AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024538


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024538.t1 MTR_7g115610 98.617 723 9 1 1 723 1 722 0.0 1476
MS.gene024538.t1 MTR_6g023790 76.087 138 25 3 581 715 130 262 4.70e-60 203
MS.gene024538.t1 MTR_6g023790 61.194 67 16 1 1 67 90 146 1.49e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024538.t1 AT2G34970 62.983 724 247 7 1 714 1 713 0.0 915
MS.gene024538.t1 AT4G18300 58.564 724 267 13 1 714 1 701 0.0 819
MS.gene024538.t1 AT3G02270 55.556 729 260 14 1 719 1 675 0.0 753

Find 146 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGCCTCCTTCACATTT+TGG 0.127019 7.2:-1979801 None:intergenic
GTACCAGATGTTATGAATTT+TGG 0.128972 7.2:+1976198 MS.gene024538:CDS
CTTCGTGTTCTTGCCAATTT+TGG 0.166436 7.2:-1976641 None:intergenic
AAGATACTCACTTGAATTAA+TGG 0.203717 7.2:-1982813 None:intergenic
GGAAGTATTCTTCCACCTTC+TGG 0.225473 7.2:+1979918 MS.gene024538:CDS
TATTACTGAAGATAAAATTT+TGG 0.227298 7.2:+1979851 MS.gene024538:CDS
AGAAACTGCTTCTGAATTAT+TGG 0.228648 7.2:+1978813 MS.gene024538:CDS
GCTTGTTCGTGTTCCGTTAC+AGG 0.244182 7.2:+1971831 MS.gene024538:CDS
GAAGCAGGTGATTAACTATT+TGG 0.248892 7.2:+1973211 MS.gene024538:CDS
ATAGGATCTGGCACCAAAAT+TGG 0.250898 7.2:+1976628 MS.gene024538:CDS
GTTGGCCCATTCTCTGTTAT+AGG 0.251239 7.2:+1976610 MS.gene024538:CDS
ATAGTTGTTACAGTAAAATT+AGG 0.269459 7.2:-1973257 None:intergenic
AGTCAAAATTGTCTGTAAAT+AGG 0.286591 7.2:-1975573 None:intergenic
TTATATTTCTTTCAGATAAT+GGG 0.293378 7.2:+1976063 MS.gene024538:intron
TTCGTCTTCATCGTCTTCTT+CGG 0.298425 7.2:-1982964 None:intergenic
TGTACTTACCAAGTGGAAAA+AGG 0.300815 7.2:+1981766 MS.gene024538:CDS
TACAAAAGTTGCTTGGTATT+AGG 0.305309 7.2:-1974977 None:intergenic
AGTAGAGATACTTGTGAATA+AGG 0.319455 7.2:-1977304 None:intergenic
AAAGCTCACCAGCTGAACTA+TGG 0.322453 7.2:-1980999 None:intergenic
AAAATTTGAAGAAATGTGTT+TGG 0.336103 7.2:+1982084 MS.gene024538:CDS
TTGGTGGGGCTGGTTATGTT+TGG 0.339452 7.2:+1979778 MS.gene024538:CDS
TCGTCTTCATCGTCTTCTTC+GGG 0.349579 7.2:-1982963 None:intergenic
TCATGTTTCCAGGTTGTAGT+TGG 0.360879 7.2:+1977262 MS.gene024538:intron
TCATCGTCATCTGAATCATT+AGG 0.362858 7.2:-1979957 None:intergenic
ACATAGAGGGATGCTATATA+TGG 0.363209 7.2:+1976713 MS.gene024538:CDS
CCATTCTCTGTTATAGGATC+TGG 0.364215 7.2:+1976616 MS.gene024538:CDS
AAGTTCACAGCCATCTTCTA+TGG 0.377775 7.2:-1976746 None:intergenic
GAAGTATTCTTCCACCTTCT+GGG 0.385133 7.2:+1979919 MS.gene024538:CDS
GTCAATGTGTAATTTATCAT+TGG 0.388585 7.2:-1973134 None:intergenic
GTCGGAGTAGGATGCAAAAT+CGG 0.392986 7.2:+1976679 MS.gene024538:CDS
GTAAATAGGCTAAGGACTTC+CGG 0.402526 7.2:-1975559 None:intergenic
GAAAGCTATGGAAGATGAAC+TGG 0.408041 7.2:+1979881 MS.gene024538:CDS
CCGGAACAAACCTCTGAAGC+AGG 0.410804 7.2:-1978850 None:intergenic
TCATCTGAATCATTAGGATT+AGG 0.423207 7.2:-1979951 None:intergenic
CTGCTGTGCTCATGCGAAGC+AGG 0.446859 7.2:+1973196 MS.gene024538:CDS
CATGTTTCCAGGTTGTAGTT+GGG 0.449794 7.2:+1977263 MS.gene024538:intron
TTGCCAAAATTCATAACATC+TGG 0.452105 7.2:-1976201 None:intergenic
CAAGCACAATCAGCTGTTGT+TGG 0.455052 7.2:+1976592 MS.gene024538:CDS
