Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028385.t1 | XP_013457257.1 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 6.20E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028385.t1 | Q8S1Z1 | 69.0 | 229 | 71 | 0 | 1 | 229 | 1 | 229 | 7.2e-84 | 311.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028385.t1 | B7FKL3 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 4.5e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028385 | MS.gene054186 | PPI |
| MS.gene028385 | MS.gene056257 | PPI |
| MS.gene028385 | MS.gene02213 | PPI |
| MS.gene028385 | MS.gene36329 | PPI |
| MS.gene028385 | MS.gene48368 | PPI |
| MS.gene028385 | MS.gene50744 | PPI |
| MS.gene028385 | MS.gene072782 | PPI |
| MS.gene028385 | MS.gene002256 | PPI |
| MS.gene028385 | MS.gene27648 | PPI |
| MS.gene028385 | MS.gene99744 | PPI |
| MS.gene028385 | MS.gene023799 | PPI |
| MS.gene028385 | MS.gene029242 | PPI |
| MS.gene028385 | MS.gene52173 | PPI |
| MS.gene028385 | MS.gene76511 | PPI |
| MS.gene028385 | MS.gene42236 | PPI |
| MS.gene028385 | MS.gene060830 | PPI |
| MS.gene028385 | MS.gene001986 | PPI |
| MS.gene028385 | MS.gene85127 | PPI |
| MS.gene028385 | MS.gene059422 | PPI |
| MS.gene028385 | MS.gene003693 | PPI |
| MS.gene028385 | MS.gene23314 | PPI |
| MS.gene028385 | MS.gene56868 | PPI |
| MS.gene028385 | MS.gene41916 | PPI |
| MS.gene028385 | MS.gene01229 | PPI |
| MS.gene028385 | MS.gene015586 | PPI |
| MS.gene028385 | MS.gene019309 | PPI |
| MS.gene028385 | MS.gene033253 | PPI |
| MS.gene028385 | MS.gene47800 | PPI |
| MS.gene028385 | MS.gene037324 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028385.t1 | MTR_4g094380 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 5.64e-167 | 459 |
| MS.gene028385.t1 | MTR_4g094380 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.75e-99 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028385.t1 | AT3G60360 | 61.572 | 229 | 87 | 1 | 1 | 229 | 1 | 228 | 1.05e-102 | 297 |
Find 36 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCTTCAAAGTGAGAAAA+AGG | 0.290672 | 4.4:+20333683 | MS.gene028385:CDS |
| ACGCTCTTTGTGAGCAGGTC+TGG | 0.296864 | 4.4:-20332501 | None:intergenic |
| ATGTGAAAGAAGACACTTTA+CGG | 0.340011 | 4.4:+20332681 | MS.gene028385:CDS |
| ATATTCCTGATAATATTAAA+AGG | 0.347552 | 4.4:+20336947 | MS.gene028385:CDS |
| ATTGATGAAGACACAAGATA+TGG | 0.356282 | 4.4:+20333647 | MS.gene028385:CDS |
| ATGATCAATCAAGTGCAAAT+TGG | 0.364827 | 4.4:-20333826 | None:intergenic |
| CGCTCTTTGTGAGCAGGTCT+GGG | 0.369189 | 4.4:-20332500 | None:intergenic |
| TGTTTCAATCACAGGTACTT+AGG | 0.379172 | 4.4:+20332785 | MS.gene028385:intron |
| GGTCTTCGAGGAAGAAATTC+GGG | 0.397372 | 4.4:+20332612 | MS.gene028385:intron |
| GGCACTGAAGAAGGAGTTGC+AGG | 0.398896 | 4.4:+20338204 | MS.gene028385:CDS |
| AGGTCTTCGAGGAAGAAATT+CGG | 0.408654 | 4.4:+20332611 | MS.gene028385:intron |
| AGAGAAAGTCTACATGGATA+TGG | 0.427839 | 4.4:+20338183 | MS.gene028385:CDS |
| TGTGAAAGAAGACACTTTAC+GGG | 0.432035 | 4.4:+20332682 | MS.gene028385:CDS |
| TGTATACCGGTCTACCGGTT+GGG | 0.433095 | 4.4:-20338361 | None:intergenic |
| GTTTCAATCACAGGTACTTA+GGG | 0.442736 | 4.4:+20332786 | MS.gene028385:intron |
| GATGAAATCGTCAACCCAAC+CGG | 0.458704 | 4.4:+20338347 | MS.gene028385:CDS |
| TGAGGACGCTCTTTGTGAGC+AGG | 0.462799 | 4.4:-20332506 | None:intergenic |
| CATGGATATGGCACTGAAGA+AGG | 0.470703 | 4.4:+20338195 | MS.gene028385:CDS |
| ATGTTTACTTTGCTGACGAC+AGG | 0.476056 | 4.4:+20333865 | MS.gene028385:CDS |
| CCATGTAGACTTTCTCTAGC+TGG | 0.476669 | 4.4:-20338177 | None:intergenic |
| AGTGTCTTCTTTCACATGAA+AGG | 0.479919 | 4.4:-20332675 | None:intergenic |
| CGTCAACCCAACCGGTAGAC+CGG | 0.488357 | 4.4:+20338355 | MS.gene028385:CDS |
| TCAGCACGCCACTTGTATAC+CGG | 0.511012 | 4.4:-20338374 | None:intergenic |
| TTGATGAAGACACAAGATAT+GGG | 0.519917 | 4.4:+20333648 | MS.gene028385:CDS |
| CCATTATTATTAGGTCTTCG+AGG | 0.522940 | 4.4:+20332600 | MS.gene028385:intron |
| CCAGCTAGAGAAAGTCTACA+TGG | 0.523733 | 4.4:+20338177 | MS.gene028385:CDS |
| GAGAAAGAGAGTTACGGTTG+AGG | 0.524326 | 4.4:-20332524 | None:intergenic |
| AAGTAAACATGCTTGTTCGC+TGG | 0.531696 | 4.4:-20333852 | None:intergenic |
| TTGTATACCGGTCTACCGGT+TGG | 0.532048 | 4.4:-20338362 | None:intergenic |
| ATCAGGAATATTGTCAGAAG+TGG | 0.555454 | 4.4:-20336935 | None:intergenic |
| CTTACAAAGAGTTGCAAGCA+AGG | 0.563371 | 4.4:+20338140 | MS.gene028385:CDS |
| GGAATATTGTCAGAAGTGGA+TGG | 0.588001 | 4.4:-20336931 | None:intergenic |
| CCACTTGTATACCGGTCTAC+CGG | 0.609261 | 4.4:-20338366 | None:intergenic |
| TTTGTGAGCAGGTCTGGGAA+CGG | 0.611566 | 4.4:-20332495 | None:intergenic |
| CCGGTAGACCGGTATACAAG+TGG | 0.669014 | 4.4:+20338366 | MS.gene028385:CDS |
| AAAAGCTGCTAATAGAAACG+AGG | 0.712242 | 4.4:+20332810 | MS.gene028385:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAAATTATATAAA+TGG | + | chr4.4:20334652-20334671 | MS.gene028385:intron | 0.0% |
| !!! | ATTTTTTTTTTTTTTTGAAC+AGG | - | chr4.4:20336349-20336368 | None:intergenic | 10.0% |
| !! | AATTAAAAGAAATCATTGTT+CGG | + | chr4.4:20334045-20334064 | MS.gene028385:intron | 15.0% |
