Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015586.t1 | XP_003611088.1 | 98.9 | 444 | 5 | 0 | 1 | 444 | 1 | 444 | 1.10E-243 | 852.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015586.t1 | O04658 | 81.8 | 444 | 81 | 0 | 1 | 444 | 1 | 444 | 1.4e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015586.t1 | G7KC30 | 98.9 | 444 | 5 | 0 | 1 | 444 | 1 | 444 | 7.9e-244 | 852.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015586.t1 | MTR_5g010260 | 98.081 | 521 | 10 | 0 | 1 | 521 | 1 | 521 | 0.0 | 1038 |
| MS.gene015586.t1 | MTR_4g070910 | 90.476 | 462 | 44 | 0 | 1 | 462 | 1 | 462 | 0.0 | 850 |
| MS.gene015586.t1 | MTR_4g103790 | 43.137 | 408 | 215 | 5 | 1 | 393 | 3 | 408 | 2.28e-102 | 318 |
| MS.gene015586.t1 | MTR_5g010290 | 77.536 | 138 | 29 | 1 | 26 | 161 | 9 | 146 | 4.73e-67 | 213 |
| MS.gene015586.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 34 | 256 | 1.27e-29 | 121 |
| MS.gene015586.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 95 | 317 | 1.89e-29 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015586.t1 | AT5G27120 | 81.208 | 447 | 84 | 0 | 1 | 447 | 1 | 447 | 0.0 | 764 |
| MS.gene015586.t1 | AT3G05060 | 80.537 | 447 | 87 | 0 | 1 | 447 | 2 | 448 | 0.0 | 761 |
| MS.gene015586.t1 | AT5G27140 | 63.380 | 426 | 120 | 3 | 1 | 425 | 1 | 391 | 0.0 | 521 |
| MS.gene015586.t1 | AT5G27140 | 58.163 | 490 | 141 | 6 | 1 | 485 | 1 | 431 | 0.0 | 518 |
| MS.gene015586.t1 | AT3G12860 | 43.171 | 410 | 212 | 6 | 1 | 393 | 3 | 408 | 1.22e-107 | 330 |
| MS.gene015586.t1 | AT1G56110 | 40.244 | 492 | 237 | 9 | 1 | 475 | 3 | 454 | 1.75e-104 | 323 |
| MS.gene015586.t1 | AT1G60170 | 28.972 | 214 | 152 | 0 | 159 | 372 | 95 | 308 | 5.12e-22 | 99.8 |
Find 112 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATATATAAGACCATATT+TGG | 0.164834 | 5.1:+3743146 | None:intergenic |
| ACTTCTTTACACAGGATTTA+TGG | 0.208613 | 5.1:-3744965 | MS.gene015586:intron |
| AAAGAAAGAAAAGAAGAAAA+AGG | 0.230780 | 5.1:-3742478 | MS.gene015586:CDS |
| AAAGAAGGAAAAGAAGAAAA+AGG | 0.264932 | 5.1:-3742598 | MS.gene015586:CDS |
| CCCAACCATAGCAGTCAAAT+TGG | 0.271023 | 5.1:+3743302 | None:intergenic |
| CTGATATATTCTCAAACTTC+TGG | 0.278126 | 5.1:+3744723 | None:intergenic |
| CAAAGACAGCATTGGCTATC+AGG | 0.281768 | 5.1:-3743062 | MS.gene015586:CDS |
| GAGCTGAGAAGGCTCTCTTT+AGG | 0.330425 | 5.1:-3743194 | MS.gene015586:CDS |
| AGAAGCAGCTGTGATATCTA+TGG | 0.331075 | 5.1:-3743448 | MS.gene015586:CDS |
| AGCTGAGAAGGCTCTCTTTA+GGG | 0.345329 | 5.1:-3743193 | MS.gene015586:CDS |
| GGTAGTACCGTGCAGATTCT+TGG | 0.357226 | 5.1:-3743216 | MS.gene015586:CDS |
| TTATCATATGCCTCTATCTT+GGG | 0.358705 | 5.1:+3742838 | None:intergenic |
| AGGAAAGCTTTCTGAAGTTC+AGG | 0.363092 | 5.1:-3745804 | MS.gene015586:intron |
