Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64225.t1 | XP_003589505.1 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.00E+00 | 1404.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64225.t1 | P35016 | 87.9 | 782 | 94 | 1 | 1 | 781 | 1 | 782 | 0.0e+00 | 1247.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64225.t1 | G7I7Q4 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.0e+00 | 1404.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene64225 | 0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene049567 | MS.gene64225 | 0.815197 | 1.05E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene64225 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene64225 | 0.826354 | 2.84E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene64225 | 0.825502 | 4.53E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene64225 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene64225 | 0.847357 | 1.22E-59 | -1.69E-46 |
| MS.gene051120 | MS.gene64225 | 0.81228 | 4.59E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene64225 | 0.828966 | 6.70E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene64225 | 0.830261 | 3.24E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene64225 | 0.879761 | 9.57E-70 | -1.69E-46 |
| MS.gene051757 | MS.gene64225 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene053094 | MS.gene64225 | 0.820326 | 7.28E-53 | -1.69E-46 |
| MS.gene053151 | MS.gene64225 | 0.815058 | 1.12E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene64225 | 0.803551 | 3.30E-49 | -1.69E-46 |
| MS.gene053647 | MS.gene64225 | 0.808673 | 2.76E-50 | -1.69E-46 |
| MS.gene05410 | MS.gene64225 | 0.809149 | 2.18E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene64225 | 0.807761 | 4.32E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene64225 | 0.855581 | 5.73E-62 | -1.69E-46 |
| MS.gene05468 | MS.gene64225 | 0.806057 | 9.90E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene64225 | 0.802622 | 5.14E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene64225 | 0.804688 | 1.92E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene64225 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene64225 | 0.845224 | 4.64E-59 | -1.69E-46 |
| MS.gene060167 | MS.gene64225 | 0.811108 | 8.26E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene64225 | 0.845089 | 5.05E-59 | -1.69E-46 |
| MS.gene060840 | MS.gene64225 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene06113 | MS.gene64225 | 0.813415 | 2.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38210 | MS.gene64225 | PPI |
| MS.gene62607 | MS.gene64225 | PPI |
| MS.gene020886 | MS.gene64225 | PPI |
| MS.gene81285 | MS.gene64225 | PPI |
| MS.gene63007 | MS.gene64225 | PPI |
| MS.gene026628 | MS.gene64225 | PPI |
| MS.gene64225 | MS.gene30654 | PPI |
| MS.gene81288 | MS.gene64225 | PPI |
| MS.gene49154 | MS.gene64225 | PPI |
| MS.gene58998 | MS.gene64225 | PPI |
| MS.gene38262 | MS.gene64225 | PPI |
| MS.gene81227 | MS.gene64225 | PPI |
| MS.gene38049 | MS.gene64225 | PPI |
| MS.gene59310 | MS.gene64225 | PPI |
| MS.gene026627 | MS.gene64225 | PPI |
| MS.gene64225 | MS.gene62123 | PPI |
| MS.gene020834 | MS.gene64225 | PPI |
| MS.gene38261 | MS.gene64225 | PPI |
| MS.gene64225 | MS.gene006231 | PPI |
| MS.gene64225 | MS.gene75388 | PPI |
| MS.gene37988 | MS.gene64225 | PPI |
| MS.gene040499 | MS.gene64225 | PPI |
| MS.gene061126 | MS.gene64225 | PPI |
| MS.gene33593 | MS.gene64225 | PPI |
| MS.gene37989 | MS.gene64225 | PPI |
| MS.gene60613 | MS.gene64225 | PPI |
| MS.gene75389 | MS.gene64225 | PPI |
| MS.gene020833 | MS.gene64225 | PPI |
| MS.gene029690 | MS.gene64225 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64225.t1 | MTR_1g025430 | 99.511 | 818 | 4 | 0 | 1 | 818 | 1 | 818 | 0.0 | 1644 |
| MS.gene64225.t1 | MTR_6g452990 | 49.508 | 711 | 317 | 7 | 75 | 780 | 2 | 675 | 0.0 | 648 |
| MS.gene64225.t1 | MTR_1g099840 | 47.743 | 731 | 327 | 9 | 75 | 799 | 7 | 688 | 0.0 | 635 |
| MS.gene64225.t1 | MTR_5g096430 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene64225.t1 | MTR_5g096460 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene64225.t1 | MTR_5g097320 | 46.164 | 743 | 345 | 15 | 77 | 804 | 89 | 791 | 0.0 | 597 |
| MS.gene64225.t1 | MTR_0009s0390 | 44.912 | 737 | 352 | 15 | 76 | 801 | 80 | 773 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64225.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1244 |
| MS.gene64225.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1243 |
| MS.gene64225.t1 | AT5G52640 | 49.041 | 730 | 330 | 8 | 75 | 799 | 2 | 694 | 0.0 | 648 |
| MS.gene64225.t1 | AT5G56000 | 47.765 | 716 | 333 | 7 | 75 | 786 | 2 | 680 | 0.0 | 627 |
| MS.gene64225.t1 | AT5G56010 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 617 |
| MS.gene64225.t1 | AT5G56030 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 616 |
| MS.gene64225.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64225.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64225.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene64225.t1 | AT2G04030 | 45.200 | 750 | 338 | 17 | 75 | 799 | 74 | 775 | 0.0 | 602 |
| MS.gene64225.t1 | AT5G56030 | 46.049 | 734 | 326 | 8 | 75 | 775 | 2 | 698 | 0.0 | 601 |
| MS.gene64225.t1 | AT2G04030 | 45.067 | 750 | 336 | 17 | 75 | 799 | 74 | 772 | 0.0 | 598 |
Find 170 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGGTAAAGAATT+TGG | 0.100722 | 1.3:+1003017 | MS.gene64225:CDS |
| CCTTACTGATAAAGACATTT+TGG | 0.114774 | 1.3:+1002546 | MS.gene64225:CDS |
| CTCAATCTAATTGGGCAATT+TGG | 0.152816 | 1.3:+1003189 | MS.gene64225:CDS |
| GACCCTCCTTGGACACATTT+TGG | 0.171757 | 1.3:-1005751 | None:intergenic |
| TTAACTTCCCTATCTATATC+TGG | 0.204471 | 1.3:+1004045 | MS.gene64225:CDS |
| AGCTGAAGTTTCAAGGCTTA+TGG | 0.218402 | 1.3:+1002021 | MS.gene64225:CDS |
| AGTGGTGATCTCAATCTAAT+TGG | 0.239122 | 1.3:+1003180 | MS.gene64225:CDS |
| TTCATCTTCACTTTCCTCCT+TGG | 0.262279 | 1.3:-1004274 | None:intergenic |
| TCATCTTCACTTTCCTCCTT+GGG | 0.274450 | 1.3:-1004273 | None:intergenic |
| TCTTCCTCTGTAACCTCCTT+TGG | 0.284101 | 1.3:-1004408 | None:intergenic |
| GAGGATTTGGTAAAGAATTT+GGG | 0.292920 | 1.3:+1003018 | MS.gene64225:CDS |