| !! | ATATTCCTGATAATATTAAA+AGG | + | chr4.4:20336947-20336966 | MS.gene028385:CDS | 15.0% |
| !! | ATTATACTATTAGATTAGAT+TGG | + | chr4.4:20333951-20333970 | MS.gene028385:intron | 15.0% |
| !! | TATGTATAAATTGTTAATGT+AGG | + | chr4.4:20333751-20333770 | MS.gene028385:intron | 15.0% |
| !! | TGTTAAAAAAAAAGTAATTG+TGG | - | chr4.4:20334695-20334714 | None:intergenic | 15.0% |
| !!! | AATGATTTCTTTTAATTTGT+AGG | - | chr4.4:20334042-20334061 | None:intergenic | 15.0% |
| !!! | ATGATTTCTTTTAATTTGTA+GGG | - | chr4.4:20334041-20334060 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTCCATTATTATT+AGG | + | chr4.4:20332591-20332610 | MS.gene028385:intron | 15.0% |
| !!! | TCTATTATTTTTTTTGTAGT+AGG | + | chr4.4:20335965-20335984 | MS.gene028385:intron | 15.0% |
| !!! | TTTTTTTTTTGTGCTTTAAA+TGG | + | chr4.4:20335256-20335275 | MS.gene028385:intron | 15.0% |
| !! | AAAAATTTCCCAAATCAATA+CGG | + | chr4.4:20334992-20335011 | MS.gene028385:intron | 20.0% |
| !! | AAAATCAGATTATAAGTAAG+GGG | + | chr4.4:20336006-20336025 | MS.gene028385:intron | 20.0% |
| !! | AATGTGATTTAATTCAAAAC+AGG | + | chr4.4:20336562-20336581 | MS.gene028385:intron | 20.0% |
| !! | ACAATAAATGCTTAAGTATT+AGG | + | chr4.4:20337157-20337176 | MS.gene028385:intron | 20.0% |
| !! | ATCATCATCTATAAAAATGT+AGG | + | chr4.4:20336863-20336882 | MS.gene028385:intron | 20.0% |
| !! | ATGTGATTTAATTCAAAACA+GGG | + | chr4.4:20336563-20336582 | MS.gene028385:intron | 20.0% |
| !! | CAAAATATGTAATATACATG+CGG | - | chr4.4:20336643-20336662 | None:intergenic | 20.0% |
| !! | CATGAAAATATGATTCAATA+TGG | - | chr4.4:20337923-20337942 | None:intergenic | 20.0% |
| !! | GAAAATCAGATTATAAGTAA+GGG | + | chr4.4:20336005-20336024 | MS.gene028385:intron | 20.0% |
| !! | TAGTATATTTACGTACTTTA+GGG | + | chr4.4:20333191-20333210 | MS.gene028385:intron | 20.0% |
| !! | TATACATGAATTTGTAAGAT+TGG | - | chr4.4:20334534-20334553 | None:intergenic | 20.0% |
| !! | TCATCATCTATAAAAATGTA+GGG | + | chr4.4:20336864-20336883 | MS.gene028385:intron | 20.0% |
| !! | TGTAAAAATACAACTATAGA+GGG | - | chr4.4:20334008-20334027 | None:intergenic | 20.0% |
| !! | TTAGTATATTTACGTACTTT+AGG | + | chr4.4:20333190-20333209 | MS.gene028385:intron | 20.0% |
| !! | TTGATAGACAAATTAAAACA+GGG | + | chr4.4:20337468-20337487 | MS.gene028385:intron | 20.0% |
| !! | TTGTAAAAATACAACTATAG+AGG | - | chr4.4:20334009-20334028 | None:intergenic | 20.0% |
| !! | TTTGATAGACAAATTAAAAC+AGG | + | chr4.4:20337467-20337486 | MS.gene028385:intron | 20.0% |
| !!! | AAAAAACATTTCTAGAAATC+CGG | - | chr4.4:20338093-20338112 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTGTCTACACT+AGG | - | chr4.4:20335290-20335309 | None:intergenic | 20.0% |
| !!! | ATTTGGGAAATTTTTAGATT+TGG | - | chr4.4:20334987-20335006 | None:intergenic | 20.0% |
| !!! | CTATTTAGATTTTAGATGTA+AGG | + | chr4.4:20336690-20336709 | MS.gene028385:intron | 20.0% |
| !!! | CTTTACCTTTTAATATTATC+AGG | - | chr4.4:20336955-20336974 | None:intergenic | 20.0% |
| !!! | CTTTTTATAAGTTTTGACAA+AGG | + | chr4.4:20333089-20333108 | MS.gene028385:intron | 20.0% |
| !!! | GAAACTGATTTAATTAAACA+TGG | - | chr4.4:20335575-20335594 | None:intergenic | 20.0% |
| !!! | GACAGATTTTATATAGTTTA+GGG | + | chr4.4:20333162-20333181 | MS.gene028385:intron | 20.0% |
| !!! | GTTTATTGATTAAGTAATTG+TGG | - | chr4.4:20334721-20334740 | None:intergenic | 20.0% |
| !!! | TGACAGATTTTATATAGTTT+AGG | + | chr4.4:20333161-20333180 | MS.gene028385:intron | 20.0% |
| !!! | TTCTTTTCTTATAACAAGTT+TGG | + | chr4.4:20333904-20333923 | MS.gene028385:intron | 20.0% |
| ! | ACTAACTTAAGAACAAACTA+TGG | - | chr4.4:20334135-20334154 | None:intergenic | 25.0% |
| ! | ATAACAAGTAACAAGAATAC+AGG | - | chr4.4:20336799-20336818 | None:intergenic | 25.0% |
| ! | CGAAAATCAGATTATAAGTA+AGG | + | chr4.4:20336004-20336023 | MS.gene028385:intron | 25.0% |
| ! | GTTAATTCAAAAACTGTTGA+TGG | + | chr4.4:20332853-20332872 | MS.gene028385:CDS | 25.0% |
| ! | GTTCTTAATTAGATATGTCA+TGG | - | chr4.4:20335519-20335538 | None:intergenic | 25.0% |
| ! | TAAAACAGGGAAAAATAGAA+TGG | + | chr4.4:20337481-20337500 | MS.gene028385:intron | 25.0% |
| ! | TATATGATCAGAAAAATGGT+AGG | + | chr4.4:20338306-20338325 | MS.gene028385:intron | 25.0% |
| ! | TATCAATGACAATTAAGAAG+TGG | + | chr4.4:20335540-20335559 | MS.gene028385:intron | 25.0% |
| ! | TCATCATCATTAATATGACT+AGG | + | chr4.4:20335048-20335067 | MS.gene028385:intron | 25.0% |
| ! | TCCATATATGATCAGAAAAA+TGG | + | chr4.4:20338302-20338321 | MS.gene028385:intron | 25.0% |
| ! | TCCTTATTCGACTTAAATAT+TGG | - | chr4.4:20337509-20337528 | None:intergenic | 25.0% |
| ! | TCTTATAACAAGTTTGGATT+GGG | + | chr4.4:20333910-20333929 | MS.gene028385:intron | 25.0% |
| ! | TGCATATGTAAAGACTAAAA+CGG | - | chr4.4:20338262-20338281 | None:intergenic | 25.0% |
| ! | TGTTTACGTATATCTTGTTA+TGG | + | chr4.4:20337417-20337436 | MS.gene028385:intron | 25.0% |
| ! | TTCTTATAACAAGTTTGGAT+TGG | + | chr4.4:20333909-20333928 | MS.gene028385:intron | 25.0% |
| !! | AATACAGCAATTTAAAGTGT+AGG | + | chr4.4:20335456-20335475 | MS.gene028385:intron | 25.0% |
