AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025997


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025997.t1 MTR_7g115610 98.340 723 11 1 1 723 1 722 0.0 1472
MS.gene025997.t1 MTR_6g023790 76.087 138 25 3 581 715 130 262 5.00e-60 203
MS.gene025997.t1 MTR_6g023790 59.701 67 17 1 1 67 90 146 5.60e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025997.t1 AT2G34970 62.707 724 249 7 1 714 1 713 0.0 912
MS.gene025997.t1 AT4G18300 58.287 724 269 13 1 714 1 701 0.0 815
MS.gene025997.t1 AT3G02270 55.205 730 261 14 1 719 1 675 0.0 751

Find 146 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGGCCTCCTTCACATTT+TGG 0.127019 7.1:-1891849 None:intergenic
GTACCAGATGTTATGAATTT+TGG 0.128972 7.1:+1888294 MS.gene025997:CDS
GGCAGTATTCTTCCACCTTC+TGG 0.135809 7.1:+1891966 MS.gene025997:CDS
CTTCGTGTTCTTGCCAATTT+TGG 0.166436 7.1:-1888693 None:intergenic
AGAAACTGCTTCTGATTTAT+TGG 0.194985 7.1:+1890867 MS.gene025997:CDS
AAGATACTCACTTGAATTAA+TGG 0.203717 7.1:-1894851 None:intergenic
TATTACTGAAGATAAAATTT+TGG 0.227298 7.1:+1891899 MS.gene025997:CDS
GCTTGTTCGTGTTCCGTTAC+AGG 0.244182 7.1:+1883926 MS.gene025997:CDS
GAAGCAGGTGATTAACTATT+TGG 0.248892 7.1:+1885305 MS.gene025997:CDS
ATAGGATCTGGCACCAAAAT+TGG 0.250898 7.1:+1888680 MS.gene025997:CDS
GTTGGCCCATTCTCTGTTAT+AGG 0.251239 7.1:+1888662 MS.gene025997:CDS
ATAGTTGTTACAGTAAAATT+AGG 0.269459 7.1:-1885351 None:intergenic
AGTCAAAATTGTCTGTAAAT+AGG 0.286591 7.1:-1887667 None:intergenic
TTATATTTCTTTCAGATAAT+GGG 0.293378 7.1:+1888159 MS.gene025997:intron
TTCGTCTTCATCGTCTTCTT+CGG 0.298425 7.1:-1895002 None:intergenic
TGTACTTACCAAGTGGAAAA+AGG 0.300815 7.1:+1893805 MS.gene025997:CDS
TACAAAAGTTGCTTGGTATT+AGG 0.305309 7.1:-1887071 None:intergenic
AGTAGAGATACTTGTGAATA+AGG 0.319455 7.1:-1889356 None:intergenic
ACATAGAGGGATGCTATATA+TGG 0.320652 7.1:+1888765 MS.gene025997:CDS
AAAGCTCACCAGCTGAACTA+TGG 0.322453 7.1:-1893047 None:intergenic
AAAATTTGAAGAAATGTGTT+TGG 0.336103 7.1:+1894122 MS.gene025997:CDS
GCAGTATTCTTCCACCTTCT+GGG 0.337376 7.1:+1891967 MS.gene025997:CDS
TTGGTGGGGCTGGTTATGTT+TGG 0.339452 7.1:+1891826 MS.gene025997:CDS
TCGTCTTCATCGTCTTCTTC+GGG 0.349579 7.1:-1895001 None:intergenic
TCATGTTTCCAGGTTGTAGT+TGG 0.360879 7.1:+1889314 MS.gene025997:intron
TCATCGTCATCTGAATCATT+AGG 0.362858 7.1:-1892005 None:intergenic
CCATTCTCTGTTATAGGATC+TGG 0.364215 7.1:+1888668 MS.gene025997:CDS
AAGTTCACAGCCATCTTCTA+TGG 0.377775 7.1:-1888798 None:intergenic
GTCAATGTGTAATTTATCAT+TGG 0.388585 7.1:-1885228 None:intergenic
GTCGGAGTAGGATGCAAAAT+CGG 0.392986 7.1:+1888731 MS.gene025997:CDS
GTAAATAGGCTAAGGACTTC+CGG 0.402526 7.1:-1887653 None:intergenic
CCGGAACAAACCTCTGAAGC+AGG 0.410804 7.1:-1890904 None:intergenic
GAAAGCTATGGAAGATGAAC+TGG 0.416799 7.1:+1891929 MS.gene025997:CDS
TCATCTGAATCATTAGGATT+AGG 0.423207 7.1:-1891999 None:intergenic
CTGCTGTGCTCATGCGAAGC+AGG 0.446859 7.1:+1885290 MS.gene025997:CDS
CACCGAAGAAAAGCGCTACT+AGG 0.449123 7.1:+1883883 MS.gene025997:CDS
CATGTTTCCAGGTTGTAGTT+GGG 0.449794 7.1:+1889315 MS.gene025997:intron
TTGCCAAAATTCATAACATC+TGG 0.452105 7.1:-1888297 None:intergenic