| CAATTCACTTTACAGTAATA+AGG | 0.298653 | 1.3:+1002054 | MS.gene64225:CDS |
| ACCAAGTTCTGGAATGAGTT+TGG | 0.314376 | 1.3:+1005230 | MS.gene64225:CDS |
| TTGCTTCCCCAGATATAGAT+AGG | 0.331375 | 1.3:-1004053 | None:intergenic |
| TGCATCAAGTATTCATCAAC+TGG | 0.336633 | 1.3:-1005698 | None:intergenic |
| CCACTTAGTTAGATCCTTGA+AGG | 0.361563 | 1.3:-1005816 | None:intergenic |
| TGGTATGACAAAGGAGGATT+TGG | 0.366719 | 1.3:+1003005 | MS.gene64225:CDS |
| ATCTGACTTTCAGGTATGTA+TGG | 0.368320 | 1.3:+1003374 | MS.gene64225:intron |
| CCCGAGTTTCAGACCCTCCT+TGG | 0.369926 | 1.3:-1005762 | None:intergenic |
| CTCGTCTAACATACAACTTC+AGG | 0.373088 | 1.3:-1004706 | None:intergenic |
| GTAGTGGTGACATCAAAATT+TGG | 0.373244 | 1.3:+1005911 | MS.gene64225:CDS |
| CTTCTTCTTCTCGCAGATCA+AGG | 0.377003 | 1.3:+1001534 | MS.gene64225:CDS |
| GAGGTCAATACACCAAGTTC+TGG | 0.382290 | 1.3:+1005219 | MS.gene64225:CDS |
| TCTTTGTCAGTGGACTCGTC+AGG | 0.385604 | 1.3:-1005015 | None:intergenic |
| TAAATGATGTGAAGGCTATA+TGG | 0.388507 | 1.3:+1004376 | MS.gene64225:CDS |
| TCCAAACTCATTCCAGAACT+TGG | 0.392555 | 1.3:-1005231 | None:intergenic |
| TACAAGTCCTGAGGTGCTTT+AGG | 0.402740 | 1.3:-1004653 | None:intergenic |
| AGTTTCAAGCTGAAGTTTCA+AGG | 0.404580 | 1.3:+1002014 | MS.gene64225:CDS |
| TTGGGTACCATAGCAAAATC+TGG | 0.405084 | 1.3:+1003036 | MS.gene64225:CDS |
| TGTAGGCACTGGACAAGATT+AGG | 0.406249 | 1.3:+1002515 | MS.gene64225:intron |
| TCCCGGAGTTCCTTGATGAT+AGG | 0.409122 | 1.3:-1006040 | None:intergenic |
| GGTCCTCTTCGGCAAGCTTA+CGG | 0.422206 | 1.3:-1004993 | None:intergenic |
| ACTCGCTGGCCTCTTCTTTG+AGG | 0.426467 | 1.3:-1003480 | None:intergenic |
| CCAAAATGTCTTTATCAGTA+AGG | 0.426746 | 1.3:-1002546 | None:intergenic |
| GTAAAGTGGCTCCATGATAA+AGG | 0.427105 | 1.3:-1004587 | None:intergenic |
| GTGCTTTAGGTGGCACATAA+AGG | 0.430754 | 1.3:-1004640 | None:intergenic |
| TGGAACCAGCAAAGAACAAC+TGG | 0.432951 | 1.3:+1005508 | MS.gene64225:CDS |
| GCGATGACAAACCTTTATCA+TGG | 0.434104 | 1.3:+1004576 | MS.gene64225:CDS |
| TCCTCCTCAACTGTTGCATC+AGG | 0.444473 | 1.3:-1006311 | None:intergenic |
| TCTTATCTTCATAATCCATC+AGG | 0.444687 | 1.3:-1005724 | None:intergenic |
| TCTATTAGAGACAGAGGTAT+TGG | 0.445475 | 1.3:+1002985 | MS.gene64225:CDS |
| ATAGCAAAATCTGGAACTTC+AGG | 0.446829 | 1.3:+1003045 | MS.gene64225:CDS |
| CAACGCCAAGCTTGAAATCC+AGG | 0.454983 | 1.3:+1002579 | MS.gene64225:CDS |
| TAACTTCCCTATCTATATCT+GGG | 0.461417 | 1.3:+1004046 | MS.gene64225:CDS |
| ATTTCTCGTGATACATTCAA+TGG | 0.461649 | 1.3:-1004904 | None:intergenic |
| CCAAGGAGGGTCTGAAACTC+GGG | 0.464941 | 1.3:+1005762 | MS.gene64225:CDS |
| TTCTAAAGACAAGGAACTAA+AGG | 0.470485 | 1.3:+1005790 | MS.gene64225:CDS |
| ACAAACCTGGATTTCAAGCT+TGG | 0.470570 | 1.3:-1002584 | None:intergenic |
| TTTGGAAAATCTATTAAACT+TGG | 0.471577 | 1.3:+1005248 | MS.gene64225:CDS |
| TACCTCTGTCTCTAATAGAT+AGG | 0.475363 | 1.3:-1002981 | None:intergenic |
| GAGAGAAGAAGAAGAGTGGA+AGG | 0.480182 | 1.3:-1001507 | None:intergenic |
| TCCAAGGAGGGTCTGAAACT+CGG | 0.480470 | 1.3:+1005761 | MS.gene64225:CDS |
| CTAATTGGGCAATTTGGAGT+TGG | 0.481464 | 1.3:+1003195 | MS.gene64225:CDS |
| AATTCTAGAAGCAAAATCCT+TGG | 0.482964 | 1.3:-1006255 | None:intergenic |
| GGAACTAAAGGAATCCTTCA+AGG | 0.484459 | 1.3:+1005802 | MS.gene64225:CDS |
| CCCGGAGTTCCTTGATGATA+GGG | 0.484538 | 1.3:-1006039 | None:intergenic |
| CCTCTTGACAACATCTGAAT+CGG | 0.488306 | 1.3:-1001845 | None:intergenic |
| TTGCAATTTCAGAAGATACA+TGG | 0.492822 | 1.3:+1003419 | MS.gene64225:CDS |
| CATCTTCACTTTCCTCCTTG+GGG | 0.498254 | 1.3:-1004272 | None:intergenic |
| CAAGCTTACGGATCATATCA+AGG | 0.500174 | 1.3:-1004981 | None:intergenic |
| GTGGTGATCTCAATCTAATT+GGG | 0.500326 | 1.3:+1003181 | MS.gene64225:CDS |
| CTTTGTCAGTGGACTCGTCA+GGG | 0.500986 | 1.3:-1005014 | None:intergenic |
| TTCTTCAGACGCTCAAGGAA+TGG | 0.506178 | 1.3:-1005539 | None:intergenic |
| AAGAGAGAGAAGAAGAAGAG+TGG | 0.506230 | 1.3:-1001511 | None:intergenic |
| CACAAGGAGTGTTATCCAAT+CGG | 0.507998 | 1.3:-1005889 | None:intergenic |
| ATTCTAGAAGCAAAATCCTT+GGG | 0.509254 | 1.3:-1006254 | None:intergenic |
| CGACGAGTCTTCTGAGGAAG+AGG | 0.516292 | 1.3:+1004109 | MS.gene64225:CDS |
| TGGTGGATCTACTACTTCAT+CGG | 0.517594 | 1.3:-1001779 | None:intergenic |
| TCATCAGCTTCGTTTGAAGC+AGG | 0.518350 | 1.3:-1006380 | None:intergenic |
| GACTCGTCGTCTTCATCAGC+GGG | 0.518353 | 1.3:-1004095 | None:intergenic |
| CTGTCATTGCAATGAGGAAG+TGG | 0.518703 | 1.3:+1001478 | None:intergenic |
| ATTTGGTTGGAGTGCAAACA+TGG | 0.519357 | 1.3:+1005928 | MS.gene64225:CDS |
| CACTTTCGAAAAGTGCAGTC+TGG | 0.519596 | 1.3:-1006214 | None:intergenic |
| TGATAAACGATTTCTGTTGG+TGG | 0.522059 | 1.3:-1005285 | None:intergenic |
| CATCGACATTGTCATTTGCA+AGG | 0.523230 | 1.3:-1005850 | None:intergenic |
| TACATATCTAGAATGAAAGC+TGG | 0.527032 | 1.3:+1005461 | MS.gene64225:CDS |
| CAAAATGTCTTTATCAGTAA+GGG | 0.527688 | 1.3:-1002545 | None:intergenic |
| GGAAGATGAGACTGAAGTTG+AGG | 0.531983 | 1.3:+1006331 | MS.gene64225:CDS |
| CCCTATCATCAAGGAACTCC+GGG | 0.533736 | 1.3:+1006039 | MS.gene64225:CDS |
| TGTGCCACCTAAAGCACCTC+AGG | 0.535240 | 1.3:+1004646 | MS.gene64225:CDS |
| GATGCAGATTAAGTTAGATA+AGG | 0.535990 | 1.3:+1002948 | MS.gene64225:intron |
| TGTCTTTATCAGTAAGGGAT+AGG | 0.536994 | 1.3:-1002540 | None:intergenic |
| CATCACCTTCAGCAGTAAAG+TGG | 0.538199 | 1.3:-1004601 | None:intergenic |
| GTATGGGAATCTAAAGCTGA+TGG | 0.541849 | 1.3:+1003391 | MS.gene64225:CDS |
| ACCCTATCATCAAGGAACTC+CGG | 0.542750 | 1.3:+1006038 | MS.gene64225:CDS |
| TATTAAACTTGGTATCATTG+AGG | 0.544026 | 1.3:+1005259 | MS.gene64225:CDS |
| ATACTCTTCCACGTACTCGC+TGG | 0.546272 | 1.3:-1003494 | None:intergenic |
| GGATGAGAGTGTGAAGCAAA+CGG | 0.547097 | 1.3:+1006178 | MS.gene64225:intron |
| AAGCATACATGCGCGGCAAG+AGG | 0.548258 | 1.3:+1005993 | MS.gene64225:CDS |
| AAACTCGGTGCTGTTCCTCA+TGG | 0.549531 | 1.3:+1001814 | MS.gene64225:CDS |
| TGGTGACATCAAAATTTGGT+TGG | 0.549849 | 1.3:+1005915 | MS.gene64225:CDS |
| GGACTCGTCAGGGTCCTCTT+CGG | 0.550477 | 1.3:-1005004 | None:intergenic |
| ATCGACATTGTCATTTGCAA+GGG | 0.551505 | 1.3:-1005849 | None:intergenic |
| AGAAGAGGCCAGCGAGTACG+TGG | 0.552899 | 1.3:+1003486 | MS.gene64225:CDS |
