Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020834.t1 | XP_004491530.1 | 97.6 | 699 | 17 | 0 | 1 | 699 | 1 | 699 | 0.00E+00 | 1244.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020834.t1 | P36181 | 93.0 | 699 | 49 | 0 | 1 | 699 | 1 | 699 | 0.0e+00 | 1198.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020834.t1 | A0A1S2XPL0 | 97.6 | 699 | 17 | 0 | 1 | 699 | 1 | 699 | 0.0e+00 | 1244.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020834 | MS.gene62123 | PPI |
| MS.gene020834 | MS.gene38262 | PPI |
| MS.gene020834 | MS.gene64023 | PPI |
| MS.gene020834 | MS.gene061126 | PPI |
| MS.gene020834 | MS.gene38261 | PPI |
| MS.gene24136 | MS.gene020834 | PPI |
| MS.gene37988 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene49154 | PPI |
| MS.gene020834 | MS.gene006231 | PPI |
| MS.gene37989 | MS.gene020834 | PPI |
| MS.gene64024 | MS.gene020834 | PPI |
| MS.gene029690 | MS.gene020834 | PPI |
| MS.gene38210 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene30654 | PPI |
| MS.gene020834 | MS.gene38049 | PPI |
| MS.gene020834 | MS.gene75389 | PPI |
| MS.gene020833 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene040499 | PPI |
| MS.gene020834 | MS.gene27084 | PPI |
| MS.gene81285 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene64225 | PPI |
| MS.gene020834 | MS.gene62607 | PPI |
| MS.gene81288 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene020886 | PPI |
| MS.gene81227 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene75388 | PPI |
| MS.gene58998 | MS.gene020834 | PPI |
| MS.gene38262 | MS.gene020834 | PPI |
| MS.gene020834 | MS.gene60613 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020834.t1 | MTR_5g096430 | 99.857 | 699 | 1 | 0 | 1 | 699 | 1 | 699 | 0.0 | 1419 |
| MS.gene020834.t1 | MTR_5g096460 | 99.857 | 699 | 1 | 0 | 1 | 699 | 1 | 699 | 0.0 | 1419 |
| MS.gene020834.t1 | MTR_6g452990 | 88.160 | 701 | 79 | 3 | 1 | 699 | 1 | 699 | 0.0 | 1186 |
| MS.gene020834.t1 | MTR_1g099840 | 84.692 | 699 | 92 | 2 | 1 | 699 | 6 | 689 | 0.0 | 1146 |
| MS.gene020834.t1 | MTR_1g025430 | 48.867 | 706 | 320 | 8 | 5 | 673 | 78 | 779 | 0.0 | 642 |
| MS.gene020834.t1 | MTR_5g097320 | 45.562 | 676 | 345 | 10 | 5 | 667 | 90 | 755 | 0.0 | 577 |
| MS.gene020834.t1 | MTR_0009s0390 | 45.634 | 710 | 354 | 13 | 5 | 698 | 82 | 775 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020834.t1 | AT5G56000 | 90.714 | 700 | 63 | 2 | 1 | 699 | 1 | 699 | 0.0 | 1205 |
| MS.gene020834.t1 | AT5G56030 | 92.286 | 700 | 52 | 2 | 1 | 699 | 1 | 699 | 0.0 | 1196 |
| MS.gene020834.t1 | AT5G56010 | 92.000 | 700 | 54 | 2 | 1 | 699 | 1 | 699 | 0.0 | 1194 |
| MS.gene020834.t1 | AT5G56030 | 88.615 | 729 | 52 | 3 | 1 | 699 | 1 | 728 | 0.0 | 1181 |
| MS.gene020834.t1 | AT5G52640 | 85.185 | 702 | 99 | 5 | 1 | 699 | 1 | 700 | 0.0 | 1148 |
| MS.gene020834.t1 | AT4G24190 | 50.356 | 703 | 310 | 8 | 5 | 672 | 77 | 775 | 0.0 | 643 |
| MS.gene020834.t1 | AT4G24190 | 50.356 | 703 | 310 | 8 | 5 | 672 | 77 | 775 | 0.0 | 642 |
| MS.gene020834.t1 | AT2G04030 | 47.485 | 676 | 329 | 11 | 5 | 668 | 77 | 738 | 0.0 | 597 |
| MS.gene020834.t1 | AT3G07770 | 45.495 | 677 | 346 | 10 | 5 | 668 | 95 | 761 | 0.0 | 590 |
| MS.gene020834.t1 | AT3G07770 | 45.495 | 677 | 346 | 10 | 5 | 668 | 95 | 761 | 0.0 | 590 |
| MS.gene020834.t1 | AT3G07770 | 45.495 | 677 | 346 | 10 | 5 | 668 | 95 | 761 | 0.0 | 590 |
| MS.gene020834.t1 | AT2G04030 | 47.033 | 674 | 332 | 11 | 5 | 668 | 77 | 735 | 0.0 | 588 |
Find 175 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGGTCAGTTGGAGTTTA+AGG | 0.170053 | 5.4:-75595926 | MS.gene020834:CDS |
| GAGACTGCTCTTCTTACTTC+TGG | 0.243959 | 5.4:-75594917 | MS.gene020834:CDS |
| TTCTCAACCCAAAGAGAAAT+TGG | 0.256773 | 5.4:+75596219 | None:intergenic |
| TGAACAAGCAGAAGCCTATT+TGG | 0.260701 | 5.4:-75596050 | MS.gene020834:CDS |
| TTAGCTATCCAATTTCTCTT+TGG | 0.269210 | 5.4:-75596227 | MS.gene020834:CDS |
| CTTGATGAGCCCAACACTTT+TGG | 0.271765 | 5.4:-75594887 | MS.gene020834:CDS |
| TAGCTATCCAATTTCTCTTT+GGG | 0.282969 | 5.4:-75596226 | MS.gene020834:CDS |
| GATACCCAGCTTCAAGTTCT+TGG | 0.291494 | 5.4:+75595594 | None:intergenic |
| ACAAGAGACGTTCGCTTTCC+AGG | 0.298645 | 5.4:-75597677 | MS.gene020834:CDS |
| ACTCAAGTTGATCCTCCTTT+AGG | 0.313372 | 5.4:+75596301 | None:intergenic |
| TCCTCCATGATGGGATTCTC+AGG | 0.339757 | 5.4:+75595007 | None:intergenic |
| CAATGATTGGGAAGAGCATT+TGG | 0.340719 | 5.4:-75595968 | MS.gene020834:CDS |
| TGTTTAGTGACTGGTGAGTA+TGG | 0.358330 | 5.4:-75595127 | MS.gene020834:CDS |
| GACATACAGCTTGATGTTGT+TGG | 0.373069 | 5.4:+75595846 | None:intergenic |
| AAACGTTAGCTTACCAGCTT+TGG | 0.375649 | 5.4:+75596679 | None:intergenic |
| GTCTGGTACCAAGGAATTCA+TGG | 0.376590 | 5.4:-75596535 | MS.gene020834:CDS |
