Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27084.t1 | XP_003589505.1 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.00E+00 | 1404.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27084.t1 | P35016 | 87.9 | 782 | 94 | 1 | 1 | 781 | 1 | 782 | 0.0e+00 | 1247.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27084.t1 | G7I7Q4 | 99.5 | 781 | 4 | 0 | 1 | 781 | 1 | 781 | 0.0e+00 | 1404.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27084 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene27084 | 0.833077 | 6.56E-56 | -1.69E-46 |
| MS.gene049264 | MS.gene27084 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene27084 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene049567 | MS.gene27084 | 0.825621 | 4.24E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene27084 | 0.821963 | 3.05E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene27084 | 0.819942 | 8.91E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene27084 | 0.805276 | 1.44E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene27084 | 0.843932 | 1.03E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene27084 | 0.842616 | 2.32E-58 | -1.69E-46 |
| MS.gene051490 | MS.gene27084 | 0.844375 | 7.86E-59 | -1.69E-46 |
| MS.gene051744 | MS.gene27084 | 0.90214 | 1.31E-78 | -1.69E-46 |
| MS.gene051757 | MS.gene27084 | 0.800255 | 1.57E-48 | -1.69E-46 |
| MS.gene051862 | MS.gene27084 | 0.809023 | 2.32E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene27084 | 0.801418 | 9.09E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene27084 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene27084 | 0.819736 | 9.93E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene27084 | 0.803352 | 3.63E-49 | -1.69E-46 |
| MS.gene053151 | MS.gene27084 | 0.823746 | 1.17E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene27084 | 0.827377 | 1.62E-54 | -1.69E-46 |
| MS.gene053296 | MS.gene27084 | 0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene053621 | MS.gene27084 | 0.803182 | 3.94E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene27084 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene053647 | MS.gene27084 | 0.826271 | 2.97E-54 | -1.69E-46 |
| MS.gene05410 | MS.gene27084 | 0.819057 | 1.42E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene27084 | 0.82079 | 5.70E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene27084 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene27084 | 0.875536 | 2.85E-68 | -1.69E-46 |
| MS.gene054584 | MS.gene27084 | 0.807471 | 4.97E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene27084 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene27084 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene27084 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene27084 | 0.820077 | 8.30E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene27084 | 0.810732 | 9.96E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene27084 | 0.8138 | 2.13E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene27084 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene27084 | 0.823052 | 1.70E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene27084 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene058477 | MS.gene27084 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene27084 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene27084 | 0.840901 | 6.58E-58 | -1.69E-46 |
| MS.gene060167 | MS.gene27084 | 0.827864 | 1.24E-54 | -1.69E-46 |
| MS.gene060697 | MS.gene27084 | 0.840521 | 8.27E-58 | -1.69E-46 |
| MS.gene060840 | MS.gene27084 | 0.821854 | 3.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81285 | MS.gene27084 | PPI |
| MS.gene63007 | MS.gene27084 | PPI |
| MS.gene026628 | MS.gene27084 | PPI |
| MS.gene27084 | MS.gene30654 | PPI |
| MS.gene81288 | MS.gene27084 | PPI |
| MS.gene81227 | MS.gene27084 | PPI |
| MS.gene38049 | MS.gene27084 | PPI |
| MS.gene49154 | MS.gene27084 | PPI |
| MS.gene58998 | MS.gene27084 | PPI |
| MS.gene38262 | MS.gene27084 | PPI |
| MS.gene59310 | MS.gene27084 | PPI |
| MS.gene061126 | MS.gene27084 | PPI |
| MS.gene37989 | MS.gene27084 | PPI |
| MS.gene026627 | MS.gene27084 | PPI |
| MS.gene020834 | MS.gene27084 | PPI |
| MS.gene38261 | MS.gene27084 | PPI |
| MS.gene029690 | MS.gene27084 | PPI |
| MS.gene27084 | MS.gene006231 | PPI |
| MS.gene27084 | MS.gene75388 | PPI |
| MS.gene37988 | MS.gene27084 | PPI |
| MS.gene040499 | MS.gene27084 | PPI |
| MS.gene33593 | MS.gene27084 | PPI |
| MS.gene60613 | MS.gene27084 | PPI |
| MS.gene27084 | MS.gene62123 | PPI |
| MS.gene75389 | MS.gene27084 | PPI |
| MS.gene020833 | MS.gene27084 | PPI |
| MS.gene38210 | MS.gene27084 | PPI |
| MS.gene62607 | MS.gene27084 | PPI |
| MS.gene020886 | MS.gene27084 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27084.t1 | MTR_1g025430 | 99.511 | 818 | 4 | 0 | 1 | 818 | 1 | 818 | 0.0 | 1644 |
| MS.gene27084.t1 | MTR_6g452990 | 49.508 | 711 | 317 | 7 | 75 | 780 | 2 | 675 | 0.0 | 648 |
| MS.gene27084.t1 | MTR_1g099840 | 47.743 | 731 | 327 | 9 | 75 | 799 | 7 | 688 | 0.0 | 635 |
| MS.gene27084.t1 | MTR_5g096430 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene27084.t1 | MTR_5g096460 | 48.718 | 702 | 319 | 8 | 78 | 775 | 5 | 669 | 0.0 | 618 |
| MS.gene27084.t1 | MTR_5g097320 | 46.164 | 743 | 345 | 15 | 77 | 804 | 89 | 791 | 0.0 | 597 |
| MS.gene27084.t1 | MTR_0009s0390 | 44.912 | 737 | 352 | 15 | 76 | 801 | 80 | 773 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27084.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1244 |
| MS.gene27084.t1 | AT4G24190 | 83.184 | 779 | 126 | 3 | 1 | 778 | 1 | 775 | 0.0 | 1243 |
| MS.gene27084.t1 | AT5G52640 | 49.041 | 730 | 330 | 8 | 75 | 799 | 2 | 694 | 0.0 | 648 |
| MS.gene27084.t1 | AT5G56000 | 47.765 | 716 | 333 | 7 | 75 | 786 | 2 | 680 | 0.0 | 627 |
| MS.gene27084.t1 | AT5G56010 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 617 |
| MS.gene27084.t1 | AT5G56030 | 47.943 | 705 | 326 | 7 | 75 | 775 | 2 | 669 | 0.0 | 616 |
| MS.gene27084.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene27084.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene27084.t1 | AT3G07770 | 47.525 | 707 | 321 | 13 | 77 | 773 | 94 | 760 | 0.0 | 610 |