| GATCCGTAAGCTTGCCGAAG+AGG | 0.555543 | 1.3:+1004990 | MS.gene64225:CDS |
| TGCTTCCCCAGATATAGATA+GGG | 0.556945 | 1.3:-1004052 | None:intergenic |
| AGCATACATGCGCGGCAAGA+GGG | 0.557652 | 1.3:+1005994 | MS.gene64225:CDS |
| TTTCTTGTTGAATGATCCCA+AGG | 0.558398 | 1.3:+1006238 | MS.gene64225:CDS |
| TGTGAAGATATCCAACCGAT+TGG | 0.558827 | 1.3:+1005874 | MS.gene64225:CDS |
| AGGAGTGTTATCCAATCGGT+TGG | 0.561154 | 1.3:-1005885 | None:intergenic |
| TGTGTGTGAATGAAGGGAAT+CGG | 0.561471 | 1.3:+1001946 | MS.gene64225:intron |
| TAGAATGAAAGCTGGACAGA+AGG | 0.562025 | 1.3:+1005469 | MS.gene64225:CDS |
| GAAGTTCCAAAATGTGTCCA+AGG | 0.562529 | 1.3:+1005745 | MS.gene64225:CDS |
| TCCACTGACAAAGAAAAGAA+AGG | 0.563357 | 1.3:+1005024 | MS.gene64225:CDS |
| TGGAGCCACTTTACTGCTGA+AGG | 0.565774 | 1.3:+1004596 | MS.gene64225:CDS |
| GGTTCTTAACTACTCTCTCC+CGG | 0.565871 | 1.3:-1006057 | None:intergenic |
| TAAAATACACCTCAAAGAAG+AGG | 0.565903 | 1.3:+1003471 | MS.gene64225:CDS |
| TGTCAATTTACCCTCAGACT+TGG | 0.566708 | 1.3:-1005426 | None:intergenic |
| TCCTTGATGATAGGGTGTCT+AGG | 0.566886 | 1.3:-1006031 | None:intergenic |
| CGGGAAGGATTCTAAAGACA+AGG | 0.569516 | 1.3:+1005781 | MS.gene64225:CDS |
| TATTTACAGCACCAAGTCTG+AGG | 0.569728 | 1.3:+1005415 | MS.gene64225:intron |
| TCCTAGACACCCTATCATCA+AGG | 0.573259 | 1.3:+1006030 | MS.gene64225:CDS |
| TCTAACATACAACTTCAGGT+TGG | 0.576509 | 1.3:-1004702 | None:intergenic |
| ACTTCTCCGCATTACTGCGA+AGG | 0.578324 | 1.3:-1001988 | None:intergenic |
| ATCTCTGTTCCACGTCCTAG+TGG | 0.579957 | 1.3:-1003448 | None:intergenic |
| TGCTTCAAACGAAGCTGATG+AGG | 0.581857 | 1.3:+1006382 | MS.gene64225:CDS |
| AGTAGTAGATCCACCAAAGG+TGG | 0.582933 | 1.3:+1001786 | MS.gene64225:CDS |
| GGAACTCTTAAATGATGTGA+AGG | 0.585981 | 1.3:+1004368 | MS.gene64225:CDS |
| TCCTGATGCAACAGTTGAGG+AGG | 0.586304 | 1.3:+1006310 | MS.gene64225:CDS |
| CAGTCCTGATGCAACAGTTG+AGG | 0.589745 | 1.3:+1006307 | MS.gene64225:CDS |
| TCTGACTTTCAGGTATGTAT+GGG | 0.590095 | 1.3:+1003375 | MS.gene64225:intron |
| TCAAGGATCTAACTAAGTGG+TGG | 0.593513 | 1.3:+1005819 | MS.gene64225:CDS |
| CTTCTCCGCATTACTGCGAA+GGG | 0.594891 | 1.3:-1001987 | None:intergenic |
| ATTCTACCACTCTCTTGCCA+AGG | 0.602333 | 1.3:+1004440 | MS.gene64225:CDS |
| TTCCAAAATGTGTCCAAGGA+GGG | 0.604051 | 1.3:+1005749 | MS.gene64225:CDS |
| CAGAGGTATTGGTATGACAA+AGG | 0.604095 | 1.3:+1002996 | MS.gene64225:CDS |
| AAATTTCAAGCGAATGCGGA+AGG | 0.606036 | 1.3:+1001751 | MS.gene64225:CDS |
| AGACTCGTCGTCTTCATCAG+CGG | 0.606434 | 1.3:-1004096 | None:intergenic |
| TTTGATGTCACCACTACACA+AGG | 0.606525 | 1.3:-1005905 | None:intergenic |
| GGGAAGCAAAGAGGTTGATG+TGG | 0.608554 | 1.3:+1004067 | MS.gene64225:CDS |
| TGAAGACGACGAGTCTTCTG+AGG | 0.608975 | 1.3:+1004103 | MS.gene64225:CDS |
| AAGCAAAGAGGTTGATGTGG+AGG | 0.610301 | 1.3:+1004070 | MS.gene64225:CDS |
| ATACTTGATGCAATACCTGA+TGG | 0.612459 | 1.3:+1005709 | MS.gene64225:CDS |
| GCCTAAAACAAAGACAGTGA+AGG | 0.613840 | 1.3:+1004329 | MS.gene64225:CDS |
| CCTTCAAGGATCTAACTAAG+TGG | 0.614149 | 1.3:+1005816 | MS.gene64225:CDS |
| ATTTACAGCACCAAGTCTGA+GGG | 0.614924 | 1.3:+1005416 | MS.gene64225:intron |
| GAATCCAAAGGAGGTTACAG+AGG | 0.616769 | 1.3:+1004404 | MS.gene64225:CDS |
| GAGATCCCTTCGCAGTAATG+CGG | 0.618086 | 1.3:+1001982 | MS.gene64225:CDS |
| AACTTCCCTATCTATATCTG+GGG | 0.620396 | 1.3:+1004047 | MS.gene64225:CDS |
| ATCCTATCTATTAGAGACAG+AGG | 0.620781 | 1.3:+1002979 | MS.gene64225:CDS |
| CCGATTCAGATGTTGTCAAG+AGG | 0.623522 | 1.3:+1001845 | MS.gene64225:CDS |
| AAGCTTACGGATCATATCAA+GGG | 0.627367 | 1.3:-1004980 | None:intergenic |
| TGGAATGAACCACTAGGACG+TGG | 0.627795 | 1.3:+1003439 | MS.gene64225:CDS |
| TCTCTTCTCATCAACATCAG+AGG | 0.630151 | 1.3:-1005198 | None:intergenic |
| CTATATCTGGGGAAGCAAAG+AGG | 0.633804 | 1.3:+1004058 | MS.gene64225:CDS |
| ATGTGAAGGCTATATGGCTG+AGG | 0.634531 | 1.3:+1004382 | MS.gene64225:CDS |
| GTTGAGAAAATGCAGACAAG+TGG | 0.638859 | 1.3:+1003162 | MS.gene64225:CDS |
| AAGTCCTGAGGTGCTTTAGG+TGG | 0.640658 | 1.3:-1004650 | None:intergenic |
| TCAATCAGCTGAAAGCCCCA+AGG | 0.640725 | 1.3:+1004257 | MS.gene64225:intron |
| TCTGATGTTGATGAGAAGAG+AGG | 0.646244 | 1.3:+1005200 | MS.gene64225:CDS |
| ATATTACCTTGGCAAGAGAG+TGG | 0.647445 | 1.3:-1004446 | None:intergenic |
| GCATCAAGTATTCATCAACT+GGG | 0.657313 | 1.3:-1005697 | None:intergenic |
| TGAAGGAAACGACTTACGAG+TGG | 0.661856 | 1.3:+1004346 | MS.gene64225:CDS |
| AAATGACGATGGTGATGTCA+AGG | 0.662375 | 1.3:+1006406 | MS.gene64225:CDS |
| GTTCCAAAATGTGTCCAAGG+AGG | 0.663752 | 1.3:+1005748 | MS.gene64225:CDS |
| GAAGGAAACGACTTACGAGT+GGG | 0.669364 | 1.3:+1004347 | MS.gene64225:CDS |
| AGGTATTGGTATGACAAAGG+AGG | 0.676241 | 1.3:+1002999 | MS.gene64225:CDS |
| GGATAACACTCCTTGTGTAG+TGG | 0.678484 | 1.3:+1005895 | MS.gene64225:CDS |
| GCAAAGTGTCAGAATCAACA+AGG | 0.678755 | 1.3:-1004882 | None:intergenic |
| GGAGGGTCTGAAACTCGGGA+AGG | 0.685274 | 1.3:+1005766 | MS.gene64225:CDS |
| GATACATGGAATGAACCACT+AGG | 0.687380 | 1.3:+1003433 | MS.gene64225:CDS |
| TAACTCTCGTACAAGTCCTG+AGG | 0.691370 | 1.3:-1004662 | None:intergenic |
| TGAAGTAGTAGATCCACCAA+AGG | 0.692806 | 1.3:+1001783 | MS.gene64225:CDS |
| ATCAGCTGAAAGCCCCAAGG+AGG | 0.696234 | 1.3:+1004260 | MS.gene64225:intron |
| ATGGCTGAGGAATCCAAAGG+AGG | 0.701467 | 1.3:+1004395 | MS.gene64225:CDS |
| GAATCGGTTGAAAGTCCATG+AGG | 0.719230 | 1.3:-1001829 | None:intergenic |
| TATATGGCTGAGGAATCCAA+AGG | 0.735087 | 1.3:+1004392 | MS.gene64225:CDS |
| GCTGATGAGGTAAATGACGA+TGG | 0.743848 | 1.3:+1006395 | MS.gene64225:CDS |
| CATTTGAAATCAGTTCCCTG+AGG | 0.745225 | 1.3:-1002084 | None:intergenic |
| GAGAGTAGTTAAGAACCCTG+AGG | 0.757743 | 1.3:+1006063 | MS.gene64225:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTGTTTATCTAAAAA+AGG | + | chr1.3:1002905-1002924 | MS.gene64225:intron | 10.0% |
| !! | ATACAAGTATGTATAATTTA+AGG | + | chr1.3:1004132-1004151 | MS.gene64225:intron | 15.0% |
| !! | CAATAAAAAAGAAACTTATT+AGG | + | chr1.3:1004953-1004972 | MS.gene64225:CDS | 15.0% |
| !! | TATAATAAAAGTGATAGTTT+GGG | - | chr1.3:1003535-1003554 | None:intergenic | 15.0% |
| !! | TTATAATAAAAGTGATAGTT+TGG | - | chr1.3:1003536-1003555 | None:intergenic | 15.0% |
