% | |
| CTTAGAAGGTAAACTCTTAT+GGG | + | chr1.3:938053-938072 | MS.gene64023:intron | 30.0% | |
| GAAGTTAGAATGTAAAGCTT+TGG | - | chr1.3:936552-936571 | None:intergenic | 30.0% | |
| GAGTTAAATTGTTGACATCT+AGG | - | chr1.3:937902-937921 | None:intergenic | 30.0% | |
| GATATCTTTATATGTTCCGT+TGG | - | chr1.3:938745-938764 | None:intergenic | 30.0% | |
| GATGCAGATTAAGTTAGATA+AGG | + | chr1.3:937198-937217 | MS.gene64023:intron | 30.0% | |
| GCTGATTGAAGAGTAAAATA+TGG | - | chr1.3:938496-938515 | None:intergenic | 30.0% | |
| GTTTCCTGAAGTTTAAAAGA+TGG | + | chr1.3:938132-938151 | MS.gene64023:intron | 30.0% | |
| TAAAATACACCTCAAAGAAG+AGG | + | chr1.3:937721-937740 | MS.gene64023:CDS | 30.0% | |
| TAAATGATGTGAAGGCTATA+TGG | + | chr1.3:938626-938645 | MS.gene64023:CDS | 30.0% | |
| TAACTTCCCTATCTATATCT+GGG | + | chr1.3:938296-938315 | MS.gene64023:CDS | 30.0% | |
| TCAAAAATTTCAAGCGAATG+CGG | + | chr1.3:935997-936016 | MS.gene64023:CDS | 30.0% | |
| TCTGAAGAAGAAAAACTTTG+AGG | + | chr1.3:939803-939822 | MS.gene64023:CDS | 30.0% | |
| TCTTATCTTCATAATCCATC+AGG | - | chr1.3:939977-939996 | None:intergenic | 30.0% | |
| TGACAAAGAAAAGAAAGGTA+TGG | + | chr1.3:939279-939298 | MS.gene64023:intron | 30.0% | |
| TTAAATTATCACAGGGTGAT+TGG | + | chr1.3:938081-938100 | MS.gene64023:intron | 30.0% | |
| TTAACTTCCCTATCTATATC+TGG | + | chr1.3:938295-938314 | MS.gene64023:CDS | 30.0% | |
| TTACGCACATTTCATTTCAA+TGG | + | chr1.3:935937-935956 | MS.gene64023:intron | 30.0% | |
| TTGAAATGTGTGTGAATGAA+GGG | + | chr1.3:936190-936209 | MS.gene64023:intron | 30.0% | |
| TTGCAATTTCAGAAGATACA+TGG | + | chr1.3:937669-937688 | MS.gene64023:CDS | 30.0% | |
| ! | AATTCTAGAAGCAAAATCCT+TGG | - | chr1.3:940508-940527 | None:intergenic | 30.0% |
| ! | AATTGGTCTATTGCTAAATC+TGG | + | chr1.3:938220-938239 | MS.gene64023:intron | 30.0% |
| ! | ATTCTAGAAGCAAAATCCTT+GGG | - | chr1.3:940507-940526 | None:intergenic | 30.0% |
| ! | CCTTACTGATAAAGACATTT+TGG | + | chr1.3:936796-936815 | MS.gene64023:CDS | 30.0% |
| ! | GAGGATTTGGTAAAGAATTT+GGG | + | chr1.3:937268-937287 | MS.gene64023:CDS | 30.0% |
| ! | GTAATAAGGATATTTTCCTC+AGG | + | chr1.3:936318-936337 | MS.gene64023:CDS | 30.0% |
| ! | GTTTTCACATAAGCTATAAG+TGG | - | chr1.3:937109-937128 | None:intergenic | 30.0% |
| ! | TACATATCTAGAATGAAAGC+TGG | + | chr1.3:939711-939730 | MS.gene64023:CDS | 30.0% |
| ! | TTAACAATGTAGCTGATTCT+TGG | + | chr1.3:939638-939657 | MS.gene64023:intron | 30.0% |
| ! | TTCTAAAGACAAGGAACTAA+AGG | + | chr1.3:940040-940059 | MS.gene64023:CDS | 30.0% |
| !! | ACAAATGTTCTTTTTGGCAT+TGG | + | chr1.3:939101-939120 | MS.gene64023:intron | 30.0% |
| !! | CAAATGTTCTTTTTGGCATT+GGG | + | chr1.3:939102-939121 | MS.gene64023:intron | 30.0% |
| !! | CTTGAAATTGCTTTTCTGAT+TGG | + | chr1.3:937548-937567 | MS.gene64023:intron | 30.0% |
| !! | GTTAATTAGTTTGTCTCTGT+AGG | + | chr1.3:936899-936918 | MS.gene64023:intron | 30.0% |
| !! | TTGGTGTGAAGGATTTTAAT+TGG | + | chr1.3:937366-937385 | MS.gene64023:intron | 30.0% |