| MS.gene27084.t1 | AT2G04030 | 45.200 | 750 | 338 | 17 | 75 | 799 | 74 | 775 | 0.0 | 602 |
| MS.gene27084.t1 | AT5G56030 | 46.049 | 734 | 326 | 8 | 75 | 775 | 2 | 698 | 0.0 | 601 |
| MS.gene27084.t1 | AT2G04030 | 45.067 | 750 | 336 | 17 | 75 | 799 | 74 | 772 | 0.0 | 598 |
Find 170 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGGTAAAGAATT+TGG | 0.100722 | 1.1:+530946 | MS.gene27084:CDS |
| CCTTACTGATAAAGACATTT+TGG | 0.114774 | 1.1:+530478 | MS.gene27084:CDS |
| CTCAATCTAATTGGGCAATT+TGG | 0.152816 | 1.1:+531118 | MS.gene27084:CDS |
| GACCCTCCTTGGACACATTT+TGG | 0.171757 | 1.1:-533796 | None:intergenic |
| TTAACTTCCCTATCTATATC+TGG | 0.204471 | 1.1:+532087 | MS.gene27084:CDS |
| AGCTGAAGTTTCAAGGCTTA+TGG | 0.218402 | 1.1:+529953 | MS.gene27084:CDS |
| AGTGGTGATCTCAATCTAAT+TGG | 0.239122 | 1.1:+531109 | MS.gene27084:CDS |
| TTCATCTTCACTTTCCTCCT+TGG | 0.262279 | 1.1:-532316 | None:intergenic |
| TCATCTTCACTTTCCTCCTT+GGG | 0.274450 | 1.1:-532315 | None:intergenic |
| TCTTCCTCTGTAACCTCCTT+TGG | 0.284101 | 1.1:-532450 | None:intergenic |
| GAGGATTTGGTAAAGAATTT+GGG | 0.292920 | 1.1:+530947 | MS.gene27084:CDS |
| CAATTCACTTTACAGTAATA+AGG | 0.298653 | 1.1:+529986 | MS.gene27084:CDS |
| ACCAAGTTCTGGAATGAGTT+TGG | 0.314376 | 1.1:+533273 | MS.gene27084:CDS |
| TTGCTTCCCCAGATATAGAT+AGG | 0.331375 | 1.1:-532095 | None:intergenic |
| TGCATCAAGTATTCATCAAC+TGG | 0.336633 | 1.1:-533743 | None:intergenic |
| CCACTTAGTTAGATCCTTGA+AGG | 0.361563 | 1.1:-533861 | None:intergenic |
| TGGTATGACAAAGGAGGATT+TGG | 0.366719 | 1.1:+530934 | MS.gene27084:CDS |
| ATCTGACTTTCAGGTATGTA+TGG | 0.368320 | 1.1:+531303 | MS.gene27084:intron |
| CCCGAGTTTCAGACCCTCCT+TGG | 0.369926 | 1.1:-533807 | None:intergenic |
| CTCGTCTAACATACAACTTC+AGG | 0.373088 | 1.1:-532748 | None:intergenic |
| GTAGTGGTGACATCAAAATT+TGG | 0.373244 | 1.1:+533956 | MS.gene27084:CDS |
| TCCCGGAGTTCCTTGATGAT+AGG | 0.374294 | 1.1:-534085 | None:intergenic |
| CTTCTTCTTCTCGCAGATCA+AGG | 0.377003 | 1.1:+529466 | MS.gene27084:CDS |
| GGTTCTTAACTACTCTTTCC+CGG | 0.380304 | 1.1:-534102 | None:intergenic |
| GAGGTCAATACACCAAGTTC+TGG | 0.382290 | 1.1:+533262 | MS.gene27084:CDS |
| TCTTTGTCAGTGGACTCGTC+AGG | 0.385604 | 1.1:-533058 | None:intergenic |
| TAAATGATGTGAAGGCTATA+TGG | 0.388507 | 1.1:+532418 | MS.gene27084:CDS |
| TCCAAACTCATTCCAGAACT+TGG | 0.392555 | 1.1:-533274 | None:intergenic |
| TACAAGTCCTGAGGTGCTTT+AGG | 0.402740 | 1.1:-532695 | None:intergenic |
| AGTTTCAAGCTGAAGTTTCA+AGG | 0.404580 | 1.1:+529946 | MS.gene27084:CDS |
| TTGGGTACCATAGCAAAATC+TGG | 0.405084 | 1.1:+530965 | MS.gene27084:CDS |
| TGTAGGCACTGGACAAGATT+AGG | 0.406249 | 1.1:+530447 | MS.gene27084:intron |
| GGTCCTCTTCGGCAAGCTTA+CGG | 0.422206 | 1.1:-533036 | None:intergenic |
| ACTCGCTGGCCTCTTCTTTG+AGG | 0.426467 | 1.1:-531409 | None:intergenic |
| CCAAAATGTCTTTATCAGTA+AGG | 0.426746 | 1.1:-530478 | None:intergenic |
| GTAAAGTGGCTCCATGATAA+AGG | 0.427105 | 1.1:-532629 | None:intergenic |
| CCCGGAGTTCCTTGATGATA+GGG | 0.430409 | 1.1:-534084 | None:intergenic |
| GTGCTTTAGGTGGCACATAA+AGG | 0.430754 | 1.1:-532682 | None:intergenic |
| TGGAACCAGCAAAGAACAAC+TGG | 0.432951 | 1.1:+533551 | MS.gene27084:CDS |
| GCGATGACAAACCTTTATCA+TGG | 0.434104 | 1.1:+532618 | MS.gene27084:CDS |
| TCCTCCTCAACTGTTGCATC+AGG | 0.444473 | 1.1:-534356 | None:intergenic |
| TCTTATCTTCATAATCCATC+AGG | 0.444687 | 1.1:-533769 | None:intergenic |
| TCTATTAGAGACAGAGGTAT+TGG | 0.445475 | 1.1:+530914 | MS.gene27084:CDS |
| ATAGCAAAATCTGGAACTTC+AGG | 0.446829 | 1.1:+530974 | MS.gene27084:CDS |
| CAACGCCAAGCTTGAAATCC+AGG | 0.454983 | 1.1:+530511 | MS.gene27084:CDS |
| TAACTTCCCTATCTATATCT+GGG | 0.461417 | 1.1:+532088 | MS.gene27084:CDS |
| ATTTCTCGTGATACATTCAA+TGG | 0.461649 | 1.1:-532947 | None:intergenic |
| CCAAGGAGGGTCTGAAACTC+GGG | 0.464941 | 1.1:+533807 | MS.gene27084:CDS |
| TTCTAAAGACAAGGAACTAA+AGG | 0.470485 | 1.1:+533835 | MS.gene27084:CDS |
| ACAAACCTGGATTTCAAGCT+TGG | 0.470570 | 1.1:-530516 | None:intergenic |
| TTTGGAAAATCTATTAAACT+TGG | 0.471577 | 1.1:+533291 | MS.gene27084:CDS |
| TACCTCTGTCTCTAATAGAT+AGG | 0.475363 | 1.1:-530910 | None:intergenic |
| GAGAGAAGAAGAAGAGTGGA+AGG | 0.480182 | 1.1:-529439 | None:intergenic |
| TCCAAGGAGGGTCTGAAACT+CGG | 0.480470 | 1.1:+533806 | MS.gene27084:CDS |
| CTAATTGGGCAATTTGGAGT+TGG | 0.481464 | 1.1:+531124 | MS.gene27084:CDS |
| AATTCTAGAAGCAAAATCCT+TGG | 0.482964 | 1.1:-534300 | None:intergenic |
| GGAACTAAAGGAATCCTTCA+AGG | 0.484459 | 1.1:+533847 | MS.gene27084:CDS |
| CCTCTTGACAACATCTGAAT+CGG | 0.488306 | 1.1:-529777 | None:intergenic |
| TTGCAATTTCAGAAGATACA+TGG | 0.492822 | 1.1:+531348 | MS.gene27084:CDS |
| CATCTTCACTTTCCTCCTTG+GGG | 0.498254 | 1.1:-532314 | None:intergenic |
| CAAGCTTACGGATCATATCA+AGG | 0.500174 | 1.1:-533024 | None:intergenic |
| GTGGTGATCTCAATCTAATT+GGG | 0.500326 | 1.1:+531110 | MS.gene27084:CDS |
| CTTTGTCAGTGGACTCGTCA+GGG | 0.500986 | 1.1:-533057 | None:intergenic |
| TTCTTCAGACGCTCAAGGAA+TGG | 0.506178 | 1.1:-533582 | None:intergenic |
| AAGAGAGAGAAGAAGAAGAG+TGG | 0.506230 | 1.1:-529443 | None:intergenic |
| CACAAGGAGTGTTATCCAAT+CGG | 0.507998 | 1.1:-533934 | None:intergenic |
| ATTCTAGAAGCAAAATCCTT+GGG | 0.509254 | 1.1:-534299 | None:intergenic |
| CGACGAGTCTTCTGAGGAAG+AGG | 0.516292 | 1.1:+532151 | MS.gene27084:CDS |
| TGGTGGATCTACTACTTCAT+CGG | 0.517594 | 1.1:-529711 | None:intergenic |
| TCATCAGCTTCGTTTGAAGC+AGG | 0.518350 | 1.1:-534425 | None:intergenic |
| GACTCGTCGTCTTCATCAGC+GGG | 0.518353 | 1.1:-532137 | None:intergenic |
| CTGTCATTGCAATGAGGAAG+TGG | 0.518703 | 1.1:+529410 | None:intergenic |
| ATTTGGTTGGAGTGCAAACA+TGG | 0.519357 | 1.1:+533973 | MS.gene27084:CDS |
| CACTTTCGAAAAGTGCAGTC+TGG | 0.519596 | 1.1:-534259 | None:intergenic |
| TGATAAACGATTTCTGTTGG+TGG | 0.522059 | 1.1:-533328 | None:intergenic |
| CATCGACATTGTCATTTGCA+AGG | 0.523230 | 1.1:-533895 | None:intergenic |
| TACATATCTAGAATGAAAGC+TGG | 0.527032 | 1.1:+533504 | MS.gene27084:CDS |
| CAAAATGTCTTTATCAGTAA+GGG | 0.527688 | 1.1:-530477 | None:intergenic |
| CCCTATCATCAAGGAACTCC+GGG | 0.530085 | 1.1:+534084 | MS.gene27084:CDS |
| GGAAGATGAGACTGAAGTTG+AGG | 0.531983 | 1.1:+534376 | MS.gene27084:CDS |
| TGTGCCACCTAAAGCACCTC+AGG | 0.535240 | 1.1:+532688 | MS.gene27084:CDS |