| !! | TTATCTATTCAATATACAAT+TGG | + | chr1.3:1003953-1003972 | MS.gene64225:intron | 15.0% |
| !!! | TAAATGAAAATTTGTTTGTT+AGG | + | chr1.3:1001724-1001743 | MS.gene64225:intron | 15.0% |
| !! | ACAAATAAGTTCTATATTGT+AGG | + | chr1.3:1002498-1002517 | MS.gene64225:intron | 20.0% |
| !! | ATAATAAAAGTGATAGTTTG+GGG | - | chr1.3:1003534-1003553 | None:intergenic | 20.0% |
| !! | ATAATTAAAGTATACAAACC+TGG | - | chr1.3:1002600-1002619 | None:intergenic | 20.0% |
| !! | ATCGTATACAATAATAAGTA+GGG | + | chr1.3:1003753-1003772 | MS.gene64225:intron | 20.0% |
| !! | ATGTACAAATTATAAATGCA+AGG | - | chr1.3:1002457-1002476 | None:intergenic | 20.0% |
| !! | ATGTTGAAGACATAAAATAA+GGG | - | chr1.3:1006119-1006138 | None:intergenic | 20.0% |
| !! | GGTTAAATTAAATTATCACA+GGG | + | chr1.3:1003824-1003843 | MS.gene64225:intron | 20.0% |
| !! | GTCAAAATAAATACAATTTC+TGG | - | chr1.3:1005621-1005640 | None:intergenic | 20.0% |
| !! | TATCGTATACAATAATAAGT+AGG | + | chr1.3:1003752-1003771 | MS.gene64225:intron | 20.0% |
| !! | TATGTTGAAGACATAAAATA+AGG | - | chr1.3:1006120-1006139 | None:intergenic | 20.0% |
| !! | TGAATAGGTAAAATTGATTA+TGG | + | chr1.3:1002210-1002229 | MS.gene64225:intron | 20.0% |
| !! | TTTGGAAAATCTATTAAACT+TGG | + | chr1.3:1005248-1005267 | MS.gene64225:CDS | 20.0% |
| !!! | CTTAACTTGTAAAACTATTT+GGG | + | chr1.3:1002764-1002783 | MS.gene64225:intron | 20.0% |
| !!! | TGTTTTAATGCTGTTTTAAT+GGG | + | chr1.3:1002703-1002722 | MS.gene64225:intron | 20.0% |
| !!! | TGTTTTAATGGGTTTATTTT+TGG | + | chr1.3:1002714-1002733 | MS.gene64225:intron | 20.0% |
| !!! | TTCTTAACAAATGTTCTTTT+TGG | + | chr1.3:1004845-1004864 | MS.gene64225:intron | 20.0% |
| !!! | TTGATGATACTTATAATGTT+GGG | + | chr1.3:1004530-1004549 | MS.gene64225:intron | 20.0% |
| !!! | TTTTTTTCAATATATGCTAC+AGG | + | chr1.3:1005658-1005677 | MS.gene64225:intron | 20.0% |
| ! | ACATTGTTAACTGATGAAAT+GGG | - | chr1.3:1005378-1005397 | None:intergenic | 25.0% |
| ! | AGATCATTTCCAAAATCAAT+AGG | - | chr1.3:1003358-1003377 | None:intergenic | 25.0% |
| ! | ATATCTTTATATGTTCCGTT+GGG | - | chr1.3:1004494-1004513 | None:intergenic | 25.0% |
| ! | ATTAAAACACCATCATTCTT+TGG | - | chr1.3:1002692-1002711 | None:intergenic | 25.0% |
| ! | CAAAATGTCTTTATCAGTAA+GGG | - | chr1.3:1002548-1002567 | None:intergenic | 25.0% |
| ! | CAATTCACTTTACAGTAATA+AGG | + | chr1.3:1002054-1002073 | MS.gene64225:CDS | 25.0% |
| ! | CCTATAAGAGTTAAATAACA+AGG | - | chr1.3:1005344-1005363 | None:intergenic | 25.0% |
| ! | GCTTATATGAACTTATCTAT+TGG | + | chr1.3:1002741-1002760 | MS.gene64225:intron | 25.0% |
| ! | GGGTTAAATTAAATTATCAC+AGG | + | chr1.3:1003823-1003842 | MS.gene64225:intron | 25.0% |
| ! | GTATAATTTAAGGATTCAGT+TGG | + | chr1.3:1004142-1004161 | MS.gene64225:intron | 25.0% |
| ! | TACATTGTTAACTGATGAAA+TGG | - | chr1.3:1005379-1005398 | None:intergenic | 25.0% |
| ! | TATTAAACTTGGTATCATTG+AGG | + | chr1.3:1005259-1005278 | MS.gene64225:CDS | 25.0% |
| ! | TCGTATACAATAATAAGTAG+GGG | + | chr1.3:1003754-1003773 | MS.gene64225:intron | 25.0% |
| ! | TCTGCATCAAAAGTTAAAAT+TGG | - | chr1.3:1005170-1005189 | None:intergenic | 25.0% |
| ! | TGAGAAACCATAAAAGAATT+AGG | - | chr1.3:1005087-1005106 | None:intergenic | 25.0% |
| ! | TGATGATACTTATAATGTTG+GGG | + | chr1.3:1004531-1004550 | MS.gene64225:intron | 25.0% |
| ! | TTTATGTCTTCAACATAGTT+GGG | + | chr1.3:1006123-1006142 | MS.gene64225:intron | 25.0% |
| !! | AATTGATTTACATGTATGGT+TGG | - | chr1.3:1002372-1002391 | None:intergenic | 25.0% |
| !! | CAAGAATCCTAATTCTTTTA+TGG | + | chr1.3:1005077-1005096 | MS.gene64225:intron | 25.0% |
| !! | CTTACTGATAAAGACATTTT+GGG | + | chr1.3:1002547-1002566 | MS.gene64225:CDS | 25.0% |
| !! | CTTGATGATACTTATAATGT+TGG | + | chr1.3:1004529-1004548 | MS.gene64225:intron | 25.0% |
| !! | GGATTTTCAAAGTATATGTT+TGG | - | chr1.3:1002436-1002455 | None:intergenic | 25.0% |
| !! | GTAGAATTGATTTACATGTA+TGG | - | chr1.3:1002376-1002395 | None:intergenic | 25.0% |
| !! | TAATAAGGATATTTTCCTCA+GGG | + | chr1.3:1002069-1002088 | MS.gene64225:CDS | 25.0% |
| !! | TCAGGTATGTATATAGTTTT+GGG | + | chr1.3:1003063-1003082 | MS.gene64225:intron | 25.0% |
| !! | TTCAGGTATGTATATAGTTT+TGG | + | chr1.3:1003062-1003081 | MS.gene64225:intron | 25.0% |
| !! | TTTTATGTCTTCAACATAGT+TGG | + | chr1.3:1006122-1006141 | MS.gene64225:intron | 25.0% |
| !! | TTTTGATAAACGATTTCTGT+TGG | - | chr1.3:1005291-1005310 | None:intergenic | 25.0% |
| !!! | CAAGTTAGAATTGATTTTGA+CGG | + | chr1.3:1002321-1002340 | MS.gene64225:intron | 25.0% |
| !!! | CCTTGTTATTTAACTCTTAT+AGG | + | chr1.3:1005341-1005360 | MS.gene64225:intron | 25.0% |
| !!! | CTGTAGGTTTTTTAATGATA+AGG | + | chr1.3:1002665-1002684 | MS.gene64225:intron | 25.0% |
| !!! | GCTTAACTTGTAAAACTATT+TGG | + | chr1.3:1002763-1002782 | MS.gene64225:intron | 25.0% |
| !!! | GTGTTTTAATGCTGTTTTAA+TGG | + | chr1.3:1002702-1002721 | MS.gene64225:intron | 25.0% |
| !!! | TAATAACTTCTGTTTTTCAC+AGG | + | chr1.3:1003995-1004014 | MS.gene64225:intron | 25.0% |
| !!! | TACGCTTTTAGAATCAATTT+TGG | + | chr1.3:1002393-1002412 | MS.gene64225:intron | 25.0% |
| !!! | TGATTTTAAAATCAAGCAAC+TGG | - | chr1.3:1003559-1003578 | None:intergenic | 25.0% |
| !!! | TTCTTTATTTTTCACTGCAT+GGG | + | chr1.3:1003611-1003630 | MS.gene64225:intron | 25.0% |
| AAACTTCAGGAAACATAGTT+AGG | - | chr1.3:1003876-1003895 | None:intergenic | 30.0% | |
| AAGCTAACATGGAAAACTTA+TGG | - | chr1.3:1002829-1002848 | None:intergenic | 30.0% | |
| ACAAGCTGAAAACATATAAG+CGG | - | chr1.3:1002804-1002823 | None:intergenic | 30.0% | |
| ACTATTTATGTGATACCCAA+CGG | + | chr1.3:1004476-1004495 | MS.gene64225:intron | 30.0% | |
| ACTCAAAAAGCTCAAATACT+TGG | - | chr1.3:1004765-1004784 | None:intergenic | 30.0% | |
| ATAAAGATATCCACTTCTCT+TGG | + | chr1.3:1004504-1004523 | MS.gene64225:intron | 30.0% | |
| ATGTCAACAATTTAACTCTC+TGG | + | chr1.3:1003654-1003673 | MS.gene64225:intron | 30.0% | |
| ATTGAAATGTGTGTGAATGA+AGG | + | chr1.3:1001939-1001958 | MS.gene64225:intron | 30.0% | |
| ATTTCTCGTGATACATTCAA+TGG | - | chr1.3:1004907-1004926 | None:intergenic | 30.0% | |
| CATTGTTAACTGATGAAATG+GGG | - | chr1.3:1005377-1005396 | None:intergenic | 30.0% | |
| CCAAAATGTCTTTATCAGTA+AGG | - | chr1.3:1002549-1002568 | None:intergenic | 30.0% | |