| !!! | GTACGTTTTGAGTTTTGAAT+CGG | + | chr1.3:936408-936427 | MS.gene64023:intron | 30.0% |
| !!! | GTTCTTTATTTTTCACTGCA+TGG | + | chr1.3:937860-937879 | MS.gene64023:intron | 30.0% |
| !!! | TAATGGGTTTATTTTTGGAC+TGG | + | chr1.3:936969-936988 | MS.gene64023:intron | 30.0% |
| AACTTCCCTATCTATATCTG+GGG | + | chr1.3:938297-938316 | MS.gene64023:CDS | 35.0% | |
| AAGCTTACGGATCATATCAA+GGG | - | chr1.3:939233-939252 | None:intergenic | 35.0% | |
| AAGTTCTATATTGTAGGCAC+TGG | + | chr1.3:936754-936773 | MS.gene64023:intron | 35.0% | |
| AGTGGTGATCTCAATCTAAT+TGG | + | chr1.3:937430-937449 | MS.gene64023:CDS | 35.0% | |
| AGTTTCAAGCTGAAGTTTCA+AGG | + | chr1.3:936264-936283 | MS.gene64023:CDS | 35.0% | |
| ATACTTGATGCAATACCTGA+TGG | + | chr1.3:939959-939978 | MS.gene64023:CDS | 35.0% | |
| ATCCTATCTATTAGAGACAG+AGG | + | chr1.3:937229-937248 | MS.gene64023:CDS | 35.0% | |
| CATTTCCAAAATCAATAGGC+TGG | - | chr1.3:937604-937623 | None:intergenic | 35.0% | |
| CCATAAGAGTTTACCTTCTA+AGG | - | chr1.3:938055-938074 | None:intergenic | 35.0% | |
| CCTTAGAAGGTAAACTCTTA+TGG | + | chr1.3:938052-938071 | MS.gene64023:intron | 35.0% | |
| CTCAATCTAATTGGGCAATT+TGG | + | chr1.3:937439-937458 | MS.gene64023:CDS | 35.0% | |
| GCATCAAGTATTCATCAACT+GGG | - | chr1.3:939950-939969 | None:intergenic | 35.0% | |
| GGAACTCTTAAATGATGTGA+AGG | + | chr1.3:938618-938637 | MS.gene64023:CDS | 35.0% | |
| GGGTATCACATAAATAGTGA+TGG | - | chr1.3:938724-938743 | None:intergenic | 35.0% | |
| GTAGTGGTGACATCAAAATT+TGG | + | chr1.3:940161-940180 | MS.gene64023:CDS | 35.0% | |
| GTGGTGATCTCAATCTAATT+GGG | + | chr1.3:937431-937450 | MS.gene64023:CDS | 35.0% | |
| TACCTCTGTCTCTAATAGAT+AGG | - | chr1.3:937234-937253 | None:intergenic | 35.0% | |
| TAGTGATGGCAATATTACCT+TGG | - | chr1.3:938710-938729 | None:intergenic | 35.0% | |
| TCCACTGACAAAGAAAAGAA+AGG | + | chr1.3:939274-939293 | MS.gene64023:CDS | 35.0% | |
| TCTAACATACAACTTCAGGT+TGG | - | chr1.3:938955-938974 | None:intergenic | 35.0% | |
| TGATAAACGATTTCTGTTGG+TGG | - | chr1.3:939538-939557 | None:intergenic | 35.0% | |
| TGATAAGGACCAAAGAATGA+TGG | + | chr1.3:936930-936949 | MS.gene64023:intron | 35.0% | |
| TGCATCAAGTATTCATCAAC+TGG | - | chr1.3:939951-939970 | None:intergenic | 35.0% | |
| TGCGGTGACAAAAATTGAAT+AGG | + | chr1.3:936445-936464 | MS.gene64023:intron | 35.0% | |
| TGGTGACATCAAAATTTGGT+TGG | + | chr1.3:940165-940184 | MS.gene64023:CDS | 35.0% | |
| TGTCTTTATCAGTAAGGGAT+AGG | - | chr1.3:936793-936812 | None:intergenic | 35.0% | |
| TTGGAAATGATCTGACTTTC+AGG | + | chr1.3:937615-937634 | MS.gene64023:intron | 35.0% | |
| TTTCTTGTTGAATGATCCCA+AGG | + | chr1.3:940488-940507 | MS.gene64023:CDS | 35.0% | |
| ! | ACCTTTCTTTTCTTTGTCAG+TGG | - | chr1.3:939278-939297 | None:intergenic | 35.0% |
| ! | ATAGCAAAATCTGGAACTTC+AGG | + | chr1.3:937295-937314 | MS.gene64023:CDS | 35.0% |
| ! | ATCGACATTGTCATTTGCAA+GGG | - | chr1.3:940102-940121 | None:intergenic | 35.0% |
| ! | ATCTGACTTTCAGGTATGTA+TGG | + | chr1.3:937624-937643 | MS.gene64023:intron | 35.0% |