| GAGATCAAAAGGTGCTCTCT+TGG | 0.380844 | 5.4:+75595888 | None:intergenic |
| AATGACATTTACTACATTAC+CGG | 0.381181 | 5.4:-75595454 | MS.gene020834:CDS |
| AGTTCTTCCTGATGACCTTA+AGG | 0.384170 | 5.4:+75595695 | None:intergenic |
| ACAAGAGTCTCACCAATGAT+TGG | 0.384273 | 5.4:-75595981 | MS.gene020834:CDS |
| TGAGTATCTTAGCTTTGTTA+AGG | 0.384871 | 5.4:-75595782 | MS.gene020834:CDS |
| TCTGGCTTCCTCATCCAAAT+AGG | 0.390372 | 5.4:+75596036 | None:intergenic |
| ACATACAGCTTGATGTTGTT+GGG | 0.394439 | 5.4:+75595847 | None:intergenic |
| AAAGTGTTGTTGGTCTTGTC+AGG | 0.406501 | 5.4:+75596731 | None:intergenic |
| AATGATAGTCAAAGTGTTGT+TGG | 0.411318 | 5.4:+75596721 | None:intergenic |
| TCATCCTTTGTAATCTCCTC+TGG | 0.414109 | 5.4:+75596018 | None:intergenic |
| GAAGAAGGAAGAGGAGGGTA+AGG | 0.417477 | 5.4:-75596154 | MS.gene020834:CDS |
| ACTATCATTGATAGTGGCAT+TGG | 0.423433 | 5.4:-75596707 | MS.gene020834:CDS |
| GTGAGTATGATTGGACAGTT+TGG | 0.425748 | 5.4:-75596489 | MS.gene020834:CDS |
| CGAGGAAGAGAAGAAGGAAG+AGG | 0.429375 | 5.4:-75596163 | MS.gene020834:CDS |
| GGTCATGTCATCACCACTCT+TGG | 0.434025 | 5.4:+75595516 | None:intergenic |
| GGAAGAGGAGGGTAAGGTTG+AGG | 0.435286 | 5.4:-75596148 | MS.gene020834:CDS |
| CTTCTCTGTTGAGGGTCAGT+TGG | 0.437261 | 5.4:-75595935 | MS.gene020834:CDS |
| ACAAGATCCTTAAGGTCATC+AGG | 0.437555 | 5.4:-75595702 | MS.gene020834:CDS |
| GAGTATCTTAGCTTTGTTAA+GGG | 0.438963 | 5.4:-75595781 | MS.gene020834:CDS |
| CATGAAGGCACAAGCTTTGA+GGG | 0.445178 | 5.4:-75595080 | MS.gene020834:CDS |
| TTTGTGTCAAAGAGATCAAA+AGG | 0.446679 | 5.4:+75595877 | None:intergenic |
| GTTAAGCACTTCTCTGTTGA+GGG | 0.447502 | 5.4:-75595943 | MS.gene020834:CDS |
| CTAGTGTCTGCAACTAAAGA+AGG | 0.450314 | 5.4:-75595298 | MS.gene020834:CDS |
| ACTTTGACTATCATTGATAG+TGG | 0.450944 | 5.4:-75596713 | MS.gene020834:CDS |
| CCTTGAGAAGCTTAGGAAGA+AGG | 0.459680 | 5.4:-75595398 | MS.gene020834:CDS |
| CAAGAGTCTCACCAATGATT+GGG | 0.462392 | 5.4:-75595980 | MS.gene020834:CDS |
| CAAATGCTCTTCCCAATCAT+TGG | 0.463958 | 5.4:+75595969 | None:intergenic |
| TATAGCTTCCATGAATTCCT+TGG | 0.467031 | 5.4:+75596527 | None:intergenic |
| TGGTCAGCTCAAGGAATTTG+AGG | 0.468755 | 5.4:-75595329 | MS.gene020834:CDS |
| TGCTTACCTTGTTGCTGAGA+AGG | 0.468853 | 5.4:-75596451 | MS.gene020834:CDS |
| AGATCAAAAGGTGCTCTCTT+GGG | 0.469930 | 5.4:+75595889 | None:intergenic |
| TGTTAAGCACTTCTCTGTTG+AGG | 0.472630 | 5.4:-75595944 | MS.gene020834:CDS |
| TTCCTCAGCTCCTCCATGAT+GGG | 0.474148 | 5.4:+75594998 | None:intergenic |
| AGTAGACGAGGAGAAAGAAA+AGG | 0.477035 | 5.4:-75596124 | MS.gene020834:CDS |
| TTTCTCCAAGAACTTGAAGC+TGG | 0.477075 | 5.4:-75595599 | MS.gene020834:CDS |
| GGTGCTGATGTGAGTATGAT+TGG | 0.477447 | 5.4:-75596498 | MS.gene020834:CDS |
| TTGAGGGATAGCAGCATGGC+TGG | 0.477457 | 5.4:-75595064 | MS.gene020834:CDS |
| TCATGAAGGCACAAGCTTTG+AGG | 0.479345 | 5.4:-75595081 | MS.gene020834:CDS |
| AGTGAATGACCCACCAGCTT+GGG | 0.479426 | 5.4:+75596380 | None:intergenic |
| TGAGGACGAGGAAGAGAAGA+AGG | 0.480741 | 5.4:-75596169 | MS.gene020834:CDS |
| AGAATCAAGCTTGCTCTTGT+CGG | 0.482487 | 5.4:+75596781 | None:intergenic |
| TAGCTTTGTTAAGGGTATTG+TGG | 0.484688 | 5.4:-75595773 | MS.gene020834:CDS |
| CTTTGAAATTGCTGAGAACA+AGG | 0.486596 | 5.4:-75595647 | MS.gene020834:CDS |
| GGAAGAGAAGAAGGAAGAGG+AGG | 0.487208 | 5.4:-75596160 | MS.gene020834:CDS |
| CATGTCATCACCACTCTTGG+TGG | 0.488480 | 5.4:+75595519 | None:intergenic |
| ATTCTGTCCTTCCTTCATCC+TGG | 0.488551 | 5.4:+75595474 | None:intergenic |
| CTAAGCTTGCTGATTTGCTC+AGG | 0.489387 | 5.4:-75595549 | MS.gene020834:CDS |
| TCAACAGAACAAGATCCTTA+AGG | 0.489546 | 5.4:-75595710 | MS.gene020834:CDS |
| GGTGTCTAATGAATGGTCTT+TGG | 0.492991 | 5.4:-75596073 | MS.gene020834:CDS |
| ATGATTGGACAGTTTGGTGT+TGG | 0.493545 | 5.4:-75596483 | MS.gene020834:CDS |
| GGAACGCCGTCTGAAGGACT+TGG | 0.493605 | 5.4:-75596271 | MS.gene020834:CDS |
| AACAGCTTTCTTGCTTTCAC+CGG | 0.494202 | 5.4:+75595435 | None:intergenic |
| TAAAATAACTCTCATCCTAA+AGG | 0.494415 | 5.4:-75596316 | MS.gene020834:CDS |
| CTTCCTAAGCTTCTCAAGGA+AGG | 0.495109 | 5.4:+75595402 | None:intergenic |
| CAATCTTTGCAAGGTGATCA+AGG | 0.496155 | 5.4:-75595212 | MS.gene020834:CDS |
| GGCATTGGAATGACCAAAGC+TGG | 0.498686 | 5.4:-75596692 | MS.gene020834:intron |
| GGGTGACAAGGTTGAGAAAG+TGG | 0.499707 | 5.4:-75595182 | MS.gene020834:CDS |
| ATCTCTCTTGAAATGTTAAG+TGG | 0.500434 | 5.4:+75595736 | None:intergenic |
| TTCGTCATCATTGTGCTTGG+TGG | 0.500444 | 5.4:+75596419 | None:intergenic |
| CTAGGTACCATTGCTAGGTC+TGG | 0.502477 | 5.4:-75596552 | MS.gene020834:CDS |
| GAAGAGAAGAAGGAAGAGGA+GGG | 0.502813 | 5.4:-75596159 | MS.gene020834:CDS |
| GATACTACTGGTGAAGCTCT+TGG | 0.506627 | 5.4:-75596348 | MS.gene020834:CDS |
| TCTCCTTGCTGTTTAGTGAC+TGG | 0.506819 | 5.4:-75595136 | MS.gene020834:CDS |