| CGTATACAATAATAAGTAGG+GGG | + | chr1.3:1003755-1003774 | MS.gene64225:intron | 30.0% | |
| CTCAAAAAGCTCAAATACTT+GGG | - | chr1.3:1004764-1004783 | None:intergenic | 30.0% | |
| CTTAGAAGGTAAACTCTTAT+GGG | + | chr1.3:1003803-1003822 | MS.gene64225:intron | 30.0% | |
| GAAGTTAGAATGTAAAGCTT+TGG | - | chr1.3:1002302-1002321 | None:intergenic | 30.0% | |
| GAGTTAAATTGTTGACATCT+AGG | - | chr1.3:1003652-1003671 | None:intergenic | 30.0% | |
| GATATCTTTATATGTTCCGT+TGG | - | chr1.3:1004495-1004514 | None:intergenic | 30.0% | |
| GATGCAGATTAAGTTAGATA+AGG | + | chr1.3:1002948-1002967 | MS.gene64225:intron | 30.0% | |
| GCTGATTGAAGAGTAAAATA+TGG | - | chr1.3:1004246-1004265 | None:intergenic | 30.0% | |
| GTTTCCTGAAGTTTAAAAGA+TGG | + | chr1.3:1003882-1003901 | MS.gene64225:intron | 30.0% | |
| TAAAATACACCTCAAAGAAG+AGG | + | chr1.3:1003471-1003490 | MS.gene64225:CDS | 30.0% | |
| TAAATGATGTGAAGGCTATA+TGG | + | chr1.3:1004376-1004395 | MS.gene64225:CDS | 30.0% | |
| TAACTTCCCTATCTATATCT+GGG | + | chr1.3:1004046-1004065 | MS.gene64225:CDS | 30.0% | |
| TCAAAAATTTCAAGCGAATG+CGG | + | chr1.3:1001747-1001766 | MS.gene64225:CDS | 30.0% | |
| TCTGAAGAAGAAAAACTTTG+AGG | + | chr1.3:1005553-1005572 | MS.gene64225:CDS | 30.0% | |
| TCTTATCTTCATAATCCATC+AGG | - | chr1.3:1005727-1005746 | None:intergenic | 30.0% | |
| TGACAAAGAAAAGAAAGGTA+TGG | + | chr1.3:1005029-1005048 | MS.gene64225:intron | 30.0% | |
| TTAAATTATCACAGGGTGAT+TGG | + | chr1.3:1003831-1003850 | MS.gene64225:intron | 30.0% | |
| TTAACTTCCCTATCTATATC+TGG | + | chr1.3:1004045-1004064 | MS.gene64225:CDS | 30.0% | |
| TTACGCACATTTCATTTCAA+TGG | + | chr1.3:1001687-1001706 | MS.gene64225:intron | 30.0% | |
| TTGAAATGTGTGTGAATGAA+GGG | + | chr1.3:1001940-1001959 | MS.gene64225:intron | 30.0% | |
| TTGCAATTTCAGAAGATACA+TGG | + | chr1.3:1003419-1003438 | MS.gene64225:CDS | 30.0% | |
| ! | AATTCTAGAAGCAAAATCCT+TGG | - | chr1.3:1006258-1006277 | None:intergenic | 30.0% |
| ! | AATTGGTCTATTGCTAAATC+TGG | + | chr1.3:1003970-1003989 | MS.gene64225:intron | 30.0% |
| ! | ATTCTAGAAGCAAAATCCTT+GGG | - | chr1.3:1006257-1006276 | None:intergenic | 30.0% |
| ! | CCTTACTGATAAAGACATTT+TGG | + | chr1.3:1002546-1002565 | MS.gene64225:CDS | 30.0% |
| ! | GAGGATTTGGTAAAGAATTT+GGG | + | chr1.3:1003018-1003037 | MS.gene64225:CDS | 30.0% |
| ! | GTAATAAGGATATTTTCCTC+AGG | + | chr1.3:1002068-1002087 | MS.gene64225:CDS | 30.0% |
| ! | GTTTTCACATAAGCTATAAG+TGG | - | chr1.3:1002859-1002878 | None:intergenic | 30.0% |
| ! | TACATATCTAGAATGAAAGC+TGG | + | chr1.3:1005461-1005480 | MS.gene64225:CDS | 30.0% |
| ! | TTAACAATGTAGCTGATTCT+TGG | + | chr1.3:1005388-1005407 | MS.gene64225:intron | 30.0% |
| ! | TTCTAAAGACAAGGAACTAA+AGG | + | chr1.3:1005790-1005809 | MS.gene64225:CDS | 30.0% |
| !! | ACAAATGTTCTTTTTGGCAT+TGG | + | chr1.3:1004851-1004870 | MS.gene64225:intron | 30.0% |
| !! | CAAATGTTCTTTTTGGCATT+GGG | + | chr1.3:1004852-1004871 | MS.gene64225:intron | 30.0% |
| !! | CTTGAAATTGCTTTTCTGAT+TGG | + | chr1.3:1003298-1003317 | MS.gene64225:intron | 30.0% |
| !! | GTTAATTAGTTTGTCTCTGT+AGG | + | chr1.3:1002649-1002668 | MS.gene64225:intron | 30.0% |
| !! | TTGGTGTGAAGGATTTTAAT+TGG | + | chr1.3:1003116-1003135 | MS.gene64225:intron | 30.0% |
| !!! | GTACGTTTTGAGTTTTGAAT+CGG | + | chr1.3:1002158-1002177 | MS.gene64225:intron | 30.0% |
| !!! | GTTCTTTATTTTTCACTGCA+TGG | + | chr1.3:1003610-1003629 | MS.gene64225:intron | 30.0% |
| !!! | TAATGGGTTTATTTTTGGAC+TGG | + | chr1.3:1002719-1002738 | MS.gene64225:intron | 30.0% |
| AACTTCCCTATCTATATCTG+GGG | + | chr1.3:1004047-1004066 | MS.gene64225:CDS | 35.0% | |
| AAGCTTACGGATCATATCAA+GGG | - | chr1.3:1004983-1005002 | None:intergenic | 35.0% | |
| AAGTTCTATATTGTAGGCAC+TGG | + | chr1.3:1002504-1002523 | MS.gene64225:intron | 35.0% | |
| AGTGGTGATCTCAATCTAAT+TGG | + | chr1.3:1003180-1003199 | MS.gene64225:CDS | 35.0% | |
| AGTTTCAAGCTGAAGTTTCA+AGG | + | chr1.3:1002014-1002033 | MS.gene64225:CDS | 35.0% | |
| ATACTTGATGCAATACCTGA+TGG | + | chr1.3:1005709-1005728 | MS.gene64225:CDS | 35.0% | |
| ATCCTATCTATTAGAGACAG+AGG | + | chr1.3:1002979-1002998 | MS.gene64225:CDS | 35.0% | |
| CATTTCCAAAATCAATAGGC+TGG | - | chr1.3:1003354-1003373 | None:intergenic | 35.0% | |
| CCATAAGAGTTTACCTTCTA+AGG | - | chr1.3:1003805-1003824 | None:intergenic | 35.0% | |
| CCTTAGAAGGTAAACTCTTA+TGG | + | chr1.3:1003802-1003821 | MS.gene64225:intron | 35.0% | |
| CTCAATCTAATTGGGCAATT+TGG | + | chr1.3:1003189-1003208 | MS.gene64225:CDS | 35.0% | |
| GCATCAAGTATTCATCAACT+GGG | - | chr1.3:1005700-1005719 | None:intergenic | 35.0% | |
| GGAACTCTTAAATGATGTGA+AGG | + | chr1.3:1004368-1004387 | MS.gene64225:CDS | 35.0% | |
| GGGTATCACATAAATAGTGA+TGG | - | chr1.3:1004474-1004493 | None:intergenic | 35.0% | |
| GTAGTGGTGACATCAAAATT+TGG | + | chr1.3:1005911-1005930 | MS.gene64225:CDS | 35.0% | |
| GTGGTGATCTCAATCTAATT+GGG | + | chr1.3:1003181-1003200 | MS.gene64225:CDS | 35.0% | |
| TACCTCTGTCTCTAATAGAT+AGG | - | chr1.3:1002984-1003003 | None:intergenic | 35.0% | |
| TAGTGATGGCAATATTACCT+TGG | - | chr1.3:1004460-1004479 | None:intergenic | 35.0% | |
| TCCACTGACAAAGAAAAGAA+AGG | + | chr1.3:1005024-1005043 | MS.gene64225:CDS | 35.0% | |
| TCTAACATACAACTTCAGGT+TGG | - | chr1.3:1004705-1004724 | None:intergenic | 35.0% | |
| TGATAAACGATTTCTGTTGG+TGG | - | chr1.3:1005288-1005307 | None:intergenic | 35.0% | |
| TGATAAGGACCAAAGAATGA+TGG | + | chr1.3:1002680-1002699 | MS.gene64225:intron | 35.0% | |
| TGCATCAAGTATTCATCAAC+TGG | - | chr1.3:1005701-1005720 | None:intergenic | 35.0% | |
| TGCGGTGACAAAAATTGAAT+AGG | + | chr1.3:1002195-1002214 | MS.gene64225:intron | 35.0% | |
| TGGTGACATCAAAATTTGGT+TGG | + | chr1.3:1005915-1005934 | MS.gene64225:CDS | 35.0% | |
| TGTCTTTATCAGTAAGGGAT+AGG | - | chr1.3:1002543-1002562 | None:intergenic | 35.0% | |
| TTGGAAATGATCTGACTTTC+AGG | + | chr1.3:1003365-1003384 | MS.gene64225:intron | 35.0% | |
| TTTCTTGTTGAATGATCCCA+AGG | + | chr1.3:1006238-1006257 | MS.gene64225:CDS | 35.0% | |
| ! | ACCTTTCTTTTCTTTGTCAG+TGG | - | chr1.3:1005028-1005047 | None:intergenic | 35.0% |
| ! | ATAGCAAAATCTGGAACTTC+AGG | + | chr1.3:1003045-1003064 | MS.gene64225:CDS | 35.0% |