| ! | ATTTTCCAGTTGTTCTTTGC+TGG | - | chr1.3:939766-939785 | None:intergenic | 35.0% |
| ! | CAAATTTAGAACGTACCTCA+GGG | - | chr1.3:940331-940350 | None:intergenic | 35.0% |
| ! | CTTTTCTGATTGGTATGTTG+TGG | + | chr1.3:937558-937577 | MS.gene64023:intron | 35.0% |
| ! | GGAGGATTTGGTAAAGAATT+TGG | + | chr1.3:937267-937286 | MS.gene64023:CDS | 35.0% |
| ! | GTGGTTTTCATAAGCTAACA+TGG | - | chr1.3:937090-937109 | None:intergenic | 35.0% |
| ! | TCAAATTTAGAACGTACCTC+AGG | - | chr1.3:940332-940351 | None:intergenic | 35.0% |
| ! | TCTATTAGAGACAGAGGTAT+TGG | + | chr1.3:937235-937254 | MS.gene64023:CDS | 35.0% |
| ! | TCTGACTTTCAGGTATGTAT+GGG | + | chr1.3:937625-937644 | MS.gene64023:intron | 35.0% |
| ! | TCTGCCATCTTTTAAACTTC+AGG | - | chr1.3:938139-938158 | None:intergenic | 35.0% |
| ! | TGAAGTTCCAGATTTTGCTA+TGG | - | chr1.3:937296-937315 | None:intergenic | 35.0% |
| ! | TGGTATGTTGTGGATGTTTT+TGG | + | chr1.3:937568-937587 | MS.gene64023:intron | 35.0% |
| ! | TTCAACATAGTTGGGCTTTT+TGG | + | chr1.3:940381-940400 | MS.gene64023:intron | 35.0% |
| !! | ACTCAATTGGCTTACTTTTC+AGG | + | chr1.3:940407-940426 | MS.gene64023:intron | 35.0% |
| !! | CTTCTGTTTTTCACAGGAAT+TGG | + | chr1.3:938251-938270 | MS.gene64023:intron | 35.0% |
| !! | GATAAAGACATTTTGGGTGA+AGG | + | chr1.3:936803-936822 | MS.gene64023:CDS | 35.0% |
| !!! | GGCTTTTTGGTTTACTCAAT+TGG | + | chr1.3:940394-940413 | MS.gene64023:intron | 35.0% |
| !!! | TCCTTCACTGTCTTTGTTTT+AGG | - | chr1.3:938583-938602 | None:intergenic | 35.0% |
| !!! | TTATGCCAGCCTATTGATTT+TGG | + | chr1.3:937596-937615 | MS.gene64023:intron | 35.0% |
| AAAAAGCAAGCATACATGCG+CGG | + | chr1.3:940236-940255 | MS.gene64023:CDS | 40.0% | |
| AAAGTCAGTGAAGGGAATTC+AGG | - | chr1.3:939388-939407 | None:intergenic | 40.0% | |
| AAATTTCAAGCGAATGCGGA+AGG | + | chr1.3:936001-936020 | MS.gene64023:CDS | 40.0% | |
| AAGAGAGAGAAGAAGAAGAG+TGG | - | chr1.3:935764-935783 | None:intergenic | 40.0% | |
| ACAAACCTGGATTTCAAGCT+TGG | - | chr1.3:936837-936856 | None:intergenic | 40.0% | |
| AGAAGCGAAAAGTCAGTGAA+GGG | - | chr1.3:939396-939415 | None:intergenic | 40.0% | |
| AGCTGAAGTTTCAAGGCTTA+TGG | + | chr1.3:936271-936290 | MS.gene64023:CDS | 40.0% | |
| AGGTATGGTGTAATGACTGT+TGG | + | chr1.3:939294-939313 | MS.gene64023:intron | 40.0% | |
| ATATTACCTTGGCAAGAGAG+TGG | - | chr1.3:938699-938718 | None:intergenic | 40.0% | |
| ATGTCAAGGATGAGTTGTAG+AGG | + | chr1.3:940670-940689 | MS.gene64023:CDS | 40.0% | |
| ATTTACAGCACCAAGTCTGA+GGG | + | chr1.3:939666-939685 | MS.gene64023:intron | 40.0% | |
| ATTTGGTTGGAGTGCAAACA+TGG | + | chr1.3:940178-940197 | MS.gene64023:CDS | 40.0% | |
| CAAGCTTACGGATCATATCA+AGG | - | chr1.3:939234-939253 | None:intergenic | 40.0% | |
| CCAAAGGTGGAAGAAAAACT+CGG | + | chr1.3:936049-936068 | MS.gene64023:CDS | 40.0% | |
| CCACTTAGTTAGATCCTTGA+AGG | - | chr1.3:940069-940088 | None:intergenic | 40.0% | |
| CCTCTTGACAACATCTGAAT+CGG | - | chr1.3:936098-936117 | None:intergenic | 40.0% | |