| TTTCCTCAGCTCCTCCATGA+TGG | 0.507054 | 5.4:+75594997 | None:intergenic |
| CTTGAGAAGCTTAGGAAGAA+GGG | 0.508184 | 5.4:-75595397 | MS.gene020834:CDS |
| CAAGGTGATCAAGGAGGTGT+TGG | 0.509412 | 5.4:-75595203 | MS.gene020834:CDS |
| TTCCTAAGCTTCTCAAGGAA+GGG | 0.510661 | 5.4:+75595403 | None:intergenic |
| GTGGGTCATTCACTGTGACC+AGG | 0.512028 | 5.4:-75596371 | MS.gene020834:CDS |
| TCCTAAGCTTCTCAAGGAAG+GGG | 0.515007 | 5.4:+75595404 | None:intergenic |
| AGCTTCACCAGTAGTATCCC+TGG | 0.516220 | 5.4:+75596353 | None:intergenic |
| CTTCATGATCCTCTCCATGT+TGG | 0.521693 | 5.4:+75595096 | None:intergenic |
| TGCTGACATGCCACCATTGG+AGG | 0.530142 | 5.4:-75594801 | MS.gene020834:CDS |
| ATCCTGTTGCCAAAAGTGTT+GGG | 0.532827 | 5.4:+75594878 | None:intergenic |
| ATTCACAGGATGCTCAAGCT+TGG | 0.534491 | 5.4:-75594857 | MS.gene020834:CDS |
| TCAGCATCAGCTTCCTCCAA+TGG | 0.535356 | 5.4:+75594788 | None:intergenic |
| CATTGCTAGGTCTGGTACCA+AGG | 0.535688 | 5.4:-75596544 | MS.gene020834:CDS |
| TTAAGGAGGTGTCTAATGAA+TGG | 0.538054 | 5.4:-75596080 | MS.gene020834:CDS |
| TACTGGTGAAGCTCTTGGTA+GGG | 0.540570 | 5.4:-75596343 | MS.gene020834:CDS |
| TTCATGGAAGCTATAGCTGC+TGG | 0.543301 | 5.4:-75596519 | MS.gene020834:CDS |
| AATCCTGTTGCCAAAAGTGT+TGG | 0.544511 | 5.4:+75594877 | None:intergenic |
| TGATGCTGACATGCCACCAT+TGG | 0.545200 | 5.4:-75594804 | MS.gene020834:CDS |
| GGTCAGCTCAAGGAATTTGA+GGG | 0.548038 | 5.4:-75595328 | MS.gene020834:CDS |
| GTGTGGGAGTCCCAAGCTGG+TGG | 0.550695 | 5.4:-75596390 | MS.gene020834:CDS |
| CTGTTCGTCATCATTGTGCT+TGG | 0.552015 | 5.4:+75596416 | None:intergenic |
| TTAACAAAGCTAAGATACTC+AGG | 0.554583 | 5.4:+75595784 | None:intergenic |
| ATAATGTGAATGAACAGCTC+TGG | 0.554976 | 5.4:+75596755 | None:intergenic |
| TAAGGTCATCAGGAAGAACT+TGG | 0.555403 | 5.4:-75595692 | MS.gene020834:CDS |
| CCTTCTTCCTAAGCTTCTCA+AGG | 0.555668 | 5.4:+75595398 | None:intergenic |
| TTCTCCAAGAACTTGAAGCT+GGG | 0.557914 | 5.4:-75595598 | MS.gene020834:CDS |
| CTACTGGTGAAGCTCTTGGT+AGG | 0.561530 | 5.4:-75596344 | MS.gene020834:CDS |
| GGAAACGTGCTGATGCTGAC+AGG | 0.562915 | 5.4:-75594979 | MS.gene020834:CDS |
| TAGTGACTGGTGAGTATGGT+TGG | 0.563826 | 5.4:-75595123 | MS.gene020834:CDS |
| CAGTGAATGACCCACCAGCT+TGG | 0.566153 | 5.4:+75596379 | None:intergenic |
| GGACTATGTTACCAGGATGA+AGG | 0.567325 | 5.4:-75595485 | MS.gene020834:CDS |
| GAAAGAGATTTCTGATGATG+AGG | 0.568419 | 5.4:-75596187 | MS.gene020834:CDS |
| TCTTGAGGAACGCCGTCTGA+AGG | 0.568654 | 5.4:-75596277 | MS.gene020834:CDS |
| CAAAAGTGTTGGGCTCATCA+AGG | 0.569013 | 5.4:+75594888 | None:intergenic |
| AGAGGGAAGCAAGATGGAAG+AGG | 0.571151 | 5.4:-75594762 | MS.gene020834:CDS |
| TGGGTCATTCACTGTGACCA+GGG | 0.573714 | 5.4:-75596370 | MS.gene020834:CDS |
| CAAGGAGGTGTTGGGTGACA+AGG | 0.575150 | 5.4:-75595194 | MS.gene020834:CDS |
| GGTAACATAGTCCTTGAGGC+TGG | 0.577318 | 5.4:+75595495 | None:intergenic |
| GGGATATGAAGTGATTTACA+TGG | 0.578493 | 5.4:-75595377 | MS.gene020834:CDS |
| CCTCCATGATGGGATTCTCA+GGG | 0.578771 | 5.4:+75595008 | None:intergenic |
| ACAACCTAGGTACCATTGCT+AGG | 0.579010 | 5.4:-75596557 | MS.gene020834:CDS |
| TGTCGGTCAAGCCCTCAAAA+CGG | 0.582332 | 5.4:+75596798 | None:intergenic |
| GCAGATTTGGTGAACAACCT+AGG | 0.583680 | 5.4:-75596570 | MS.gene020834:intron |
| AGCAGAAGCCTATTTGGATG+AGG | 0.584932 | 5.4:-75596044 | MS.gene020834:CDS |
| ACTGGTGAAGCTCTTGGTAG+GGG | 0.586981 | 5.4:-75596342 | MS.gene020834:CDS |
| GAAGTTGATTGATCTCAGCC+TGG | 0.587212 | 5.4:+75597659 | None:intergenic |
| CAGACCTAGCAATGGTACCT+AGG | 0.590700 | 5.4:+75596553 | None:intergenic |
| CATCACCACTCTTGGTGGAG+TGG | 0.592725 | 5.4:+75595524 | None:intergenic |
| TAAGGTTGAGGAAGTAGACG+AGG | 0.592744 | 5.4:-75596136 | MS.gene020834:CDS |
| CAACCCTGAGAATCCCATCA+TGG | 0.597286 | 5.4:-75595011 | MS.gene020834:CDS |
| ATCCCATCATGGAGGAGCTG+AGG | 0.597622 | 5.4:-75595000 | MS.gene020834:CDS |
| GTATGCTGTTGGTCAGCTCA+AGG | 0.599835 | 5.4:-75595338 | MS.gene020834:CDS |
| GAAGTTCGACAATCTTTGCA+AGG | 0.601872 | 5.4:-75595221 | MS.gene020834:CDS |
| GAAGCTGATGCTGATGCAGA+GGG | 0.602230 | 5.4:-75594779 | MS.gene020834:CDS |
| TGATGCAGAGGGAAGCAAGA+TGG | 0.604134 | 5.4:-75594768 | MS.gene020834:CDS |
| CAGGAATGACAAATCTGTGA+AGG | 0.605359 | 5.4:-75594960 | MS.gene020834:CDS |
| GATTTCTGATGATGAGGACG+AGG | 0.608743 | 5.4:-75596181 | MS.gene020834:CDS |
| TCCTGGTAACATAGTCCTTG+AGG | 0.608835 | 5.4:+75595491 | None:intergenic |
| TAGTGTCTGCAACTAAAGAA+GGG | 0.609080 | 5.4:-75595297 | MS.gene020834:CDS |
| GCCTCAAGGACTATGTTACC+AGG | 0.610223 | 5.4:-75595492 | MS.gene020834:CDS |
| CATGTCAAGCAAGAAGACAA+TGG | 0.611061 | 5.4:-75595038 | MS.gene020834:CDS |
| CAATAACCTTCTCAGCAACA+AGG | 0.612540 | 5.4:+75596445 | None:intergenic |