TCGTCGCTATCTTCCTCAAC+CGG 0.456281 7.2:-1977334 None:intergenic
CCAGATCCTATAACAGAGAA+TGG 0.458173 7.2:-1976616 None:intergenic
CTCTCTGCACCATGACAAGC+AGG 0.458401 7.2:+1975075 MS.gene024538:CDS
TCGGAGTAGGATGCAAAATC+GGG 0.464129 7.2:+1976680 MS.gene024538:CDS
CTTGAATTAATGGTTGAGCT+TGG 0.472089 7.2:-1982803 None:intergenic
AATTGACTTCTAAAGTCAAA+TGG 0.473008 7.2:-1980137 None:intergenic
TAATGACCATGGTTATTAAA+CGG 0.473067 7.2:+1974888 MS.gene024538:CDS
TTTCCAGGTTGTAGTTGGGC+AGG 0.474402 7.2:+1977267 MS.gene024538:intron
GCAAGGATATAATTCATAGA+TGG 0.481776 7.2:+1976163 MS.gene024538:CDS
AAGCTCACCAGCTGAACTAT+GGG 0.483922 7.2:-1980998 None:intergenic
TCTACTACAGCAGCCGGTTG+AGG 0.489304 7.2:+1977321 MS.gene024538:CDS
TATGAAATCAGGATCTGCTC+TGG 0.490344 7.2:+1976798 MS.gene024538:CDS
TTTGGAGGCAATGAAAGCTA+TGG 0.494317 7.2:+1979869 MS.gene024538:CDS
GACTTGCCCCATAGTTCAGC+TGG 0.494761 7.2:+1980991 MS.gene024538:CDS
TTAAATTCCGTCGTCGGAGT+AGG 0.496201 7.2:+1976667 MS.gene024538:CDS
TGAGAAGAAAGGCGCGGATG+AGG 0.496216 7.2:+1982761 MS.gene024538:CDS
GATAAAGCAGACTTCTCAAA+AGG 0.505881 7.2:+1975007 MS.gene024538:CDS
AAGATAGCTGCTGATTGTGC+TGG 0.506462 7.2:+1980934 MS.gene024538:CDS
TTGGGGCGTTCAAGAGTGAT+AGG 0.508515 7.2:-1971892 None:intergenic
CAAGGAATATACCGTGGCTC+GGG 0.510114 7.2:+1976246 MS.gene024538:CDS
TTACAGTATCTCCACTGATA+AGG 0.511096 7.2:-1974799 None:intergenic
CTTATCCACTGTGCTGGTGA+TGG 0.511806 7.2:-1978782 None:intergenic
TCAGGATCTGCTCTGGAACC+TGG 0.517246 7.2:+1976805 MS.gene024538:CDS
CTCGTAATACAAAAGTTGCT+TGG 0.522774 7.2:-1974984 None:intergenic
TCCGTTACAGGCGATTCTGT+TGG 0.523711 7.2:+1971843 MS.gene024538:CDS
AAGAGATGACTTTGACAAAG+AGG 0.524902 7.2:+1979992 MS.gene024538:CDS
TTTGCATCCTACTCCGACGA+CGG 0.525897 7.2:-1976674 None:intergenic
TAGAAGATGGCTGTGAACTT+AGG 0.527350 7.2:+1976749 MS.gene024538:CDS
AGTTGGGAAGATGAGAAGAA+AGG 0.528430 7.2:+1982750 MS.gene024538:CDS
ATCTGACTTATCCACTGTGC+TGG 0.528457 7.2:-1978788 None:intergenic
CGGTACCAAGTCGAGACTGA+TGG 0.534696 7.2:-1974931 None:intergenic
AGTCGAGACTGATGGATAGC+TGG 0.535756 7.2:-1974923 None:intergenic
CATAGAGGGATGCTATATAT+GGG 0.540737 7.2:+1976714 MS.gene024538:CDS
CACCGAAGAAAAGCGCTGCT+AGG 0.545842 7.2:+1971788 MS.gene024538:CDS
TCTGAATGATACGGACGAGC+AGG 0.546245 7.2:+1981802 MS.gene024538:CDS
AAGGAGGCCATGAGGAAGAG+TGG 0.549988 7.2:+1979811 MS.gene024538:CDS
ACCGAAGAAAAGCGCTGCTA+GGG 0.550483 7.2:+1971789 MS.gene024538:CDS
AATTGTCTGTAAATAGGCTA+AGG 0.551876 7.2:-1975567 None:intergenic
TCTCAAAATTGTGTCAGTGC+TGG 0.552524 7.2:+1973284 MS.gene024538:CDS
TGCATCCTATCTGAATGATA+CGG 0.553061 7.2:+1981793 MS.gene024538:CDS
AAGAATACCTTTGTGAACAA+TGG 0.554034 7.2:-1982127 None:intergenic
ATCATTGGAACATTCGCCAA+TGG 0.555479 7.2:-1973119 None:intergenic
AGGCATGCCATTGTATGTGA+GGG 0.557311 7.2:+1976769 MS.gene024538:CDS
CAGATCCTATAACAGAGAAT+GGG 0.557862 7.2:-1976615 None:intergenic
AATGCCTCCACTCTTCCTCA+TGG 0.559030 7.2:-1979818 None:intergenic
CAAAATGACGCCGAAGATGT+TGG 0.560588 7.2:-1975597 None:intergenic
GCTTGTCATGGTGCAGAGAG+AGG 0.561389 7.2:-1975072 None:intergenic
AATAGCCATGAAAATTTCAT+CGG 0.561616 7.2:-1974951 None:intergenic