| !! | AATCATATTTTCATGCTACT+GGG | + | chr4.4:20337928-20337947 | MS.gene028385:intron | 25.0% |
| !! | ACTAAATAATTCTAGGGATA+TGG | + | chr4.4:20337066-20337085 | MS.gene028385:intron | 25.0% |
| !! | CGCATGTATATTACATATTT+TGG | + | chr4.4:20336641-20336660 | MS.gene028385:intron | 25.0% |
| !! | GTTTTATGATTGTTAGTTGT+TGG | + | chr4.4:20333574-20333593 | MS.gene028385:intron | 25.0% |
| !! | TAACTACTTTCTATCCTTTT+CGG | + | chr4.4:20332900-20332919 | MS.gene028385:intron | 25.0% |
| !! | TATATGATTGTTGTTCTTGA+AGG | + | chr4.4:20335613-20335632 | MS.gene028385:intron | 25.0% |
| !! | TGTTCTGTACAGTAATATTT+TGG | + | chr4.4:20337181-20337200 | MS.gene028385:intron | 25.0% |
| !!! | ACCATTTTTCTGATCATATA+TGG | - | chr4.4:20338306-20338325 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTTTTTCTTGCAC+AGG | + | chr4.4:20338104-20338123 | MS.gene028385:intron | 25.0% |
| !!! | GGATGAGTTTTATTTTAAGA+TGG | + | chr4.4:20332831-20332850 | MS.gene028385:CDS | 25.0% |
| !!! | GTATATATAGTTTTTTCCGA+CGG | - | chr4.4:20334262-20334281 | None:intergenic | 25.0% |
| !!! | TACTCCTTTCTTATTTCTAT+GGG | + | chr4.4:20336467-20336486 | MS.gene028385:intron | 25.0% |
| !!! | TTTTTGTTTGTTTCAATCAC+AGG | + | chr4.4:20332777-20332796 | MS.gene028385:intron | 25.0% |
| !!! | TTTTTTTGTAGTAGGATGAT+GGG | + | chr4.4:20335973-20335992 | MS.gene028385:intron | 25.0% |
| !!! | TTTTTTTTGTAGTAGGATGA+TGG | + | chr4.4:20335972-20335991 | MS.gene028385:intron | 25.0% |
| AAAGAGATATTCACGATTGT+TGG | + | chr4.4:20335749-20335768 | MS.gene028385:intron | 30.0% | |
| AAAGCTTCAAAGTGAGAAAA+AGG | + | chr4.4:20333683-20333702 | MS.gene028385:CDS | 30.0% | |
| AAATCATTGTTCGGATTTGA+TGG | + | chr4.4:20334054-20334073 | MS.gene028385:intron | 30.0% | |
| AACTAGCCACATAAAAATCA+AGG | - | chr4.4:20333557-20333576 | None:intergenic | 30.0% | |
| AAGTAGTTAGTTACATACAC+TGG | - | chr4.4:20332889-20332908 | None:intergenic | 30.0% | |
| AAGTGAAATATTGCAGAGAA+AGG | - | chr4.4:20332728-20332747 | None:intergenic | 30.0% | |
| ACTAGCCACATAAAAATCAA+GGG | - | chr4.4:20333556-20333575 | None:intergenic | 30.0% | |
| AGAAAATAACGTATGTGAAG+AGG | - | chr4.4:20332552-20332571 | None:intergenic | 30.0% | |
| AGATTATAAGTAAGGGGTTT+GGG | + | chr4.4:20336012-20336031 | MS.gene028385:intron | 30.0% | |
| AGTGAAATATTGCAGAGAAA+GGG | - | chr4.4:20332727-20332746 | None:intergenic | 30.0% | |
| ATAAAAATCAAGGGTCTGTT+TGG | - | chr4.4:20333547-20333566 | None:intergenic | 30.0% | |
| ATAAGCTGAATTAGACACAT+AGG | + | chr4.4:20335210-20335229 | MS.gene028385:intron | 30.0% | |
| ATAATCTAAGTCTGCATTGA+AGG | + | chr4.4:20337621-20337640 | MS.gene028385:intron | 30.0% | |
| ATGATCAATCAAGTGCAAAT+TGG | - | chr4.4:20333829-20333848 | None:intergenic | 30.0% | |
| ATGGAAAAACTTTATCGACA+CGG | - | chr4.4:20337319-20337338 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGACACTTTA+CGG | + | chr4.4:20332681-20332700 | MS.gene028385:CDS | 30.0% | |
| ATTGATGAAGACACAAGATA+TGG | + | chr4.4:20333647-20333666 | MS.gene028385:CDS | 30.0% | |
| CAAGATGAAAAAAGAACGAA+TGG | - | chr4.4:20338055-20338074 | None:intergenic | 30.0% | |
| CAATAGATAAGCTTCAAACA+TGG | + | chr4.4:20333131-20333150 | MS.gene028385:intron | 30.0% | |
| CATAGAAATAAGAAAGGAGT+AGG | - | chr4.4:20336468-20336487 | None:intergenic | 30.0% | |
| CATGAATTTGTAAGATTGGT+AGG | - | chr4.4:20334530-20334549 | None:intergenic | 30.0% | |
| CTTATTAAATGTTCATGAGC+TGG | - | chr4.4:20333067-20333086 | None:intergenic | 30.0% | |
| GAAAATCAGCTATTCATATG+AGG | - | chr4.4:20335179-20335198 | None:intergenic | 30.0% | |
| GAAATGATGCAATAAAGACA+AGG | - | chr4.4:20335822-20335841 | None:intergenic | 30.0% | |
| GACAATTTCATCAAGAAAGT+AGG | + | chr4.4:20337598-20337617 | MS.gene028385:intron | 30.0% | |
| GAGAAGAAAAGAATATGCTT+TGG | + | chr4.4:20336231-20336250 | MS.gene028385:intron | 30.0% | |
| GATGATAAAAAAGTTGACTG+AGG | - | chr4.4:20336849-20336868 | None:intergenic | 30.0% | |
| GCATATGTAAAGACTAAAAC+GGG | - | chr4.4:20338261-20338280 | None:intergenic | 30.0% | |
| GCCAATATTTAAGTCGAATA+AGG | + | chr4.4:20337505-20337524 | MS.gene028385:intron | 30.0% | |
| GTCGGTACTAAATAATTCTA+GGG | + | chr4.4:20337060-20337079 | MS.gene028385:intron | 30.0% | |
| TATAAGAATAGGTATGGGTA+AGG | + | chr4.4:20335391-20335410 | MS.gene028385:intron | 30.0% | |
| TATGTGTCTAATTCAGCTTA+TGG | - | chr4.4:20335211-20335230 | None:intergenic | 30.0% | |
| TCTATAAAAATGTAGGGAAG+AGG | + | chr4.4:20336870-20336889 | MS.gene028385:intron | 30.0% | |
| TCTTAAGGTCAAATAAGAAG+TGG | - | chr4.4:20335888-20335907 | None:intergenic | 30.0% | |
| TGTCGGTACTAAATAATTCT+AGG | + | chr4.4:20337059-20337078 | MS.gene028385:intron | 30.0% | |
| TTAAGTTAGTTAACTCGATC+AGG | + | chr4.4:20334145-20334164 | MS.gene028385:intron | 30.0% | |
| TTACCCATACCTATTCTTAT+AGG | - | chr4.4:20335392-20335411 | None:intergenic | 30.0% | |
| TTCTTGATGAAATTGTCTAC+TGG | - | chr4.4:20337595-20337614 | None:intergenic | 30.0% | |
| TTGAGTTACTTGTGAACTTA+CGG | - | chr4.4:20334929-20334948 | None:intergenic | 30.0% | |
| TTGATGAAGACACAAGATAT+GGG | + | chr4.4:20333648-20333667 | MS.gene028385:CDS | 30.0% | |