| TATGTGTGGGAGTCCCAAGC+TGG | 0.615041 | 5.4:-75596393 | MS.gene020834:CDS |
| AGCTTTGAGGGATAGCAGCA+TGG | 0.615872 | 5.4:-75595068 | MS.gene020834:CDS |
| AATAACTCTCATCCTAAAGG+AGG | 0.618093 | 5.4:-75596313 | MS.gene020834:CDS |
| GCTTGGTCTTAGCATTGATG+AGG | 0.619021 | 5.4:-75594840 | MS.gene020834:CDS |
| CAACATGGAGAGGATCATGA+AGG | 0.620851 | 5.4:-75595095 | MS.gene020834:CDS |
| GTTGAAACTTGACGAGAGTG+AGG | 0.621123 | 5.4:-75595275 | MS.gene020834:CDS |
| ACTGTGACCAGGGATACTAC+TGG | 0.624760 | 5.4:-75596360 | MS.gene020834:CDS |
| GGATCAACTTGAGTATCTTG+AGG | 0.629396 | 5.4:-75596292 | MS.gene020834:CDS |
| AGCAAGGAGAATCGACAACA+CGG | 0.631988 | 5.4:+75595149 | None:intergenic |
| TAAGGGTATTGTGGACTCTG+AGG | 0.633755 | 5.4:-75595764 | MS.gene020834:CDS |
| AGGTACCACTCCACCAAGAG+TGG | 0.636721 | 5.4:-75595529 | MS.gene020834:CDS |
| GCAATTGATGAGTATGCTGT+TGG | 0.641021 | 5.4:-75595349 | MS.gene020834:CDS |
| GTATGGTTGGACTGCCAACA+TGG | 0.641083 | 5.4:-75595110 | MS.gene020834:CDS |
| TCTTAACCAAGTCCTTCAGA+CGG | 0.644789 | 5.4:+75596265 | None:intergenic |
| TGTGGGAGTCCCAAGCTGGT+GGG | 0.646830 | 5.4:-75596389 | MS.gene020834:CDS |
| GCATCAGCTTCCTCCAATGG+TGG | 0.651686 | 5.4:+75594791 | None:intergenic |
| AAGGTGATCAAGGAGGTGTT+GGG | 0.654251 | 5.4:-75595202 | MS.gene020834:CDS |
| TGATGACATGACCAGCCTCA+AGG | 0.657377 | 5.4:-75595506 | MS.gene020834:CDS |
| CCTAAGCTTCTCAAGGAAGG+GGG | 0.664638 | 5.4:+75595405 | None:intergenic |
| GTTGGACTGCCAACATGGAG+AGG | 0.668192 | 5.4:-75595105 | MS.gene020834:CDS |
| TATGTTACCAGGATGAAGGA+AGG | 0.670222 | 5.4:-75595481 | MS.gene020834:CDS |
| GGAAGCTGATGCTGATGCAG+AGG | 0.671926 | 5.4:-75594780 | MS.gene020834:CDS |
| AGTTGTCCATGATGAAAACA+CGG | 0.681053 | 5.4:+75595821 | None:intergenic |
| TCACCAGTCACTAAACAGCA+AGG | 0.682332 | 5.4:+75595133 | None:intergenic |
| GAAGCCAGAGGAGATTACAA+AGG | 0.683556 | 5.4:-75596022 | MS.gene020834:CDS |
| CTTGAAGCTGGGTATCCATG+AGG | 0.697436 | 5.4:-75595587 | MS.gene020834:CDS |
| ATGATGACGAACAGTATGTG+TGG | 0.698166 | 5.4:-75596407 | MS.gene020834:CDS |
| CTTGGTACCAGACCTAGCAA+TGG | 0.700707 | 5.4:+75596545 | None:intergenic |
| TTTCATCATGGACAACTGTG+AGG | 0.702798 | 5.4:-75595815 | MS.gene020834:CDS |
| CCCTGAGAATCCCATCATGG+AGG | 0.716906 | 5.4:-75595008 | MS.gene020834:CDS |
| TATTTGGATGAGGAAGCCAG+AGG | 0.740409 | 5.4:-75596034 | MS.gene020834:CDS |
| TGATGACGAACAGTATGTGT+GGG | 0.740423 | 5.4:-75596406 | MS.gene020834:CDS |
| TCTTTGCAAGGTGATCAAGG+AGG | 0.803604 | 5.4:-75595209 | MS.gene020834:CDS |
| TGTCCATGATGAAAACACGG+CGG | 0.827708 | 5.4:+75595824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATTCAATTTCAATTT+AGG | + | chr5.4:75595253-75595272 | None:intergenic | 10.0% |
| !! | AAAAAAATGATCACATAATA+AGG | + | chr5.4:75595302-75595321 | None:intergenic | 15.0% |
| !! | ACTTTCATTCATATAATTAA+AGG | + | chr5.4:75595411-75595430 | None:intergenic | 15.0% |
| !! | ATGAATGATATTGTTATAAT+CGG | - | chr5.4:75595353-75595372 | MS.gene020834:CDS | 15.0% |
| !! | TAATTGATTATATACTCTTA+GGG | - | chr5.4:75595017-75595036 | MS.gene020834:CDS | 15.0% |
| !! | TCTAATACTTTGATATATTA+GGG | - | chr5.4:75595512-75595531 | MS.gene020834:CDS | 15.0% |
| !! | TTAATTGATTATATACTCTT+AGG | - | chr5.4:75595016-75595035 | MS.gene020834:CDS | 15.0% |
| !!! | AAATTGAATTTTAATTAGTC+CGG | - | chr5.4:75595259-75595278 | MS.gene020834:CDS | 15.0% |
| !!! | GGATTATTTTTTCAATTTTA+GGG | - | chr5.4:75594987-75595006 | MS.gene020834:CDS | 15.0% |
| !!! | TGGATTATTTTTTCAATTTT+AGG | - | chr5.4:75594986-75595005 | MS.gene020834:CDS | 15.0% |
| !! | GTCTAATACTTTGATATATT+AGG | - | chr5.4:75595511-75595530 | MS.gene020834:CDS | 20.0% |
| !!! | ATGATTTTTTAGTCATGTTT+AGG | - | chr5.4:75595103-75595122 | MS.gene020834:CDS | 20.0% |
| !!! | TCTTTTGTTATCGTTTTTAT+TGG | - | chr5.4:75594966-75594985 | MS.gene020834:CDS | 20.0% |
| !!! | TGTTTTTATGAATCAGAAAT+TGG | - | chr5.4:75595782-75595801 | MS.gene020834:CDS | 20.0% |
| ! | AATGACATTTACTACATTAC+CGG | - | chr5.4:75596985-75597004 | MS.gene020834:intron | 25.0% |
| ! | ACATGACTAAAAAATCATCA+CGG | + | chr5.4:75595101-75595120 | None:intergenic | 25.0% |
| ! | ATACTTTGATATATTAGGGT+TGG | - | chr5.4:75595516-75595535 | MS.gene020834:CDS | 25.0% |
| ! | ATTGTGATGAATGTTCTATA+CGG | - | chr5.4:75595152-75595171 | MS.gene020834:CDS | 25.0% |
| ! | GAAGAAAAAGAAGAAGATTA+AGG | - | chr5.4:75596342-75596361 | MS.gene020834:CDS | 25.0% |
| ! | TAAAATAACTCTCATCCTAA+AGG | - | chr5.4:75596123-75596142 | MS.gene020834:CDS | 25.0% |
| !! | ATATATTAGGGTTGGATTTT+AGG | - | chr5.4:75595524-75595543 | MS.gene020834:CDS | 25.0% |
| !! | ATTATATACTCTTAGGGTTT+TGG | - | chr5.4:75595023-75595042 | MS.gene020834:CDS | 25.0% |
| !! | GAATGATGATTTTATTGTTG+TGG | - | chr5.4:75595559-75595578 | MS.gene020834:CDS | 25.0% |