| GATGCAGATTAAGTTAGATA+AGG | 0.535990 | 1.1:+530877 | MS.gene27084:intron |
| TGTCTTTATCAGTAAGGGAT+AGG | 0.536994 | 1.1:-530472 | None:intergenic |
| CATCACCTTCAGCAGTAAAG+TGG | 0.538199 | 1.1:-532643 | None:intergenic |
| GTATGGGAATCTAAAGCTGA+TGG | 0.541849 | 1.1:+531320 | MS.gene27084:CDS |
| ACCCTATCATCAAGGAACTC+CGG | 0.542750 | 1.1:+534083 | MS.gene27084:CDS |
| TATTAAACTTGGTATCATTG+AGG | 0.544026 | 1.1:+533302 | MS.gene27084:CDS |
| ATACTCTTCCACGTACTCGC+TGG | 0.546272 | 1.1:-531423 | None:intergenic |
| GGATGAGAGTGTGAAGCAAA+CGG | 0.547097 | 1.1:+534223 | MS.gene27084:intron |
| AAGCATACATGCGCGGCAAG+AGG | 0.548258 | 1.1:+534038 | MS.gene27084:CDS |
| AAACTCGGTGCTGTTCCTCA+TGG | 0.549531 | 1.1:+529746 | MS.gene27084:CDS |
| TGGTGACATCAAAATTTGGT+TGG | 0.549849 | 1.1:+533960 | MS.gene27084:CDS |
| GGACTCGTCAGGGTCCTCTT+CGG | 0.550477 | 1.1:-533047 | None:intergenic |
| ATCGACATTGTCATTTGCAA+GGG | 0.551505 | 1.1:-533894 | None:intergenic |
| AGAAGAGGCCAGCGAGTACG+TGG | 0.552899 | 1.1:+531415 | MS.gene27084:CDS |
| GATCCGTAAGCTTGCCGAAG+AGG | 0.555543 | 1.1:+533033 | MS.gene27084:CDS |
| TGCTTCCCCAGATATAGATA+GGG | 0.556945 | 1.1:-532094 | None:intergenic |
| AGCATACATGCGCGGCAAGA+GGG | 0.557652 | 1.1:+534039 | MS.gene27084:CDS |
| TTTCTTGTTGAATGATCCCA+AGG | 0.558398 | 1.1:+534283 | MS.gene27084:CDS |
| TGTGAAGATATCCAACCGAT+TGG | 0.558827 | 1.1:+533919 | MS.gene27084:CDS |
| AGGAGTGTTATCCAATCGGT+TGG | 0.561154 | 1.1:-533930 | None:intergenic |
| TGTGTGTGAATGAAGGGAAT+CGG | 0.561471 | 1.1:+529878 | MS.gene27084:intron |
| TAGAATGAAAGCTGGACAGA+AGG | 0.562025 | 1.1:+533512 | MS.gene27084:CDS |
| GAAGTTCCAAAATGTGTCCA+AGG | 0.562529 | 1.1:+533790 | MS.gene27084:CDS |
| TCCACTGACAAAGAAAAGAA+AGG | 0.563357 | 1.1:+533067 | MS.gene27084:CDS |
| TGGAGCCACTTTACTGCTGA+AGG | 0.565774 | 1.1:+532638 | MS.gene27084:CDS |
| TAAAATACACCTCAAAGAAG+AGG | 0.565903 | 1.1:+531400 | MS.gene27084:CDS |
| TGTCAATTTACCCTCAGACT+TGG | 0.566708 | 1.1:-533469 | None:intergenic |
| TCCTTGATGATAGGGTGTCT+AGG | 0.566886 | 1.1:-534076 | None:intergenic |
| CGGGAAGGATTCTAAAGACA+AGG | 0.569516 | 1.1:+533826 | MS.gene27084:CDS |
| TATTTACAGCACCAAGTCTG+AGG | 0.569728 | 1.1:+533458 | MS.gene27084:intron |
| TCCTAGACACCCTATCATCA+AGG | 0.573259 | 1.1:+534075 | MS.gene27084:CDS |
| TCTAACATACAACTTCAGGT+TGG | 0.576509 | 1.1:-532744 | None:intergenic |
| ACTTCTCCGCATTACTGCGA+AGG | 0.578324 | 1.1:-529920 | None:intergenic |
| ATCTCTGTTCCACGTCCTAG+TGG | 0.579957 | 1.1:-531377 | None:intergenic |
| TGCTTCAAACGAAGCTGATG+AGG | 0.581857 | 1.1:+534427 | MS.gene27084:CDS |
| AGTAGTAGATCCACCAAAGG+TGG | 0.582933 | 1.1:+529718 | MS.gene27084:CDS |
| GGAACTCTTAAATGATGTGA+AGG | 0.585981 | 1.1:+532410 | MS.gene27084:CDS |
| TCCTGATGCAACAGTTGAGG+AGG | 0.586304 | 1.1:+534355 | MS.gene27084:CDS |
| CAGTCCTGATGCAACAGTTG+AGG | 0.589745 | 1.1:+534352 | MS.gene27084:CDS |
| TCTGACTTTCAGGTATGTAT+GGG | 0.590095 | 1.1:+531304 | MS.gene27084:intron |
| TCAAGGATCTAACTAAGTGG+TGG | 0.593513 | 1.1:+533864 | MS.gene27084:CDS |
| CTTCTCCGCATTACTGCGAA+GGG | 0.594891 | 1.1:-529919 | None:intergenic |
| ATTCTACCACTCTCTTGCCA+AGG | 0.602333 | 1.1:+532482 | MS.gene27084:CDS |
| TTCCAAAATGTGTCCAAGGA+GGG | 0.604051 | 1.1:+533794 | MS.gene27084:CDS |
| CAGAGGTATTGGTATGACAA+AGG | 0.604095 | 1.1:+530925 | MS.gene27084:CDS |
| AAATTTCAAGCGAATGCGGA+AGG | 0.606036 | 1.1:+529683 | MS.gene27084:CDS |
| AGACTCGTCGTCTTCATCAG+CGG | 0.606434 | 1.1:-532138 | None:intergenic |
| TTTGATGTCACCACTACACA+AGG | 0.606525 | 1.1:-533950 | None:intergenic |
| GGGAAGCAAAGAGGTTGATG+TGG | 0.608554 | 1.1:+532109 | MS.gene27084:CDS |
| TGAAGACGACGAGTCTTCTG+AGG | 0.608975 | 1.1:+532145 | MS.gene27084:CDS |
| AAGCAAAGAGGTTGATGTGG+AGG | 0.610301 | 1.1:+532112 | MS.gene27084:CDS |
| ATACTTGATGCAATACCTGA+TGG | 0.612459 | 1.1:+533754 | MS.gene27084:CDS |
| GCCTAAAACAAAGACAGTGA+AGG | 0.613840 | 1.1:+532371 | MS.gene27084:CDS |
| CCTTCAAGGATCTAACTAAG+TGG | 0.614149 | 1.1:+533861 | MS.gene27084:CDS |
| ATTTACAGCACCAAGTCTGA+GGG | 0.614924 | 1.1:+533459 | MS.gene27084:intron |
| GAATCCAAAGGAGGTTACAG+AGG | 0.616769 | 1.1:+532446 | MS.gene27084:CDS |
| GAGATCCCTTCGCAGTAATG+CGG | 0.618086 | 1.1:+529914 | MS.gene27084:CDS |
| AACTTCCCTATCTATATCTG+GGG | 0.620396 | 1.1:+532089 | MS.gene27084:CDS |
| ATCCTATCTATTAGAGACAG+AGG | 0.620781 | 1.1:+530908 | MS.gene27084:CDS |
| CCGATTCAGATGTTGTCAAG+AGG | 0.623522 | 1.1:+529777 | MS.gene27084:CDS |
| AAGCTTACGGATCATATCAA+GGG | 0.627367 | 1.1:-533023 | None:intergenic |
| TGGAATGAACCACTAGGACG+TGG | 0.627795 | 1.1:+531368 | MS.gene27084:CDS |
| TCTCTTCTCATCAACATCAG+AGG | 0.630151 | 1.1:-533241 | None:intergenic |
| CTATATCTGGGGAAGCAAAG+AGG | 0.633804 | 1.1:+532100 | MS.gene27084:CDS |
| ATGTGAAGGCTATATGGCTG+AGG | 0.634531 | 1.1:+532424 | MS.gene27084:CDS |
| GTTGAGAAAATGCAGACAAG+TGG | 0.638859 | 1.1:+531091 | MS.gene27084:CDS |
| AAGTCCTGAGGTGCTTTAGG+TGG | 0.640658 | 1.1:-532692 | None:intergenic |
| TCAATCAGCTGAAAGCCCCA+AGG | 0.640725 | 1.1:+532299 | MS.gene27084:intron |
| TCTGATGTTGATGAGAAGAG+AGG | 0.646244 | 1.1:+533243 | MS.gene27084:CDS |
| ATATTACCTTGGCAAGAGAG+TGG | 0.647445 | 1.1:-532488 | None:intergenic |
| GCATCAAGTATTCATCAACT+GGG | 0.657313 | 1.1:-533742 | None:intergenic |
| TGAAGGAAACGACTTACGAG+TGG | 0.661856 | 1.1:+532388 | MS.gene27084:CDS |
| AAATGACGATGGTGATGTCA+AGG | 0.662375 | 1.1:+534451 | MS.gene27084:CDS |
| GTTCCAAAATGTGTCCAAGG+AGG | 0.663752 | 1.1:+533793 | MS.gene27084:CDS |
| GAAGGAAACGACTTACGAGT+GGG | 0.669364 | 1.1:+532389 | MS.gene27084:CDS |
| AGGTATTGGTATGACAAAGG+AGG | 0.676241 | 1.1:+530928 | MS.gene27084:CDS |
| GGATAACACTCCTTGTGTAG+TGG | 0.678484 | 1.1:+533940 | MS.gene27084:CDS |
| GCAAAGTGTCAGAATCAACA+AGG | 0.678755 | 1.1:-532925 | None:intergenic |
| GGAGGGTCTGAAACTCGGGA+AGG | 0.685274 | 1.1:+533811 | MS.gene27084:CDS |
| GATACATGGAATGAACCACT+AGG | 0.687380 | 1.1:+531362 | MS.gene27084:CDS |
| TAACTCTCGTACAAGTCCTG+AGG | 0.691370 | 1.1:-532704 | None:intergenic |
| TGAAGTAGTAGATCCACCAA+AGG | 0.692806 | 1.1:+529715 | MS.gene27084:CDS |
| ATCAGCTGAAAGCCCCAAGG+AGG | 0.696234 | 1.1:+532302 | MS.gene27084:intron |
| ATGGCTGAGGAATCCAAAGG+AGG | 0.701467 | 1.1:+532437 | MS.gene27084:CDS |
| GAATCGGTTGAAAGTCCATG+AGG | 0.719230 | 1.1:-529761 | None:intergenic |