| TTGTAGGATCAAATAAACAG+CGG | + | chr4.4:20336518-20336537 | MS.gene028385:intron | 30.0% | |
| ! | AGGTTAATTCTGAAGACAAA+TGG | - | chr4.4:20335156-20335175 | None:intergenic | 30.0% |
| ! | ATTTGTTTGGCTCATATCTT+TGG | + | chr4.4:20337284-20337303 | MS.gene028385:intron | 30.0% |
| ! | CATATTCTTTTCTTCTCTCA+CGG | - | chr4.4:20336228-20336247 | None:intergenic | 30.0% |
| ! | CATGTTTGAAGCTTATCTAT+TGG | - | chr4.4:20333133-20333152 | None:intergenic | 30.0% |
| ! | GAATCATATTTTCATGCTAC+TGG | + | chr4.4:20337927-20337946 | MS.gene028385:intron | 30.0% |
| ! | GTTTTTCTTTTGTAGGAATG+AGG | + | chr4.4:20333596-20333615 | MS.gene028385:intron | 30.0% |
| ! | TAATGATGATGACATTGATG+AGG | - | chr4.4:20335040-20335059 | None:intergenic | 30.0% |
| ! | TCGCTTTCTGAAAATTTGTT+TGG | + | chr4.4:20337271-20337290 | MS.gene028385:intron | 30.0% |
| ! | TGACTACTTTCTATCCTTTT+CGG | + | chr4.4:20333294-20333313 | MS.gene028385:intron | 30.0% |
| ! | TTAAGGTGTTTATCCAAACA+TGG | - | chr4.4:20333320-20333339 | None:intergenic | 30.0% |
| ! | TTTTTGAACAGGATTGATGT+TGG | - | chr4.4:20336338-20336357 | None:intergenic | 30.0% |
| !! | AGTCAGGTTTTATCGAATAT+GGG | - | chr4.4:20336392-20336411 | None:intergenic | 30.0% |
| !! | ATGAACTTAGTCTTTCGTTT+TGG | - | chr4.4:20334904-20334923 | None:intergenic | 30.0% |
| !! | CTACTCCTTTCTTATTTCTA+TGG | + | chr4.4:20336466-20336485 | MS.gene028385:intron | 30.0% |
| !!! | AGTTGCAGGTATTGATATTT+TGG | + | chr4.4:20338218-20338237 | MS.gene028385:intron | 30.0% |
| !!! | CAGGCTTCTAAATTTTTTGT+CGG | + | chr4.4:20337042-20337061 | MS.gene028385:intron | 30.0% |
| !!! | CATTCGTTCTTTTTTCATCT+TGG | + | chr4.4:20338053-20338072 | MS.gene028385:intron | 30.0% |
| !!! | GCTATTAGTTTTCTGCTTTT+TGG | + | chr4.4:20337897-20337916 | MS.gene028385:intron | 30.0% |
| !!! | GTTGTTGGTTTTTCTTTTGT+AGG | + | chr4.4:20333589-20333608 | MS.gene028385:intron | 30.0% |
| !!! | TTTTTTGTAGTAGGATGATG+GGG | + | chr4.4:20335974-20335993 | MS.gene028385:intron | 30.0% |
| AAAAGCTGCTAATAGAAACG+AGG | + | chr4.4:20332810-20332829 | MS.gene028385:CDS | 35.0% | |
| AAAAGGTAAAGCCCTACATT+TGG | + | chr4.4:20336964-20336983 | MS.gene028385:intron | 35.0% | |
| AAGTAACAAGAATACAGGAG+AGG | - | chr4.4:20336794-20336813 | None:intergenic | 35.0% | |
| AAGTTTGACGTGAAGTTCAT+CGG | - | chr4.4:20335325-20335344 | None:intergenic | 35.0% | |
| AATAGAACAGAGGATGAACT+CGG | + | chr4.4:20336072-20336091 | MS.gene028385:intron | 35.0% | |
| AATCAGCTATTCATATGAGG+AGG | - | chr4.4:20335176-20335195 | None:intergenic | 35.0% | |
| AATGTTGGCGGTCATAATTA+GGG | + | chr4.4:20337817-20337836 | MS.gene028385:intron | 35.0% | |
| ACGCCTATAAGAATAGGTAT+GGG | + | chr4.4:20335386-20335405 | MS.gene028385:intron | 35.0% | |
| AGAGAAAGTCTACATGGATA+TGG | + | chr4.4:20338183-20338202 | MS.gene028385:CDS | 35.0% | |
| AGAGCAAACCATTGCAATTA+TGG | + | chr4.4:20335357-20335376 | MS.gene028385:intron | 35.0% | |
| AGTAACAAGAATACAGGAGA+GGG | - | chr4.4:20336793-20336812 | None:intergenic | 35.0% | |
| AGTCTTCAAAGCCAAATGTA+GGG | - | chr4.4:20336978-20336997 | None:intergenic | 35.0% | |
| AGTGTCTTCTTTCACATGAA+AGG | - | chr4.4:20332678-20332697 | None:intergenic | 35.0% | |
| ATACAACTATAGAGGGACAA+AGG | - | chr4.4:20334001-20334020 | None:intergenic | 35.0% | |
| ATAGGGTGTGATTACTATTG+AGG | - | chr4.4:20337346-20337365 | None:intergenic | 35.0% | |
| ATCAGGAATATTGTCAGAAG+TGG | - | chr4.4:20336938-20336957 | None:intergenic | 35.0% | |
| ATGCTGTAAGCTGCAAATTA+AGG | - | chr4.4:20333337-20333356 | None:intergenic | 35.0% | |
| ATTAGGGAGATTGAATGTTG+TGG | + | chr4.4:20337783-20337802 | MS.gene028385:intron | 35.0% | |
| ATTTGCACGCCTATAAGAAT+AGG | + | chr4.4:20335380-20335399 | MS.gene028385:intron | 35.0% | |
| CAATCGTGAATATCTCTTTG+TGG | - | chr4.4:20335748-20335767 | None:intergenic | 35.0% | |
| CAGATTATAAGTAAGGGGTT+TGG | + | chr4.4:20336011-20336030 | MS.gene028385:intron | 35.0% | |
| CCATTATTATTAGGTCTTCG+AGG | + | chr4.4:20332600-20332619 | MS.gene028385:intron | 35.0% | |
| CCTCGAAGACCTAATAATAA+TGG | - | chr4.4:20332603-20332622 | None:intergenic | 35.0% | |
| CGGAGATGAAAAAATTGCAA+TGG | - | chr4.4:20337212-20337231 | None:intergenic | 35.0% | |
| CTGTTCTATTCCTCTGTAAA+TGG | - | chr4.4:20336062-20336081 | None:intergenic | 35.0% | |
| GAAGTGTAGGCAATAGTTTA+GGG | + | chr4.4:20333222-20333241 | MS.gene028385:intron | 35.0% | |
| GAATGTTCATATCTGAGCAA+TGG | + | chr4.4:20335939-20335958 | MS.gene028385:intron | 35.0% | |
| GATGCCCATAGAAATAAGAA+AGG | - | chr4.4:20336474-20336493 | None:intergenic | 35.0% | |
| GATTATAAGTAAGGGGTTTG+GGG | + | chr4.4:20336013-20336032 | MS.gene028385:intron | 35.0% | |
| GTGCAAATCCATAATTGCAA+TGG | - | chr4.4:20335368-20335387 | None:intergenic | 35.0% | |
| GTTTCAATCACAGGTACTTA+GGG | + | chr4.4:20332786-20332805 | MS.gene028385:intron | 35.0% | |
| TAGGGACTAAATTGAAGTGT+AGG | + | chr4.4:20333209-20333228 | MS.gene028385:intron | 35.0% | |
| TCAAACCTTGTGTTTGGATA+GGG | - | chr4.4:20337363-20337382 | None:intergenic | 35.0% | |
| TCTCAAAATCTCCCAACATT+GGG | - | chr4.4:20335712-20335731 | None:intergenic | 35.0% | |