| !!! | CAATACTTTTTACAGTAACA+AGG | - | chr5.4:75594816-75594835 | MS.gene020834:CDS | 25.0% |
| ACTTTGACTATCATTGATAG+TGG | - | chr5.4:75595726-75595745 | MS.gene020834:CDS | 30.0% | |
| ATCTCTCTTGAAATGTTAAG+TGG | + | chr5.4:75596706-75596725 | None:intergenic | 30.0% | |
| GAAAAAGAAGAAGATTAAGG+AGG | - | chr5.4:75596345-75596364 | MS.gene020834:CDS | 30.0% | |
| TAGCTATCCAATTTCTCTTT+GGG | - | chr5.4:75596213-75596232 | MS.gene020834:CDS | 30.0% | |
| TATTGTTCTGATTCTTGTGT+TGG | - | chr5.4:75595589-75595608 | MS.gene020834:CDS | 30.0% | |
| TGAGGATGAAAAGAAAAAGA+TGG | - | chr5.4:75597182-75597201 | MS.gene020834:intron | 30.0% | |
| TTAACAAAGCTAAGATACTC+AGG | + | chr5.4:75596658-75596677 | None:intergenic | 30.0% | |
| TTAGCTATCCAATTTCTCTT+TGG | - | chr5.4:75596212-75596231 | MS.gene020834:CDS | 30.0% | |
| TTTGTGTCAAAGAGATCAAA+AGG | + | chr5.4:75596565-75596584 | None:intergenic | 30.0% | |
| ! | TCTGTTTTATGTTGCAGATT+TGG | - | chr5.4:75595856-75595875 | MS.gene020834:CDS | 30.0% |
| !! | AATGATAGTCAAAGTGTTGT+TGG | + | chr5.4:75595721-75595740 | None:intergenic | 30.0% |
| !! | AGACTACAACAAGTTTTATG+AGG | - | chr5.4:75596816-75596835 | MS.gene020834:intron | 30.0% |
| !! | ATCGGCACTTTAATTTTTGA+AGG | - | chr5.4:75595371-75595390 | MS.gene020834:CDS | 30.0% |
| !! | GAGTATCTTAGCTTTGTTAA+GGG | - | chr5.4:75596658-75596677 | MS.gene020834:intron | 30.0% |
| !! | TGAGTATCTTAGCTTTGTTA+AGG | - | chr5.4:75596657-75596676 | MS.gene020834:intron | 30.0% |
| AATAACTCTCATCCTAAAGG+AGG | - | chr5.4:75596126-75596145 | MS.gene020834:CDS | 35.0% | |
| ACATACAGCTTGATGTTGTT+GGG | + | chr5.4:75596595-75596614 | None:intergenic | 35.0% | |
| AGTTGTCCATGATGAAAACA+CGG | + | chr5.4:75596621-75596640 | None:intergenic | 35.0% | |
| ATAATGTGAATGAACAGCTC+TGG | + | chr5.4:75595687-75595706 | None:intergenic | 35.0% | |
| GAAAAAGATGGAAGAACAGA+AGG | - | chr5.4:75597194-75597213 | MS.gene020834:intron | 35.0% | |
| GAAGAAGAAGAAGCTTACAT+CGG | + | chr5.4:75594875-75594894 | None:intergenic | 35.0% | |
| GGATTGATATCAATACAAGC+CGG | + | chr5.4:75595281-75595300 | None:intergenic | 35.0% | |
| GGGATATGAAGTGATTTACA+TGG | - | chr5.4:75597062-75597081 | MS.gene020834:intron | 35.0% | |
| TAGTGTCTGCAACTAAAGAA+GGG | - | chr5.4:75597142-75597161 | MS.gene020834:intron | 35.0% | |
| TATAGCTTCCATGAATTCCT+TGG | + | chr5.4:75595915-75595934 | None:intergenic | 35.0% | |
| TCAACAGAACAAGATCCTTA+AGG | - | chr5.4:75596729-75596748 | MS.gene020834:CDS | 35.0% | |
| TTCTCAACCCAAAGAGAAAT+TGG | + | chr5.4:75596223-75596242 | None:intergenic | 35.0% | |
| ! | GAAAGAGATTTCTGATGATG+AGG | - | chr5.4:75596252-75596271 | MS.gene020834:CDS | 35.0% |
| ! | TTGGATAAGATCCGTTTTGA+GGG | - | chr5.4:75595630-75595649 | MS.gene020834:CDS | 35.0% |
| ! | TTTGGATAAGATCCGTTTTG+AGG | - | chr5.4:75595629-75595648 | MS.gene020834:CDS | 35.0% |
| !! | ACTATCATTGATAGTGGCAT+TGG | - | chr5.4:75595732-75595751 | MS.gene020834:CDS | 35.0% |
| !! | CTTTGAAATTGCTGAGAACA+AGG | - | chr5.4:75596792-75596811 | MS.gene020834:CDS | 35.0% |
| !! | TAGCTTTGTTAAGGGTATTG+TGG | - | chr5.4:75596666-75596685 | MS.gene020834:intron | 35.0% |
| !! | TATACTCTTAGGGTTTTGGT+TGG | - | chr5.4:75595027-75595046 | MS.gene020834:CDS | 35.0% |
| !! | TTAAGGAGGTGTCTAATGAA+TGG | - | chr5.4:75596359-75596378 | MS.gene020834:CDS | 35.0% |
| !!! | TCTTGTTTTGAGAATCCTCA+TGG | + | chr5.4:75596870-75596889 | None:intergenic | 35.0% |
| AACAGCTTTCTTGCTTTCAC+CGG | + | chr5.4:75597007-75597026 | None:intergenic | 40.0% | |
| ACAAGAGTCTCACCAATGAT+TGG | - | chr5.4:75596458-75596477 | MS.gene020834:CDS | 40.0% | |
| ACAAGATCCTTAAGGTCATC+AGG | - | chr5.4:75596737-75596756 | MS.gene020834:CDS | 40.0% | |
| AGTAGACGAGGAGAAAGAAA+AGG | - | chr5.4:75596315-75596334 | MS.gene020834:CDS | 40.0% | |
| AGTTCTTCCTGATGACCTTA+AGG | + | chr5.4:75596747-75596766 | None:intergenic | 40.0% | |
| CAAATGCTCTTCCCAATCAT+TGG | + | chr5.4:75596473-75596492 | None:intergenic | 40.0% | |
| CAAGAGTCTCACCAATGATT+GGG | - | chr5.4:75596459-75596478 | MS.gene020834:CDS | 40.0% | |
| CAATAACCTTCTCAGCAACA+AGG | + | chr5.4:75595997-75596016 | None:intergenic | 40.0% | |
| CAATCTTTGCAAGGTGATCA+AGG | - | chr5.4:75597227-75597246 | MS.gene020834:intron | 40.0% | |
| CAGGAATGACAAATCTGTGA+AGG | - | chr5.4:75597479-75597498 | MS.gene020834:intron | 40.0% | |
| CATGTCAAGCAAGAAGACAA+TGG | - | chr5.4:75597401-75597420 | MS.gene020834:intron | 40.0% | |
| CTAGTGTCTGCAACTAAAGA+AGG | - | chr5.4:75597141-75597160 | MS.gene020834:intron | 40.0% | |
| CTTGAGAAGCTTAGGAAGAA+GGG | - | chr5.4:75597042-75597061 | MS.gene020834:intron | 40.0% | |
| GAAGTTCGACAATCTTTGCA+AGG | - | chr5.4:75597218-75597237 | MS.gene020834:intron | 40.0% | |
| GAATGTTGTGTTGTAGGCTT+TGG | - | chr5.4:75595611-75595630 | MS.gene020834:CDS | 40.0% | |