CAAGCACAATCAGCTGTTGT+TGG 0.455052 7.1:+1888644 MS.gene025997:CDS
TCGTCGCTATCTTCCTCAAC+CGG 0.456281 7.1:-1889386 None:intergenic
CCAGATCCTATAACAGAGAA+TGG 0.458173 7.1:-1888668 None:intergenic
CTCTCTGCACCATGACAAGC+AGG 0.458401 7.1:+1887169 MS.gene025997:CDS
TCGGAGTAGGATGCAAAATC+GGG 0.464129 7.1:+1888732 MS.gene025997:CDS
CTTGAATTAATGGTTGAGCT+TGG 0.472089 7.1:-1894841 None:intergenic
AATTGACTTCTAAAGTCAAA+TGG 0.473008 7.1:-1892185 None:intergenic
TAATGACCATGGTTATTAAA+CGG 0.473067 7.1:+1886982 MS.gene025997:CDS
TTTCCAGGTTGTAGTTGGGC+AGG 0.474402 7.1:+1889319 MS.gene025997:intron
GCAAGGATATAATTCATAGA+TGG 0.481776 7.1:+1888259 MS.gene025997:CDS
AAGCTCACCAGCTGAACTAT+GGG 0.483922 7.1:-1893046 None:intergenic
ACTGCTTCTGATTTATTGGA+TGG 0.487652 7.1:+1890871 MS.gene025997:CDS
TCTACTACAGCAGCCGGTTG+AGG 0.489304 7.1:+1889373 MS.gene025997:CDS
TATGAAATCAGGATCTGCTC+TGG 0.490344 7.1:+1888850 MS.gene025997:CDS
GACTTGCCCCATAGTTCAGC+TGG 0.494761 7.1:+1893039 MS.gene025997:CDS
TTAAATTCCGTCGTCGGAGT+AGG 0.496201 7.1:+1888719 MS.gene025997:CDS
GATAAAGCAGACTTCTCAAA+AGG 0.505881 7.1:+1887101 MS.gene025997:CDS
AAGATAGCTGCTGATTGTGC+TGG 0.506462 7.1:+1892982 MS.gene025997:CDS
CAAGGAATATACCGTGGCTC+AGG 0.508177 7.1:+1888342 MS.gene025997:CDS
TTGGGGCGTTCAAGAGTGAT+AGG 0.508515 7.1:-1883987 None:intergenic
CTTATCCACTGTGCTGGTGA+TGG 0.511806 7.1:-1890836 None:intergenic
TTACGGTATCTCCACTGATA+AGG 0.515780 7.1:-1886893 None:intergenic
TCAGGATCTGCTCTGGAACC+TGG 0.517246 7.1:+1888857 MS.gene025997:CDS
CTCGTAATACAAAAGTTGCT+TGG 0.522774 7.1:-1887078 None:intergenic
TCCGTTACAGGCGATTCTGT+TGG 0.523711 7.1:+1883938 MS.gene025997:CDS
AAGAGATGACTTTGACAAAG+AGG 0.524902 7.1:+1892040 MS.gene025997:CDS
TTTGCATCCTACTCCGACGA+CGG 0.525897 7.1:-1888726 None:intergenic
TAGAAGATGGCTGTGAACTT+AGG 0.527350 7.1:+1888801 MS.gene025997:CDS
AGTTGGGAAGATGAGAAGAA+AGG 0.528430 7.1:+1894788 MS.gene025997:CDS
ATCTGACTTATCCACTGTGC+TGG 0.528457 7.1:-1890842 None:intergenic
CAGTATTCTTCCACCTTCTG+GGG 0.529996 7.1:+1891968 MS.gene025997:CDS
CGGTACCAAGTCGAGACTGA+TGG 0.534696 7.1:-1887025 None:intergenic
AGTCGAGACTGATGGATAGC+TGG 0.535756 7.1:-1887017 None:intergenic
TTTGGAGGCAGTGAAAGCTA+TGG 0.537606 7.1:+1891917 MS.gene025997:CDS
CATAGAGGGATGCTATATAT+GGG 0.540737 7.1:+1888766 MS.gene025997:CDS
TCTGAATGATACGGACGAGC+AGG 0.546245 7.1:+1893841 MS.gene025997:CDS
AAGGAGGCCATGAGGAAGAG+TGG 0.549988 7.1:+1891859 MS.gene025997:CDS
AATTGTCTGTAAATAGGCTA+AGG 0.551876 7.1:-1887661 None:intergenic
TCTCAAAATTGTGTCAGTGC+TGG 0.552524 7.1:+1885378 MS.gene025997:CDS
TGAGAAGAAAGGCGCAGATG+AGG 0.552926 7.1:+1894799 MS.gene025997:CDS
TGCATCCTATCTGAATGATA+CGG 0.553061 7.1:+1893832 MS.gene025997:CDS
AGTAAGCGACATGTTGCTTA+CGG 0.553527 7.1:-1886910 None:intergenic
AAGAATACCTTTGTGAACAA+TGG 0.554034 7.1:-1894165 None:intergenic
GGCAATACCACTAGTACTAT+CGG 0.554274 7.1:-1889423 None:intergenic
ATCATTGGAACATTCGCCAA+TGG 0.555479 7.1:-1885213 None:intergenic
AGGCATGCCATTGTATGTGA+GGG 0.557311 7.1:+1888821 MS.gene025997:CDS
CAGATCCTATAACAGAGAAT+GGG 0.557862 7.1:-1888667 None:intergenic
AATGCCTCCACTCTTCCTCA+TGG 0.559030 7.1:-1891866 None:intergenic