| TGAAGTGTAGGCAATAGTTT+AGG | + | chr4.4:20333221-20333240 | MS.gene028385:intron | 35.0% | |
| TGATTACTATTGAGGCTTCA+TGG | - | chr4.4:20337338-20337357 | None:intergenic | 35.0% | |
| TGGTCTACTTAAATCTTCGT+GGG | + | chr4.4:20333971-20333990 | MS.gene028385:intron | 35.0% | |
| TGTGAAAGAAGACACTTTAC+GGG | + | chr4.4:20332682-20332701 | MS.gene028385:CDS | 35.0% | |
| TGTTTCAATCACAGGTACTT+AGG | + | chr4.4:20332785-20332804 | MS.gene028385:intron | 35.0% | |
| TTCTCAAAATCTCCCAACAT+TGG | - | chr4.4:20335713-20335732 | None:intergenic | 35.0% | |
| TTGCATCATTTCACTAAAGC+CGG | + | chr4.4:20335830-20335849 | MS.gene028385:intron | 35.0% | |
| TTGGTCTACTTAAATCTTCG+TGG | + | chr4.4:20333970-20333989 | MS.gene028385:intron | 35.0% | |
| TTTACAGAGGAATAGAACAG+AGG | + | chr4.4:20336062-20336081 | MS.gene028385:intron | 35.0% | |
| TTTCATAAGCTATCTTGGTG+AGG | + | chr4.4:20333408-20333427 | MS.gene028385:intron | 35.0% | |
| ! | ACAGACCCTTGATTTTTATG+TGG | + | chr4.4:20333548-20333567 | MS.gene028385:intron | 35.0% |
| ! | ACTAAAACGGGCTCATAATA+AGG | - | chr4.4:20338249-20338268 | None:intergenic | 35.0% |
| ! | AGCTGTTTCATAAGCTATCT+TGG | + | chr4.4:20333403-20333422 | MS.gene028385:intron | 35.0% |
| ! | GATGTTTTCTGTGATTACAC+AGG | + | chr4.4:20337023-20337042 | MS.gene028385:intron | 35.0% |
| ! | GATTGATGTTGGTCAGATTT+TGG | - | chr4.4:20336327-20336346 | None:intergenic | 35.0% |
| ! | TAGCTTTTCAACTTTCTGCA+AGG | - | chr4.4:20333802-20333821 | None:intergenic | 35.0% |
| !! | ATTGTAATGGACACACCAAA+GGG | - | chr4.4:20337236-20337255 | None:intergenic | 35.0% |
| !! | CAGTCAGGTTTTATCGAATA+TGG | - | chr4.4:20336393-20336412 | None:intergenic | 35.0% |
| !! | GTGAATGACCGTATTGATTT+GGG | - | chr4.4:20335003-20335022 | None:intergenic | 35.0% |
| !! | TGAAGGAGATTGCTTGTTAT+TGG | + | chr4.4:20337638-20337657 | MS.gene028385:intron | 35.0% |
| !! | TGTGAATGACCGTATTGATT+TGG | - | chr4.4:20335004-20335023 | None:intergenic | 35.0% |
| !! | TGTTGGTCAGATTTTGGAAA+AGG | - | chr4.4:20336321-20336340 | None:intergenic | 35.0% |
| !!! | ATATAGTTTTTTCCGACGGT+AGG | - | chr4.4:20334258-20334277 | None:intergenic | 35.0% |
| !!! | CTTGGTGAGGTTTTGAATTA+AGG | + | chr4.4:20333421-20333440 | MS.gene028385:intron | 35.0% |
| !!! | GCATTTTTCATTGACTCCTT+GGG | + | chr4.4:20337439-20337458 | MS.gene028385:intron | 35.0% |
| !!! | GCTATTTTTGCAAGCTATCT+CGG | + | chr4.4:20333017-20333036 | MS.gene028385:intron | 35.0% |
| AAACACAAGGTTTGAGGATG+TGG | + | chr4.4:20337368-20337387 | MS.gene028385:intron | 40.0% | |
| AAGATGCTTGATCGACAGTA+AGG | + | chr4.4:20335904-20335923 | MS.gene028385:intron | 40.0% | |
| AAGTAAACATGCTTGTTCGC+TGG | - | chr4.4:20333855-20333874 | None:intergenic | 40.0% | |
| ACAAAATCGAGATCCTATGC+AGG | + | chr4.4:20334448-20334467 | MS.gene028385:intron | 40.0% | |
| ACAATGACTTTGCCCAATGA+AGG | - | chr4.4:20336718-20336737 | None:intergenic | 40.0% | |
| ACATCCTCAAACCTTGTGTT+TGG | - | chr4.4:20337369-20337388 | None:intergenic | 40.0% | |
| ACTGATGCTAACCATCAACT+TGG | - | chr4.4:20333249-20333268 | None:intergenic | 40.0% | |
| ACTGTCGATCAAGCATCTTA+AGG | - | chr4.4:20335903-20335922 | None:intergenic | 40.0% | |
| AGATGCTTGATCGACAGTAA+GGG | + | chr4.4:20335905-20335924 | MS.gene028385:intron | 40.0% | |
| AGATGGATCAGGTTTCATAC+TGG | + | chr4.4:20337726-20337745 | MS.gene028385:intron | 40.0% | |
| AGATGTAAGGTCCCTTCATT+GGG | + | chr4.4:20336703-20336722 | MS.gene028385:intron | 40.0% | |
| AGGATAGAAAGTAGTCACAC+TGG | - | chr4.4:20333291-20333310 | None:intergenic | 40.0% | |
| AGGATCAAATAAACAGCGGT+TGG | + | chr4.4:20336522-20336541 | MS.gene028385:intron | 40.0% | |
| AGGGTTACAAGATCGTGAAT+CGG | + | chr4.4:20334479-20334498 | MS.gene028385:intron | 40.0% | |
| AGGTCTTCGAGGAAGAAATT+CGG | + | chr4.4:20332611-20332630 | MS.gene028385:intron | 40.0% | |
| ATAGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20335398-20335417 | MS.gene028385:intron | 40.0% | |
| ATCAGGTTTCATACTGGTGA+GGG | + | chr4.4:20337732-20337751 | MS.gene028385:intron | 40.0% | |
| ATGAAGACATCTTACACCAC+TGG | - | chr4.4:20335102-20335121 | None:intergenic | 40.0% | |
| ATGGGTAAGGTAACTGGTAT+GGG | + | chr4.4:20335404-20335423 | MS.gene028385:intron | 40.0% | |
| ATGTTTACTTTGCTGACGAC+AGG | + | chr4.4:20333865-20333884 | MS.gene028385:CDS | 40.0% | |
| CAAATGGCTTGAGAATGTGA+AGG | - | chr4.4:20335140-20335159 | None:intergenic | 40.0% | |
| CAATGACTTTGCCCAATGAA+GGG | - | chr4.4:20336717-20336736 | None:intergenic | 40.0% | |
| CACGCCTATAAGAATAGGTA+TGG | + | chr4.4:20335385-20335404 | MS.gene028385:intron | 40.0% | |
| CATTGTTCGGATTTGATGGA+TGG | + | chr4.4:20334058-20334077 | MS.gene028385:intron | 40.0% | |
| CCATTGCTGACAATATAACG+AGG | + | chr4.4:20336181-20336200 | MS.gene028385:intron | 40.0% | |
| CCTCGTTATATTGTCAGCAA+TGG | - | chr4.4:20336184-20336203 | None:intergenic | 40.0% | |
| CTATCCAAACACAAGGTTTG+AGG | + | chr4.4:20337362-20337381 | MS.gene028385:intron | 40.0% | |
| CTCAAACCTTGTGTTTGGAT+AGG | - | chr4.4:20337364-20337383 | None:intergenic | 40.0% | |