| CCTTCAAGGATCTAACTAAG+TGG | + | chr1.3:940066-940085 | MS.gene64023:CDS | 40.0% | |
| CGCACATTTCATTTCAATGG+TGG | + | chr1.3:935940-935959 | MS.gene64023:intron | 40.0% | |
| CGCTCGCTTACATTTGAAAA+GGG | - | chr1.3:939361-939380 | None:intergenic | 40.0% | |
| CTCGTCTAACATACAACTTC+AGG | - | chr1.3:938959-938978 | None:intergenic | 40.0% | |
| CTCTTAGCTGAAATGTTTGC+CGG | + | chr1.3:937336-937355 | MS.gene64023:intron | 40.0% | |
| GAAGTTCCAAAATGTGTCCA+AGG | + | chr1.3:939995-940014 | MS.gene64023:CDS | 40.0% | |
| GATACATGGAATGAACCACT+AGG | + | chr1.3:937683-937702 | MS.gene64023:CDS | 40.0% | |
| GCCTAAAACAAAGACAGTGA+AGG | + | chr1.3:938579-938598 | MS.gene64023:CDS | 40.0% | |
| GCGATGACAAACCTTTATCA+TGG | + | chr1.3:938826-938845 | MS.gene64023:CDS | 40.0% | |
| GGAACTAAAGGAATCCTTCA+AGG | + | chr1.3:940052-940071 | MS.gene64023:CDS | 40.0% | |
| GGTATGGTGTAATGACTGTT+GGG | + | chr1.3:939295-939314 | MS.gene64023:intron | 40.0% | |
| GTAAAGTGGCTCCATGATAA+AGG | - | chr1.3:938840-938859 | None:intergenic | 40.0% | |
| GTTGAGAAAATGCAGACAAG+TGG | + | chr1.3:937412-937431 | MS.gene64023:CDS | 40.0% | |
| TAGAAGCGAAAAGTCAGTGA+AGG | - | chr1.3:939397-939416 | None:intergenic | 40.0% | |
| TATATGGCTGAGGAATCCAA+AGG | + | chr1.3:938642-938661 | MS.gene64023:CDS | 40.0% | |
| TATTTACAGCACCAAGTCTG+AGG | + | chr1.3:939665-939684 | MS.gene64023:intron | 40.0% | |
| TCAAGGATCTAACTAAGTGG+TGG | + | chr1.3:940069-940088 | MS.gene64023:CDS | 40.0% | |
| TCATCTTCACTTTCCTCCTT+GGG | - | chr1.3:938526-938545 | None:intergenic | 40.0% | |
| TCCAAACTCATTCCAGAACT+TGG | - | chr1.3:939484-939503 | None:intergenic | 40.0% | |
| TCTCTTCTCATCAACATCAG+AGG | - | chr1.3:939451-939470 | None:intergenic | 40.0% | |
| TGAAGTAGTAGATCCACCAA+AGG | + | chr1.3:936033-936052 | MS.gene64023:CDS | 40.0% | |
| TGCTTCCCCAGATATAGATA+GGG | - | chr1.3:938305-938324 | None:intergenic | 40.0% | |
| TGGAGTATGCATACCTTAGA+AGG | + | chr1.3:938039-938058 | MS.gene64023:intron | 40.0% | |
| TGGTATGACAAAGGAGGATT+TGG | + | chr1.3:937255-937274 | MS.gene64023:CDS | 40.0% | |
| TGTCAATTTACCCTCAGACT+TGG | - | chr1.3:939679-939698 | None:intergenic | 40.0% | |
| TGTGAAGATATCCAACCGAT+TGG | + | chr1.3:940124-940143 | MS.gene64023:CDS | 40.0% | |
| TGTGTGTGAATGAAGGGAAT+CGG | + | chr1.3:936196-936215 | MS.gene64023:intron | 40.0% | |
| TTCATCTTCACTTTCCTCCT+TGG | - | chr1.3:938527-938546 | None:intergenic | 40.0% | |
| TTCCAAAATGTGTCCAAGGA+GGG | + | chr1.3:939999-940018 | MS.gene64023:CDS | 40.0% | |
| TTGCTTCCCCAGATATAGAT+AGG | - | chr1.3:938306-938325 | None:intergenic | 40.0% | |
| TTGGGTACCATAGCAAAATC+TGG | + | chr1.3:937286-937305 | MS.gene64023:CDS | 40.0% | |
| TTTGATGTCACCACTACACA+AGG | - | chr1.3:940158-940177 | None:intergenic | 40.0% | |
| ! | AAATGACGATGGTGATGTCA+AGG | + | chr1.3:940656-940675 | MS.gene64023:CDS | 40.0% |
| ! | AATGTTTGCCGGTTGTGATT+TGG | + | chr1.3:937347-937366 | MS.gene64023:intron | 40.0% |
| ! | AGTTTTTCTTCCACCTTTGG+TGG | - | chr1.3:936049-936068 | None:intergenic | 40.0% |