| TATATGGCTGAGGAATCCAA+AGG | 0.735087 | 1.1:+532434 | MS.gene27084:CDS |
| GCTGATGAGGTAAATGACGA+TGG | 0.743848 | 1.1:+534440 | MS.gene27084:CDS |
| CATTTGAAATCAGTTCCCTG+AGG | 0.745225 | 1.1:-530016 | None:intergenic |
| AAGAGTAGTTAAGAACCCTG+AGG | 0.776155 | 1.1:+534108 | MS.gene27084:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTGTTTATCTAAAAA+AGG | + | chr1.1:530834-530853 | MS.gene27084:intron | 10.0% |
| !! | ATACAAGTATGTATAATTTA+AGG | + | chr1.1:532174-532193 | MS.gene27084:intron | 15.0% |
| !! | CAATAAAAAAGAAACTTATT+AGG | + | chr1.1:532996-533015 | MS.gene27084:CDS | 15.0% |
| !! | TATAATAAAAGTGATAGTTT+GGG | - | chr1.1:531464-531483 | None:intergenic | 15.0% |
| !! | TTATAATAAAAGTGATAGTT+TGG | - | chr1.1:531465-531484 | None:intergenic | 15.0% |
| !! | TTATCTATTCAATATACAAT+TGG | + | chr1.1:531995-532014 | MS.gene27084:intron | 15.0% |
| !!! | TAAATGAAAATTTGTTTGTT+AGG | + | chr1.1:529656-529675 | MS.gene27084:intron | 15.0% |
| !! | AAGGTTATAAATCAAATTTG+TGG | + | chr1.1:531664-531683 | MS.gene27084:intron | 20.0% |
| !! | ACAAATAAGTTCTATATTGT+AGG | + | chr1.1:530430-530449 | MS.gene27084:intron | 20.0% |
| !! | ATAATAAAAGTGATAGTTTG+GGG | - | chr1.1:531463-531482 | None:intergenic | 20.0% |
| !! | ATAATTAAAGTATACAAACC+TGG | - | chr1.1:530532-530551 | None:intergenic | 20.0% |
| !! | ATCGTATACAATAATAAGTA+GGG | + | chr1.1:531790-531809 | MS.gene27084:intron | 20.0% |
| !! | ATGTACAAATTATAAATGCA+AGG | - | chr1.1:530389-530408 | None:intergenic | 20.0% |
| !! | ATGTTGAAGACATAAAATAA+GGG | - | chr1.1:534164-534183 | None:intergenic | 20.0% |
| !! | GGTTAAATTAAATTATCACA+GGG | + | chr1.1:531861-531880 | MS.gene27084:intron | 20.0% |
| !! | GTCAAAATAAATACAATTTC+TGG | - | chr1.1:533664-533683 | None:intergenic | 20.0% |
| !! | TATCGTATACAATAATAAGT+AGG | + | chr1.1:531789-531808 | MS.gene27084:intron | 20.0% |
| !! | TATGTTGAAGACATAAAATA+AGG | - | chr1.1:534165-534184 | None:intergenic | 20.0% |
| !! | TGAATAGGTAAAATTGATTA+TGG | + | chr1.1:530142-530161 | MS.gene27084:intron | 20.0% |
| !! | TTTGGAAAATCTATTAAACT+TGG | + | chr1.1:533291-533310 | MS.gene27084:CDS | 20.0% |
| !!! | CTTAACTTGTAAAACTATTT+GGG | + | chr1.1:530693-530712 | MS.gene27084:intron | 20.0% |
| !!! | TCTTAAACAAATGTTCTTTT+TGG | + | chr1.1:532888-532907 | MS.gene27084:intron | 20.0% |
| !!! | TGTTTTAATGCTGTTTTAAT+GGG | + | chr1.1:530632-530651 | MS.gene27084:intron | 20.0% |
| !!! | TGTTTTAATGGGTTTATTTT+TGG | + | chr1.1:530643-530662 | MS.gene27084:intron | 20.0% |
| !!! | TTGATGATACTTATAATGTT+GGG | + | chr1.1:532572-532591 | MS.gene27084:intron | 20.0% |
| !!! | TTTTTTTCAATATATGCTAC+AGG | + | chr1.1:533703-533722 | MS.gene27084:intron | 20.0% |
| ! | AGATCATTTCCAAAATCAAT+AGG | - | chr1.1:531287-531306 | None:intergenic | 25.0% |
| ! | ATATCTTTATATGTTCCGTT+GGG | - | chr1.1:532536-532555 | None:intergenic | 25.0% |
| ! | ATTAAAACACCATCATTCTT+TGG | - | chr1.1:530621-530640 | None:intergenic | 25.0% |
| ! | CAAAATGTCTTTATCAGTAA+GGG | - | chr1.1:530480-530499 | None:intergenic | 25.0% |
| ! | CAATTCACTTTACAGTAATA+AGG | + | chr1.1:529986-530005 | MS.gene27084:CDS | 25.0% |
| ! | CCTATAAGAGTTAAATAACA+AGG | - | chr1.1:533387-533406 | None:intergenic | 25.0% |
| ! | GCTTATATGAACTTATCTAT+TGG | + | chr1.1:530670-530689 | MS.gene27084:intron | 25.0% |
| ! | GGGTTAAATTAAATTATCAC+AGG | + | chr1.1:531860-531879 | MS.gene27084:intron | 25.0% |
| ! | GTATAATTTAAGGATTCAGT+TGG | + | chr1.1:532184-532203 | MS.gene27084:intron | 25.0% |
| ! | TATTAAACTTGGTATCATTG+AGG | + | chr1.1:533302-533321 | MS.gene27084:CDS | 25.0% |
| ! | TCGTATACAATAATAAGTAG+GGG | + | chr1.1:531791-531810 | MS.gene27084:intron | 25.0% |
| ! | TCTGCATCAAAAGTTAAAAT+TGG | - | chr1.1:533213-533232 | None:intergenic | 25.0% |
| ! | TGAGAAACCATAAAAGAATT+AGG | - | chr1.1:533130-533149 | None:intergenic | 25.0% |
| ! | TGATGATACTTATAATGTTG+GGG | + | chr1.1:532573-532592 | MS.gene27084:intron | 25.0% |
| ! | TTGTTCATGCTTAAGAATAT+AGG | + | chr1.1:531633-531652 | MS.gene27084:intron | 25.0% |
| ! | TTTATGTCTTCAACATAGTT+GGG | + | chr1.1:534168-534187 | MS.gene27084:intron | 25.0% |
| !! | AAGGATATCTTTTACATAAC+TGG | + | chr1.1:533531-533550 | MS.gene27084:CDS | 25.0% |
| !! | AATTGATTTACATGTATGGT+TGG | - | chr1.1:530304-530323 | None:intergenic | 25.0% |
| !! | CAAGAATCCTAATTCTTTTA+TGG | + | chr1.1:533120-533139 | MS.gene27084:intron | 25.0% |
| !! | CTTACTGATAAAGACATTTT+GGG | + | chr1.1:530479-530498 | MS.gene27084:CDS | 25.0% |
| !! | CTTGATGATACTTATAATGT+TGG | + | chr1.1:532571-532590 | MS.gene27084:intron | 25.0% |
| !! | GGATTTTCAAAGTATATGTT+TGG | - | chr1.1:530368-530387 | None:intergenic | 25.0% |
| !! | GTAGAATTGATTTACATGTA+TGG | - | chr1.1:530308-530327 | None:intergenic | 25.0% |
| !! | TAATAAGGATATTTTCCTCA+GGG | + | chr1.1:530001-530020 | MS.gene27084:CDS | 25.0% |
| !! | TCAGGTATGTATATAGTTTT+GGG | + | chr1.1:530992-531011 | MS.gene27084:intron | 25.0% |
| !! | TTCAGGTATGTATATAGTTT+TGG | + | chr1.1:530991-531010 | MS.gene27084:intron | 25.0% |
| !! | TTTTATGTCTTCAACATAGT+TGG | + | chr1.1:534167-534186 | MS.gene27084:intron | 25.0% |
| !! | TTTTGATAAACGATTTCTGT+TGG | - | chr1.1:533334-533353 | None:intergenic | 25.0% |
| !!! | CAAGTTAGAATTGATTTTGA+CGG | + | chr1.1:530253-530272 | MS.gene27084:intron | 25.0% |
| !!! | CCTTGTTATTTAACTCTTAT+AGG | + | chr1.1:533384-533403 | MS.gene27084:intron | 25.0% |
| !!! | CTGTAGGTTTTTTAATGATA+AGG | + | chr1.1:530594-530613 | MS.gene27084:intron | 25.0% |
| !!! | GCTTAACTTGTAAAACTATT+TGG | + | chr1.1:530692-530711 | MS.gene27084:intron | 25.0% |
| !!! | GTGTTTTAATGCTGTTTTAA+TGG | + | chr1.1:530631-530650 | MS.gene27084:intron | 25.0% |
| !!! | TAATAACTTCTGTTTTTCAC+AGG | + | chr1.1:532037-532056 | MS.gene27084:intron | 25.0% |
| !!! | TACGCTTTTAGAATCAATTT+TGG | + | chr1.1:530325-530344 | MS.gene27084:intron | 25.0% |
| !!! | TGATTTTAAAATCAAGCAAC+TGG | - | chr1.1:531488-531507 | None:intergenic | 25.0% |
| !!! | TTCTTTATTTTTCACTGCAT+GGG | + | chr1.1:531540-531559 | MS.gene27084:intron | 25.0% |
| AAACTTCAGGAAACATAGTT+AGG | - | chr1.1:531913-531932 | None:intergenic | 30.0% | |
| AAGAATATAGGTGTTCTTGA+AGG | + | chr1.1:531645-531664 | MS.gene27084:intron | 30.0% | |
| AAGCTAACATGGAAAACTTA+TGG | - | chr1.1:530758-530777 | None:intergenic | 30.0% | |