| ACCATGATCGTCCAGGCTAT+TGG | 0.367547 | 5.1:-3744153 | MS.gene015586:CDS |
| TGAAGTTGGTGAACTAGATT+TGG | 0.368410 | 5.1:-3743421 | MS.gene015586:CDS |
| GCAGCTAGTTTGTTGATTGA+TGG | 0.370776 | 5.1:-3744689 | MS.gene015586:CDS |
| CTTATCATATGCCTCTATCT+TGG | 0.380405 | 5.1:+3742837 | None:intergenic |
| CAGTTGACGGAACTCATAAC+TGG | 0.386655 | 5.1:-3744420 | MS.gene015586:CDS |
| AATCTCGAAGGCAAAGAATT+AGG | 0.387421 | 5.1:-3742889 | MS.gene015586:CDS |
| AGAACTTACTAAAATCATTC+AGG | 0.388638 | 5.1:-3744055 | MS.gene015586:CDS |
| AAACATGCTACTCCCAAATA+TGG | 0.397940 | 5.1:-3743159 | MS.gene015586:CDS |
| ATATATCATGCATCATTGAT+TGG | 0.403489 | 5.1:-3743132 | MS.gene015586:CDS |
| CGCAAGGTCTGTCAAGTTGA+TGG | 0.404405 | 5.1:-3744019 | MS.gene015586:CDS |
| CTTCATTGAGCACTTTGAAA+AGG | 0.407262 | 5.1:+3745825 | None:intergenic |
| CGATTTGCGGGTTCTGCTAA+AGG | 0.412920 | 5.1:-3742865 | MS.gene015586:CDS |
| CCAATTTGACTGCTATGGTT+GGG | 0.414603 | 5.1:-3743302 | MS.gene015586:CDS |
| GCTATGGTTGGGGAGCTTGT+TGG | 0.416805 | 5.1:-3743291 | MS.gene015586:CDS |
| AAAGAATTAGGTCGATTTGC+GGG | 0.418834 | 5.1:-3742877 | MS.gene015586:CDS |
| TGTTCACAGCAATGCTGTTA+TGG | 0.427112 | 5.1:-3744466 | MS.gene015586:CDS |
| ACTTGACAGACCTTGCGTAT+TGG | 0.437943 | 5.1:+3744025 | None:intergenic |
| AAGGATAGAAAGAAGGGAGC+TGG | 0.441375 | 5.1:-3742817 | MS.gene015586:CDS |
| AGACATGGCTCCGATGAGCC+TGG | 0.442031 | 5.1:-3744385 | MS.gene015586:CDS |
| GCTGTAGCTGATACGAAGTT+GGG | 0.449844 | 5.1:-3744608 | MS.gene015586:CDS |
| AACAAAAGATATACCTTAGC+AGG | 0.456722 | 5.1:+3742781 | None:intergenic |
| TTCATTGAGCACTTTGAAAA+GGG | 0.457174 | 5.1:+3745826 | None:intergenic |
| GAAGTTGGGGACTATCATTA+AGG | 0.458948 | 5.1:-3744594 | MS.gene015586:CDS |
| AGTTCAAGGGCAAAATTTCT+CGG | 0.467618 | 5.1:-3743095 | MS.gene015586:CDS |
| CAGTGCGGATGCTGCAAGAA+AGG | 0.471034 | 5.1:-3744931 | MS.gene015586:intron |
| GGCTCTGTTCTCCAATCCCA+TGG | 0.476474 | 5.1:+3743008 | None:intergenic |
| CTTTCTTGCAGCATCCGCAC+TGG | 0.482863 | 5.1:+3744932 | None:intergenic |
| AGCTGTAGCTGATACGAAGT+TGG | 0.485755 | 5.1:-3744609 | MS.gene015586:CDS |
| TTGAAAAGGGCGAAACCCGC+AGG | 0.486202 | 5.1:+3745839 | None:intergenic |
| CAAGATAGAGGCATATGATA+AGG | 0.489790 | 5.1:-3742836 | MS.gene015586:CDS |
| GTGCTCGCCTCATTGCCCAT+GGG | 0.492711 | 5.1:-3743269 | MS.gene015586:CDS |
| ATATGATAAGGATAGAAAGA+AGG | 0.493507 | 5.1:-3742824 | MS.gene015586:CDS |
| CCAACCATAGCAGTCAAATT+GGG | 0.494028 | 5.1:+3743303 | None:intergenic |
| CAATTTGACTGCTATGGTTG+GGG | 0.494927 | 5.1:-3743301 | MS.gene015586:CDS |
| GATTTGCGGGTTCTGCTAAA+GGG | 0.495464 | 5.1:-3742864 | MS.gene015586:CDS |
| TGATATATAAGACCATATTT+GGG | 0.499043 | 5.1:+3743147 | None:intergenic |
| TGAAGACAACACCATGGGAT+TGG | 0.499977 | 5.1:-3743019 | MS.gene015586:CDS |