| CTTACAAAGAGTTGCAAGCA+AGG | + | chr4.4:20338140-20338159 | MS.gene028385:CDS | 40.0% | |
| GAATGTTGGCGGTCATAATT+AGG | + | chr4.4:20337816-20337835 | MS.gene028385:intron | 40.0% | |
| GACTGTAACCAACTTGTGAT+CGG | + | chr4.4:20336408-20336427 | MS.gene028385:intron | 40.0% | |
| GAGGAAGAGAAAGAGAGTTA+CGG | - | chr4.4:20332533-20332552 | None:intergenic | 40.0% | |
| GAGTCAGCCAATCATTGTAA+TGG | - | chr4.4:20337249-20337268 | None:intergenic | 40.0% | |
| GAGTCTTCAAAGCCAAATGT+AGG | - | chr4.4:20336979-20336998 | None:intergenic | 40.0% | |
| GATGAACTTCACGTCAAACT+TGG | + | chr4.4:20335324-20335343 | MS.gene028385:intron | 40.0% | |
| GCAGTTGCTACATACAATAC+AGG | - | chr4.4:20337994-20338013 | None:intergenic | 40.0% | |
| GGAAAATACTATCCACTGCT+TGG | + | chr4.4:20336034-20336053 | MS.gene028385:intron | 40.0% | |
| GGAATATTGTCAGAAGTGGA+TGG | - | chr4.4:20336934-20336953 | None:intergenic | 40.0% | |
| GGATCAAATAAACAGCGGTT+GGG | + | chr4.4:20336523-20336542 | MS.gene028385:intron | 40.0% | |
| GGTGTGTCCATTACAATGAT+TGG | + | chr4.4:20337239-20337258 | MS.gene028385:intron | 40.0% | |
| GTAACAAGAATACAGGAGAG+GGG | - | chr4.4:20336792-20336811 | None:intergenic | 40.0% | |
| GTGAATATCTCTTTGTGGAG+AGG | - | chr4.4:20335743-20335762 | None:intergenic | 40.0% | |
| TAAGAAAGGAGTAGGATCAC+TGG | - | chr4.4:20336460-20336479 | None:intergenic | 40.0% | |
| TAAGGTAACTGGTACGATAG+TGG | + | chr4.4:20335427-20335446 | MS.gene028385:intron | 40.0% | |
| TAAGGTAACTGGTATGGGTA+AGG | + | chr4.4:20335409-20335428 | MS.gene028385:intron | 40.0% | |
| TACATGCGGAATCGTATACA+TGG | - | chr4.4:20336629-20336648 | None:intergenic | 40.0% | |
| TAGATGTAAGGTCCCTTCAT+TGG | + | chr4.4:20336702-20336721 | MS.gene028385:intron | 40.0% | |
| TATGATCATTCAACCCCTCT+CGG | - | chr4.4:20334231-20334250 | None:intergenic | 40.0% | |
| TATGGGTAAGGTAACTGGTA+TGG | + | chr4.4:20335403-20335422 | MS.gene028385:intron | 40.0% | |
| TCCAACATCAACCCAATGTT+GGG | + | chr4.4:20335698-20335717 | MS.gene028385:intron | 40.0% | |
| TCGGCAAGCTTGTGAAAATA+AGG | + | chr4.4:20333036-20333055 | MS.gene028385:intron | 40.0% | |
| TGATCATAACATCCTACCGT+CGG | + | chr4.4:20334243-20334262 | MS.gene028385:intron | 40.0% | |
| TGATGACATTGATGAGGATG+AGG | - | chr4.4:20335034-20335053 | None:intergenic | 40.0% | |
| TGTCTATCAAATGCTACCCA+AGG | - | chr4.4:20337458-20337477 | None:intergenic | 40.0% | |
| TTATCAAGACCTTGCCGAAA+AGG | - | chr4.4:20332917-20332936 | None:intergenic | 40.0% | |
| TTATCCAAACATGGCCGAAA+AGG | - | chr4.4:20333311-20333330 | None:intergenic | 40.0% | |
| TTCTCACAAAGCTGTAACCA+AGG | + | chr4.4:20334422-20334441 | MS.gene028385:intron | 40.0% | |
| ! | ACATTTCTAGAAATCCGGCA+TGG | - | chr4.4:20338088-20338107 | None:intergenic | 40.0% |
| ! | ACTTTCTATCCTTTTCGGCA+AGG | + | chr4.4:20332905-20332924 | MS.gene028385:intron | 40.0% |
| ! | AGGCTATTGATGCTGATTGA+TGG | + | chr4.4:20334165-20334184 | MS.gene028385:intron | 40.0% |
| ! | GATCTCGATTTTGTCTACCT+TGG | - | chr4.4:20334442-20334461 | None:intergenic | 40.0% |
| ! | GGCTATTGATGCTGATTGAT+GGG | + | chr4.4:20334166-20334185 | MS.gene028385:intron | 40.0% |
| ! | TAGTTTAGGGACCAAGTTGA+TGG | + | chr4.4:20333235-20333254 | MS.gene028385:intron | 40.0% |
| !! | AATTGCAATGGTTTGCTCTG+TGG | - | chr4.4:20335356-20335375 | None:intergenic | 40.0% |
| !! | ATCACAAGTTGGTTACAGTC+AGG | - | chr4.4:20336408-20336427 | None:intergenic | 40.0% |
| !! | ATTGCAATGGTTTGCTCTGT+GGG | - | chr4.4:20335355-20335374 | None:intergenic | 40.0% |
| !! | CATAGAGGTACTTGGATTGT+AGG | + | chr4.4:20336502-20336521 | MS.gene028385:intron | 40.0% |
| !! | CATTGTAATGGACACACCAA+AGG | - | chr4.4:20337237-20337256 | None:intergenic | 40.0% |
| !! | GATTGCTTGTTATTGGTGAC+TGG | + | chr4.4:20337645-20337664 | MS.gene028385:intron | 40.0% |
| !! | GGTTTTATCGAATATGGGAC+AGG | - | chr4.4:20336387-20336406 | None:intergenic | 40.0% |
| !!! | GGCATTTTTCATTGACTCCT+TGG | + | chr4.4:20337438-20337457 | MS.gene028385:intron | 40.0% |
| !!! | TTTTTTCATCTCCGACCCTT+TGG | + | chr4.4:20337218-20337237 | MS.gene028385:intron | 40.0% |
| ACTCAGTCGAGCTTATCTAC+TGG | - | chr4.4:20333520-20333539 | None:intergenic | 45.0% | |
| ACTGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20335416-20335435 | MS.gene028385:intron | 45.0% | |
| AGATTCTACCTATGACCGAG+AGG | + | chr4.4:20334213-20334232 | MS.gene028385:intron | 45.0% | |
| AGCAGGTCTAATCAAGTCTC+CGG | - | chr4.4:20335852-20335871 | None:intergenic | 45.0% | |
| AGGAACAAACAAACCCGTAG+AGG | + | chr4.4:20336143-20336162 | MS.gene028385:intron | 45.0% | |
| ATCATGACATTCCCTCAGGA+AGG | - | chr4.4:20337545-20337564 | None:intergenic | 45.0% | |
| ATCATGCGCGAGAGATGAAA+TGG | + | chr4.4:20336281-20336300 | MS.gene028385:intron | 45.0% | |
| ATCCATCATGACATTCCCTC+AGG | - | chr4.4:20337549-20337568 | None:intergenic | 45.0% | |
| ATCGAGATCCTATGCAGGAT+CGG | + | chr4.4:20334453-20334472 | MS.gene028385:intron | 45.0% | |
| ATTCTACCTATGACCGAGAG+GGG | + | chr4.4:20334215-20334234 | MS.gene028385:intron | 45.0% | |
| CCAGCTAGAGAAAGTCTACA+TGG | + | chr4.4:20338177-20338196 | MS.gene028385:CDS | 45.0% | |