GACAATGTCACCATAGAAGA+TGG 0.562927 7.2:+1976736 MS.gene024538:CDS
TTACATTGACATCTGCTCGC+CGG 0.564196 7.2:+1975540 MS.gene024538:CDS
ACTGCTTCTGAATTATTGGA+TGG 0.564790 7.2:+1978817 MS.gene024538:CDS
ACAAGGAATATACCGTGGCT+CGG 0.564823 7.2:+1976245 MS.gene024538:CDS
GAACTGGAGTTAATTCATGA+TGG 0.565184 7.2:+1979897 MS.gene024538:CDS
GGAGACTTTGTCCTTATCAG+TGG 0.573784 7.2:+1974788 MS.gene024538:CDS
GGGGCTCAACCTGCTTGTCA+TGG 0.573811 7.2:-1975084 None:intergenic
TGAATCAGCTGGTGTAGAAG+AGG 0.574781 7.2:+1973163 MS.gene024538:CDS
TTCATAACATCTGGTACCAG+TGG 0.577449 7.2:-1976192 None:intergenic
AAGAGTGATAGGTCTAAACT+TGG 0.579985 7.2:-1971881 None:intergenic
TGCTGACAGTGTCATAACTT+CGG 0.582802 7.2:-1976143 None:intergenic
AAGTATTCTTCCACCTTCTG+GGG 0.583960 7.2:+1979920 MS.gene024538:CDS
AGTATCTCTACTACAGCAGC+CGG 0.584040 7.2:+1977315 MS.gene024538:CDS
TCATAGATGGACATATCCAC+TGG 0.588064 7.2:+1976176 MS.gene024538:CDS
CTTGTCATGGTGCAGAGAGA+GGG 0.589004 7.2:-1975071 None:intergenic
GCTATCCATCAGTCTCGACT+TGG 0.593196 7.2:+1974926 MS.gene024538:CDS
CGGGTCAAATGTACACATAG+AGG 0.593427 7.2:+1976699 MS.gene024538:CDS
GCCAACAGAATCGCCTGTAA+CGG 0.595148 7.2:-1971844 None:intergenic
TTGTCTGTAGTGGCTAAAAG+AGG 0.596027 7.2:+1982938 MS.gene024538:intron
CTCGTCCGTATCATTCAGAT+AGG 0.596542 7.2:-1981798 None:intergenic
AGCACAGTGGATAAGTCAGA+TGG 0.596852 7.2:+1978790 MS.gene024538:CDS
AAGCAACATGTCGCTTACTC+AGG 0.597045 7.2:+1974820 MS.gene024538:CDS
TTCATGTTGTACTTACCAAG+TGG 0.599094 7.2:+1981759 MS.gene024538:CDS
CGGAACAAACCTCTGAAGCA+GGG 0.599221 7.2:-1978849 None:intergenic
TAGGCATGCCATTGTATGTG+AGG 0.601520 7.2:+1976768 MS.gene024538:CDS
GAAGAAAGGCGCGGATGAGG+CGG 0.603471 7.2:+1982764 MS.gene024538:CDS
GGTAACAGCTCCCCAGAAGG+TGG 0.603673 7.2:-1979930 None:intergenic
AAGCGCTGCTAGGGTTTCAG+AGG 0.606605 7.2:+1971798 MS.gene024538:CDS
TTGACATGGCTTGAATCAGC+TGG 0.610800 7.2:+1973152 MS.gene024538:CDS
GTTTGCTCCATTGTTCACAA+AGG 0.615724 7.2:+1982120 MS.gene024538:CDS
TGATAAATTACACATTGACA+TGG 0.618999 7.2:+1973138 MS.gene024538:CDS
AAGTTATGACACTGTCAGCA+AGG 0.620949 7.2:+1976146 MS.gene024538:CDS
AATGTGTTTGGAATCTGCGA+AGG 0.621847 7.2:+1982096 MS.gene024538:CDS
GTTTGGCCAAAATGTGAAGG+AGG 0.624679 7.2:+1979795 MS.gene024538:CDS
TTAAAAGACAGCACAACACC+AGG 0.626342 7.2:-1976823 None:intergenic
GGGTCAAATGTACACATAGA+GGG 0.626953 7.2:+1976700 MS.gene024538:CDS
GGCATGCCATTGTATGTGAG+GGG 0.631236 7.2:+1976770 MS.gene024538:CDS
TTAGGTAACAGCTCCCCAGA+AGG 0.638298 7.2:-1979933 None:intergenic
TCCGCGCAGATTATGCTGCA+AGG 0.638328 7.2:+1976109 MS.gene024538:CDS
TATCACTCTTGAACGCCCCA+AGG 0.638983 7.2:+1971894 MS.gene024538:CDS
TCATGGTGCAGAGAGAGGGA+AGG 0.640432 7.2:-1975067 None:intergenic
GAATATGCTGATAGTACTAG+TGG 0.642214 7.2:+1977364 MS.gene024538:CDS
TTTCATCCATACCCGAGCCA+CGG 0.644715 7.2:-1976257 None:intergenic
GAGGCCATGAGGAAGAGTGG+AGG 0.645571 7.2:+1979814 MS.gene024538:CDS
GCTACTAAGCTTGAAAGACA+AGG 0.649677 7.2:+1976228 MS.gene024538:CDS
TAGTAATGCTGTAATGACCA+TGG 0.655646 7.2:+1974877 MS.gene024538:CDS
GGAAGAGTGGAGGCATTCAG+TGG 0.663488 7.2:+1979824 MS.gene024538:CDS