| CCCAATTTGACTGCTATGGT+TGG | 0.502179 | 5.1:-3743303 | MS.gene015586:CDS |
| TGCACCCAATTTGACTGCTA+TGG | 0.506074 | 5.1:-3743307 | MS.gene015586:CDS |
| GGTGCTCGCCTCATTGCCCA+TGG | 0.506735 | 5.1:-3743270 | MS.gene015586:CDS |
| TCTATGATTATCTAAAGAGC+AGG | 0.507685 | 5.1:-3743341 | MS.gene015586:CDS |
| AATTAGGTGGTCAAATTGAA+AGG | 0.512138 | 5.1:-3744749 | MS.gene015586:intron |
| CAAAGAATTAGGTCGATTTG+CGG | 0.513905 | 5.1:-3742878 | MS.gene015586:CDS |
| ACCAATAGCCTGGACGATCA+TGG | 0.522254 | 5.1:+3744152 | None:intergenic |
| GCAGATTCTTGGAGCTGAGA+AGG | 0.524438 | 5.1:-3743205 | MS.gene015586:CDS |
| AGCAGTCAAATTGGGTGCAA+TGG | 0.533807 | 5.1:+3743311 | None:intergenic |
| TAAAGGGAAGCCCAAGATAG+AGG | 0.536666 | 5.1:-3742848 | MS.gene015586:CDS |
| GACATGGCTCCGATGAGCCT+GGG | 0.541122 | 5.1:-3744384 | MS.gene015586:CDS |
| ATAAATCTTGCAAAGCAGCC+TGG | 0.545223 | 5.1:-3743237 | MS.gene015586:CDS |
| GGGTTCGAGAATGGTATGGC+TGG | 0.545668 | 5.1:-3744086 | MS.gene015586:CDS |
| ATGCCATGAGGGTTCGAGAA+TGG | 0.547091 | 5.1:-3744095 | MS.gene015586:CDS |
| TCAAGCAGCTCCAAAGTTCA+AGG | 0.549296 | 5.1:-3743109 | MS.gene015586:CDS |
| ATTCCGAAAGAGATAAAACT+TGG | 0.550920 | 5.1:+3743376 | None:intergenic |
| AGGTATTCGATTTCAGTTGA+CGG | 0.556860 | 5.1:-3744433 | MS.gene015586:CDS |
| CGTCGAGTAAACCAATAGCC+TGG | 0.559795 | 5.1:+3744142 | None:intergenic |
| TATGATAAGGATAGAAAGAA+GGG | 0.562992 | 5.1:-3742823 | MS.gene015586:CDS |
| AGAATCTGCACGGTACTACC+AGG | 0.563552 | 5.1:+3743219 | None:intergenic |
| GAAGCAGCTGTGATATCTAT+GGG | 0.568328 | 5.1:-3743447 | MS.gene015586:CDS |
| GCTATCAGGTGTGATGCACT+TGG | 0.570354 | 5.1:-3743048 | MS.gene015586:CDS |
| TGCAGCTTGAAGCGCGATTG+AGG | 0.572330 | 5.1:-3742912 | MS.gene015586:intron |
| GCAAGGTCTGTCAAGTTGAT+GGG | 0.574951 | 5.1:-3744018 | MS.gene015586:CDS |
| CTTTACACAGGATTTATGGA+AGG | 0.579685 | 5.1:-3744961 | MS.gene015586:intron |
| TGAAAAGGGCGAAACCCGCA+GGG | 0.581689 | 5.1:+3745840 | None:intergenic |
| GCTTGCTGCAAAGACAGCAT+TGG | 0.582410 | 5.1:-3743070 | MS.gene015586:CDS |
| TGCTCGCCTCATTGCCCATG+GGG | 0.582657 | 5.1:-3743268 | MS.gene015586:CDS |
| ATATCTATGGGTACTGAAGT+TGG | 0.583455 | 5.1:-3743435 | MS.gene015586:CDS |
| TGAGACAAACCCAGGCTCAT+CGG | 0.584661 | 5.1:+3744375 | None:intergenic |
| ACTTTGCAAGCTGATGTAGA+TGG | 0.587306 | 5.1:-3742432 | None:intergenic |
| ATACCATTCTCGAACCCTCA+TGG | 0.587900 | 5.1:+3744092 | None:intergenic |
| GATTGATGGAAAAGCTAGCA+AGG | 0.589549 | 5.1:-3744675 | MS.gene015586:CDS |
| GATAGAAAGAAGGGAGCTGG+AGG | 0.601173 | 5.1:-3742814 | MS.gene015586:CDS |
| GGTTGACACCATGATCGTCC+AGG | 0.612729 | 5.1:-3744160 | MS.gene015586:CDS |
| GTACTGTTTGAAACCCCTGC+GGG | 0.613719 | 5.1:-3745854 | MS.gene015586:CDS |