| ! | ATCGACATTGTCATTTGCAA+GGG | - | chr1.3:1005852-1005871 | None:intergenic | 35.0% |
| ! | ATCTGACTTTCAGGTATGTA+TGG | + | chr1.3:1003374-1003393 | MS.gene64225:intron | 35.0% |
| ! | ATTTTCCAGTTGTTCTTTGC+TGG | - | chr1.3:1005516-1005535 | None:intergenic | 35.0% |
| ! | CAAATTTAGAACGTACCTCA+GGG | - | chr1.3:1006081-1006100 | None:intergenic | 35.0% |
| ! | CTTTTCTGATTGGTATGTTG+TGG | + | chr1.3:1003308-1003327 | MS.gene64225:intron | 35.0% |
| ! | GGAGGATTTGGTAAAGAATT+TGG | + | chr1.3:1003017-1003036 | MS.gene64225:CDS | 35.0% |
| ! | GTGGTTTTCATAAGCTAACA+TGG | - | chr1.3:1002840-1002859 | None:intergenic | 35.0% |
| ! | TCAAATTTAGAACGTACCTC+AGG | - | chr1.3:1006082-1006101 | None:intergenic | 35.0% |
| ! | TCTATTAGAGACAGAGGTAT+TGG | + | chr1.3:1002985-1003004 | MS.gene64225:CDS | 35.0% |
| ! | TCTGACTTTCAGGTATGTAT+GGG | + | chr1.3:1003375-1003394 | MS.gene64225:intron | 35.0% |
| ! | TCTGCCATCTTTTAAACTTC+AGG | - | chr1.3:1003889-1003908 | None:intergenic | 35.0% |
| ! | TGAAGTTCCAGATTTTGCTA+TGG | - | chr1.3:1003046-1003065 | None:intergenic | 35.0% |
| ! | TGGTATGTTGTGGATGTTTT+TGG | + | chr1.3:1003318-1003337 | MS.gene64225:intron | 35.0% |
| ! | TTCAACATAGTTGGGCTTTT+TGG | + | chr1.3:1006131-1006150 | MS.gene64225:intron | 35.0% |
| !! | ACTCAATTGGCTTACTTTTC+AGG | + | chr1.3:1006157-1006176 | MS.gene64225:intron | 35.0% |
| !! | CTTCTGTTTTTCACAGGAAT+TGG | + | chr1.3:1004001-1004020 | MS.gene64225:intron | 35.0% |
| !! | GATAAAGACATTTTGGGTGA+AGG | + | chr1.3:1002553-1002572 | MS.gene64225:CDS | 35.0% |
| !!! | GGCTTTTTGGTTTACTCAAT+TGG | + | chr1.3:1006144-1006163 | MS.gene64225:intron | 35.0% |
| !!! | TCCTTCACTGTCTTTGTTTT+AGG | - | chr1.3:1004333-1004352 | None:intergenic | 35.0% |
| !!! | TTATGCCAGCCTATTGATTT+TGG | + | chr1.3:1003346-1003365 | MS.gene64225:intron | 35.0% |
| AAAAAGCAAGCATACATGCG+CGG | + | chr1.3:1005986-1006005 | MS.gene64225:CDS | 40.0% | |
| AAAGTCAGTGAAGGGAATTC+AGG | - | chr1.3:1005138-1005157 | None:intergenic | 40.0% | |
| AAATTTCAAGCGAATGCGGA+AGG | + | chr1.3:1001751-1001770 | MS.gene64225:CDS | 40.0% | |
| AAGAGAGAGAAGAAGAAGAG+TGG | - | chr1.3:1001514-1001533 | None:intergenic | 40.0% | |
| ACAAACCTGGATTTCAAGCT+TGG | - | chr1.3:1002587-1002606 | None:intergenic | 40.0% | |
| AGAAGCGAAAAGTCAGTGAA+GGG | - | chr1.3:1005146-1005165 | None:intergenic | 40.0% | |
| AGCTGAAGTTTCAAGGCTTA+TGG | + | chr1.3:1002021-1002040 | MS.gene64225:CDS | 40.0% | |
| AGGTATGGTGTAATGACTGT+TGG | + | chr1.3:1005044-1005063 | MS.gene64225:intron | 40.0% | |
| ATATTACCTTGGCAAGAGAG+TGG | - | chr1.3:1004449-1004468 | None:intergenic | 40.0% | |
| ATGTCAAGGATGAGTTGTAG+AGG | + | chr1.3:1006420-1006439 | MS.gene64225:CDS | 40.0% | |
| ATTTACAGCACCAAGTCTGA+GGG | + | chr1.3:1005416-1005435 | MS.gene64225:intron | 40.0% | |
| ATTTGGTTGGAGTGCAAACA+TGG | + | chr1.3:1005928-1005947 | MS.gene64225:CDS | 40.0% | |
| CAAGCTTACGGATCATATCA+AGG | - | chr1.3:1004984-1005003 | None:intergenic | 40.0% | |
| CCAAAGGTGGAAGAAAAACT+CGG | + | chr1.3:1001799-1001818 | MS.gene64225:CDS | 40.0% | |
| CCACTTAGTTAGATCCTTGA+AGG | - | chr1.3:1005819-1005838 | None:intergenic | 40.0% | |
| CCTCTTGACAACATCTGAAT+CGG | - | chr1.3:1001848-1001867 | None:intergenic | 40.0% | |
| CCTTCAAGGATCTAACTAAG+TGG | + | chr1.3:1005816-1005835 | MS.gene64225:CDS | 40.0% | |
| CGCACATTTCATTTCAATGG+TGG | + | chr1.3:1001690-1001709 | MS.gene64225:intron | 40.0% | |
| CGCTCGCTTACATTTGAAAA+GGG | - | chr1.3:1005111-1005130 | None:intergenic | 40.0% | |
| CTCGTCTAACATACAACTTC+AGG | - | chr1.3:1004709-1004728 | None:intergenic | 40.0% | |
| CTCTTAGCTGAAATGTTTGC+CGG | + | chr1.3:1003086-1003105 | MS.gene64225:intron | 40.0% | |
| GAAGTTCCAAAATGTGTCCA+AGG | + | chr1.3:1005745-1005764 | MS.gene64225:CDS | 40.0% | |
| GATACATGGAATGAACCACT+AGG | + | chr1.3:1003433-1003452 | MS.gene64225:CDS | 40.0% | |
| GCCTAAAACAAAGACAGTGA+AGG | + | chr1.3:1004329-1004348 | MS.gene64225:CDS | 40.0% | |
| GCGATGACAAACCTTTATCA+TGG | + | chr1.3:1004576-1004595 | MS.gene64225:CDS | 40.0% | |
| GGAACTAAAGGAATCCTTCA+AGG | + | chr1.3:1005802-1005821 | MS.gene64225:CDS | 40.0% | |
| GGTATGGTGTAATGACTGTT+GGG | + | chr1.3:1005045-1005064 | MS.gene64225:intron | 40.0% | |
| GTAAAGTGGCTCCATGATAA+AGG | - | chr1.3:1004590-1004609 | None:intergenic | 40.0% | |
| GTTGAGAAAATGCAGACAAG+TGG | + | chr1.3:1003162-1003181 | MS.gene64225:CDS | 40.0% | |
| TAGAAGCGAAAAGTCAGTGA+AGG | - | chr1.3:1005147-1005166 | None:intergenic | 40.0% | |
| TATATGGCTGAGGAATCCAA+AGG | + | chr1.3:1004392-1004411 | MS.gene64225:CDS | 40.0% | |
| TATTTACAGCACCAAGTCTG+AGG | + | chr1.3:1005415-1005434 | MS.gene64225:intron | 40.0% | |
| TCAAGGATCTAACTAAGTGG+TGG | + | chr1.3:1005819-1005838 | MS.gene64225:CDS | 40.0% | |
| TCATCTTCACTTTCCTCCTT+GGG | - | chr1.3:1004276-1004295 | None:intergenic | 40.0% | |
| TCCAAACTCATTCCAGAACT+TGG | - | chr1.3:1005234-1005253 | None:intergenic | 40.0% | |
| TCTCTTCTCATCAACATCAG+AGG | - | chr1.3:1005201-1005220 | None:intergenic | 40.0% | |
| TGAAGTAGTAGATCCACCAA+AGG | + | chr1.3:1001783-1001802 | MS.gene64225:CDS | 40.0% | |
| TGCTTCCCCAGATATAGATA+GGG | - | chr1.3:1004055-1004074 | None:intergenic | 40.0% | |
| TGGAGTATGCATACCTTAGA+AGG | + | chr1.3:1003789-1003808 | MS.gene64225:intron | 40.0% | |
| TGGTATGACAAAGGAGGATT+TGG | + | chr1.3:1003005-1003024 | MS.gene64225:CDS | 40.0% | |
| TGTCAATTTACCCTCAGACT+TGG | - | chr1.3:1005429-1005448 | None:intergenic | 40.0% | |
| TGTGAAGATATCCAACCGAT+TGG | + | chr1.3:1005874-1005893 | MS.gene64225:CDS | 40.0% | |
| TGTGTGTGAATGAAGGGAAT+CGG | + | chr1.3:1001946-1001965 | MS.gene64225:intron | 40.0% | |
| TTCATCTTCACTTTCCTCCT+TGG | - | chr1.3:1004277-1004296 | None:intergenic | 40.0% | |
| TTCCAAAATGTGTCCAAGGA+GGG | + | chr1.3:1005749-1005768 | MS.gene64225:CDS | 40.0% | |
| TTGCTTCCCCAGATATAGAT+AGG | - | chr1.3:1004056-1004075 | None:intergenic | 40.0% | |
| TTGGGTACCATAGCAAAATC+TGG | + | chr1.3:1003036-1003055 | MS.gene64225:CDS | 40.0% | |
| TTTGATGTCACCACTACACA+AGG | - | chr1.3:1005908-1005927 | None:intergenic | 40.0% | |
| ! | AAATGACGATGGTGATGTCA+AGG | + | chr1.3:1006406-1006425 | MS.gene64225:CDS | 40.0% |
| ! | AATGTTTGCCGGTTGTGATT+TGG | + | chr1.3:1003097-1003116 | MS.gene64225:intron | 40.0% |