AGCTCACCAGCTGAACTATG+GGG 0.666465 7.2:-1980997 None:intergenic
TATGTTTGGCCAAAATGTGA+AGG 0.666968 7.2:+1979792 MS.gene024538:CDS
AGAGATACTTGTGAATAAGG+AGG 0.676241 7.2:-1977301 None:intergenic
GGAAGATGAGAAGAAAGGCG+CGG 0.690784 7.2:+1982755 MS.gene024538:CDS
TGCAGCCATCACCAGCACAG+TGG 0.703317 7.2:+1978777 MS.gene024538:intron
TATTATATACGAGCGCAACG+TGG 0.703453 7.2:+1973319 MS.gene024538:CDS
GCATGCCATTGTATGTGAGG+GGG 0.713162 7.2:+1976771 MS.gene024538:CDS
AAAATGTGAAGGAGGCCATG+AGG 0.717990 7.2:+1979803 MS.gene024538:CDS
ACTATTTGGAGAAATCTGAG+TGG 0.722937 7.2:+1973225 MS.gene024538:CDS
TCCTTGCAGCATAATCTGCG+CGG 0.727596 7.2:-1976110 None:intergenic
GAAAGACAAGGAATATACCG+TGG 0.737588 7.2:+1976240 MS.gene024538:CDS
GAACACGAACAAGCTCATCG+TGG 0.778351 7.2:-1971822 None:intergenic
ATTGCACTACATGTATAACG+AGG 0.789338 7.2:+1982701 MS.gene024538:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.2 gene 1971781 1982992 1971781 ID=MS.gene024538
chr7.2 mRNA 1971781 1982992 1971781 ID=MS.gene024538.t1;Parent=MS.gene024538
chr7.2 exon 1971781 1971915 1971781 ID=MS.gene024538.t1.exon1;Parent=MS.gene024538.t1
chr7.2 CDS 1971781 1971915 1971781 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1973110 1973340 1973110 ID=MS.gene024538.t1.exon2;Parent=MS.gene024538.t1
chr7.2 CDS 1973110 1973340 1973110 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1974782 1975096 1974782 ID=MS.gene024538.t1.exon3;Parent=MS.gene024538.t1
chr7.2 CDS 1974782 1975096 1974782 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1975535 1975642 1975535 ID=MS.gene024538.t1.exon4;Parent=MS.gene024538.t1
chr7.2 CDS 1975535 1975642 1975535 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1976078 1976267 1976078 ID=MS.gene024538.t1.exon5;Parent=MS.gene024538.t1
chr7.2 CDS 1976078 1976267 1976078 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1976584 1976846 1976584 ID=MS.gene024538.t1.exon6;Parent=MS.gene024538.t1
chr7.2 CDS 1976584 1976846 1976584 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1977274 1977385 1977274 ID=MS.gene024538.t1.exon7;Parent=MS.gene024538.t1
chr7.2 CDS 1977274 1977385 1977274 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1978782 1978861 1978782 ID=MS.gene024538.t1.exon8;Parent=MS.gene024538.t1
chr7.2 CDS 1978782 1978861 1978782 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1979771 1980013 1979771 ID=MS.gene024538.t1.exon9;Parent=MS.gene024538.t1
chr7.2 CDS 1979771 1980013 1979771 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1980090 1980166 1980090 ID=MS.gene024538.t1.exon10;Parent=MS.gene024538.t1
chr7.2 CDS 1980090 1980166 1980090 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1980921 1981012 1980921 ID=MS.gene024538.t1.exon11;Parent=MS.gene024538.t1
chr7.2 CDS 1980921 1981012 1980921 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1981741 1981823 1981741 ID=MS.gene024538.t1.exon12;Parent=MS.gene024538.t1
chr7.2 CDS 1981741 1981823 1981741 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1982070 1982141 1982070 ID=MS.gene024538.t1.exon13;Parent=MS.gene024538.t1