| AGGTGTGATGCACTTGGAGA+TGG | 0.614670 | 5.1:-3743042 | MS.gene015586:CDS |
| ATGTATTCAACTCTTTATCG+AGG | 0.616968 | 5.1:+3744118 | None:intergenic |
| GTTGAATACATATGCCATGA+GGG | 0.622022 | 5.1:-3744106 | MS.gene015586:CDS |
| CTCAGCTCCAAGAATCTGCA+CGG | 0.622477 | 5.1:+3743209 | None:intergenic |
| CAAGCAGCTCCAAAGTTCAA+GGG | 0.624371 | 5.1:-3743108 | MS.gene015586:CDS |
| ATGAGGGTTCGAGAATGGTA+TGG | 0.625343 | 5.1:-3744090 | MS.gene015586:CDS |
| GAATATATCAGAAGCTACAG+AGG | 0.630088 | 5.1:-3744711 | MS.gene015586:CDS |
| AGGACTGATAACTCCTGCTA+AGG | 0.630812 | 5.1:-3742794 | MS.gene015586:intron |
| TGGCCTCGCTGTTCAAGACA+TGG | 0.636384 | 5.1:-3744400 | MS.gene015586:CDS |
| GTTGAAGTTCAGTGCAGACA+AGG | 0.637677 | 5.1:-3744334 | MS.gene015586:intron |
| CTGTAGCTGATACGAAGTTG+GGG | 0.642131 | 5.1:-3744607 | MS.gene015586:CDS |
| ATAGACTATGAGACAAACCC+AGG | 0.642701 | 5.1:+3744367 | None:intergenic |
| AGGATAATATCCAATACGCA+AGG | 0.653312 | 5.1:-3744035 | MS.gene015586:CDS |
| GATGGTGAAGACAACACCAT+GGG | 0.656945 | 5.1:-3743024 | MS.gene015586:CDS |
| ATTGATGGAAAAGCTAGCAA+GGG | 0.667037 | 5.1:-3744674 | MS.gene015586:CDS |
| AGTTGAATACATATGCCATG+AGG | 0.670426 | 5.1:-3744107 | MS.gene015586:CDS |
| GGGATTGGAGAACAGAGCCA+AGG | 0.677522 | 5.1:-3743004 | MS.gene015586:intron |
| GCTCGCCTCATTGCCCATGG+GGG | 0.687875 | 5.1:-3743267 | MS.gene015586:CDS |
| GCGCGATTGAGGAATCTCGA+AGG | 0.689896 | 5.1:-3742901 | MS.gene015586:CDS |
| CATTATCACAATGAGCACGC+AGG | 0.694162 | 5.1:+3744639 | None:intergenic |
| GAAAAGGGCGAAACCCGCAG+GGG | 0.700713 | 5.1:+3745841 | None:intergenic |
| TGCAAAGCTTGATTTCTCCG+AGG | 0.702184 | 5.1:-3743980 | MS.gene015586:intron |
| GCTGTTATGGAGCTAATGCG+AGG | 0.708635 | 5.1:-3744453 | MS.gene015586:CDS |
| AGATGGTGAAGACAACACCA+TGG | 0.721514 | 5.1:-3743025 | MS.gene015586:CDS |
| GGTACTGTTTGAAACCCCTG+CGG | 0.734058 | 5.1:-3745855 | MS.gene015586:CDS |
| GAGCCATGTCTTGAACAGCG+AGG | 0.799226 | 5.1:+3744397 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTATTTGTTTAAAG+AGG | + | chr5.1:3744523-3744542 | None:intergenic | 10.0% |
| !!! | TTTTTTTCCAAAAAAAAAAA+AGG | + | chr5.1:3742764-3742783 | None:intergenic | 10.0% |
| !! | ACTGAGTAATTAAAATTTAA+GGG | + | chr5.1:3743046-3743065 | None:intergenic | 15.0% |
| !! | GATACAACTAAAAAAAAAAA+GGG | + | chr5.1:3742961-3742980 | None:intergenic | 15.0% |
| !! | TACTGAGTAATTAAAATTTA+AGG | + | chr5.1:3743047-3743066 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCGATAATTGAAT+CGG | + | chr5.1:3745616-3745635 | None:intergenic | 15.0% |
| !! | AAAGAAAGAAAAGAAGAAAA+AGG | - | chr5.1:3745815-3745834 | MS.gene015586:CDS | 20.0% |
| !! | ATGATATATAAGACCATATT+TGG | + | chr5.1:3745150-3745169 | None:intergenic | 20.0% |