| AATTTCTCTGCACATTTCAT+TGG | + | chr1.1:529544-529563 | MS.gene27084:intron | 30.0% | |
| ACAAGCTGAAAACATATAAG+CGG | - | chr1.1:530733-530752 | None:intergenic | 30.0% | |
| ACTATTTATGTGATACCCAA+CGG | + | chr1.1:532518-532537 | MS.gene27084:intron | 30.0% | |
| ACTCAAAAAGCTCAAATACT+TGG | - | chr1.1:532807-532826 | None:intergenic | 30.0% | |
| ATAAAGATATCCACTTCTCT+TGG | + | chr1.1:532546-532565 | MS.gene27084:intron | 30.0% | |
| ATTGAAATGTGTGTGAATGA+AGG | + | chr1.1:529871-529890 | MS.gene27084:intron | 30.0% | |
| ATTTCTCGTGATACATTCAA+TGG | - | chr1.1:532950-532969 | None:intergenic | 30.0% | |
| CCAAAATGTCTTTATCAGTA+AGG | - | chr1.1:530481-530500 | None:intergenic | 30.0% | |
| CGTATACAATAATAAGTAGG+GGG | + | chr1.1:531792-531811 | MS.gene27084:intron | 30.0% | |
| CTCAAAAAGCTCAAATACTT+GGG | - | chr1.1:532806-532825 | None:intergenic | 30.0% | |
| CTTAGAAGGTAAACTCTTAT+GGG | + | chr1.1:531840-531859 | MS.gene27084:intron | 30.0% | |
| GAAGTTAGAATGTAAAGCTT+TGG | - | chr1.1:530234-530253 | None:intergenic | 30.0% | |
| GATATCTTTATATGTTCCGT+TGG | - | chr1.1:532537-532556 | None:intergenic | 30.0% | |
| GATGCAGATTAAGTTAGATA+AGG | + | chr1.1:530877-530896 | MS.gene27084:intron | 30.0% | |
| GCTGATTGAAGAGTAAAATA+TGG | - | chr1.1:532288-532307 | None:intergenic | 30.0% | |
| GTTTCCTGAAGTTTAAAAGA+TGG | + | chr1.1:531919-531938 | MS.gene27084:intron | 30.0% | |
| TAAAATACACCTCAAAGAAG+AGG | + | chr1.1:531400-531419 | MS.gene27084:CDS | 30.0% | |
| TAAATGATGTGAAGGCTATA+TGG | + | chr1.1:532418-532437 | MS.gene27084:CDS | 30.0% | |
| TAACTTCCCTATCTATATCT+GGG | + | chr1.1:532088-532107 | MS.gene27084:CDS | 30.0% | |
| TCAAAAATTTCAAGCGAATG+CGG | + | chr1.1:529679-529698 | MS.gene27084:CDS | 30.0% | |
| TCTGAAGAAGAAAAACTTTG+AGG | + | chr1.1:533596-533615 | MS.gene27084:CDS | 30.0% | |
| TCTTATCTTCATAATCCATC+AGG | - | chr1.1:533772-533791 | None:intergenic | 30.0% | |
| TGACAAAGAAAAGAAAGGTA+TGG | + | chr1.1:533072-533091 | MS.gene27084:intron | 30.0% | |
| TTAAATTATCACAGGGTGAT+TGG | + | chr1.1:531868-531887 | MS.gene27084:intron | 30.0% | |
| TTAACTTCCCTATCTATATC+TGG | + | chr1.1:532087-532106 | MS.gene27084:CDS | 30.0% | |
| TTACGCACATTTCATTTCAA+TGG | + | chr1.1:529619-529638 | MS.gene27084:intron | 30.0% | |
| TTATAGCTTCTTTAACTCTC+TGG | + | chr1.1:531691-531710 | MS.gene27084:intron | 30.0% | |
| TTGAAATGTGTGTGAATGAA+GGG | + | chr1.1:529872-529891 | MS.gene27084:intron | 30.0% | |
| TTGCAATTTCAGAAGATACA+TGG | + | chr1.1:531348-531367 | MS.gene27084:CDS | 30.0% | |
| ! | AATTCTAGAAGCAAAATCCT+TGG | - | chr1.1:534303-534322 | None:intergenic | 30.0% |
| ! | AATTGGTCTATTGCTAAATC+TGG | + | chr1.1:532012-532031 | MS.gene27084:intron | 30.0% |
| ! | ATTCTAGAAGCAAAATCCTT+GGG | - | chr1.1:534302-534321 | None:intergenic | 30.0% |
| ! | CCTTACTGATAAAGACATTT+TGG | + | chr1.1:530478-530497 | MS.gene27084:CDS | 30.0% |
| ! | GAGGATTTGGTAAAGAATTT+GGG | + | chr1.1:530947-530966 | MS.gene27084:CDS | 30.0% |
| ! | GTAATAAGGATATTTTCCTC+AGG | + | chr1.1:530000-530019 | MS.gene27084:CDS | 30.0% |
| ! | GTTTTCACATAAGCTATAAG+TGG | - | chr1.1:530788-530807 | None:intergenic | 30.0% |
| ! | TACATATCTAGAATGAAAGC+TGG | + | chr1.1:533504-533523 | MS.gene27084:CDS | 30.0% |
| ! | TTAACAATGTAGCTGATTCT+TGG | + | chr1.1:533431-533450 | MS.gene27084:intron | 30.0% |
| ! | TTCTAAAGACAAGGAACTAA+AGG | + | chr1.1:533835-533854 | MS.gene27084:CDS | 30.0% |
| !! | ACAAATGTTCTTTTTGGCAT+TGG | + | chr1.1:532894-532913 | MS.gene27084:intron | 30.0% |
| !! | CAAATGTTCTTTTTGGCATT+GGG | + | chr1.1:532895-532914 | MS.gene27084:intron | 30.0% |
| !! | CTTGAAATTGCTTTTCTGAT+TGG | + | chr1.1:531227-531246 | MS.gene27084:intron | 30.0% |
| !! | GTTAATTAGTTTGTCTCTGT+AGG | + | chr1.1:530578-530597 | MS.gene27084:intron | 30.0% |
| !! | TTGGTGTGAAGGATTTTAAT+TGG | + | chr1.1:531045-531064 | MS.gene27084:intron | 30.0% |
| !!! | GTACGTTTTGAGTTTTGAAT+CGG | + | chr1.1:530090-530109 | MS.gene27084:intron | 30.0% |
| !!! | GTTCTTTATTTTTCACTGCA+TGG | + | chr1.1:531539-531558 | MS.gene27084:intron | 30.0% |
| !!! | TAATGGGTTTATTTTTGGAC+TGG | + | chr1.1:530648-530667 | MS.gene27084:intron | 30.0% |
| AACTTCCCTATCTATATCTG+GGG | + | chr1.1:532089-532108 | MS.gene27084:CDS | 35.0% | |
| AAGCTTACGGATCATATCAA+GGG | - | chr1.1:533026-533045 | None:intergenic | 35.0% | |
| AAGTTCTATATTGTAGGCAC+TGG | + | chr1.1:530436-530455 | MS.gene27084:intron | 35.0% | |
| AGTGCAAATTGTTGACATCT+AGG | - | chr1.1:531581-531600 | None:intergenic | 35.0% | |
| AGTGGTGATCTCAATCTAAT+TGG | + | chr1.1:531109-531128 | MS.gene27084:CDS | 35.0% | |
| AGTTTCAAGCTGAAGTTTCA+AGG | + | chr1.1:529946-529965 | MS.gene27084:CDS | 35.0% | |
| ATACTTGATGCAATACCTGA+TGG | + | chr1.1:533754-533773 | MS.gene27084:CDS | 35.0% | |
| ATCCTATCTATTAGAGACAG+AGG | + | chr1.1:530908-530927 | MS.gene27084:CDS | 35.0% | |
| CATTTCCAAAATCAATAGGC+TGG | - | chr1.1:531283-531302 | None:intergenic | 35.0% | |
| CCATAAGAGTTTACCTTCTA+AGG | - | chr1.1:531842-531861 | None:intergenic | 35.0% | |
| CCTTAGAAGGTAAACTCTTA+TGG | + | chr1.1:531839-531858 | MS.gene27084:intron | 35.0% | |
| CTCAATCTAATTGGGCAATT+TGG | + | chr1.1:531118-531137 | MS.gene27084:CDS | 35.0% | |
| CTTAAGCATGAACAAAGTGT+AGG | - | chr1.1:531628-531647 | None:intergenic | 35.0% | |
| GCATCAAGTATTCATCAACT+GGG | - | chr1.1:533745-533764 | None:intergenic | 35.0% | |
| GGAACTCTTAAATGATGTGA+AGG | + | chr1.1:532410-532429 | MS.gene27084:CDS | 35.0% | |
| GGGTATCACATAAATAGTGA+TGG | - | chr1.1:532516-532535 | None:intergenic | 35.0% | |
| GTAGTGGTGACATCAAAATT+TGG | + | chr1.1:533956-533975 | MS.gene27084:CDS | 35.0% | |
| GTGGTGATCTCAATCTAATT+GGG | + | chr1.1:531110-531129 | MS.gene27084:CDS | 35.0% | |
| TACCTCTGTCTCTAATAGAT+AGG | - | chr1.1:530913-530932 | None:intergenic | 35.0% | |
| TAGTGATGGCAATATTACCT+TGG | - | chr1.1:532502-532521 | None:intergenic | 35.0% | |
| TCCACTGACAAAGAAAAGAA+AGG | + | chr1.1:533067-533086 | MS.gene27084:CDS | 35.0% | |
| TCTAACATACAACTTCAGGT+TGG | - | chr1.1:532747-532766 | None:intergenic | 35.0% | |
| TGATAAACGATTTCTGTTGG+TGG | - | chr1.1:533331-533350 | None:intergenic | 35.0% | |
| TGATAAGGACCAAAGAATGA+TGG | + | chr1.1:530609-530628 | MS.gene27084:intron | 35.0% | |