| ! | CATCGACATTGTCATTTGCA+AGG | - | chr1.3:940103-940122 | None:intergenic | 40.0% |
| ! | CATTTGAAATCAGTTCCCTG+AGG | - | chr1.3:936337-936356 | None:intergenic | 40.0% |
| ! | CCTTTTCAAATGTAAGCGAG+CGG | + | chr1.3:939359-939378 | MS.gene64023:intron | 40.0% |
| ! | CTAATTGGGCAATTTGGAGT+TGG | + | chr1.3:937445-937464 | MS.gene64023:CDS | 40.0% |
| ! | GCAAAGTGTCAGAATCAACA+AGG | - | chr1.3:939135-939154 | None:intergenic | 40.0% |
| ! | GTATGGGAATCTAAAGCTGA+TGG | + | chr1.3:937641-937660 | MS.gene64023:CDS | 40.0% |
| ! | TCTGATGTTGATGAGAAGAG+AGG | + | chr1.3:939450-939469 | MS.gene64023:CDS | 40.0% |
| ! | TGGTGGATCTACTACTTCAT+CGG | - | chr1.3:936032-936051 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCAGACGCTCA+AGG | - | chr1.3:939797-939816 | None:intergenic | 40.0% |
| !! | ACCAAGTTCTGGAATGAGTT+TGG | + | chr1.3:939480-939499 | MS.gene64023:CDS | 40.0% |
| !! | AGGTATTGGTATGACAAAGG+AGG | + | chr1.3:937249-937268 | MS.gene64023:CDS | 40.0% |
| !! | CACAAGGAGTGTTATCCAAT+CGG | - | chr1.3:940142-940161 | None:intergenic | 40.0% |
| !! | CAGAGGTATTGGTATGACAA+AGG | + | chr1.3:937246-937265 | MS.gene64023:CDS | 40.0% |
| !! | TCTTTTTGGCATTGGGAACA+GGG | + | chr1.3:939109-939128 | MS.gene64023:intron | 40.0% |
| !! | TTCTTTTTGGCATTGGGAAC+AGG | + | chr1.3:939108-939127 | MS.gene64023:intron | 40.0% |
| ACCCTATCATCAAGGAACTC+CGG | + | chr1.3:940288-940307 | MS.gene64023:CDS | 45.0% | |
| AGTAGTAGATCCACCAAAGG+TGG | + | chr1.3:936036-936055 | MS.gene64023:CDS | 45.0% | |
| ATGTGAAGGCTATATGGCTG+AGG | + | chr1.3:938632-938651 | MS.gene64023:CDS | 45.0% | |
| ATTCTACCACTCTCTTGCCA+AGG | + | chr1.3:938690-938709 | MS.gene64023:CDS | 45.0% | |
| CATCACCTTCAGCAGTAAAG+TGG | - | chr1.3:938854-938873 | None:intergenic | 45.0% | |
| CATCTTCACTTTCCTCCTTG+GGG | - | chr1.3:938525-938544 | None:intergenic | 45.0% | |
| CCGATTCAGATGTTGTCAAG+AGG | + | chr1.3:936095-936114 | MS.gene64023:CDS | 45.0% | |
| CCGCTCGCTTACATTTGAAA+AGG | - | chr1.3:939362-939381 | None:intergenic | 45.0% | |
| CCTTCACACCAAATCACAAC+CGG | - | chr1.3:937358-937377 | None:intergenic | 45.0% | |
| CTATATCTGGGGAAGCAAAG+AGG | + | chr1.3:938308-938327 | MS.gene64023:CDS | 45.0% | |
| CTTCTTCTTCTCGCAGATCA+AGG | + | chr1.3:935784-935803 | MS.gene64023:CDS | 45.0% | |
| GAAGGAAACGACTTACGAGT+GGG | + | chr1.3:938597-938616 | MS.gene64023:CDS | 45.0% | |
| GAATCCAAAGGAGGTTACAG+AGG | + | chr1.3:938654-938673 | MS.gene64023:CDS | 45.0% | |
| GAATCGGTTGAAAGTCCATG+AGG | - | chr1.3:936082-936101 | None:intergenic | 45.0% | |
| GAGAGAAGAAGAAGAGTGGA+AGG | - | chr1.3:935760-935779 | None:intergenic | 45.0% | |
| GAGAGTAGTTAAGAACCCTG+AGG | + | chr1.3:940313-940332 | MS.gene64023:CDS | 45.0% | |
| GAGGTCAATACACCAAGTTC+TGG | + | chr1.3:939469-939488 | MS.gene64023:CDS | 45.0% | |
| GCTGATGAGGTAAATGACGA+TGG | + | chr1.3:940645-940664 | MS.gene64023:CDS | 45.0% | |
| GGAAGATGAGACTGAAGTTG+AGG | + | chr1.3:940581-940600 | MS.gene64023:CDS | 45.0% | |
| GGATAACACTCCTTGTGTAG+TGG | + | chr1.3:940145-940164 | MS.gene64023:CDS | 45.0% | |