CAAAATGACGCCGAAGATGT+TGG 0.560588 7.1:-1887691 None:intergenic
GCTTGTCATGGTGCAGAGAG+AGG 0.561389 7.1:-1887166 None:intergenic
AATAGCCATGAAAATTTCAT+CGG 0.561616 7.1:-1887045 None:intergenic
ACCGAAGAAAAGCGCTACTA+GGG 0.562681 7.1:+1883884 MS.gene025997:CDS
GACAATGTCACCATAGAAGA+TGG 0.562927 7.1:+1888788 MS.gene025997:CDS
TTACATTGACATCTGCTCGC+CGG 0.564196 7.1:+1887634 MS.gene025997:CDS
GGAGACTTTGTCCTTATCAG+TGG 0.573784 7.1:+1886882 MS.gene025997:CDS
GGGGCTCAACCTGCTTGTCA+TGG 0.573811 7.1:-1887178 None:intergenic
TGAATCAGCTGGTGTAGAAG+AGG 0.574781 7.1:+1885257 MS.gene025997:CDS
TTCATAACATCTGGTACCAG+TGG 0.577449 7.1:-1888288 None:intergenic
AAGAGTGATAGGTCTAAACT+TGG 0.579985 7.1:-1883976 None:intergenic
TGCTGACAGTGTCATAACTT+CGG 0.582802 7.1:-1888239 None:intergenic
AAGCAACATGTCGCTTACTC+AGG 0.583205 7.1:+1886914 MS.gene025997:CDS
AGTATCTCTACTACAGCAGC+CGG 0.584040 7.1:+1889367 MS.gene025997:CDS
TCATAGATGGACATATCCAC+TGG 0.588064 7.1:+1888272 MS.gene025997:CDS
CTTGTCATGGTGCAGAGAGA+GGG 0.589004 7.1:-1887165 None:intergenic
GCTATCCATCAGTCTCGACT+TGG 0.593196 7.1:+1887020 MS.gene025997:CDS
GAACTGGAGTTAATTCATGA+TGG 0.593221 7.1:+1891945 MS.gene025997:CDS
CGGGTCAAATGCACACATAG+AGG 0.594505 7.1:+1888751 MS.gene025997:CDS
GCCAACAGAATCGCCTGTAA+CGG 0.595148 7.1:-1883939 None:intergenic
TTGTCTGTAGTGGCTAAAAG+AGG 0.596027 7.1:+1894976 MS.gene025997:intron
CTCGTCCGTATCATTCAGAT+AGG 0.596542 7.1:-1893837 None:intergenic
AGCACAGTGGATAAGTCAGA+TGG 0.596852 7.1:+1890844 MS.gene025997:CDS
TTCATGTTGTACTTACCAAG+TGG 0.599094 7.1:+1893798 MS.gene025997:CDS
CGGAACAAACCTCTGAAGCA+GGG 0.599221 7.1:-1890903 None:intergenic
TAGGCATGCCATTGTATGTG+AGG 0.601520 7.1:+1888820 MS.gene025997:CDS
GGTAACAGCTCCCCAGAAGG+TGG 0.603673 7.1:-1891978 None:intergenic
GAAGAAAGGCGCAGATGAGG+CGG 0.605565 7.1:+1894802 MS.gene025997:CDS
TTGACATGGCTTGAATCAGC+TGG 0.610800 7.1:+1885246 MS.gene025997:CDS
AAGCGCTACTAGGGTTTCAG+AGG 0.613636 7.1:+1883893 MS.gene025997:CDS
GTTTGCTCCATTGTTCACAA+AGG 0.615724 7.1:+1894158 MS.gene025997:CDS
TGATAAATTACACATTGACA+TGG 0.618999 7.1:+1885232 MS.gene025997:CDS
AAGTTATGACACTGTCAGCA+AGG 0.620949 7.1:+1888242 MS.gene025997:CDS
AATGTGTTTGGAATCTGCGA+AGG 0.621847 7.1:+1894134 MS.gene025997:CDS
GTTTGGCCAAAATGTGAAGG+AGG 0.624679 7.1:+1891843 MS.gene025997:CDS
TTAAAAGACAGCACAACACC+AGG 0.626342 7.1:-1888875 None:intergenic
GGGTCAAATGCACACATAGA+GGG 0.626404 7.1:+1888752 MS.gene025997:CDS
GGCATGCCATTGTATGTGAG+GGG 0.631236 7.1:+1888822 MS.gene025997:CDS
TTAGGTAACAGCTCCCCAGA+AGG 0.638298 7.1:-1891981 None:intergenic
TCCGCGCAGATTATGCTGCA+AGG 0.638328 7.1:+1888205 MS.gene025997:CDS
TATCACTCTTGAACGCCCCA+AGG 0.638983 7.1:+1883989 MS.gene025997:CDS
GAATATGCCGATAGTACTAG+TGG 0.640314 7.1:+1889416 MS.gene025997:CDS
TCATGGTGCAGAGAGAGGGA+AGG 0.640432 7.1:-1887161 None:intergenic
GAGGCCATGAGGAAGAGTGG+AGG 0.645571 7.1:+1891862 MS.gene025997:CDS
GCTACTAAGCTTGAAAGACA+AGG 0.649677 7.1:+1888324 MS.gene025997:CDS
TAGTAATGCTGTAATGACCA+TGG 0.655646 7.1:+1886971 MS.gene025997:CDS
GGAAGAGTGGAGGCATTCAG+TGG 0.663488 7.1:+1891872 MS.gene025997:CDS
AGCTCACCAGCTGAACTATG+GGG 0.666465 7.1:-1893045 None:intergenic