| TGCATCAAGTATTCATCAAC+TGG | - | chr1.1:533746-533765 | None:intergenic | 35.0% | |
| TGCGGTGACAAAAATTGAAT+AGG | + | chr1.1:530127-530146 | MS.gene27084:intron | 35.0% | |
| TGGTGACATCAAAATTTGGT+TGG | + | chr1.1:533960-533979 | MS.gene27084:CDS | 35.0% | |
| TGTCTTTATCAGTAAGGGAT+AGG | - | chr1.1:530475-530494 | None:intergenic | 35.0% | |
| TTGGAAATGATCTGACTTTC+AGG | + | chr1.1:531294-531313 | MS.gene27084:intron | 35.0% | |
| TTTCTTGTTGAATGATCCCA+AGG | + | chr1.1:534283-534302 | MS.gene27084:CDS | 35.0% | |
| ! | AATGTTTGCCGTTTGTGATT+TGG | + | chr1.1:531026-531045 | MS.gene27084:intron | 35.0% |
| ! | ACCTTTCTTTTCTTTGTCAG+TGG | - | chr1.1:533071-533090 | None:intergenic | 35.0% |
| ! | ATAGCAAAATCTGGAACTTC+AGG | + | chr1.1:530974-530993 | MS.gene27084:CDS | 35.0% |
| ! | ATCGACATTGTCATTTGCAA+GGG | - | chr1.1:533897-533916 | None:intergenic | 35.0% |
| ! | ATCTGACTTTCAGGTATGTA+TGG | + | chr1.1:531303-531322 | MS.gene27084:intron | 35.0% |
| ! | ATTTTCCAGTTGTTCTTTGC+TGG | - | chr1.1:533559-533578 | None:intergenic | 35.0% |
| ! | CAAATTTAGAACGTACCTCA+GGG | - | chr1.1:534126-534145 | None:intergenic | 35.0% |
| ! | CTTTTCTGATTGGTATGTTG+TGG | + | chr1.1:531237-531256 | MS.gene27084:intron | 35.0% |
| ! | GGAGGATTTGGTAAAGAATT+TGG | + | chr1.1:530946-530965 | MS.gene27084:CDS | 35.0% |
| ! | GTGGTTTTCATAAGCTAACA+TGG | - | chr1.1:530769-530788 | None:intergenic | 35.0% |
| ! | TCAAATTTAGAACGTACCTC+AGG | - | chr1.1:534127-534146 | None:intergenic | 35.0% |
| ! | TCTATTAGAGACAGAGGTAT+TGG | + | chr1.1:530914-530933 | MS.gene27084:CDS | 35.0% |
| ! | TCTGACTTTCAGGTATGTAT+GGG | + | chr1.1:531304-531323 | MS.gene27084:intron | 35.0% |
| ! | TCTGCCATCTTTTAAACTTC+AGG | - | chr1.1:531926-531945 | None:intergenic | 35.0% |
| ! | TGAAGTTCCAGATTTTGCTA+TGG | - | chr1.1:530975-530994 | None:intergenic | 35.0% |
| ! | TGGTATGTTGTGGATGTTTT+TGG | + | chr1.1:531247-531266 | MS.gene27084:intron | 35.0% |
| ! | TTCAACATAGTTGGGCTTTT+TGG | + | chr1.1:534176-534195 | MS.gene27084:intron | 35.0% |
| !! | ACTCAATTGGCTTACTTTTC+AGG | + | chr1.1:534202-534221 | MS.gene27084:intron | 35.0% |
| !! | CTTCTGTTTTTCACAGGAAT+TGG | + | chr1.1:532043-532062 | MS.gene27084:intron | 35.0% |
| !! | GATAAAGACATTTTGGGTGA+AGG | + | chr1.1:530485-530504 | MS.gene27084:CDS | 35.0% |
| !!! | GGCTTTTTGGTTTACTCAAT+TGG | + | chr1.1:534189-534208 | MS.gene27084:intron | 35.0% |
| !!! | TCCTTCACTGTCTTTGTTTT+AGG | - | chr1.1:532375-532394 | None:intergenic | 35.0% |
| !!! | TTATGCCAGCCTATTGATTT+TGG | + | chr1.1:531275-531294 | MS.gene27084:intron | 35.0% |
| AAAAAGCAAGCATACATGCG+CGG | + | chr1.1:534031-534050 | MS.gene27084:CDS | 40.0% | |
| AAAGTCAGTGAAGGGAATTC+AGG | - | chr1.1:533181-533200 | None:intergenic | 40.0% | |
| AAATTTCAAGCGAATGCGGA+AGG | + | chr1.1:529683-529702 | MS.gene27084:CDS | 40.0% | |
| AAGAGAGAGAAGAAGAAGAG+TGG | - | chr1.1:529446-529465 | None:intergenic | 40.0% | |
| AAGAGTAGTTAAGAACCCTG+AGG | + | chr1.1:534108-534127 | MS.gene27084:CDS | 40.0% | |
| ACAAACCTGGATTTCAAGCT+TGG | - | chr1.1:530519-530538 | None:intergenic | 40.0% | |
| AGAAGCGAAAAGTCAGTGAA+GGG | - | chr1.1:533189-533208 | None:intergenic | 40.0% | |
| AGCTGAAGTTTCAAGGCTTA+TGG | + | chr1.1:529953-529972 | MS.gene27084:CDS | 40.0% | |
| AGGTATGGTGTAATGACTGT+TGG | + | chr1.1:533087-533106 | MS.gene27084:intron | 40.0% | |
| ATATTACCTTGGCAAGAGAG+TGG | - | chr1.1:532491-532510 | None:intergenic | 40.0% | |
| ATTTACAGCACCAAGTCTGA+GGG | + | chr1.1:533459-533478 | MS.gene27084:intron | 40.0% | |
| ATTTGGTTGGAGTGCAAACA+TGG | + | chr1.1:533973-533992 | MS.gene27084:CDS | 40.0% | |
| CAAGCTTACGGATCATATCA+AGG | - | chr1.1:533027-533046 | None:intergenic | 40.0% | |
| CCAAAGGTGGAAGAAAAACT+CGG | + | chr1.1:529731-529750 | MS.gene27084:CDS | 40.0% | |
| CCACTTAGTTAGATCCTTGA+AGG | - | chr1.1:533864-533883 | None:intergenic | 40.0% | |
| CCTCTTGACAACATCTGAAT+CGG | - | chr1.1:529780-529799 | None:intergenic | 40.0% | |
| CCTTCAAGGATCTAACTAAG+TGG | + | chr1.1:533861-533880 | MS.gene27084:CDS | 40.0% | |
| CCTTCACACCAAATCACAAA+CGG | - | chr1.1:531037-531056 | None:intergenic | 40.0% | |
| CGCACATTTCATTTCAATGG+TGG | + | chr1.1:529622-529641 | MS.gene27084:intron | 40.0% | |
| CGCTCGCTTACATTTGAAAA+GGG | - | chr1.1:533154-533173 | None:intergenic | 40.0% | |
| CTCGTCTAACATACAACTTC+AGG | - | chr1.1:532751-532770 | None:intergenic | 40.0% | |
| GAAGTTCCAAAATGTGTCCA+AGG | + | chr1.1:533790-533809 | MS.gene27084:CDS | 40.0% | |
| GATACATGGAATGAACCACT+AGG | + | chr1.1:531362-531381 | MS.gene27084:CDS | 40.0% | |
| GCCTAAAACAAAGACAGTGA+AGG | + | chr1.1:532371-532390 | MS.gene27084:CDS | 40.0% | |
| GCGATGACAAACCTTTATCA+TGG | + | chr1.1:532618-532637 | MS.gene27084:CDS | 40.0% | |
| GGAACTAAAGGAATCCTTCA+AGG | + | chr1.1:533847-533866 | MS.gene27084:CDS | 40.0% | |
| GGTATGGTGTAATGACTGTT+GGG | + | chr1.1:533088-533107 | MS.gene27084:intron | 40.0% | |
| GGTTCTTAACTACTCTTTCC+CGG | - | chr1.1:534105-534124 | None:intergenic | 40.0% | |
| GTAAAGTGGCTCCATGATAA+AGG | - | chr1.1:532632-532651 | None:intergenic | 40.0% | |
| GTTGAGAAAATGCAGACAAG+TGG | + | chr1.1:531091-531110 | MS.gene27084:CDS | 40.0% | |
| TAGAAGCGAAAAGTCAGTGA+AGG | - | chr1.1:533190-533209 | None:intergenic | 40.0% | |
| TAGAATGAAAGCTGGACAGA+AGG | + | chr1.1:533512-533531 | MS.gene27084:CDS | 40.0% | |
| TATATGGCTGAGGAATCCAA+AGG | + | chr1.1:532434-532453 | MS.gene27084:CDS | 40.0% | |
| TATTTACAGCACCAAGTCTG+AGG | + | chr1.1:533458-533477 | MS.gene27084:intron | 40.0% | |
| TCAAGGATCTAACTAAGTGG+TGG | + | chr1.1:533864-533883 | MS.gene27084:CDS | 40.0% | |
| TCATCTTCACTTTCCTCCTT+GGG | - | chr1.1:532318-532337 | None:intergenic | 40.0% | |
| TCCAAACTCATTCCAGAACT+TGG | - | chr1.1:533277-533296 | None:intergenic | 40.0% | |
| TCTCTTCTCATCAACATCAG+AGG | - | chr1.1:533244-533263 | None:intergenic | 40.0% | |
| TGAAGTAGTAGATCCACCAA+AGG | + | chr1.1:529715-529734 | MS.gene27084:CDS | 40.0% | |
| TGCTTCCCCAGATATAGATA+GGG | - | chr1.1:532097-532116 | None:intergenic | 40.0% | |
| TGGAGTATGCATACCTTAGA+AGG | + | chr1.1:531826-531845 | MS.gene27084:intron | 40.0% | |
| TGGTATGACAAAGGAGGATT+TGG | + | chr1.1:530934-530953 | MS.gene27084:CDS | 40.0% | |
| TGTCAATTTACCCTCAGACT+TGG | - | chr1.1:533472-533491 | None:intergenic | 40.0% | |