| GGTTCTTAACTACTCTCTCC+CGG | - | chr1.3:940310-940329 | None:intergenic | 45.0% | |
| GTTCCAAAATGTGTCCAAGG+AGG | + | chr1.3:939998-940017 | MS.gene64023:CDS | 45.0% | |
| TAACTCTCGTACAAGTCCTG+AGG | - | chr1.3:938915-938934 | None:intergenic | 45.0% | |
| TCATCAAGCTCCAAGAGAAG+TGG | - | chr1.3:938767-938786 | None:intergenic | 45.0% | |
| TCCTAGACACCCTATCATCA+AGG | + | chr1.3:940280-940299 | MS.gene64023:CDS | 45.0% | |
| TCTTCCTCTGTAACCTCCTT+TGG | - | chr1.3:938661-938680 | None:intergenic | 45.0% | |
| TGAAGGAAACGACTTACGAG+TGG | + | chr1.3:938596-938615 | MS.gene64023:CDS | 45.0% | |
| TGCTTCAAACGAAGCTGATG+AGG | + | chr1.3:940632-940651 | MS.gene64023:CDS | 45.0% | |
| TGGAACCAGCAAAGAACAAC+TGG | + | chr1.3:939758-939777 | MS.gene64023:CDS | 45.0% | |
| TTCTTCAGACGCTCAAGGAA+TGG | - | chr1.3:939792-939811 | None:intergenic | 45.0% | |
| ! | AGTAGGGGGTAGTGTTTCTA+TGG | + | chr1.3:938019-938038 | MS.gene64023:intron | 45.0% |
| ! | ATGTTTGGTTCCACTTCGAG+AGG | - | chr1.3:936671-936690 | None:intergenic | 45.0% |
| ! | CACTTTCGAAAAGTGCAGTC+TGG | - | chr1.3:940467-940486 | None:intergenic | 45.0% |
| ! | CAGACTGCACTTTTCGAAAG+TGG | + | chr1.3:940465-940484 | MS.gene64023:CDS | 45.0% |
| ! | CCGAGTTTTTCTTCCACCTT+TGG | - | chr1.3:936052-936071 | None:intergenic | 45.0% |
| ! | CGGGAAGGATTCTAAAGACA+AGG | + | chr1.3:940031-940050 | MS.gene64023:CDS | 45.0% |
| ! | GGATGAGAGTGTGAAGCAAA+CGG | + | chr1.3:940428-940447 | MS.gene64023:intron | 45.0% |
| ! | GTGCTTTAGGTGGCACATAA+AGG | - | chr1.3:938893-938912 | None:intergenic | 45.0% |
| ! | GTTGGGGATTTGTGTTTTGC+AGG | + | chr1.3:938797-938816 | MS.gene64023:intron | 45.0% |
| ! | TACAAGTCCTGAGGTGCTTT+AGG | - | chr1.3:938906-938925 | None:intergenic | 45.0% |
| ! | TCATCAGCTTCGTTTGAAGC+AGG | - | chr1.3:940633-940652 | None:intergenic | 45.0% |
| ! | TCCTTGATGATAGGGTGTCT+AGG | - | chr1.3:940284-940303 | None:intergenic | 45.0% |
| !! | AAGCAAAGAGGTTGATGTGG+AGG | + | chr1.3:938320-938339 | MS.gene64023:CDS | 45.0% |
| !! | AGGAGTGTTATCCAATCGGT+TGG | - | chr1.3:940138-940157 | None:intergenic | 45.0% |
| !! | TCGGTGTGTGTTTAGTTCTG+CGG | + | chr1.3:936427-936446 | MS.gene64023:intron | 45.0% |
| !! | TGTAGGCACTGGACAAGATT+AGG | + | chr1.3:936765-936784 | MS.gene64023:intron | 45.0% |
| !!! | AATTTTGGCTCCTCTCGAAG+TGG | + | chr1.3:936658-936677 | MS.gene64023:intron | 45.0% |
| ACTTCTCCGCATTACTGCGA+AGG | - | chr1.3:936241-936260 | None:intergenic | 50.0% | |
| AGACTCGTCGTCTTCATCAG+CGG | - | chr1.3:938349-938368 | None:intergenic | 50.0% | |
| ATACTCTTCCACGTACTCGC+TGG | - | chr1.3:937747-937766 | None:intergenic | 50.0% | |
| ATCTCTGTTCCACGTCCTAG+TGG | - | chr1.3:937701-937720 | None:intergenic | 50.0% | |
| ATGGCTGAGGAATCCAAAGG+AGG | + | chr1.3:938645-938664 | MS.gene64023:CDS | 50.0% | |
| CAACGCCAAGCTTGAAATCC+AGG | + | chr1.3:936829-936848 | MS.gene64023:CDS | 50.0% | |
| CAGTCCTGATGCAACAGTTG+AGG | + | chr1.3:940557-940576 | MS.gene64023:CDS | 50.0% | |
| CCCTATCATCAAGGAACTCC+GGG | + | chr1.3:940289-940308 | MS.gene64023:CDS | 50.0% | |