| GACATACAGCTTGATGTTGT+TGG | + | chr5.4:75596596-75596615 | None:intergenic | 40.0% | |
| GCAATTGATGAGTATGCTGT+TGG | - | chr5.4:75597090-75597109 | MS.gene020834:intron | 40.0% | |
| GGATCAACTTGAGTATCTTG+AGG | - | chr5.4:75596147-75596166 | MS.gene020834:CDS | 40.0% | |
| GGTGTCTAATGAATGGTCTT+TGG | - | chr5.4:75596366-75596385 | MS.gene020834:CDS | 40.0% | |
| GTGAGTATGATTGGACAGTT+TGG | - | chr5.4:75595950-75595969 | MS.gene020834:CDS | 40.0% | |
| GTGTTGGAATGTTGTGTTGT+AGG | - | chr5.4:75595605-75595624 | MS.gene020834:CDS | 40.0% | |
| GTTAAGCACTTCTCTGTTGA+GGG | - | chr5.4:75596496-75596515 | MS.gene020834:CDS | 40.0% | |
| TAAGGTCATCAGGAAGAACT+TGG | - | chr5.4:75596747-75596766 | MS.gene020834:CDS | 40.0% | |
| TATGTTACCAGGATGAAGGA+AGG | - | chr5.4:75596958-75596977 | MS.gene020834:intron | 40.0% | |
| TCACGGTGTTCAAACAACAA+CGG | + | chr5.4:75595084-75595103 | None:intergenic | 40.0% | |
| TCATCCTTTGTAATCTCCTC+TGG | + | chr5.4:75596424-75596443 | None:intergenic | 40.0% | |
| TCTTAACCAAGTCCTTCAGA+CGG | + | chr5.4:75596177-75596196 | None:intergenic | 40.0% | |
| TGAACAAGCAGAAGCCTATT+TGG | - | chr5.4:75596389-75596408 | MS.gene020834:CDS | 40.0% | |
| TGTTAAGCACTTCTCTGTTG+AGG | - | chr5.4:75596495-75596514 | MS.gene020834:CDS | 40.0% | |
| TGTTTAGTGACTGGTGAGTA+TGG | - | chr5.4:75597312-75597331 | MS.gene020834:intron | 40.0% | |
| TTCCTAAGCTTCTCAAGGAA+GGG | + | chr5.4:75597039-75597058 | None:intergenic | 40.0% | |
| TTCTCCAAGAACTTGAAGCT+GGG | - | chr5.4:75596841-75596860 | MS.gene020834:intron | 40.0% | |
| TTTCATCATGGACAACTGTG+AGG | - | chr5.4:75596624-75596643 | MS.gene020834:intron | 40.0% | |
| TTTCTCCAAGAACTTGAAGC+TGG | - | chr5.4:75596840-75596859 | MS.gene020834:intron | 40.0% | |
| ! | AAACGTTAGCTTACCAGCTT+TGG | + | chr5.4:75595763-75595782 | None:intergenic | 40.0% |
| ! | AATCCTGTTGCCAAAAGTGT+TGG | + | chr5.4:75597565-75597584 | None:intergenic | 40.0% |
| ! | AGAATCAAGCTTGCTCTTGT+CGG | + | chr5.4:75595661-75595680 | None:intergenic | 40.0% |
| ! | ATGATGACGAACAGTATGTG+TGG | - | chr5.4:75596032-75596051 | MS.gene020834:CDS | 40.0% |
| ! | TGATGACGAACAGTATGTGT+GGG | - | chr5.4:75596033-75596052 | MS.gene020834:CDS | 40.0% |
| !! | AAAGTGTTGTTGGTCTTGTC+AGG | + | chr5.4:75595711-75595730 | None:intergenic | 40.0% |
| !! | ACTCAAGTTGATCCTCCTTT+AGG | + | chr5.4:75596141-75596160 | None:intergenic | 40.0% |
| !! | AGATCAAAAGGTGCTCTCTT+GGG | + | chr5.4:75596553-75596572 | None:intergenic | 40.0% |
| !! | ATCCTGTTGCCAAAAGTGTT+GGG | + | chr5.4:75597564-75597583 | None:intergenic | 40.0% |
| !! | ATGATTGGACAGTTTGGTGT+TGG | - | chr5.4:75595956-75595975 | MS.gene020834:CDS | 40.0% |
| !! | CAATGATTGGGAAGAGCATT+TGG | - | chr5.4:75596471-75596490 | MS.gene020834:CDS | 40.0% |
| ACAACCTAGGTACCATTGCT+AGG | - | chr5.4:75595882-75595901 | MS.gene020834:CDS | 45.0% | |
| AGCAAGGAGAATCGACAACA+CGG | + | chr5.4:75597293-75597312 | None:intergenic | 45.0% | |
| AGCAGAAGCCTATTTGGATG+AGG | - | chr5.4:75596395-75596414 | MS.gene020834:CDS | 45.0% | |
| ATTCACAGGATGCTCAAGCT+TGG | - | chr5.4:75597582-75597601 | MS.gene020834:intron | 45.0% | |
| ATTCTGTCCTTCCTTCATCC+TGG | + | chr5.4:75596968-75596987 | None:intergenic | 45.0% | |
| CAACATGGAGAGGATCATGA+AGG | - | chr5.4:75597344-75597363 | MS.gene020834:intron | 45.0% | |
| CCTTCTTCCTAAGCTTCTCA+AGG | + | chr5.4:75597044-75597063 | None:intergenic | 45.0% | |
| CCTTGAGAAGCTTAGGAAGA+AGG | - | chr5.4:75597041-75597060 | MS.gene020834:intron | 45.0% | |
| CTGTTCGTCATCATTGTGCT+TGG | + | chr5.4:75596026-75596045 | None:intergenic | 45.0% | |
| CTTCATGATCCTCTCCATGT+TGG | + | chr5.4:75597346-75597365 | None:intergenic | 45.0% | |
| CTTCCTAAGCTTCTCAAGGA+AGG | + | chr5.4:75597040-75597059 | None:intergenic | 45.0% | |
| GAAGAGAAGAAGGAAGAGGA+GGG | - | chr5.4:75596280-75596299 | MS.gene020834:CDS | 45.0% | |
| GAAGCCAGAGGAGATTACAA+AGG | - | chr5.4:75596417-75596436 | MS.gene020834:CDS | 45.0% | |
| GAGACTGCTCTTCTTACTTC+TGG | - | chr5.4:75597522-75597541 | MS.gene020834:intron | 45.0% | |
| GATACTACTGGTGAAGCTCT+TGG | - | chr5.4:75596091-75596110 | MS.gene020834:CDS | 45.0% | |
| GGACTATGTTACCAGGATGA+AGG | - | chr5.4:75596954-75596973 | MS.gene020834:intron | 45.0% | |
| GGTCAGCTCAAGGAATTTGA+GGG | - | chr5.4:75597111-75597130 | MS.gene020834:intron | 45.0% | |
| GTCTGGTACCAAGGAATTCA+TGG | - | chr5.4:75595904-75595923 | MS.gene020834:CDS | 45.0% | |
| GTTGAAACTTGACGAGAGTG+AGG | - | chr5.4:75597164-75597183 | MS.gene020834:intron | 45.0% | |
| TAAGGTTGAGGAAGTAGACG+AGG | - | chr5.4:75596303-75596322 | MS.gene020834:CDS | 45.0% | |
| TACTGGTGAAGCTCTTGGTA+GGG | - | chr5.4:75596096-75596115 | MS.gene020834:CDS | 45.0% | |
| TAGTGACTGGTGAGTATGGT+TGG | - | chr5.4:75597316-75597335 | MS.gene020834:intron | 45.0% | |