| ! | AGTTTTTCTTCCACCTTTGG+TGG | - | chr1.3:1001799-1001818 | None:intergenic | 40.0% |
| ! | CATCGACATTGTCATTTGCA+AGG | - | chr1.3:1005853-1005872 | None:intergenic | 40.0% |
| ! | CATTTGAAATCAGTTCCCTG+AGG | - | chr1.3:1002087-1002106 | None:intergenic | 40.0% |
| ! | CCTTTTCAAATGTAAGCGAG+CGG | + | chr1.3:1005109-1005128 | MS.gene64225:intron | 40.0% |
| ! | CTAATTGGGCAATTTGGAGT+TGG | + | chr1.3:1003195-1003214 | MS.gene64225:CDS | 40.0% |
| ! | GCAAAGTGTCAGAATCAACA+AGG | - | chr1.3:1004885-1004904 | None:intergenic | 40.0% |
| ! | GTATGGGAATCTAAAGCTGA+TGG | + | chr1.3:1003391-1003410 | MS.gene64225:CDS | 40.0% |
| ! | TCTGATGTTGATGAGAAGAG+AGG | + | chr1.3:1005200-1005219 | MS.gene64225:CDS | 40.0% |
| ! | TGGTGGATCTACTACTTCAT+CGG | - | chr1.3:1001782-1001801 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCAGACGCTCA+AGG | - | chr1.3:1005547-1005566 | None:intergenic | 40.0% |
| !! | ACCAAGTTCTGGAATGAGTT+TGG | + | chr1.3:1005230-1005249 | MS.gene64225:CDS | 40.0% |
| !! | AGGTATTGGTATGACAAAGG+AGG | + | chr1.3:1002999-1003018 | MS.gene64225:CDS | 40.0% |
| !! | CACAAGGAGTGTTATCCAAT+CGG | - | chr1.3:1005892-1005911 | None:intergenic | 40.0% |
| !! | CAGAGGTATTGGTATGACAA+AGG | + | chr1.3:1002996-1003015 | MS.gene64225:CDS | 40.0% |
| !! | TCTTTTTGGCATTGGGAACA+GGG | + | chr1.3:1004859-1004878 | MS.gene64225:intron | 40.0% |
| !! | TTCTTTTTGGCATTGGGAAC+AGG | + | chr1.3:1004858-1004877 | MS.gene64225:intron | 40.0% |
| ACCCTATCATCAAGGAACTC+CGG | + | chr1.3:1006038-1006057 | MS.gene64225:CDS | 45.0% | |
| AGTAGTAGATCCACCAAAGG+TGG | + | chr1.3:1001786-1001805 | MS.gene64225:CDS | 45.0% | |
| ATGTGAAGGCTATATGGCTG+AGG | + | chr1.3:1004382-1004401 | MS.gene64225:CDS | 45.0% | |
| ATTCTACCACTCTCTTGCCA+AGG | + | chr1.3:1004440-1004459 | MS.gene64225:CDS | 45.0% | |
| CATCACCTTCAGCAGTAAAG+TGG | - | chr1.3:1004604-1004623 | None:intergenic | 45.0% | |
| CATCTTCACTTTCCTCCTTG+GGG | - | chr1.3:1004275-1004294 | None:intergenic | 45.0% | |
| CCGATTCAGATGTTGTCAAG+AGG | + | chr1.3:1001845-1001864 | MS.gene64225:CDS | 45.0% | |
| CCGCTCGCTTACATTTGAAA+AGG | - | chr1.3:1005112-1005131 | None:intergenic | 45.0% | |
| CCTTCACACCAAATCACAAC+CGG | - | chr1.3:1003108-1003127 | None:intergenic | 45.0% | |
| CTATATCTGGGGAAGCAAAG+AGG | + | chr1.3:1004058-1004077 | MS.gene64225:CDS | 45.0% | |
| CTTCTTCTTCTCGCAGATCA+AGG | + | chr1.3:1001534-1001553 | MS.gene64225:CDS | 45.0% | |
| GAAGGAAACGACTTACGAGT+GGG | + | chr1.3:1004347-1004366 | MS.gene64225:CDS | 45.0% | |
| GAATCCAAAGGAGGTTACAG+AGG | + | chr1.3:1004404-1004423 | MS.gene64225:CDS | 45.0% | |
| GAATCGGTTGAAAGTCCATG+AGG | - | chr1.3:1001832-1001851 | None:intergenic | 45.0% | |
| GAGAGAAGAAGAAGAGTGGA+AGG | - | chr1.3:1001510-1001529 | None:intergenic | 45.0% | |
| GAGAGTAGTTAAGAACCCTG+AGG | + | chr1.3:1006063-1006082 | MS.gene64225:CDS | 45.0% | |
| GAGGTCAATACACCAAGTTC+TGG | + | chr1.3:1005219-1005238 | MS.gene64225:CDS | 45.0% | |
| GCTGATGAGGTAAATGACGA+TGG | + | chr1.3:1006395-1006414 | MS.gene64225:CDS | 45.0% | |
| GGAAGATGAGACTGAAGTTG+AGG | + | chr1.3:1006331-1006350 | MS.gene64225:CDS | 45.0% | |
| GGATAACACTCCTTGTGTAG+TGG | + | chr1.3:1005895-1005914 | MS.gene64225:CDS | 45.0% | |
| GGTTCTTAACTACTCTCTCC+CGG | - | chr1.3:1006060-1006079 | None:intergenic | 45.0% | |
| GTTCCAAAATGTGTCCAAGG+AGG | + | chr1.3:1005748-1005767 | MS.gene64225:CDS | 45.0% | |
| TAACTCTCGTACAAGTCCTG+AGG | - | chr1.3:1004665-1004684 | None:intergenic | 45.0% | |
| TCATCAAGCTCCAAGAGAAG+TGG | - | chr1.3:1004517-1004536 | None:intergenic | 45.0% | |
| TCCTAGACACCCTATCATCA+AGG | + | chr1.3:1006030-1006049 | MS.gene64225:CDS | 45.0% | |
| TCTTCCTCTGTAACCTCCTT+TGG | - | chr1.3:1004411-1004430 | None:intergenic | 45.0% | |
| TGAAGGAAACGACTTACGAG+TGG | + | chr1.3:1004346-1004365 | MS.gene64225:CDS | 45.0% | |
| TGCTTCAAACGAAGCTGATG+AGG | + | chr1.3:1006382-1006401 | MS.gene64225:CDS | 45.0% | |
| TGGAACCAGCAAAGAACAAC+TGG | + | chr1.3:1005508-1005527 | MS.gene64225:CDS | 45.0% | |
| TTCTTCAGACGCTCAAGGAA+TGG | - | chr1.3:1005542-1005561 | None:intergenic | 45.0% | |
| ! | AGTAGGGGGTAGTGTTTCTA+TGG | + | chr1.3:1003769-1003788 | MS.gene64225:intron | 45.0% |
| ! | ATGTTTGGTTCCACTTCGAG+AGG | - | chr1.3:1002421-1002440 | None:intergenic | 45.0% |
| ! | CACTTTCGAAAAGTGCAGTC+TGG | - | chr1.3:1006217-1006236 | None:intergenic | 45.0% |
| ! | CAGACTGCACTTTTCGAAAG+TGG | + | chr1.3:1006215-1006234 | MS.gene64225:CDS | 45.0% |
| ! | CCGAGTTTTTCTTCCACCTT+TGG | - | chr1.3:1001802-1001821 | None:intergenic | 45.0% |
| ! | CGGGAAGGATTCTAAAGACA+AGG | + | chr1.3:1005781-1005800 | MS.gene64225:CDS | 45.0% |
| ! | GGATGAGAGTGTGAAGCAAA+CGG | + | chr1.3:1006178-1006197 | MS.gene64225:intron | 45.0% |
| ! | GTGCTTTAGGTGGCACATAA+AGG | - | chr1.3:1004643-1004662 | None:intergenic | 45.0% |
| ! | GTTGGGGATTTGTGTTTTGC+AGG | + | chr1.3:1004547-1004566 | MS.gene64225:intron | 45.0% |
| ! | TACAAGTCCTGAGGTGCTTT+AGG | - | chr1.3:1004656-1004675 | None:intergenic | 45.0% |
| ! | TCATCAGCTTCGTTTGAAGC+AGG | - | chr1.3:1006383-1006402 | None:intergenic | 45.0% |
| ! | TCCTTGATGATAGGGTGTCT+AGG | - | chr1.3:1006034-1006053 | None:intergenic | 45.0% |
| !! | AAGCAAAGAGGTTGATGTGG+AGG | + | chr1.3:1004070-1004089 | MS.gene64225:CDS | 45.0% |
| !! | AGGAGTGTTATCCAATCGGT+TGG | - | chr1.3:1005888-1005907 | None:intergenic | 45.0% |
| !! | TCGGTGTGTGTTTAGTTCTG+CGG | + | chr1.3:1002177-1002196 | MS.gene64225:intron | 45.0% |
| !! | TGTAGGCACTGGACAAGATT+AGG | + | chr1.3:1002515-1002534 | MS.gene64225:intron | 45.0% |
| !!! | AATTTTGGCTCCTCTCGAAG+TGG | + | chr1.3:1002408-1002427 | MS.gene64225:intron | 45.0% |
| ACTTCTCCGCATTACTGCGA+AGG | - | chr1.3:1001991-1002010 | None:intergenic | 50.0% | |
| AGACTCGTCGTCTTCATCAG+CGG | - | chr1.3:1004099-1004118 | None:intergenic | 50.0% | |
| ATACTCTTCCACGTACTCGC+TGG | - | chr1.3:1003497-1003516 | None:intergenic | 50.0% | |
| ATCTCTGTTCCACGTCCTAG+TGG | - | chr1.3:1003451-1003470 | None:intergenic | 50.0% | |
| ATGGCTGAGGAATCCAAAGG+AGG | + | chr1.3:1004395-1004414 | MS.gene64225:CDS | 50.0% | |
| CAACGCCAAGCTTGAAATCC+AGG | + | chr1.3:1002579-1002598 | MS.gene64225:CDS | 50.0% | |