| CTTCTCCGCATTACTGCGAA+GGG | - | chr1.3:936240-936259 | None:intergenic | 50.0% | |
| GAGATCCCTTCGCAGTAATG+CGG | + | chr1.3:936232-936251 | MS.gene64023:CDS | 50.0% | |
| GCGAAGGGATCTCTTCGAAA+TGG | - | chr1.3:936225-936244 | None:intergenic | 50.0% | |
| TCAATCAGCTGAAAGCCCCA+AGG | + | chr1.3:938507-938526 | MS.gene64023:intron | 50.0% | |
| TCCTCCTCAACTGTTGCATC+AGG | - | chr1.3:940564-940583 | None:intergenic | 50.0% | |
| TCCTGATGCAACAGTTGAGG+AGG | + | chr1.3:940560-940579 | MS.gene64023:CDS | 50.0% | |
| TGAAGACGACGAGTCTTCTG+AGG | + | chr1.3:938353-938372 | MS.gene64023:CDS | 50.0% | |
| TGGAATGAACCACTAGGACG+TGG | + | chr1.3:937689-937708 | MS.gene64023:CDS | 50.0% | |
| ! | AAGTCCTGAGGTGCTTTAGG+TGG | - | chr1.3:938903-938922 | None:intergenic | 50.0% |
| ! | CCCGGAGTTCCTTGATGATA+GGG | - | chr1.3:940292-940311 | None:intergenic | 50.0% |
| ! | CTTTGTCAGTGGACTCGTCA+GGG | - | chr1.3:939267-939286 | None:intergenic | 50.0% |
| ! | GACCCTCCTTGGACACATTT+TGG | - | chr1.3:940004-940023 | None:intergenic | 50.0% |
| ! | TCCAAGGAGGGTCTGAAACT+CGG | + | chr1.3:940011-940030 | MS.gene64023:CDS | 50.0% |
| ! | TCCCGGAGTTCCTTGATGAT+AGG | - | chr1.3:940293-940312 | None:intergenic | 50.0% |
| ! | TCTTTGTCAGTGGACTCGTC+AGG | - | chr1.3:939268-939287 | None:intergenic | 50.0% |
| ! | TGGAGCCACTTTACTGCTGA+AGG | + | chr1.3:938846-938865 | MS.gene64023:CDS | 50.0% |
| !! | AAACTCGGTGCTGTTCCTCA+TGG | + | chr1.3:936064-936083 | MS.gene64023:CDS | 50.0% |
| !! | CCGGTTGTGATTTGGTGTGA+AGG | + | chr1.3:937355-937374 | MS.gene64023:intron | 50.0% |
| !! | GGGAAGCAAAGAGGTTGATG+TGG | + | chr1.3:938317-938336 | MS.gene64023:CDS | 50.0% |
| AAGCATACATGCGCGGCAAG+AGG | + | chr1.3:940243-940262 | MS.gene64023:CDS | 55.0% | |
| AGCATACATGCGCGGCAAGA+GGG | + | chr1.3:940244-940263 | MS.gene64023:CDS | 55.0% | |
| ATCAGCTGAAAGCCCCAAGG+AGG | + | chr1.3:938510-938529 | MS.gene64023:intron | 55.0% | |
| GACTCGTCGTCTTCATCAGC+GGG | - | chr1.3:938348-938367 | None:intergenic | 55.0% | |
| GATCCGTAAGCTTGCCGAAG+AGG | + | chr1.3:939240-939259 | MS.gene64023:CDS | 55.0% | |
| GGTCCTCTTCGGCAAGCTTA+CGG | - | chr1.3:939246-939265 | None:intergenic | 55.0% | |
| ! | ACTCGCTGGCCTCTTCTTTG+AGG | - | chr1.3:937733-937752 | None:intergenic | 55.0% |
| ! | CCAAGGAGGGTCTGAAACTC+GGG | + | chr1.3:940012-940031 | MS.gene64023:CDS | 55.0% |
| ! | CGACGAGTCTTCTGAGGAAG+AGG | + | chr1.3:938359-938378 | MS.gene64023:CDS | 55.0% |
| ! | TGTGCCACCTAAAGCACCTC+AGG | + | chr1.3:938896-938915 | MS.gene64023:CDS | 55.0% |
| AGAAGAGGCCAGCGAGTACG+TGG | + | chr1.3:937736-937755 | MS.gene64023:CDS | 60.0% | |
| CCCGAGTTTCAGACCCTCCT+TGG | - | chr1.3:940015-940034 | None:intergenic | 60.0% | |
| GGACTCGTCAGGGTCCTCTT+CGG | - | chr1.3:939257-939276 | None:intergenic | 60.0% | |
| ! | GGAGGGTCTGAAACTCGGGA+AGG | + | chr1.3:940016-940035 | MS.gene64023:CDS | 60.0% |
| CTGGCGTGCGTGCGTGCATA+AGG | + | chr1.3:937923-937942 | MS.gene64023:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 935739 | 940689 | 935739 | ID=MS.gene64023 |