| TATTTGGATGAGGAAGCCAG+AGG | - | chr5.4:75596405-75596424 | MS.gene020834:CDS | 45.0% | |
| TCACCAGTCACTAAACAGCA+AGG | + | chr5.4:75597309-75597328 | None:intergenic | 45.0% | |
| TCCTAAGCTTCTCAAGGAAG+GGG | + | chr5.4:75597038-75597057 | None:intergenic | 45.0% | |
| TCCTGGTAACATAGTCCTTG+AGG | + | chr5.4:75596951-75596970 | None:intergenic | 45.0% | |
| TCTTTGCAAGGTGATCAAGG+AGG | - | chr5.4:75597230-75597249 | MS.gene020834:intron | 45.0% | |
| TGAGGGTCAGTTGGAGTTTA+AGG | - | chr5.4:75596513-75596532 | MS.gene020834:CDS | 45.0% | |
| TGCTTACCTTGTTGCTGAGA+AGG | - | chr5.4:75595988-75596007 | MS.gene020834:CDS | 45.0% | |
| TGGTCAGCTCAAGGAATTTG+AGG | - | chr5.4:75597110-75597129 | MS.gene020834:intron | 45.0% | |
| TGTCCATGATGAAAACACGG+CGG | + | chr5.4:75596618-75596637 | None:intergenic | 45.0% | |
| TTCATGGAAGCTATAGCTGC+TGG | - | chr5.4:75595920-75595939 | MS.gene020834:CDS | 45.0% | |
| TTCGTCATCATTGTGCTTGG+TGG | + | chr5.4:75596023-75596042 | None:intergenic | 45.0% | |
| ! | CATGAAGGCACAAGCTTTGA+GGG | - | chr5.4:75597359-75597378 | MS.gene020834:intron | 45.0% |
| ! | CTTGATGAGCCCAACACTTT+TGG | - | chr5.4:75597552-75597571 | MS.gene020834:intron | 45.0% |
| ! | CTTTTGGCAACAGGATTCAC+AGG | - | chr5.4:75597568-75597587 | MS.gene020834:intron | 45.0% |
| ! | GAAGTTGATTGATCTCAGCC+TGG | + | chr5.4:75594783-75594802 | None:intergenic | 45.0% |
| ! | GATACCCAGCTTCAAGTTCT+TGG | + | chr5.4:75596848-75596867 | None:intergenic | 45.0% |
| ! | GATTTCTGATGATGAGGACG+AGG | - | chr5.4:75596258-75596277 | MS.gene020834:CDS | 45.0% |
| ! | TCATGAAGGCACAAGCTTTG+AGG | - | chr5.4:75597358-75597377 | MS.gene020834:intron | 45.0% |
| ! | TCTGGCTTCCTCATCCAAAT+AGG | + | chr5.4:75596406-75596425 | None:intergenic | 45.0% |
| !! | AAGGTGATCAAGGAGGTGTT+GGG | - | chr5.4:75597237-75597256 | MS.gene020834:intron | 45.0% |
| !! | CAAAAGTGTTGGGCTCATCA+AGG | + | chr5.4:75597554-75597573 | None:intergenic | 45.0% |
| !! | CTAAGCTTGCTGATTTGCTC+AGG | - | chr5.4:75596890-75596909 | MS.gene020834:intron | 45.0% |
| !! | GAGATCAAAAGGTGCTCTCT+TGG | + | chr5.4:75596554-75596573 | None:intergenic | 45.0% |
| !! | GCAGATTTGGTGAACAACCT+AGG | - | chr5.4:75595869-75595888 | MS.gene020834:CDS | 45.0% |
| !! | GCTTGGTCTTAGCATTGATG+AGG | - | chr5.4:75597599-75597618 | MS.gene020834:CDS | 45.0% |
| !! | GGTGCTGATGTGAGTATGAT+TGG | - | chr5.4:75595941-75595960 | MS.gene020834:CDS | 45.0% |
| !! | TAAGGGTATTGTGGACTCTG+AGG | - | chr5.4:75596675-75596694 | MS.gene020834:intron | 45.0% |
| !! | TCTCCTTGCTGTTTAGTGAC+TGG | - | chr5.4:75597303-75597322 | MS.gene020834:intron | 45.0% |
| !! | TTTGGTTGGTGGCGTTGTTT+AGG | - | chr5.4:75595041-75595060 | MS.gene020834:CDS | 45.0% |
| !!! | ACTCTTAGGGTTTTGGTTGG+TGG | - | chr5.4:75595030-75595049 | MS.gene020834:CDS | 45.0% |
| !!! | TTTTATTTTTTTGTTTATTA+GGG | - | chr5.4:75594900-75594919 | MS.gene020834:CDS | 5.0% |
| !!! | TTTTTATTTTTTTGTTTATT+AGG | - | chr5.4:75594899-75594918 | MS.gene020834:CDS | 5.0% |
| ACAAGAGACGTTCGCTTTCC+AGG | - | chr5.4:75594762-75594781 | MS.gene020834:CDS | 50.0% | |
| ACTGGTGAAGCTCTTGGTAG+GGG | - | chr5.4:75596097-75596116 | MS.gene020834:CDS | 50.0% | |
| ACTGTGACCAGGGATACTAC+TGG | - | chr5.4:75596079-75596098 | MS.gene020834:CDS | 50.0% | |
| AGAGGGAAGCAAGATGGAAG+AGG | - | chr5.4:75597677-75597696 | MS.gene020834:CDS | 50.0% | |
| AGCTTCACCAGTAGTATCCC+TGG | + | chr5.4:75596089-75596108 | None:intergenic | 50.0% | |
| AGTGAATGACCCACCAGCTT+GGG | + | chr5.4:75596062-75596081 | None:intergenic | 50.0% | |
| CAACCCTGAGAATCCCATCA+TGG | - | chr5.4:75597428-75597447 | MS.gene020834:intron | 50.0% | |
| CAGACCTAGCAATGGTACCT+AGG | + | chr5.4:75595889-75595908 | None:intergenic | 50.0% | |
| CATGTCATCACCACTCTTGG+TGG | + | chr5.4:75596923-75596942 | None:intergenic | 50.0% | |
| CATTGCTAGGTCTGGTACCA+AGG | - | chr5.4:75595895-75595914 | MS.gene020834:CDS | 50.0% | |
| CCTAAGCTTCTCAAGGAAGG+GGG | + | chr5.4:75597037-75597056 | None:intergenic | 50.0% | |
| CGAGGAAGAGAAGAAGGAAG+AGG | - | chr5.4:75596276-75596295 | MS.gene020834:CDS | 50.0% | |
| CTACTGGTGAAGCTCTTGGT+AGG | - | chr5.4:75596095-75596114 | MS.gene020834:CDS | 50.0% | |
| CTAGGTACCATTGCTAGGTC+TGG | - | chr5.4:75595887-75595906 | MS.gene020834:CDS | 50.0% | |
| CTTCTCTGTTGAGGGTCAGT+TGG | - | chr5.4:75596504-75596523 | MS.gene020834:CDS | 50.0% | |
| CTTGAAGCTGGGTATCCATG+AGG | - | chr5.4:75596852-75596871 | MS.gene020834:intron | 50.0% | |
| CTTGGTACCAGACCTAGCAA+TGG | + | chr5.4:75595897-75595916 | None:intergenic | 50.0% | |
| GAAGAAGGAAGAGGAGGGTA+AGG | - | chr5.4:75596285-75596304 | MS.gene020834:CDS | 50.0% | |
| GAAGCTGATGCTGATGCAGA+GGG | - | chr5.4:75597660-75597679 | MS.gene020834:CDS | 50.0% | |