TATGTTTGGCCAAAATGTGA+AGG 0.666968 7.1:+1891840 MS.gene025997:CDS
TTTCATCCATACCTGAGCCA+CGG 0.672449 7.1:-1888353 None:intergenic
AGAGATACTTGTGAATAAGG+AGG 0.676241 7.1:-1889353 None:intergenic
TGCAGCCATCACCAGCACAG+TGG 0.703317 7.1:+1890831 MS.gene025997:intron
TATTATATACGAGCGCAACG+TGG 0.703453 7.1:+1885413 MS.gene025997:CDS
GCATGCCATTGTATGTGAGG+GGG 0.713162 7.1:+1888823 MS.gene025997:CDS
AAAATGTGAAGGAGGCCATG+AGG 0.717990 7.1:+1891851 MS.gene025997:CDS
ACTATTTGGAGAAATCTGAG+TGG 0.722937 7.1:+1885319 MS.gene025997:CDS
TCCTTGCAGCATAATCTGCG+CGG 0.727596 7.1:-1888206 None:intergenic
GAAAGACAAGGAATATACCG+TGG 0.737588 7.1:+1888336 MS.gene025997:CDS
GAACACGAACAAGCTCATCG+TGG 0.778351 7.1:-1883917 None:intergenic
ATTGCACTACATGTATAACG+AGG 0.789338 7.1:+1894739 MS.gene025997:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.1 gene 1883876 1895030 1883876 ID=MS.gene025997
chr7.1 mRNA 1883876 1895030 1883876 ID=MS.gene025997.t1;Parent=MS.gene025997
chr7.1 exon 1883876 1884010 1883876 ID=MS.gene025997.t1.exon1;Parent=MS.gene025997.t1
chr7.1 CDS 1883876 1884010 1883876 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1885204 1885434 1885204 ID=MS.gene025997.t1.exon2;Parent=MS.gene025997.t1
chr7.1 CDS 1885204 1885434 1885204 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1886876 1887190 1886876 ID=MS.gene025997.t1.exon3;Parent=MS.gene025997.t1
chr7.1 CDS 1886876 1887190 1886876 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1887629 1887736 1887629 ID=MS.gene025997.t1.exon4;Parent=MS.gene025997.t1
chr7.1 CDS 1887629 1887736 1887629 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1888174 1888363 1888174 ID=MS.gene025997.t1.exon5;Parent=MS.gene025997.t1
chr7.1 CDS 1888174 1888363 1888174 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1888636 1888898 1888636 ID=MS.gene025997.t1.exon6;Parent=MS.gene025997.t1
chr7.1 CDS 1888636 1888898 1888636 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1889326 1889437 1889326 ID=MS.gene025997.t1.exon7;Parent=MS.gene025997.t1
chr7.1 CDS 1889326 1889437 1889326 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1890836 1890915 1890836 ID=MS.gene025997.t1.exon8;Parent=MS.gene025997.t1
chr7.1 CDS 1890836 1890915 1890836 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1891819 1892061 1891819 ID=MS.gene025997.t1.exon9;Parent=MS.gene025997.t1
chr7.1 CDS 1891819 1892061 1891819 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1892138 1892214 1892138 ID=MS.gene025997.t1.exon10;Parent=MS.gene025997.t1
chr7.1 CDS 1892138 1892214 1892138 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1892969 1893060 1892969 ID=MS.gene025997.t1.exon11;Parent=MS.gene025997.t1
chr7.1 CDS 1892969 1893060 1892969 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1893780 1893862 1893780 ID=MS.gene025997.t1.exon12;Parent=MS.gene025997.t1
chr7.1 CDS 1893780 1893862 1893780 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1894108 1894179 1894108 ID=MS.gene025997.t1.exon13;Parent=MS.gene025997.t1