| chr1.3 | mRNA | 935739 | 940689 | 935739 | ID=MS.gene64023.t1;Parent=MS.gene64023 |
| chr1.3 | exon | 935739 | 935805 | 935739 | ID=MS.gene64023.t1.exon1;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 935739 | 935805 | 935739 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 935996 | 936116 | 935996 | ID=MS.gene64023.t1.exon2;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 935996 | 936116 | 935996 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 936211 | 936364 | 936211 | ID=MS.gene64023.t1.exon3;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 936211 | 936364 | 936211 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 936770 | 936850 | 936770 | ID=MS.gene64023.t1.exon4;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 936770 | 936850 | 936770 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 937205 | 937316 | 937205 | ID=MS.gene64023.t1.exon5;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 937205 | 937316 | 937205 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 937407 | 937533 | 937407 | ID=MS.gene64023.t1.exon6;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 937407 | 937533 | 937407 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 937637 | 937775 | 937637 | ID=MS.gene64023.t1.exon7;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 937637 | 937775 | 937637 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 938267 | 938387 | 938267 | ID=MS.gene64023.t1.exon8;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 938267 | 938387 | 938267 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 938515 | 938711 | 938515 | ID=MS.gene64023.t1.exon9;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 938515 | 938711 | 938515 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 938819 | 939034 | 938819 | ID=MS.gene64023.t1.exon10;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 938819 | 939034 | 938819 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 939130 | 939295 | 939130 | ID=MS.gene64023.t1.exon11;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 939130 | 939295 | 939130 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 939439 | 939577 | 939439 | ID=MS.gene64023.t1.exon12;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 939439 | 939577 | 939439 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 939674 | 939824 | 939674 | ID=MS.gene64023.t1.exon13;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 939674 | 939824 | 939674 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 939930 | 940334 | 939930 | ID=MS.gene64023.t1.exon14;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 939930 | 940334 | 939930 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| chr1.3 | exon | 940429 | 940689 | 940429 | ID=MS.gene64023.t1.exon15;Parent=MS.gene64023.t1 |
| chr1.3 | CDS | 940429 | 940689 | 940429 | ID=cds.MS.gene64023.t1;Parent=MS.gene64023.t1 |
| Gene Sequence |
| Protein sequence |