| GCCTCAAGGACTATGTTACC+AGG | - | chr5.4:75596947-75596966 | MS.gene020834:intron | 50.0% | |
| GGAAGAGAAGAAGGAAGAGG+AGG | - | chr5.4:75596279-75596298 | MS.gene020834:CDS | 50.0% | |
| GGGTGACAAGGTTGAGAAAG+TGG | - | chr5.4:75597257-75597276 | MS.gene020834:intron | 50.0% | |
| GGTAACATAGTCCTTGAGGC+TGG | + | chr5.4:75596947-75596966 | None:intergenic | 50.0% | |
| GGTCATGTCATCACCACTCT+TGG | + | chr5.4:75596926-75596945 | None:intergenic | 50.0% | |
| GTATGCTGTTGGTCAGCTCA+AGG | - | chr5.4:75597101-75597120 | MS.gene020834:intron | 50.0% | |
| GTATGGTTGGACTGCCAACA+TGG | - | chr5.4:75597329-75597348 | MS.gene020834:intron | 50.0% | |
| TCAGCATCAGCTTCCTCCAA+TGG | + | chr5.4:75597654-75597673 | None:intergenic | 50.0% | |
| TGAGGACGAGGAAGAGAAGA+AGG | - | chr5.4:75596270-75596289 | MS.gene020834:CDS | 50.0% | |
| TGATGACATGACCAGCCTCA+AGG | - | chr5.4:75596933-75596952 | MS.gene020834:intron | 50.0% | |
| TGATGCAGAGGGAAGCAAGA+TGG | - | chr5.4:75597671-75597690 | MS.gene020834:CDS | 50.0% | |
| TGATGCTGACATGCCACCAT+TGG | - | chr5.4:75597635-75597654 | MS.gene020834:CDS | 50.0% | |
| TGGGTCATTCACTGTGACCA+GGG | - | chr5.4:75596069-75596088 | MS.gene020834:CDS | 50.0% | |
| TGTCGGTCAAGCCCTCAAAA+CGG | + | chr5.4:75595644-75595663 | None:intergenic | 50.0% | |
| TTCCTCAGCTCCTCCATGAT+GGG | + | chr5.4:75597444-75597463 | None:intergenic | 50.0% | |
| TTTCCTCAGCTCCTCCATGA+TGG | + | chr5.4:75597445-75597464 | None:intergenic | 50.0% | |
| ! | AGCCCAACACTTTTGGCAAC+AGG | - | chr5.4:75597559-75597578 | MS.gene020834:intron | 50.0% |
| ! | CAAGGTGATCAAGGAGGTGT+TGG | - | chr5.4:75597236-75597255 | MS.gene020834:intron | 50.0% |
| ! | CCTCCATGATGGGATTCTCA+GGG | + | chr5.4:75597434-75597453 | None:intergenic | 50.0% |
| ! | GGCATTGGAATGACCAAAGC+TGG | - | chr5.4:75595747-75595766 | MS.gene020834:CDS | 50.0% |
| ! | TCCTCCATGATGGGATTCTC+AGG | + | chr5.4:75597435-75597454 | None:intergenic | 50.0% |
| ! | TGTCCGCCGTGTTTTCATCA+TGG | - | chr5.4:75596612-75596631 | MS.gene020834:intron | 50.0% |
| !! | AGCTTTGAGGGATAGCAGCA+TGG | - | chr5.4:75597371-75597390 | MS.gene020834:intron | 50.0% |
| AGGTACCACTCCACCAAGAG+TGG | - | chr5.4:75596910-75596929 | MS.gene020834:intron | 55.0% | |
| ATCCCATCATGGAGGAGCTG+AGG | - | chr5.4:75597439-75597458 | MS.gene020834:intron | 55.0% | |
| CAGTGAATGACCCACCAGCT+TGG | + | chr5.4:75596063-75596082 | None:intergenic | 55.0% | |
| CATCACCACTCTTGGTGGAG+TGG | + | chr5.4:75596918-75596937 | None:intergenic | 55.0% | |
| CCCCCTTCCTTGAGAAGCTT+AGG | - | chr5.4:75597034-75597053 | MS.gene020834:intron | 55.0% | |
| CCCTGAGAATCCCATCATGG+AGG | - | chr5.4:75597431-75597450 | MS.gene020834:intron | 55.0% | |
| GCATCAGCTTCCTCCAATGG+TGG | + | chr5.4:75597651-75597670 | None:intergenic | 55.0% | |
| GGAAGAGGAGGGTAAGGTTG+AGG | - | chr5.4:75596291-75596310 | MS.gene020834:CDS | 55.0% | |
| GGAAGCTGATGCTGATGCAG+AGG | - | chr5.4:75597659-75597678 | MS.gene020834:CDS | 55.0% | |
| GTGGGTCATTCACTGTGACC+AGG | - | chr5.4:75596068-75596087 | MS.gene020834:CDS | 55.0% | |
| GTTGGACTGCCAACATGGAG+AGG | - | chr5.4:75597334-75597353 | MS.gene020834:intron | 55.0% | |
| TATGTGTGGGAGTCCCAAGC+TGG | - | chr5.4:75596046-75596065 | MS.gene020834:CDS | 55.0% | |
| TCTTGAGGAACGCCGTCTGA+AGG | - | chr5.4:75596162-75596181 | MS.gene020834:CDS | 55.0% | |
| TGCTGACATGCCACCATTGG+AGG | - | chr5.4:75597638-75597657 | MS.gene020834:CDS | 55.0% | |
| TTGAGGGATAGCAGCATGGC+TGG | - | chr5.4:75597375-75597394 | MS.gene020834:intron | 55.0% | |
| ! | GGAAACGTGCTGATGCTGAC+AGG | - | chr5.4:75597460-75597479 | MS.gene020834:intron | 55.0% |
| !! | CAAGGAGGTGTTGGGTGACA+AGG | - | chr5.4:75597245-75597264 | MS.gene020834:intron | 55.0% |
| GGAACGCCGTCTGAAGGACT+TGG | - | chr5.4:75596168-75596187 | MS.gene020834:CDS | 60.0% | |
| TGTGGGAGTCCCAAGCTGGT+GGG | - | chr5.4:75596050-75596069 | MS.gene020834:CDS | 60.0% | |
| GTGTGGGAGTCCCAAGCTGG+TGG | - | chr5.4:75596049-75596068 | MS.gene020834:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 75594754 | 75597707 | 75594754 | ID=MS.gene020834 |
| chr5.4 | mRNA | 75594754 | 75597707 | 75594754 | ID=MS.gene020834.t1;Parent=MS.gene020834 |
| chr5.4 | exon | 75597585 | 75597707 | 75597585 | ID=MS.gene020834.t1.exon1;Parent=MS.gene020834.t1 |
| chr5.4 | CDS | 75597585 | 75597707 | 75597585 | ID=cds.MS.gene020834.t1;Parent=MS.gene020834.t1 |
| chr5.4 | exon | 75596693 | 75596834 | 75596693 | ID=MS.gene020834.t1.exon2;Parent=MS.gene020834.t1 |
| chr5.4 | CDS | 75596693 | 75596834 | 75596693 | ID=cds.MS.gene020834.t1;Parent=MS.gene020834.t1 |
| chr5.4 | exon | 75594754 | 75596588 | 75594754 | ID=MS.gene020834.t1.exon3;Parent=MS.gene020834.t1 |
| chr5.4 | CDS | 75594754 | 75596588 | 75594754 | ID=cds.MS.gene020834.t1;Parent=MS.gene020834.t1 |
| Gene Sequence |
| Protein sequence |