| TGTGAAGATATCCAACCGAT+TGG | + | chr1.1:533919-533938 | MS.gene27084:CDS | 40.0% | |
| TGTGTGTGAATGAAGGGAAT+CGG | + | chr1.1:529878-529897 | MS.gene27084:intron | 40.0% | |
| TTCATCTTCACTTTCCTCCT+TGG | - | chr1.1:532319-532338 | None:intergenic | 40.0% | |
| TTCCAAAATGTGTCCAAGGA+GGG | + | chr1.1:533794-533813 | MS.gene27084:CDS | 40.0% | |
| TTGCTTCCCCAGATATAGAT+AGG | - | chr1.1:532098-532117 | None:intergenic | 40.0% | |
| TTGGGTACCATAGCAAAATC+TGG | + | chr1.1:530965-530984 | MS.gene27084:CDS | 40.0% | |
| TTTGATGTCACCACTACACA+AGG | - | chr1.1:533953-533972 | None:intergenic | 40.0% | |
| ! | AAATGACGATGGTGATGTCA+AGG | + | chr1.1:534451-534470 | MS.gene27084:CDS | 40.0% |
| ! | AGTTTTTCTTCCACCTTTGG+TGG | - | chr1.1:529731-529750 | None:intergenic | 40.0% |
| ! | CATCGACATTGTCATTTGCA+AGG | - | chr1.1:533898-533917 | None:intergenic | 40.0% |
| ! | CATTTGAAATCAGTTCCCTG+AGG | - | chr1.1:530019-530038 | None:intergenic | 40.0% |
| ! | CCTTTTCAAATGTAAGCGAG+CGG | + | chr1.1:533152-533171 | MS.gene27084:intron | 40.0% |
| ! | CTAATTGGGCAATTTGGAGT+TGG | + | chr1.1:531124-531143 | MS.gene27084:CDS | 40.0% |
| ! | GCAAAGTGTCAGAATCAACA+AGG | - | chr1.1:532928-532947 | None:intergenic | 40.0% |
| ! | GTATGGGAATCTAAAGCTGA+TGG | + | chr1.1:531320-531339 | MS.gene27084:CDS | 40.0% |
| ! | TCTGATGTTGATGAGAAGAG+AGG | + | chr1.1:533243-533262 | MS.gene27084:CDS | 40.0% |
| ! | TGGTGGATCTACTACTTCAT+CGG | - | chr1.1:529714-529733 | None:intergenic | 40.0% |
| ! | TTTTCTTCTTCAGACGCTCA+AGG | - | chr1.1:533590-533609 | None:intergenic | 40.0% |
| !! | ACCAAGTTCTGGAATGAGTT+TGG | + | chr1.1:533273-533292 | MS.gene27084:CDS | 40.0% |
| !! | AGGTATTGGTATGACAAAGG+AGG | + | chr1.1:530928-530947 | MS.gene27084:CDS | 40.0% |
| !! | CACAAGGAGTGTTATCCAAT+CGG | - | chr1.1:533937-533956 | None:intergenic | 40.0% |
| !! | CAGAGGTATTGGTATGACAA+AGG | + | chr1.1:530925-530944 | MS.gene27084:CDS | 40.0% |
| !! | TCTTTTTGGCATTGGGAACA+GGG | + | chr1.1:532902-532921 | MS.gene27084:intron | 40.0% |
| !! | TTCTTTTTGGCATTGGGAAC+AGG | + | chr1.1:532901-532920 | MS.gene27084:intron | 40.0% |
| ACCCTATCATCAAGGAACTC+CGG | + | chr1.1:534083-534102 | MS.gene27084:CDS | 45.0% | |
| AGTAGTAGATCCACCAAAGG+TGG | + | chr1.1:529718-529737 | MS.gene27084:CDS | 45.0% | |
| ATGTGAAGGCTATATGGCTG+AGG | + | chr1.1:532424-532443 | MS.gene27084:CDS | 45.0% | |
| ATTCTACCACTCTCTTGCCA+AGG | + | chr1.1:532482-532501 | MS.gene27084:CDS | 45.0% | |
| CATCACCTTCAGCAGTAAAG+TGG | - | chr1.1:532646-532665 | None:intergenic | 45.0% | |
| CATCTTCACTTTCCTCCTTG+GGG | - | chr1.1:532317-532336 | None:intergenic | 45.0% | |
| CCGATTCAGATGTTGTCAAG+AGG | + | chr1.1:529777-529796 | MS.gene27084:CDS | 45.0% | |
| CCGCTCGCTTACATTTGAAA+AGG | - | chr1.1:533155-533174 | None:intergenic | 45.0% | |
| CTATATCTGGGGAAGCAAAG+AGG | + | chr1.1:532100-532119 | MS.gene27084:CDS | 45.0% | |
| CTTCTTCTTCTCGCAGATCA+AGG | + | chr1.1:529466-529485 | MS.gene27084:CDS | 45.0% | |
| GAAGGAAACGACTTACGAGT+GGG | + | chr1.1:532389-532408 | MS.gene27084:CDS | 45.0% | |
| GAATCCAAAGGAGGTTACAG+AGG | + | chr1.1:532446-532465 | MS.gene27084:CDS | 45.0% | |
| GAATCGGTTGAAAGTCCATG+AGG | - | chr1.1:529764-529783 | None:intergenic | 45.0% | |
| GAGAGAAGAAGAAGAGTGGA+AGG | - | chr1.1:529442-529461 | None:intergenic | 45.0% | |
| GAGGTCAATACACCAAGTTC+TGG | + | chr1.1:533262-533281 | MS.gene27084:CDS | 45.0% | |
| GCTGATGAGGTAAATGACGA+TGG | + | chr1.1:534440-534459 | MS.gene27084:CDS | 45.0% | |
| GGAAGATGAGACTGAAGTTG+AGG | + | chr1.1:534376-534395 | MS.gene27084:CDS | 45.0% | |
| GGATAACACTCCTTGTGTAG+TGG | + | chr1.1:533940-533959 | MS.gene27084:CDS | 45.0% | |
| GTTCCAAAATGTGTCCAAGG+AGG | + | chr1.1:533793-533812 | MS.gene27084:CDS | 45.0% | |
| TAACTCTCGTACAAGTCCTG+AGG | - | chr1.1:532707-532726 | None:intergenic | 45.0% | |
| TCATCAAGCTCCAAGAGAAG+TGG | - | chr1.1:532559-532578 | None:intergenic | 45.0% | |
| TCCTAGACACCCTATCATCA+AGG | + | chr1.1:534075-534094 | MS.gene27084:CDS | 45.0% | |
| TCTTCCTCTGTAACCTCCTT+TGG | - | chr1.1:532453-532472 | None:intergenic | 45.0% | |
| TGAAGGAAACGACTTACGAG+TGG | + | chr1.1:532388-532407 | MS.gene27084:CDS | 45.0% | |
| TGCTTCAAACGAAGCTGATG+AGG | + | chr1.1:534427-534446 | MS.gene27084:CDS | 45.0% | |
| TGGAACCAGCAAAGAACAAC+TGG | + | chr1.1:533551-533570 | MS.gene27084:CDS | 45.0% | |
| TTCTTCAGACGCTCAAGGAA+TGG | - | chr1.1:533585-533604 | None:intergenic | 45.0% | |
| ! | AGTAGGGGGTAGTGTTTCTA+TGG | + | chr1.1:531806-531825 | MS.gene27084:intron | 45.0% |
| ! | ATGTTTGGTTCCACTTCGAG+AGG | - | chr1.1:530353-530372 | None:intergenic | 45.0% |
| ! | CACTTTCGAAAAGTGCAGTC+TGG | - | chr1.1:534262-534281 | None:intergenic | 45.0% |
| ! | CAGACTGCACTTTTCGAAAG+TGG | + | chr1.1:534260-534279 | MS.gene27084:CDS | 45.0% |
| ! | CCGAGTTTTTCTTCCACCTT+TGG | - | chr1.1:529734-529753 | None:intergenic | 45.0% |
| ! | CGGGAAGGATTCTAAAGACA+AGG | + | chr1.1:533826-533845 | MS.gene27084:CDS | 45.0% |
| ! | GGATGAGAGTGTGAAGCAAA+CGG | + | chr1.1:534223-534242 | MS.gene27084:intron | 45.0% |
| ! | GTGCTTTAGGTGGCACATAA+AGG | - | chr1.1:532685-532704 | None:intergenic | 45.0% |
| ! | GTTGGGGATTTGTGTTTTGC+AGG | + | chr1.1:532589-532608 | MS.gene27084:intron | 45.0% |
| ! | TACAAGTCCTGAGGTGCTTT+AGG | - | chr1.1:532698-532717 | None:intergenic | 45.0% |
| ! | TCATCAGCTTCGTTTGAAGC+AGG | - | chr1.1:534428-534447 | None:intergenic | 45.0% |
| ! | TCCTTGATGATAGGGTGTCT+AGG | - | chr1.1:534079-534098 | None:intergenic | 45.0% |
| !! | AAGCAAAGAGGTTGATGTGG+AGG | + | chr1.1:532112-532131 | MS.gene27084:CDS | 45.0% |
| !! | AGGAGTGTTATCCAATCGGT+TGG | - | chr1.1:533933-533952 | None:intergenic | 45.0% |
| !! | CCGTTTGTGATTTGGTGTGA+AGG | + | chr1.1:531034-531053 | MS.gene27084:intron | 45.0% |
| !! | TCGGTGTGTGTTTAGTTCTG+CGG | + | chr1.1:530109-530128 | MS.gene27084:intron | 45.0% |
| !! | TGTAGGCACTGGACAAGATT+AGG | + | chr1.1:530447-530466 | MS.gene27084:intron | 45.0% |
| !!! | AATTTTGGCTCCTCTCGAAG+TGG | + | chr1.1:530340-530359 | MS.gene27084:intron | 45.0% |
| ACTTCTCCGCATTACTGCGA+AGG | - | chr1.1:529923-529942 | None:intergenic | 50.0% | |
| AGACTCGTCGTCTTCATCAG+CGG | - | chr1.1:532141-532160 | None:intergenic | 50.0% | |
| ATACTCTTCCACGTACTCGC+TGG | - | chr1.1:531426-531445 | None:intergenic | 50.0% | |