| CCATGTAGACTTTCTCTAGC+TGG | - | chr4.4:20338180-20338199 | None:intergenic | 45.0% | |
| CGCTTACAATCATCTGCTTG+TGG | + | chr4.4:20335651-20335670 | MS.gene028385:intron | 45.0% | |
| CTCCAACATCAACCCAATGT+TGG | + | chr4.4:20335697-20335716 | MS.gene028385:intron | 45.0% | |
| GAGAAAGAGAGTTACGGTTG+AGG | - | chr4.4:20332527-20332546 | None:intergenic | 45.0% | |
| GATCAGGTTTCATACTGGTG+AGG | + | chr4.4:20337731-20337750 | MS.gene028385:intron | 45.0% | |
| GATGAAATCGTCAACCCAAC+CGG | + | chr4.4:20338347-20338366 | MS.gene028385:CDS | 45.0% | |
| GATGCTTGATCGACAGTAAG+GGG | + | chr4.4:20335906-20335925 | MS.gene028385:intron | 45.0% | |
| GATTCTACCTATGACCGAGA+GGG | + | chr4.4:20334214-20334233 | MS.gene028385:intron | 45.0% | |
| GGAACAAACAAACCCGTAGA+GGG | + | chr4.4:20336144-20336163 | MS.gene028385:intron | 45.0% | |
| GGTCTTCGAGGAAGAAATTC+GGG | + | chr4.4:20332612-20332631 | MS.gene028385:intron | 45.0% | |
| GTAGCTAGACAGAATGTTGG+CGG | + | chr4.4:20337805-20337824 | MS.gene028385:intron | 45.0% | |
| GTCTACTGGATCAACTCTGA+TGG | - | chr4.4:20337581-20337600 | None:intergenic | 45.0% | |
| GTGGAAAAACGAGTAGAAGC+AGG | - | chr4.4:20335869-20335888 | None:intergenic | 45.0% | |
| GTGGTAGCTAGACAGAATGT+TGG | + | chr4.4:20337802-20337821 | MS.gene028385:intron | 45.0% | |
| GTTACAAGATCGTGAATCGG+AGG | + | chr4.4:20334482-20334501 | MS.gene028385:intron | 45.0% | |
| GTTTGTTTGTTCCTGGCATG+TGG | - | chr4.4:20336137-20336156 | None:intergenic | 45.0% | |
| TCACACCCTATCCAAACACA+AGG | + | chr4.4:20337355-20337374 | MS.gene028385:intron | 45.0% | |
| TCAGGTTTCATACTGGTGAG+GGG | + | chr4.4:20337733-20337752 | MS.gene028385:intron | 45.0% | |
| TCCATCTACAACCTAAGCTC+TGG | - | chr4.4:20337713-20337732 | None:intergenic | 45.0% | |
| TGAATCGGAGGATCGTAACA+CGG | + | chr4.4:20334494-20334513 | MS.gene028385:intron | 45.0% | |
| TGACATTGATGAGGATGAGG+AGG | - | chr4.4:20335031-20335050 | None:intergenic | 45.0% | |
| TGTGATCACCGATCACAAGT+TGG | - | chr4.4:20336419-20336438 | None:intergenic | 45.0% | |
| TTCCTGAGGGAATGTCATGA+TGG | + | chr4.4:20337544-20337563 | MS.gene028385:intron | 45.0% | |
| ! | AACTCGGTGAACTGAAACAG+TGG | + | chr4.4:20336088-20336107 | MS.gene028385:intron | 45.0% |
| ! | ACCAGAGCTTAGGTTGTAGA+TGG | + | chr4.4:20337709-20337728 | MS.gene028385:intron | 45.0% |
| ! | CATGGATATGGCACTGAAGA+AGG | + | chr4.4:20338195-20338214 | MS.gene028385:CDS | 45.0% |
| ! | CTATCCTTTTCGGCCATGTT+TGG | + | chr4.4:20333304-20333323 | MS.gene028385:intron | 45.0% |
| ! | GCTTAGGTTGTAGATGGATC+AGG | + | chr4.4:20337715-20337734 | MS.gene028385:intron | 45.0% |
| ! | TAATGGACACACCAAAGGGT+CGG | - | chr4.4:20337232-20337251 | None:intergenic | 45.0% |
| ! | TCTACGGGTTTGTTTGTTCC+TGG | - | chr4.4:20336144-20336163 | None:intergenic | 45.0% |
| !! | ACTGCTGTACTAGGTTGGTT+TGG | + | chr4.4:20337757-20337776 | MS.gene028385:intron | 45.0% |
| !! | CAACATTGGGTTGATGTTGG+AGG | - | chr4.4:20335699-20335718 | None:intergenic | 45.0% |
| !! | CTGCTGTACTAGGTTGGTTT+GGG | + | chr4.4:20337758-20337777 | MS.gene028385:intron | 45.0% |
| !! | CTTGTTATTGGTGACTGGCA+AGG | + | chr4.4:20337650-20337669 | MS.gene028385:intron | 45.0% |
| !! | GTAACACGCATAGAGGTACT+TGG | + | chr4.4:20336494-20336513 | MS.gene028385:intron | 45.0% |
| !! | TAGGTTGGTTTGGGGGATTA+GGG | + | chr4.4:20337767-20337786 | MS.gene028385:intron | 45.0% |
| !! | TCCCAACATTGGGTTGATGT+TGG | - | chr4.4:20335702-20335721 | None:intergenic | 45.0% |
| !! | TCGAATAAGGAGTGCCAACA+TGG | + | chr4.4:20337518-20337537 | MS.gene028385:intron | 45.0% |
| !! | TCTTACACCACTGGTGTTGT+TGG | - | chr4.4:20335093-20335112 | None:intergenic | 45.0% |
| !! | TGCTGTACTAGGTTGGTTTG+GGG | + | chr4.4:20337759-20337778 | MS.gene028385:intron | 45.0% |
| !!! | TGGTGTTGTTGGCGACTTTT+TGG | - | chr4.4:20335082-20335101 | None:intergenic | 45.0% |
| AAAGTCGCCAACAACACCAG+TGG | + | chr4.4:20335083-20335102 | MS.gene028385:intron | 50.0% | |
| AAGCAGAAGAACCACATGCC+AGG | + | chr4.4:20336123-20336142 | MS.gene028385:intron | 50.0% | |
| AGAATACAGGAGAGGGGAGA+AGG | - | chr4.4:20336786-20336805 | None:intergenic | 50.0% | |
| ATTCAACCCCTCTCGGTCAT+AGG | - | chr4.4:20334224-20334243 | None:intergenic | 50.0% | |
| CCACTTGTATACCGGTCTAC+CGG | - | chr4.4:20338369-20338388 | None:intergenic | 50.0% | |
| CTGCTTGGAGCCATTTACAG+AGG | + | chr4.4:20336049-20336068 | MS.gene028385:intron | 50.0% | |
| CTGTAAATGGCTCCAAGCAG+TGG | - | chr4.4:20336049-20336068 | None:intergenic | 50.0% | |
| GAATACAGGAGAGGGGAGAA+GGG | - | chr4.4:20336785-20336804 | None:intergenic | 50.0% | |
| TAGAAATCCGGCATGGTGCT+GGG | - | chr4.4:20338081-20338100 | None:intergenic | 50.0% | |
| TCAGCACGCCACTTGTATAC+CGG | - | chr4.4:20338377-20338396 | None:intergenic | 50.0% | |
| TCGAGATCCTATGCAGGATC+GGG | + | chr4.4:20334454-20334473 | MS.gene028385:intron | 50.0% | |
| TGACTGGCAAGGAGGAACAA+GGG | + | chr4.4:20337661-20337680 | MS.gene028385:intron | 50.0% | |
| TTGTATACCGGTCTACCGGT+TGG | - | chr4.4:20338365-20338384 | None:intergenic | 50.0% | |
| TTTGTGAGCAGGTCTGGGAA+CGG | - | chr4.4:20332498-20332517 | None:intergenic | 50.0% | |