chr7.1 CDS 1894108 1894179 1894108 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1894737 1894862 1894737 ID=MS.gene025997.t1.exon14;Parent=MS.gene025997.t1
chr7.1 CDS 1894737 1894862 1894737 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
chr7.1 exon 1894986 1895030 1894986 ID=MS.gene025997.t1.exon15;Parent=MS.gene025997.t1
chr7.1 CDS 1894986 1895030 1894986 ID=cds.MS.gene025997.t1;Parent=MS.gene025997.t1
Gene Sequence

>MS.gene025997

ATGGGAGCACCGAAGAAAAGCGCTACTAGGGTTTCAGAGGACCACGATGAGCTTGTTCGTGTTCCGTTACAGGCGATTCTGTTGGCTGATAGTTTTACTACCAAGTTTAGACCTATCACTCTTGAACGCCCCAAGGTAATTTCTATTTTTTTGTTGATTCTTGCAATGTTCATTCATAAACATGAATTTGTTATTTTTTGTTTGAATTGTTGAATTTTGATGCGTTTATTCATTATTTTTGGTTGAATTTATGAATTCATTGTTTTTGGTTTGAGTTTTTGAAATGTGATATATATATATATCGGACCCTGCATATGCGGGAGCTCTAGTGCACCGGGTTGCCCTTTTTTTATATATCTATGAAGCACTGACACTAGACATTGACATTGATATGACACTGGCACGACACCGATAATAATTTGAAAAGAAAATCACGTAATTCATTGTAATCGTACGTTTCGGTGATCAAAAGTGTAGGTGCTACAGAGTTTGTGATATAATTATGTATTTGTTAATTTAAGGTGCTATTGCCATTGGTGATTGTTGCGATGATAAATTTCACATTGGTTAATTTGAACATTTGTGTGGTAAGACTAGATGGGATAGGATTAGAAATGACAATATTAGAGAGAGAGAGTTGGAGTACCAACTATAGTAGAAAAGGTGGTTGAAAATAGGCATAGGTGGTTTGGGCATGTAGAGATGTAGCTAGGAGAGTAGATCGGATGGAGGATACCGAGAAAAATTATAAGAGAACCTATTAGGAGAGATTTAGAAATTAATAAGTTGGACTGAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCCGATCCCGCTTAGTCGGAAAAGCCTTCTTTGTTGTTGTTGTTAGTTTCAACATTCATATTCATATATAAGAACAATTTCAACATTCATATATAAGAACATGGATTTACTTATTTGAGCTTATGTAATGACATAAATTTTGTGAGGCTGTATGGAAGAACATATAACTGATGACATGTTTACAAGCTGTTTTCAGCTTATTTTCATCAGTTCACCATGATAGCTTATGAAAACAGTTTATAGCTTATATAAAAACAATTTAACTTAATTTACTTATGATATAGAAATAGGTTATACATAAGCGGTTATCATGATAAGCGCTTATGCTATAAGCTGCAAATAAGCTGTTTATCTAAACTAGGCCGTATTTGTTTGTTAATTTAAGGTGCTTTTGCCATTGGTGAATGCTTCGATTATAAATTACTCATTAACATTAATTCATTATTTTTATTTGAATTTTGATATATTTATTTGTTTCTTGATTTAAGGTGCTTTTACCATTGGCGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTTACTGTAACAACTATTGAGTCTCAAAATTGTGTCAGTGCTGGAGATGCACTGCGTATTATATACGAGCGCAACGTGGTATGTATTTTCTTCATTTCGTTCTTCAATTTCAACTTCTGTCTGAAAATTTCTAGCTATTGTAAATATGCTACAGTGGTATTCACATGTATTTTAAGACTTAAAAAGTTGATATTTTAATTTGAAGTCTGTATTGAACAATGGTTGTTGTGTTCTTGGTTAGAATTGGTTTTCAGTTAAGAAACCTGGATACATAGTATGATATGGGTACAATATGGCACTGATTTAAGGATTAAAGAGAAAATTTTGAAAATCAAGGAATGGCTAAGATATGCTAACAAAAGACATTTGCATTACTTATTTGTTGCTCATTAATACTTTAATATTTTAATAGTTAATATACGATGATCACAAGTAATTGTGATCATCCAACAATAGGCTTAGTGACATATGTTTTTCACATCTATATCAGAATATATTATTTCTACTATGAATGTGTTGGCTCCGCTGGGTAAAAAATCAGATTTTAGAGAGAAAGAATCAAAGAAACACATGCAGGGATTTTTCTGCAAGGGAGAATTTCCCTTTTCCAACAGAATACAGTTTTTTTTATGATCAATCAAAATGAATGGATCCCAAACATGGGGGTAACAGTATTTGTAATCTCCCTTGCTGCTACTAACTACTAATTTCCAGCCTTTCCCTCTCTAACTACTAACTGCTGCATAAACTTAGTGGTCCCTATTCCTTCTAGAGAATTTTGGAATCTCTTGGCTCCTAACAAAATGTGTCACAAAAAGCATACAATTTTGTGTCTTTATTTAGTATTTAGTAAGAAGTATTAAAGATGTATCTTATCTGGATGGCAATAATGTCTTTAGTTGATAATATGTTTCGAAGATGTACCTGAGGAGTATTGAGGGGAATATTTTTAGTAAGAACAAAAAAATTTGGATACTTTCTGGGTACATATTGTAGGTACATATCGGACCCATATTGGTATTAAATGCATGTTTGGAAACAATACTTTCATTTTTGGAGTATTTGGGCTTCCAAGCTTTTTAAGATGAGGTGTCTTCTTACATGTAAAGAACCCTAGCTACCTCCTAGTCTAGGTAAGGTTATGGCTTTCTTAGAATTGAGTTCTCTTTTTTTTGTTTTTGTAATAAACAGATTTTGGTCTTGTAAAAGATAATAAGTCATTCTCACCTCTTGTTGTTTGTTTCATTAGTAGTAGCAGCATAGCTGTATGATGAGAATTTATGTATGCTCTGTTCTATTGGTTCTTTAAAGGAACAAGGAAGCAATCAGAACCTTACATGTGTCATAGTAATTTGTTTTTATGATTTGGTGCATTATTTAAAATAGTTAATACAGTTTACACGTCATGCTGTTGTTGTTTGTGACTGTCTGAGTAGTGATTATTAATGTAGTTTCTTTTCACGCTTTTACTAATTTAGTTTTGTGTAGTAACACTATTGGATTATTTTCTATTTTGAAGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACCGTAAGCAACATGTCGCTTACTCAGGCACTTTTAGAACATAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATTAAACGGTCAAAAACTCATCCAGCTATCCATCAGTCTCGACTTGGTACCGATGAAATTTTCATGGCTATTGATCCTAATACCAAGCAACTTTTGTATTACGAGGATAAAGCAGACTTCTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGTTGAGCCCCTTTTTTCCTATCTTTCTGCTTTGCTTTCAGGTTAACTTCACGCTAAAGAGTAATTGGTTTGCGGCTACGTACTCGTAAACGAATTATTATCGGACAAAATGCATGTATTTATTTATTTTTAGATATTCATGACCACGAAAAAAAATGCAGTTTAGTTCAGGCTCAGTTAACAATACCTGTGATGTTTTCTCCTAAAAAAAAATACCTGTGATGTTTATTGTCATTTCAACCTCATGATTGGGCTATGCTAGGAAATGATTGTTTGATTCCCAAATGAATCGATGATTTATTACTATTTGAAGTTTATTGTCAGTTGATTGCAGAGCTAGTTACTGTTGTTATTAATGCTACTTTGTTTGGTCATATCTCTCTCCTGAGAAGCTATGAAACTTTCTGAGGTCATTAAGTGAATGATTTCTTTTCTGCAGGATTGTTACATTGACATCTGCTCGCCGGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATGTAATTTCTCTTCCACATGTTGAACTGTCATGAATTATTGTTTCAGAAGTTCTTAAGTCCTTTTGAATCAGCTTATCCTTTTTCATAGATGGAAAAAGCTTATCCTTTTGAATCATTTTTTTTTTTTTTTTGCGTGAAAAAAGATCTACTTGTTTATCTCTTACAGGCAGACCTACATTTCGTCTGAGGTGCCCTGTTTGTTGAGAACATTTAAAAAATTGAATGCTCTTTCGTATTGATAAACTGTACATCAGTACTGAAACACTTCAACAGTTTATGGACTTGCATTGGACATTTAGACTTAGAAAATATATTTTGTTTTTTGCACATGTCCTAAAGCTCATCATTTATGTTTCCAATATATTCTTTTGTGGCAGTTATTCTTGATTTTAGCATTCTGTATGCACCTCATCAACGTTACCTTATATTTCTTTCAGATAATGGGATACAAAATTTTTGTTCATGAAATCCGCGCAGATTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCATAGATGGACATATCCACTGGTACCAGATGTTATGAATTTTGGCAACACAGCTACTAAGCTTGAAAGACAAGGAATATACCGTGGCTCAGGTATGGATGAAAGTTTTGGTGTTGATTGGGTGTGTTGGTGAAAAGTTTGTAACATTAAATGATAAAATGGCAAGCTTATATTGGCTCTAGTTTCCAGTTATATGTTTGCCTGTTTGCTTAATTCATGCTGTTCATTATATATAAACTTCATTTTTTTGAATGATTTAGTCAGCAAGTAATTATTGTATTATTTCATAATACATTTTACCTATTGTGTTGTTTCCATTAATTGAATGTATGAAGTTTTGACAAATTCTTTTCTCCCCTATCAGATATTTCGCAAGCACAATCAGCTGTTGTTGGCCCATTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACGAAGATTTTAAATTCCGTCGTCGGAGTAGGATGCAAAATCGGGTCAAATGCACACATAGAGGGATGCTATATATGGGACAATGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTATGTGAGGGGGTGATTATGAAATCAGGATCTGCTCTGGAACCTGGTGTTGTGCTGTCTTTTAAGGTTTGATACAATTTTAGTACCCATACTACCATCCTTCATGTTTCTCATATGTTTGGACTGCTTTGAAATTTTTCACACTTCACCACAATATTCAGGTGGTCACTAAATCTAAGTATTTAAACTATATGCTTTAGTTGATGCTTGAGAATAATTGAAGCCTTTAATTTTTGTGTTTAGTATTTTAGTATTATTATAATATATTAACCATTAGTAGTGGTCATAATTTTCTTTCTTATGCTGCTGTACATATAACAATCTAGTGATTTATTTCATGTTTGATGATCCTAAGTGTATGTAAGATGTTTGTGAAATTCTGTGCTTGTTTATTTCTGTTTTTTTTTCTCATTAGATGGGAATATAGATACTTTTTTCCAGTTATTCTTCGTAAGATGGAAATATAGGGACTTGTTGTCTTTCATGTTTCCAGGTTGTAGTTGGGCAGGAGTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGGTTGAGGAAGATAGCGACGAAGAGCTCGAATATGCCGATAGTACTAGTGGTATTGCCGAATTTTCATAAAGCTTTTAACTGTGCCCTATTATTATTGAATTACATTATTAGCAATTGGAAATGAGATATTGCTGCTAGCATATGAAATATTGCCTGGCTGATAGTGAGGAAAATTTTCTTTCCTTAGAACTGAATGAATTGGTGGTATTTAATTCTTCAAATATGTATTTTGAGCTTGATTAGATGTTTTGGTTTTAAAGAAGACTTGATTTGTTTAATTCTAATAATATAAAAAGAGATACCGAGGTGTGCATACACTGAATCTTTTATAAATATTTTGGATTGGAATAAATTTCTTTAATGCTTGTGTGAGAACCCTGAATTCCTGTACATGTGTTGGCCCAATTACTGGGCCCAAACCACACAAGTACAGCTTCTAGAAGCCTGTAGAAGCTGTGGGAGGGAACACAAACAGTTAGAATAATTATTGGAATCAAGGGAGAATTTCAGTTATTAAACAGAGGGAATCCTAGACGGTGAAGCAGTCAGAAAGTTTACTGAGAGTTGTTTAGGAGAGAAGTTCTCTCTGATCTAGGAGCTTAACTCTGGTAGGAGTTCTCTGAACTCTGGTTTATCCTCTCAGTTTTCTGTTTTCATCTTTGTAAGAGCTTTGAGCTCATCATTTTCCAGTTAAATAATACAGAGTTACCTTCAAATTTATGGGTTCTATCAGCTTGCCTAAAGATTTTTTTCTTGCAAAGAATTGGATTATTGCATTAGTAAAAGTTCTGAAAAACAATTGCATTTAAGTGTTTTGGTCAAACTGTTGTTGAATGAGATGTAATTGTTTAGCTAATTCTGGCTAGTCAGTATGTTTTTGAAAGTGCAATAGTCACTATTGAAACATTTTCTAACTTTGTTGGCTTGAGTACATGGGTCAACCTCTCTTGTATGGTTTTCAAAATCCAATTTAGAGAGGCTGTATAGATTCGAGTCCTTTTGAATGAACAGTCTCACACAATTTTTCTTAGTCTTCCTCTTTCTCTAGTTTTTCTGTGGAAAAAGTGTTCAGATCCTCGATAAGTGCATAAACATTTAAAAAATATTTATCATTTAAAAAAAGAATGGGAATTGGAGGACATATATACCATGTATTTTGTTATTATAAACCATTTTCATTTATCAAGTTTGATATTTTTGTCTTTTCATCATTTAATTTATAAAAATATATTTTAAATTTAATAAAGTTGAGGTCCTTAACTGTAACTGGTATTTGATAAAAATTTAGGTCCTAAAAAAATACATTACTTGATTTTCATGCTATCCTCCATTGAGTTGCAAGTAAATTTATTTTCTTTATACTATGTGTGGATGTGGATATGTTTTTTGTATGTAGATAGGTTAAATGCATATATATAGCTTTCAGTTACCATTTTCATTTATGCAGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCTGATTTATTGGATGGACATTTTAACCCTGCTTCAGAGGTTTGTTCCGGAAAACTTCTTAATTTATGTTGTTGACCATTGTTTAGCTTTACTGCTGTCATTTTGTTTCTGTTGATATTTAATATAATTGTTACTGCCAAATAACATTTTAGAGATGTAAGTTTTCTGGTTCCGTCAACCAAATTGTAGAATTTAATTTACATTTAACATTGGATAAATGTTGTCTGTTCAAATGCAATTTTATTTTTTTTGATTGAAATCGATTTGGTTGAGTTGTCCAGCCTGAAGATACTAAGTAACTGTTTGTGTTAAAACTGTGTTCTATTCGGTCATTGTTTTCTTCATTGATGTGAGAGGGAGATGGGCTAGTTTATGACTGTTGCACTTAAACTAACAGATCTACACAGGATAGGAGTACCTCTAGCTTTAATTTCACCGTGCTTGTTGTAATTCAACTCTTTGTTGATTTTGTCATGTGATCCCTGTTTTTTTTTCCTTTCATCATGAGTATATAGATTGAAGTTTTTTTTTATTTGGTGGTGGCCGTGGTTTGAACCCCGGACCTTGCATATATTATGCATTGTCCCTACCAACCGAGCTAAGCTCACAAGGACATATAGATTGAAGTTTGAAGCTGATATATGAGAGATGTCTTTCTTCTGAGCACCGACAAACTTATTCGCAATATATTATCTTATCTGATTTTTCAAGTATCGTTGGTAGTGTATAAACAATATATCTGGAGATTGCATAACTCCAACCTAGTAATTTGCTGATACTTTGTGTTTCTTAGTGAACAATTCATCCGGACCATGCAAATGATTGTAGTGGATACATGCTGTGATAGAGATGTTCTGTTTAGTTACACTAAGATTTGATTGATAGAATTTTCATTTTAAAGGGAATTCACTGTTTCTTATTTTACTTTCTTTTTTTAATCAGCTAGGTTTTGGTGGGGCTGGTTATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCACCTATTACTGAAGATAAAATTTTGGAGGCAGTGAAAGCTATGGAAGATGAACTGGAGTTAATTCATGATGGCAGTATTCTTCCACCTTCTGGGGAGCTGTTACCTAATCCTAATGATTCAGATGACGATGATAATGATGATTTAAGAGATGACTTTGACAAAGAGGTGAGTTTTTTGACATATAAACTTACATCGGTTGCATTTTGTGGATATTCAGTTTTTAATATTCTGTCATTTGCAGGTTGAAGCAACTTTTCTGAGGGCTGTGCTTGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCTTTGAAGTATGTAATACACTTATGTCTATTATTTGAAATTGAGTCTATTATTTTGATTTTCATGCATCAAAATATGTGTGTTCGATATATATCTGGCATCCCTCTGTATTTTGGATGTTAAACATATTTTTGAATGTGTTAAACCTTTAAAAGTAAGTTGTTTTCATATTTCTCATGCATGCATCATATACTTGGTATAAAATACTTGAGTTTCCTTCAGTTTTCATGTCCGAACTAATAATAACATGATAAAGCTGGCAGTGCAAGCAGCTAACAGACTTATAATAACTGTCAAAGTTGACAGTTATTCTACTAACCGACTCAACGGAGTTAGGATATCCTATAGATACATATTAACTTTCTTAAAATAGACTAGATACAAACAACAGAACTATGGTACATAACATTGCAGAAACCTCCCTTCAAAAAAAGAAACAGAACAGAAACCTAGTGCACAATAACTGTAACACAGGCACTAGTCAAAACTTACTACATACAATCACACATTACTCTAGTCATAGACCATCCAACCTCAACTGACCCTATCTAAATATATTAAAGAACCAGTGTTCAATTTTGTCTAGAAGCTATGCCATCTTCATGGATGATGGAGTGTGTTCATAACTATTATTTTTCTGGAACTGCAATTCTTTGACTCCGGTGTTCTCGTCATATGTGTTGATTGTTTTTATTTAATGACACTTTGAATCTGCATTCACTAGGAACTAATTTGTAGAAACATTGTTTTTATTTGTGTTAGGTTGTCATACAACAAGATAGCTGCTGATTGTGCTGGAGCTTTATTTTATGCAATGATGAAGTATGCTGTAGACTTGCCCCATAGTTCAGCTGGTGAGCTTTCATCCATATTCCTGTCTTTTTAATCTTTCCCGTTTATTTTTTATCAGGCATAGAATATGGTTGGAAAACTTGGCATCTTGGGAAAAACCTATCAGATATATTTAGTAACAAATTATGCAGAATGTTCAGGTTACATGAATTAACTGGGAGTCTCTAGTGAGGAAAGTGTTGAATCAAATAGAAGATACTGAAATTGAAAGGGGTAGAGGGATACCTAATTAAATATAAAGAGAAACCACTATGAGAGTATAACTTCACTGTAACTACTGTATTATCTATAGTTTAGTCATTCAACTAAGTGCTGAACTGTGTGCCACTGGCATAAGTTTTTAGCTAAATCACTTACAGAATGCAAAAAGGTTCTTACATCCTACCTGTATCATATTCATTCGAGGATTGAGTGCAGAAATGCACTTCTATTCTTTTCAAGTTTTATCTCATTCTTGAGTTCTCTGAAACCACTGTAATAGCGCTTGCTCTATATGGTTTTACTGAAATTTTGGTTTATGACAAGTACATTGGTGTTAGTATCCATGGAGCTGACTCCTCCTAGTGGGGTAATGCTAAGTGGTTCATGCCCAATCTTACTTTCCAACATGTATATATGTTGGTCATATAGTTATATTTTGAACTCTCAGGGGTTTGCTAGATGATTTTATTATTGCCTTTGAGATTAATTTATATTATTGCCTCTGGGATTAATTTTTCAGATGGCTTGGTTCAGAATGTTCATGTTGTACTTACCAAGTGGAAAAAGGTTCTTGCATCCTATCTGAATGATACGGACGAGCAGGTACATCTGTTAATTCTTTCTCCTTGTTGAAGTTACTCATGTTCATTTGCGTAGTGTTCTTTAATTTGAAGAATTACCAATTGCATTATTTTTTAGTTTAATCTGGATCTTTTTTGAGATTATGCCACTCTTCTTTTATTGTGATTTCATCATGATGACATCATCCAATGTTCATTATAAGGCTTGTGAAAAAAAAAAAACTATCTTTTGTAAATAAACTCATACGTCCAATTTTTTTGCTCCAGATCGAAGTGATTCTAAAATTTGAAGAAATGTGTTTGGAATCTGCGAAGGAGTTTGCTCCATTGTTCACAAAGGTATTCTTATCTTTTACTGGTTAGGTTATTGAGTTGTCCTTATTCAGTTGGTAGCATGTCAGAAAGGTTATCTAAGTATGAAGTTGTTGTATATCGTCTGTTACTATTAAAAATAATTTTATATATTTCATGAATTAAGCTTCTTAATGCGTGATGTTTTTATGCACCTCAGAAAGAAAAACTATAACATGGACTCAAGTTTAGACAGTGTTATATCCTCTGGGCATAGGAAAATACTTATAAGATGAATCACAACTTATGCACCACTGTTCTGTCTAAAGCCAGTGAGTTAATAATGTTGTGAAATGGATTTTAACACAATTGAAGGTCCAACAAATTTTCACGCTCGCCTAACACAATTGAAGTTCCAACAAATTTTCACGCTCGCCTACTTGCTTTGCTGACAGAAAGTAGAGTTATTTTGTTATACTGAGATCTCCCATTTTCATGCTGTCTATATACAATACTTGTAAAATGATTGGAGTCAATAGATTCATATTCTCACACTACATTGGACTCTCTTTTCCTTTGTGTTTTGACTCCTTAACTGCTTTCAGATATTGCACTACATGTATAACGAGGATATTATTGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGGCGCAGATGAGGCGGATAAAGTATTTGTTAACCAAGCTCAACCATTAATTCAAGTGAGTATCTTCGTCTATTTTTGCACACGTACAAAACTAATATTATGTTACTTGCATCTTCTCAACTATCCCATGAGATGCATTACTTTCTTATGTAAGTCATTTATTTATTCTTGTCTGTAGTGGCTAAAAGAGGCTCCCGAAGAAGACGATGAAGACGAAGAGTAG

Protein sequence

>MS.gene025997.t1

MGAPKKSATRVSEDHDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLANVPMINYTLTWLESAGVEEVFVFCCAHAKQVINYLEKSEWFNQPNFTVTTIESQNCVSAGDALRIIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTHPAIHQSRLGTDEIFMAIDPNTKQLLYYEDKADFSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIRADYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQSAVVGPFSVIGSGTKIGKNTKILNSVVGVGCKIGSNAHIEGCYIWDNVTIEDGCELRHAIVCEGVIMKSGSALEPGVVLSFKVVVGQEFVVPPYSQVSLLQQPVEEDSDEELEYADSTSAITSTVDKSDGETASDLLDGHFNPASELGFGGAGYVWPKCEGGHEEEWRHSVAPITEDKILEAVKAMEDELELIHDGSILPPSGELLPNPNDSDDDDNDDLRDDFDKEVEATFLRAVLENIQENHLTLEVNSLKLSYNKIAADCAGALFYAMMKYAVDLPHSSADGLVQNVHVVLTKWKKVLASYLNDTDEQIEVILKFEEMCLESAKEFAPLFTKILHYMYNEDIIEEDAILSWEDEKKGADEADKVFVNQAQPLIQWLKEAPEEDDEDEE