| ATCTCTGTTCCACGTCCTAG+TGG | - | chr1.1:531380-531399 | None:intergenic | 50.0% | |
| ATGGCTGAGGAATCCAAAGG+AGG | + | chr1.1:532437-532456 | MS.gene27084:CDS | 50.0% | |
| CAACGCCAAGCTTGAAATCC+AGG | + | chr1.1:530511-530530 | MS.gene27084:CDS | 50.0% | |
| CAGTCCTGATGCAACAGTTG+AGG | + | chr1.1:534352-534371 | MS.gene27084:CDS | 50.0% | |
| CCCTATCATCAAGGAACTCC+GGG | + | chr1.1:534084-534103 | MS.gene27084:CDS | 50.0% | |
| CTTCTCCGCATTACTGCGAA+GGG | - | chr1.1:529922-529941 | None:intergenic | 50.0% | |
| GAGATCCCTTCGCAGTAATG+CGG | + | chr1.1:529914-529933 | MS.gene27084:CDS | 50.0% | |
| TCAATCAGCTGAAAGCCCCA+AGG | + | chr1.1:532299-532318 | MS.gene27084:intron | 50.0% | |
| TCCTCCTCAACTGTTGCATC+AGG | - | chr1.1:534359-534378 | None:intergenic | 50.0% | |
| TCCTGATGCAACAGTTGAGG+AGG | + | chr1.1:534355-534374 | MS.gene27084:CDS | 50.0% | |
| TGAAGACGACGAGTCTTCTG+AGG | + | chr1.1:532145-532164 | MS.gene27084:CDS | 50.0% | |
| TGGAATGAACCACTAGGACG+TGG | + | chr1.1:531368-531387 | MS.gene27084:CDS | 50.0% | |
| ! | AAGTCCTGAGGTGCTTTAGG+TGG | - | chr1.1:532695-532714 | None:intergenic | 50.0% |
| ! | CCCGGAGTTCCTTGATGATA+GGG | - | chr1.1:534087-534106 | None:intergenic | 50.0% |
| ! | CTTTGTCAGTGGACTCGTCA+GGG | - | chr1.1:533060-533079 | None:intergenic | 50.0% |
| ! | GACCCTCCTTGGACACATTT+TGG | - | chr1.1:533799-533818 | None:intergenic | 50.0% |
| ! | TCCAAGGAGGGTCTGAAACT+CGG | + | chr1.1:533806-533825 | MS.gene27084:CDS | 50.0% |
| ! | TCCCGGAGTTCCTTGATGAT+AGG | - | chr1.1:534088-534107 | None:intergenic | 50.0% |
| ! | TCTTTGTCAGTGGACTCGTC+AGG | - | chr1.1:533061-533080 | None:intergenic | 50.0% |
| ! | TGGAGCCACTTTACTGCTGA+AGG | + | chr1.1:532638-532657 | MS.gene27084:CDS | 50.0% |
| !! | AAACTCGGTGCTGTTCCTCA+TGG | + | chr1.1:529746-529765 | MS.gene27084:CDS | 50.0% |
| !! | GGGAAGCAAAGAGGTTGATG+TGG | + | chr1.1:532109-532128 | MS.gene27084:CDS | 50.0% |
| AAGCATACATGCGCGGCAAG+AGG | + | chr1.1:534038-534057 | MS.gene27084:CDS | 55.0% | |
| AGCATACATGCGCGGCAAGA+GGG | + | chr1.1:534039-534058 | MS.gene27084:CDS | 55.0% | |
| ATCAGCTGAAAGCCCCAAGG+AGG | + | chr1.1:532302-532321 | MS.gene27084:intron | 55.0% | |
| GACTCGTCGTCTTCATCAGC+GGG | - | chr1.1:532140-532159 | None:intergenic | 55.0% | |
| GATCCGTAAGCTTGCCGAAG+AGG | + | chr1.1:533033-533052 | MS.gene27084:CDS | 55.0% | |
| GGTCCTCTTCGGCAAGCTTA+CGG | - | chr1.1:533039-533058 | None:intergenic | 55.0% | |
| ! | ACTCGCTGGCCTCTTCTTTG+AGG | - | chr1.1:531412-531431 | None:intergenic | 55.0% |
| ! | CCAAGGAGGGTCTGAAACTC+GGG | + | chr1.1:533807-533826 | MS.gene27084:CDS | 55.0% |
| ! | CGACGAGTCTTCTGAGGAAG+AGG | + | chr1.1:532151-532170 | MS.gene27084:CDS | 55.0% |
| ! | TGTGCCACCTAAAGCACCTC+AGG | + | chr1.1:532688-532707 | MS.gene27084:CDS | 55.0% |
| AGAAGAGGCCAGCGAGTACG+TGG | + | chr1.1:531415-531434 | MS.gene27084:CDS | 60.0% | |
| CCCGAGTTTCAGACCCTCCT+TGG | - | chr1.1:533810-533829 | None:intergenic | 60.0% | |
| GGACTCGTCAGGGTCCTCTT+CGG | - | chr1.1:533050-533069 | None:intergenic | 60.0% | |
| ! | GGAGGGTCTGAAACTCGGGA+AGG | + | chr1.1:533811-533830 | MS.gene27084:CDS | 60.0% |
| CTGGCGTGCGTGCGTGCATA+AGG | + | chr1.1:531710-531729 | MS.gene27084:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 529421 | 534484 | 529421 | ID=MS.gene27084 |
| chr1.1 | mRNA | 529421 | 534484 | 529421 | ID=MS.gene27084.t1;Parent=MS.gene27084 |
| chr1.1 | exon | 529421 | 529487 | 529421 | ID=MS.gene27084.t1.exon1;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 529421 | 529487 | 529421 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 529678 | 529798 | 529678 | ID=MS.gene27084.t1.exon2;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 529678 | 529798 | 529678 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 529893 | 530046 | 529893 | ID=MS.gene27084.t1.exon3;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 529893 | 530046 | 529893 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 530452 | 530532 | 530452 | ID=MS.gene27084.t1.exon4;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 530452 | 530532 | 530452 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 530884 | 530995 | 530884 | ID=MS.gene27084.t1.exon5;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 530884 | 530995 | 530884 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 531086 | 531212 | 531086 | ID=MS.gene27084.t1.exon6;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 531086 | 531212 | 531086 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 531316 | 531454 | 531316 | ID=MS.gene27084.t1.exon7;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 531316 | 531454 | 531316 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 532059 | 532179 | 532059 | ID=MS.gene27084.t1.exon8;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 532059 | 532179 | 532059 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 532307 | 532503 | 532307 | ID=MS.gene27084.t1.exon9;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 532307 | 532503 | 532307 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 532611 | 532826 | 532611 | ID=MS.gene27084.t1.exon10;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 532611 | 532826 | 532611 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 532923 | 533088 | 532923 | ID=MS.gene27084.t1.exon11;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 532923 | 533088 | 532923 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 533232 | 533370 | 533232 | ID=MS.gene27084.t1.exon12;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 533232 | 533370 | 533232 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 533467 | 533617 | 533467 | ID=MS.gene27084.t1.exon13;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 533467 | 533617 | 533467 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 533725 | 534129 | 533725 | ID=MS.gene27084.t1.exon14;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 533725 | 534129 | 533725 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| chr1.1 | exon | 534224 | 534484 | 534224 | ID=MS.gene27084.t1.exon15;Parent=MS.gene27084.t1 |
| chr1.1 | CDS | 534224 | 534484 | 534224 | ID=cds.MS.gene27084.t1;Parent=MS.gene27084.t1 |
| Gene Sequence |
| Protein sequence |