| ! | GTTATTGGTGACTGGCAAGG+AGG | + | chr4.4:20337653-20337672 | MS.gene028385:intron | 50.0% |
| ! | TGTATACCGGTCTACCGGTT+GGG | - | chr4.4:20338364-20338383 | None:intergenic | 50.0% |
| !! | ATGTCATGATGGATGCGAGG+AGG | + | chr4.4:20337555-20337574 | MS.gene028385:intron | 50.0% |
| !! | CTAGGTTGGTTTGGGGGATT+AGG | + | chr4.4:20337766-20337785 | MS.gene028385:intron | 50.0% |
| !! | GCTGTACTAGGTTGGTTTGG+GGG | + | chr4.4:20337760-20337779 | MS.gene028385:intron | 50.0% |
| !! | GGAATGTCATGATGGATGCG+AGG | + | chr4.4:20337552-20337571 | MS.gene028385:intron | 50.0% |
| AACAAACCCGTAGAGGGAGC+AGG | + | chr4.4:20336150-20336169 | MS.gene028385:intron | 55.0% | |
| AACACTGCCTGCTCCCTCTA+CGG | - | chr4.4:20336160-20336179 | None:intergenic | 55.0% | |
| ACGCTCTTTGTGAGCAGGTC+TGG | - | chr4.4:20332504-20332523 | None:intergenic | 55.0% | |
| ACTGGCAAGGAGGAACAAGG+GGG | + | chr4.4:20337663-20337682 | MS.gene028385:intron | 55.0% | |
| ATCCTATGCAGGATCGGGGA+AGG | + | chr4.4:20334459-20334478 | MS.gene028385:intron | 55.0% | |
| CCGGTAGACCGGTATACAAG+TGG | + | chr4.4:20338366-20338385 | MS.gene028385:CDS | 55.0% | |
| CGAGATCCTATGCAGGATCG+GGG | + | chr4.4:20334455-20334474 | MS.gene028385:intron | 55.0% | |
| CGCTCTTTGTGAGCAGGTCT+GGG | - | chr4.4:20332503-20332522 | None:intergenic | 55.0% | |
| CTAGAAATCCGGCATGGTGC+TGG | - | chr4.4:20338082-20338101 | None:intergenic | 55.0% | |
| GACTGGCAAGGAGGAACAAG+GGG | + | chr4.4:20337662-20337681 | MS.gene028385:intron | 55.0% | |
| GCAGTGCTTCACCAGAGCTT+AGG | + | chr4.4:20337699-20337718 | MS.gene028385:intron | 55.0% | |
| GCCAACATGGACCTTCCTGA+GGG | + | chr4.4:20337531-20337550 | MS.gene028385:intron | 55.0% | |
| GTGACTGGCAAGGAGGAACA+AGG | + | chr4.4:20337660-20337679 | MS.gene028385:intron | 55.0% | |
| TCCCTCAGGAAGGTCCATGT+TGG | - | chr4.4:20337535-20337554 | None:intergenic | 55.0% | |
| TCCTATGCAGGATCGGGGAA+GGG | + | chr4.4:20334460-20334479 | MS.gene028385:intron | 55.0% | |
| TGAGGACGCTCTTTGTGAGC+AGG | - | chr4.4:20332509-20332528 | None:intergenic | 55.0% | |
| TGCCAACATGGACCTTCCTG+AGG | + | chr4.4:20337530-20337549 | MS.gene028385:intron | 55.0% | |
| ! | GGCACTGAAGAAGGAGTTGC+AGG | + | chr4.4:20338204-20338223 | MS.gene028385:CDS | 55.0% |
| ! | GGGCATCGTAACACGCATAG+AGG | + | chr4.4:20336487-20336506 | MS.gene028385:intron | 55.0% |
| AACAAGGGGGTGGCAGGTCT+TGG | + | chr4.4:20337676-20337695 | MS.gene028385:intron | 60.0% | |
| ACAAGGGGGTGGCAGGTCTT+GGG | + | chr4.4:20337677-20337696 | MS.gene028385:intron | 60.0% | |
| ACACTGCCTGCTCCCTCTAC+GGG | - | chr4.4:20336159-20336178 | None:intergenic | 60.0% | |
| ACCCTTCCCCGATCCTGCAT+AGG | - | chr4.4:20334464-20334483 | None:intergenic | 60.0% | |
| CGTCAACCCAACCGGTAGAC+CGG | + | chr4.4:20338355-20338374 | MS.gene028385:CDS | 60.0% | |
| CTTGGTTCCCAGCACCATGC+CGG | + | chr4.4:20338071-20338090 | MS.gene028385:intron | 60.0% | |
| !! | GGGGCACTGCTGTACTAGGT+TGG | + | chr4.4:20337752-20337771 | MS.gene028385:intron | 60.0% |
| !! | GTGAGGGGCACTGCTGTACT+AGG | + | chr4.4:20337748-20337767 | MS.gene028385:intron | 60.0% |
| AGGAGGAACAAGGGGGTGGC+AGG | + | chr4.4:20337670-20337689 | MS.gene028385:intron | 65.0% | |
| GGCAAGGAGGAACAAGGGGG+TGG | + | chr4.4:20337666-20337685 | MS.gene028385:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20332476 | 20338409 | 20332476 | ID=MS.gene028385 |
| chr4.4 | mRNA | 20332476 | 20338409 | 20332476 | ID=MS.gene028385.t1;Parent=MS.gene028385 |
| chr4.4 | exon | 20332476 | 20332531 | 20332476 | ID=MS.gene028385.t1.exon1;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20332476 | 20332531 | 20332476 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20332613 | 20332703 | 20332613 | ID=MS.gene028385.t1.exon2;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20332613 | 20332703 | 20332613 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20332799 | 20332890 | 20332799 | ID=MS.gene028385.t1.exon3;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20332799 | 20332890 | 20332799 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20333611 | 20333704 | 20333611 | ID=MS.gene028385.t1.exon4;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20333611 | 20333704 | 20333611 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20333807 | 20333886 | 20333807 | ID=MS.gene028385.t1.exon5;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20333807 | 20333886 | 20333807 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20336885 | 20336968 | 20336885 | ID=MS.gene028385.t1.exon6;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20336885 | 20336968 | 20336885 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20338126 | 20338225 | 20338126 | ID=MS.gene028385.t1.exon7;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20338126 | 20338225 | 20338126 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| chr4.4 | exon | 20338317 | 20338409 | 20338317 | ID=MS.gene028385.t1.exon8;Parent=MS.gene028385.t1 |
| chr4.4 | CDS | 20338317 | 20338409 | 20338317 | ID=cds.MS.gene028385.t1;Parent=MS.gene028385.t1 |
| Gene Sequence |
| Protein sequence |