chr7.2 CDS 1982070 1982141 1982070 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1982699 1982824 1982699 ID=MS.gene024538.t1.exon14;Parent=MS.gene024538.t1
chr7.2 CDS 1982699 1982824 1982699 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
chr7.2 exon 1982948 1982992 1982948 ID=MS.gene024538.t1.exon15;Parent=MS.gene024538.t1
chr7.2 CDS 1982948 1982992 1982948 ID=cds.MS.gene024538.t1;Parent=MS.gene024538.t1
Gene Sequence

>MS.gene024538

ATGGGAGCACCGAAGAAAAGCGCTGCTAGGGTTTCAGAGGACCACGATGAGCTTGTTCGTGTTCCGTTACAGGCGATTCTGTTGGCTGATAGTTTTACTACCAAGTTTAGACCTATCACTCTTGAACGCCCCAAGGTAATTTCTATTTTTTTGTTGATTCTTGCAATGTTCATTCATAAACATGAATTTGTTATTTTTTGTTTGAATTGTTGAATTTTGATGCGTTTATTCATTATTTTTGGTTGAATTTATGAATTCATTGTTTTTGGTTTGAGTTTTTGAAATGTGATATATATATATATATATATCGGACCCTGCATATGCGGGAGCTCTAGTGCACCGGGTTGCCCTTTTTTTTATATATCTATGAAGCACTGACACTAGACATTGACATTGATATGACACTGGCACGACACCGATAATAATTTGAAAAGAAAATCACGTAATTCATTGTAATCATACGTTTCGGTGATCAAAAGTGTAGGTGCTACAGAGTTTGTGATATAATTATGTATTTGTTAATTTAAGGTGCTATTGCCATTGGTGATTGTTGCGATGATAAATTTCACATTGGTTAATTTGAACATTTGTGTGGTAAGACTAGATGGGATAGGATTAGAAATGACAATATTAGAGAGAGTTGGAGTACCAACTATAGTAGAAAAGGTGGTTGAAAATAGGCATAGGTGGTTTGGGCATGTAGAGATGTAGCTAGGAGAGTAGATCAGATGGAGGATACCGAGAAAAATTATAAGAGAACCTATTAGGAGAGATTTAGAAATTAATAAGTTGGACTGAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCCGATCCCGCTTAGTCGGAAAAGCCTTCTTTGTTGTTGTTGTTAGTTTCAACATTCATATTCATATATAAGAACAATTTCAACATTCATATATAAGAACATGGATTTACTTATTTGAGCTTATGTAATGACATAAATTTTGTGAGGCTGTATGGAAGAACTTATGGAAATAACTGATGACATGTTTACAAGCTGTTTTCAGCTTATTTTCATCAGTTCACCATGATAGCTTATGAAAACAGTTTATAGCTTATATAAAAACAATTTAACTTAATTTACTTTTGATATAGAAATAGGTTATACATAAGCGGTTATCATGATAAGCGCTTATGCTATAAGCTGCAAATAAGCTGTTTATCGAAACTAGGCCGTATTTGTTTGTTAATTTAAGGTGCTTTTGCCATTGGTGAATGCTTCGATTATAAATTACTCATTAACATTATTTTTATTTGAATTTTGATATATTTATTTGTTTCTTGATTTAAGGTGCTTTTACCATTGGCGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTTACTGTAACAACTATTGAGTCTCAAAATTGTGTCAGTGCTGGAGATGCACTGCGTATTATATACGAGCGCAACGTGGTATGTATTTTCTTCATTTCGTTCTTCAATTTCAACTTATGTCTGAAAATTTCTAGCTATTGTAAATATGCTACAGTGGTATTCACATGTATTTTAAGACTTAAAAAGTTGATATTATAATTTGAAGTCTGTATTGAACAATGGTTGTTGTGTTCTTGGTTAGAATTGGTTTTCAGTTAAGAAACCTGGATACATAGTATGATATGGGTACAATATGGCACTGATTTAAGGATTAAAGAGAAAATTTTGAAAATCAAGGAATGGCTAAGATATGCTAACAAAAGACATTTGCATTACTTATTTGTTGCTCATTAATACTTTAATATTTTAATAGTTAATATACGATGATCACAAGTAATTGTGATCATCCAACAATAGGCTTAGTGACATATGTTTTTCACATCTATATCAGAATATATTATTTCTACTATGAATGTGTTGGCTCCGCTGGGTAAAAAATCAGATTTTAGAGAGAAAGAATCAAAGAAACACATGCAGGGATTTTTCTGCAAGGGAGAATTTCCCTTTTCCAACAGAATACAGTTTTTATTATGATCAATCAAAATGAATGGATCCCAAACATGGGGGTAACAGTATTTGTAATCTCCCTTGCTGCTACTAACTACTAATTTCCAGCCTTTCCCTCTCTAACTACTAACTGCTGCATAAACTTAGTGGTCCCTATTCCTTCTAGAGAATTTTGGAATCTCTTGGCTCCTAACAGAATGTGTCACAAAAAGCATACAATTTTGTGTCTTTATTTAGTATTTAGTAAGAAGTATTAAAGATGTATCTTATCTGGATGGCAATAATGTCTTTAGTTGATAATATGTTTCGAAGATGTACCTGAGCAGTATTGAGGGGAATATTTTTAGTAAGAATAAAAAAATTTGGATACTTTCTGGGTACATATTGTAGGTACATATCGGACCCATATCGGTATTAAATGCATGTTAGGAAACAATACTTTCATTTTTGGAGTATTTGGGCTTCCAAGCTTTTTAAGATGAGGTGTCTTCTTACATGTAAAGAACCCTAGCTACCTCCTAGTCTAGATAAGGTTATGGCTTTCTTAGAATTGAGGTCTCTTTTTTTTGTTTTTGTAATAAACAGATTTTGGTCTTGTAAAAGATAATAAGTCATTCTCACCTCTTGTTGTTTGTTTCATTAGTAGTAGCAGCATAGCTGTATGATGAGAATTTATGTATGCTCTGTTCTATTGGTTCTTTAAAGGAACAAGGAAGCAATCAGAACCTTACATGTGTCATAGTAATTTGTTTTTATAATTTGGTGCATTATTTAAAATAGTTAATACAGTTTACACGTCATGCTGTTGTTGTTTGTGACTGTCTGAGTAGTGATTATTAATGTAGTTTCTTTTCACGCTTTTACTAATTTAGTTTTGTGTAGTAACACTATTGGATTATTTTCTATTTTGAAGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATTAAACGGTCAAAAACTCATCCAGCTATCCATCAGTCTCGACTTGGTACCGATGAAATTTTCATGGCTATTGATCCTAATACCAAGCAACTTTTGTATTACGAGGATAAAGCAGACTTCTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGTTGAGCCCCTTTTTTCCTATCTTTCTGCTTTGCTTTCAGGTTAACTTCACGCTAAAGAGTAATTGGTTTGCGGCTACGTACTCGTAAACGAATTATTATCGGACAAAATGCATGTATTTATTTATTTTTAGATATTCATGACCACGAAAAAAAATGCAGTTTAGTTCAGGCTCAGTTAACAATACCTGTGATGTTTTCTCCTAAAAAAAAATACCTGTGACGTTTATTGTCATTTCAACCTCATGATTGGGCTATGCTAGGAAATGATTGTTTGATTCCCAAATGAATCGATGATTTATTACTATTTGAAGTTTATTGTCAGTTGATTGCAGAGCTAGTTACTGTTATTATTAATGCTACTTTGTTTGGTCATATCTCTCTCCTGAGAAGCTATGAAACTTTCTGAGGTCATTAAGTGAATGATTTCTTTTCTGCAGGATTGTTACATTGACATCTGCTCGCCGGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATGTAATTTCTCTTCCACATGTTGAACTGTCATGAATTATTGTTTCAGAAGTTCTTAAGTCCTTTTGAATCAGCTTATCCTTTTTAATAGATGGAAAAAGCTTATCCTTTTGAATCATTTTTTTTTTTTTTGCGTGAAAAAAGATCTACTTGTTTATCTCTTACAGGCAGACCTACATTTCGTCTGAGGTGCCCTGTTTGTTGAGAACATTTAAAAAATTGAATGCTCTTTCGTATTGATAAACTGTACATCAGTACTGAAACACTTCAACAGTTTATGGACTTGCATTGGACATTTAGACTTAGAAAATATATTTTGTTTTTTGCACATGTCCTAAAGCTCATCATTTATGTTTCCAATATATTCTTTTGTGGCAGTTATTCTTGATTTTAGCATTCTGTATGCACCTCATCAACATTACCTTATATTTCTTTCAGATAATGGGATACAAAATTTTTGTTCATGAAATCCGCGCAGATTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTACCAGATGTTATGAATTTTGGCAACACAGCTACTAAGCTTGAAAGACAAGGAATATACCGTGGCTCGGGTATGGATGAAAGTTTTGGTGTTGATTGGGTGTGTTGGTGAAAAGTTTGTAACATTAAATGATAAAATGGCAAGCTTATATTGGCTCTAGTTTCCAGTTATATGTTTGCCTGTTTGCTTAATTCATGCTGTTCATTATATATAAACTTCATTTTTTTGAATGATTTAGTCAGCAAGTAATTATTGTATTATTTCATAATGAAAGTAATTATCGTATCACCCTTGTAGATTGCTGGGTCAAAACTAATTTTACCTATTGTGTTGTTTCCATTAATTGAATGTATGAAGTTTTGACAAATTCTTTTCTCCCCTATCAGATATTTCGCAAGCACAATCAGCTGTTGTTGGCCCATTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACGAAGATTTTAAATTCCGTCGTCGGAGTAGGATGCAAAATCGGGTCAAATGTACACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTATGTGAGGGGGTGATTATGAAATCAGGATCTGCTCTGGAACCTGGTGTTGTGCTGTCTTTTAAGGTTTGATACAATTTTAGTACCCATACTTCCATCCTTCATGTTTCTCATATGTTTGGACTGCTTTGAAATTTTTCACACTTCACCACAATATTCAGGTGGTCACTAAATCTAAGTATTTAAACTATATGCTTTAGTTGATGCTTGAGAATAATTGAAGCCTTTAATTTGTGTTTAGTATTTTAGTATTATTATAATATATTAACCATTAGTAGTGGTCATAATTTTCTTTCTTATGCTGCTGTACATATAACAATCTAGTGATTTATCTCATGTTTGATGATCCTAAGTGTATGTAAGATGTTTGTGAAATTCTCTGTGCTTGTTTATTTCTGTTTTTTTTTCTCATTAGATGGGAATATAGATACTTTTTTCCAGTTATTCTTCGTAAGATGGAAATATAGGGACTTGTTGTCTTTCATGTTTCCAGGTTGTAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGGTTGAGGAAGATAGCGACGAAGAGCTCGAATATGCTGATAGTACTAGTGGTATTGCCGAATTTTCATAAAGCTTTTAACTGTGCCCTATTATTATTGAATTACATTATTAGCAATTGGAAACGAGATATTGCTGCTAGCATATGAAATATTGCCTGGCTGATAGTGAGGAAAATTTTCTTTCCTTAGAACTGAATGAATTGGTGGTATTTAATTCTTCAAATATGTATTTTGAGCTTGATTAGATGTTTTGGTTTTAAAGAAGACTTGATTTGTTTAATTCTAATAATATAAAAAGAGATACCGAGGTGCATACACTGAATCTTTTATAAATATTTTGGATTGGAATAAATTTCTTTAATGCTTGTGTGAGAACCCTGAGTTCCTGTACATGTGTTGGCCCAATTACTGGGCCCAAACCACACAAGTACAGCTTCTAGAAGCCTGTAGAAGCTGTGGGAGGGAACACAAACAGTTAGAATAATTATTGGAATCAAGGGAGAATTTCAGTTATTAAACAGAGGGAATCCTAGACGGTGAAGCAGTCAGAAAGTTTGCTGAGAGTTGTTTAGGAGAGAAGTTCTCTCTGATCTAGGAGCTTAACTCTGGTAGGAGTTCTCTGAACTCTGGTTTATCCTCTCAGTTTTCTGTTTTCATCTTTGTAAGAGCTTTGAGCTCATCATTTTCCAGTTAAATAATACAGAGTTACCTTCAAATTTATGGGTTCTATCAGCTTGCCTAAAGATTTTTTTCTTGCAAAGAATTGGATTATTGCATTAGTAAAAGTTCTGAAAAACAATTGCATTTAAGTGTTTTGGTCAAACTGTTGTTGAATGAGATGTAATTGTTTAGCTAATTCTGGCTAGTCAGTATGTTTTTGAAAGTGCAATAGTCACTATTGAAACATTTTCTAACTTTGTTGGCTTGAGTACATGGGTCAACCTCTCTTGTATGGTTTTCAAAATCCAATTTAGAGAGGCTGTATAGATTCGAGTCCTTTTGAATGAACAGTCTCACACAATTTTTCTTAGTCTTCCTCTTTCTCTAGTTTTTCTGTGGAAAAAGTGTTCAGATCCTCGATAAGTGCATAAACATTTAAAAAATATTTATCATTTAAAAAAAGAATGGGAATTGGAGGACATATATACCATGTATTTTGTTATTATAAACCATTTTCATTTATCAAGTTTGATATTTTTGTCTTTTCATCATTTAATTTATAAAAATATATTTTAAATTTAATAAAGTTGAGGTCCTTAACTGTAACTGGTATTTGATAAAAATTTAGGTCCTAAAAAAATACATTACTTGATTTTCATGCTATCCTCCATTGAGTTGCAAGTAAATTTATTTTCTTTATACTATGTGTGGATGTGGATATGTTTTTTGTATGTAGATAGGTTAAATGCATATATATAGCTTTCAGTTACCATTTTCATTTATGCAGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCTGAATTATTGGATGGACATTTTAACCCTGCTTCAGAGGTTTGTTCCGGAAAACTTCTTAATTTATGTTGTTGACCATTGTTTAGCTTTACTGCTGTCATTTTGTTTCTGTTGATATTTAATATAATTGTTACTGCCAAATAACATTTTAGAGATGTAAGTTTTCTGGTTCCGTCAACCAAATTGTAGAATTTAATTTACATTTAACATTGGATAAATGTTGTCTGTTCAAATGCAATTTTTTTTTTTTTTTATTGAAATCGATTTGGTTGAGTTGTCCAGCCTGAAGATACTAAGTAACTGTTTGTGTTAAAACTGTGTTCTATTCGGTCATTGTTTTCTTCATTGATGTGAGAGGGAGATGGGCTAGTTTATGACTGTTGCACTTAAACTAACAGATCTACACAGGATAGGAGTACCTCTAGCTTTAATTTCACCCTGTGCTTGTTGTAATTCAACTCTTTGTTGATTTTGTCATGTGATCCCTGTTTTTTTTTTTCTTTCATCATGAGTATATAGATTGAAGTTTTTTTTTTATTTGGTGGTGGCCGTGGTTTGAACCCTGGACCTTTGCATATATTATGCATTGTCCCTACCAACCGAGCTAAGCTCACAAGGACATATAGATTGAAGTTTGAAGCTGATATATGAGAGATGTCTTTCTTCTGAGCACCGACAAACTTATTCGCAATATATTATCTTATCTGATTTTTCAAGTATCGTTGGTAGTGTATAAACAATATATCTGGAGATTGCATAACTCCAACCTAGTAATTTGCTGATACTTTGTGTTTCTTAGTGAACAATTCATCCGGACCATGCAAATGATTGTAGTGGATACATGCTGTGATAGAGATGTTCTGTTTAGTTACACTAAGATTTGATTGATAGAATTTTCATTTTAAAGGGAATTCACTGTTTCTTATTTTACTTTCTTTTTTTAATCAGCTAGGTTTTGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCACCTATTACTGAAGATAAAATTTTGGAGGCAATGAAAGCTATGGAAGATGAACTGGAGTTAATTCATGATGGAAGTATTCTTCCACCTTCTGGGGAGCTGTTACCTAATCCTAATGATTCAGATGACGATGATAATGATGATTTAAGAGATGACTTTGACAAAGAGGTGAGTTTTTTGACATATAAACTTACATCGGTTGCATTTTGTGGATATTCAGTTTTTAATATTCTGTCATTTGCAGGTTGAAGCAACTTTTCTGAGGGCTGTGCTTGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCTTTGAAGTATGTAATACACTTATGTCTATTATTTGAAATTGAGTCTATTATTTTGATTTTCATGCATCAAAATATGTGTGTTCGATATATATCTGGCATCCCTCTGTATTTTGGATGTTAAACATATTTTTGAATGTGTTAAACCTTTAAAAGTAAGTTGTTTTCATATTTCTCATGCATGCATCATATACTTGGTATAAAATACTTGAGTTTCCTTCAGTTTTCATGTCCGAACTAATAATAACATGATAAAGCTGGCAGTGCAAGCAGCTAACAGACTTATAATAACTGTCAAAGTTGACAGTTATTCTACTAACCGACTCAACGGAGTTAGGATATCCTATAGATACATATTAACTTTCTTAAAATAGACTAGATACAAACAACAGAACTATGGTACATAACATTGCAGAAACCTCCCTTCAAAAAAAGAAACAGAACAGAAACCTAGTGCACAATAACTGTAACACAGGCACTAGTCAAAACTTACTACATACAGTCACACATTACTCTAGTCATAGACCATCCAACCTCAACTGACCCTATCTAAATATATTAAAGAACCAGTGTTCAATTTTGTCTAGAAGCTATGCCATCTTCATGGATGATGGAGTGTGTTCATAACTATTATTTTTCTGGAACTGCAATTCTTTGACTCCGGTGTTCTCGTCATATGTGTTGATTGTTTTTATTTAATGACACTTTGAATCTGCATTCACTAGGAACTAATTTGTAGAAACATTGTTTTTATTTGTGTTAGGTTGTCATACAACAAGATAGCTGCTGATTGTGCTGGAGCTTTATTTTATGCAATGATGAAGTATGCTGTAGACTTGCCCCATAGTTCAGCTGGTGAGCTTTCATCCATATTCCTGTTGTTAGAGTCTTTTTAATCTTTCCCGTTTATTTTTTATCAGGCATAGAATATGGTTGGAAAACTTGGCATCTTGGGAAAAACCTATCAGATATATTTAGTAACAAATTATGCAGAATGTTCAGGTTACATGAATTAACTGGGAGTCTCTAGTGAGGAAAGTGTTGAATCAAATAGAAGATACTGAAATTGAAAGGGGTAGAGGGATACCTAATTAAATATAAAGAGAAACCACTATGAGAGTATAACTTCACTGTAACTACTGTATTATCTATAGTTTAGTCATTCAACTAAGTGCTGAACTGTGTGCCACTGGCATAAGTTTTTAGCTAAATCACTTACAGAATGCAAAAAGGTTCTTACATCCTACCTGTATCATATTCATTCGAGGATTGAGTGCAGAAATGCACTTCTATTCTTTTCAAGTTTTATCTCATTCTTGAGTTCTCTGAAACCACTGTAATAGCGCTTGCTCTATATGGTTTTACTGAAATTTTGGTTTATGACAAGTACATTGGTGTTAGTATCCATGGAGCTGACTCCTCCTAGTGGGGTAATGCTAAGTGGTTCATGCCCAATCTTACTTTCCAACATGTATATATGTTGGTCATATAGTTATATTTTGAACTCTCAGGGGTTTGCTTGATGATTTTATTATTGCCTTTGAGATTAATTTATATTATTGCCTGTGGGATTAATTTTTCAGATGGCTTGGTTCAGAATGTTCATGTTGTACTTACCAAGTGGAAAAAGGTTCTTGCATCCTATCTGAATGATACGGACGAGCAGGTACATCTGTTAATTCTTTCTCCTTGTTGAAGTTACTCATGTTCATTTGCGTAGTGTTCTTTAATTTGAAGAATTACCAATTGCATTATTTTTTAGTTTAATCTGGATCTTTTTTGAGATTATGCCACTCTTCTTTTATTGTGATTTCATCATCATGACATCATCCAATGTTCATTATAAGGCTTGTGAAAAAAAAAAAAACTATCTTTTGTAAATAAACTCATACGTCCAATTTTTTTGCTCCAGATCGAAGTGATTCTAAAATTTGAAGAAATGTGTTTGGAATCTGCGAAGGAGTTTGCTCCATTGTTCACAAAGGTATTCTTATCTTTTACTGGTTAGGTTATTGAGTTGTCCTTATTCAGTTGGTAGCATGTCAGAAAGGTTATCTAAGTATGAAGTTGTTGTATATCGTCTGTTACTATTAAAAATAATTTTATATATTTCATGAATTAAGCTTCTTAATGCGTGATGTTTTTATGCACCTCAGAAAGAAAAACTATAACATGGACTCAAGTTTAGACAGTGTTATATCCTCTGGGCATAGGAAAATACTTATAAGATGAATCACAACTTATGCACTACTGTTCTGTCTAAAGCCAGTGAGTTAATAATGTTGTGAAATGGATTTTAACACAATTGAAGGTCCAACAAATTTTCACGCTCGCCTAACACAATTGAAGTTCCAACAAATTTTCACGCTCGCCTACTTGCTTTGCTGACTGAAAGTAGAGTTATTTTGTTATACTGAGATCTCCCATTTTCATGCTGTCTATATACAATACTTGTAAAATGATTGGAGTCAATAGATTCATATTCTCACACTACATTGGACTCTCTTTTCCTTTGTGTTTTGACTCCTTAACTGCTTTCAGATATTGCACTACATGTATAACGAGGATATTATTGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGGCGCGGATGAGGCGGATAAAGTATTTGTTAACCAAGCTCAACCATTAATTCAAGTGAGTATCTTCGTCTATTTTTACACACGTACAAAACTAATATTATGTTACTTGCATCTTCTCAACTATCCCATGAGATGCATTACTTTCTTATGTAAGTCATTTATTTATTCTTGTCTGTAGTGGCTAAAAGAGGCTCCCGAAGAAGACGATGAAGACGAAGAGTAG

Protein sequence

>MS.gene024538.t1

MGAPKKSAARVSEDHDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLANVPMINYTLTWLESAGVEEVFVFCCAHAKQVINYLEKSEWFNQPNFTVTTIESQNCVSAGDALRIIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTHPAIHQSRLGTDEIFMAIDPNTKQLLYYEDKADFSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIRADYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQSAVVGPFSVIGSGTKIGKNTKILNSVVGVGCKIGSNVHIEGCYIWDNVTIEDGCELRHAIVCEGVIMKSGSALEPGVVLSFKVVVGQEFVVPPYSQVSLLQQPVEEDSDEELEYADSTSAITSTVDKSDGETASELLDGHFNPASELGFGGAGYVWPKCEGGHEEEWRHSVAPITEDKILEAMKAMEDELELIHDGSILPPSGELLPNPNDSDDDDNDDLRDDFDKEVEATFLRAVLENIQENHLTLEVNSLKLSYNKIAADCAGALFYAMMKYAVDLPHSSADGLVQNVHVVLTKWKKVLASYLNDTDEQIEVILKFEEMCLESAKEFAPLFTKILHYMYNEDIIEEDAILSWEDEKKGADEADKVFVNQAQPLIQWLKEAPEEDDEDEE