| CAGTCCTGATGCAACAGTTG+AGG | + | chr1.3:1006307-1006326 | MS.gene64225:CDS | 50.0% | |
| CCCTATCATCAAGGAACTCC+GGG | + | chr1.3:1006039-1006058 | MS.gene64225:CDS | 50.0% | |
| CTTCTCCGCATTACTGCGAA+GGG | - | chr1.3:1001990-1002009 | None:intergenic | 50.0% | |
| GAGATCCCTTCGCAGTAATG+CGG | + | chr1.3:1001982-1002001 | MS.gene64225:CDS | 50.0% | |
| TCAATCAGCTGAAAGCCCCA+AGG | + | chr1.3:1004257-1004276 | MS.gene64225:intron | 50.0% | |
| TCCTCCTCAACTGTTGCATC+AGG | - | chr1.3:1006314-1006333 | None:intergenic | 50.0% | |
| TCCTGATGCAACAGTTGAGG+AGG | + | chr1.3:1006310-1006329 | MS.gene64225:CDS | 50.0% | |
| TGAAGACGACGAGTCTTCTG+AGG | + | chr1.3:1004103-1004122 | MS.gene64225:CDS | 50.0% | |
| TGGAATGAACCACTAGGACG+TGG | + | chr1.3:1003439-1003458 | MS.gene64225:CDS | 50.0% | |
| ! | AAGTCCTGAGGTGCTTTAGG+TGG | - | chr1.3:1004653-1004672 | None:intergenic | 50.0% |
| ! | CCCGGAGTTCCTTGATGATA+GGG | - | chr1.3:1006042-1006061 | None:intergenic | 50.0% |
| ! | CTTTGTCAGTGGACTCGTCA+GGG | - | chr1.3:1005017-1005036 | None:intergenic | 50.0% |
| ! | GACCCTCCTTGGACACATTT+TGG | - | chr1.3:1005754-1005773 | None:intergenic | 50.0% |
| ! | TCCAAGGAGGGTCTGAAACT+CGG | + | chr1.3:1005761-1005780 | MS.gene64225:CDS | 50.0% |
| ! | TCCCGGAGTTCCTTGATGAT+AGG | - | chr1.3:1006043-1006062 | None:intergenic | 50.0% |
| ! | TCTTTGTCAGTGGACTCGTC+AGG | - | chr1.3:1005018-1005037 | None:intergenic | 50.0% |
| ! | TGGAGCCACTTTACTGCTGA+AGG | + | chr1.3:1004596-1004615 | MS.gene64225:CDS | 50.0% |
| !! | AAACTCGGTGCTGTTCCTCA+TGG | + | chr1.3:1001814-1001833 | MS.gene64225:CDS | 50.0% |
| !! | CCGGTTGTGATTTGGTGTGA+AGG | + | chr1.3:1003105-1003124 | MS.gene64225:intron | 50.0% |
| !! | GGGAAGCAAAGAGGTTGATG+TGG | + | chr1.3:1004067-1004086 | MS.gene64225:CDS | 50.0% |
| AAGCATACATGCGCGGCAAG+AGG | + | chr1.3:1005993-1006012 | MS.gene64225:CDS | 55.0% | |
| AGCATACATGCGCGGCAAGA+GGG | + | chr1.3:1005994-1006013 | MS.gene64225:CDS | 55.0% | |
| ATCAGCTGAAAGCCCCAAGG+AGG | + | chr1.3:1004260-1004279 | MS.gene64225:intron | 55.0% | |
| GACTCGTCGTCTTCATCAGC+GGG | - | chr1.3:1004098-1004117 | None:intergenic | 55.0% | |
| GATCCGTAAGCTTGCCGAAG+AGG | + | chr1.3:1004990-1005009 | MS.gene64225:CDS | 55.0% | |
| GGTCCTCTTCGGCAAGCTTA+CGG | - | chr1.3:1004996-1005015 | None:intergenic | 55.0% | |
| ! | ACTCGCTGGCCTCTTCTTTG+AGG | - | chr1.3:1003483-1003502 | None:intergenic | 55.0% |
| ! | CCAAGGAGGGTCTGAAACTC+GGG | + | chr1.3:1005762-1005781 | MS.gene64225:CDS | 55.0% |
| ! | CGACGAGTCTTCTGAGGAAG+AGG | + | chr1.3:1004109-1004128 | MS.gene64225:CDS | 55.0% |
| ! | TGTGCCACCTAAAGCACCTC+AGG | + | chr1.3:1004646-1004665 | MS.gene64225:CDS | 55.0% |
| AGAAGAGGCCAGCGAGTACG+TGG | + | chr1.3:1003486-1003505 | MS.gene64225:CDS | 60.0% | |
| CCCGAGTTTCAGACCCTCCT+TGG | - | chr1.3:1005765-1005784 | None:intergenic | 60.0% | |
| GGACTCGTCAGGGTCCTCTT+CGG | - | chr1.3:1005007-1005026 | None:intergenic | 60.0% | |
| ! | GGAGGGTCTGAAACTCGGGA+AGG | + | chr1.3:1005766-1005785 | MS.gene64225:CDS | 60.0% |
| CTGGCGTGCGTGCGTGCATA+AGG | + | chr1.3:1003673-1003692 | MS.gene64225:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 1001489 | 1006439 | 1001489 | ID=MS.gene64225 |
| chr1.3 | mRNA | 1001489 | 1006439 | 1001489 | ID=MS.gene64225.t1;Parent=MS.gene64225 |
| chr1.3 | exon | 1001489 | 1001555 | 1001489 | ID=MS.gene64225.t1.exon1;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1001489 | 1001555 | 1001489 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1001746 | 1001866 | 1001746 | ID=MS.gene64225.t1.exon2;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1001746 | 1001866 | 1001746 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1001961 | 1002114 | 1001961 | ID=MS.gene64225.t1.exon3;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1001961 | 1002114 | 1001961 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1002520 | 1002600 | 1002520 | ID=MS.gene64225.t1.exon4;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1002520 | 1002600 | 1002520 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1002955 | 1003066 | 1002955 | ID=MS.gene64225.t1.exon5;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1002955 | 1003066 | 1002955 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1003157 | 1003283 | 1003157 | ID=MS.gene64225.t1.exon6;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1003157 | 1003283 | 1003157 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1003387 | 1003525 | 1003387 | ID=MS.gene64225.t1.exon7;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1003387 | 1003525 | 1003387 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1004017 | 1004137 | 1004017 | ID=MS.gene64225.t1.exon8;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1004017 | 1004137 | 1004017 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1004265 | 1004461 | 1004265 | ID=MS.gene64225.t1.exon9;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1004265 | 1004461 | 1004265 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1004569 | 1004784 | 1004569 | ID=MS.gene64225.t1.exon10;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1004569 | 1004784 | 1004569 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1004880 | 1005045 | 1004880 | ID=MS.gene64225.t1.exon11;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1004880 | 1005045 | 1004880 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1005189 | 1005327 | 1005189 | ID=MS.gene64225.t1.exon12;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1005189 | 1005327 | 1005189 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1005424 | 1005574 | 1005424 | ID=MS.gene64225.t1.exon13;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1005424 | 1005574 | 1005424 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1005680 | 1006084 | 1005680 | ID=MS.gene64225.t1.exon14;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1005680 | 1006084 | 1005680 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| chr1.3 | exon | 1006179 | 1006439 | 1006179 | ID=MS.gene64225.t1.exon15;Parent=MS.gene64225.t1 |
| chr1.3 | CDS | 1006179 | 1006439 | 1006179 | ID=cds.MS.gene64225.t1;Parent=MS.gene64225.t1 |
| Gene Sequence |
| Protein sequence |