| !! | ATGTAAAAGAGTAAAACAAT+TGG | + | chr5.1:3744367-3744386 | None:intergenic | 20.0% |
| !! | CAATTGAAGGATTTATAAAT+GGG | + | chr5.1:3743406-3743425 | None:intergenic | 20.0% |
| !! | GGATACAACTAAAAAAAAAA+AGG | + | chr5.1:3742962-3742981 | None:intergenic | 20.0% |
| !! | TATGAATTATAGTGATGTAT+GGG | - | chr5.1:3742990-3743009 | MS.gene015586:intron | 20.0% |
| !! | TGATAAAAAGAAAGAAAAGA+AGG | - | chr5.1:3745791-3745810 | MS.gene015586:intron | 20.0% |
| !! | TGATATATAAGACCATATTT+GGG | + | chr5.1:3745149-3745168 | None:intergenic | 20.0% |
| !! | TTCAAATTTCAAATGATCAT+CGG | + | chr5.1:3743128-3743147 | None:intergenic | 20.0% |
| !!! | CAAAAAAAAAAAAGGTGTAA+TGG | + | chr5.1:3742756-3742775 | None:intergenic | 20.0% |
| !!! | CAAAATCTGTAATATGTTTT+AGG | + | chr5.1:3744799-3744818 | None:intergenic | 20.0% |
| !!! | CATTACACCTTTTTTTTTTT+TGG | - | chr5.1:3742754-3742773 | MS.gene015586:intron | 20.0% |
| !!! | TGTAATATGTTTTAGGATAA+AGG | + | chr5.1:3744792-3744811 | None:intergenic | 20.0% |
| !!! | TTGTATCTTGTATGTTTTTA+AGG | - | chr5.1:3742693-3742712 | MS.gene015586:CDS | 20.0% |
| !!! | TTTGATTTACTCTTAAATCT+TGG | - | chr5.1:3744410-3744429 | MS.gene015586:CDS | 20.0% |
| ! | AAAAAAATCTGATTCTGCAA+TGG | - | chr5.1:3745629-3745648 | MS.gene015586:intron | 25.0% |
| ! | AAAAATGTGTAAGTGAAGTT+TGG | + | chr5.1:3745357-3745376 | None:intergenic | 25.0% |
| ! | AAACATCAAAAGTTTCTTAG+GGG | + | chr5.1:3743749-3743768 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAAAGGACAAAA+AGG | - | chr5.1:3745704-3745723 | MS.gene015586:intron | 25.0% |
| ! | AAAGAAGAAAAAGGAGAAAA+AGG | - | chr5.1:3745824-3745843 | MS.gene015586:CDS | 25.0% |
| ! | AAAGAAGGAAAAGAAGAAAA+AGG | - | chr5.1:3745695-3745714 | MS.gene015586:intron | 25.0% |
| ! | AAATCGATAAACATTTGCTT+CGG | + | chr5.1:3744036-3744055 | None:intergenic | 25.0% |
| ! | ACAAAAATCTAATACTGCAA+TGG | - | chr5.1:3745740-3745759 | MS.gene015586:intron | 25.0% |
| ! | ACTATAATTCATAGATCATG+AGG | + | chr5.1:3742983-3743002 | None:intergenic | 25.0% |
| ! | AGAACTTACTAAAATCATTC+AGG | - | chr5.1:3744238-3744257 | MS.gene015586:intron | 25.0% |
| ! | ATATATCATGCATCATTGAT+TGG | - | chr5.1:3745161-3745180 | MS.gene015586:intron | 25.0% |
| ! | ATATGATAAGGATAGAAAGA+AGG | - | chr5.1:3745469-3745488 | MS.gene015586:intron | 25.0% |
| ! | ATGAATTATAGTGATGTATG+GGG | - | chr5.1:3742991-3743010 | MS.gene015586:intron | 25.0% |
| ! | CAAACATCAAAAGTTTCTTA+GGG | + | chr5.1:3743750-3743769 | None:intergenic | 25.0% |
| ! | CTATGAATTATAGTGATGTA+TGG | - | chr5.1:3742989-3743008 | MS.gene015586:intron | 25.0% |
| ! | GCAATTGAAGGATTTATAAA+TGG | + | chr5.1:3743407-3743426 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr5.1:3744631-3744650 | MS.gene015586:CDS | 25.0% |
| ! | TACCTACATGATTGAAAATA+CGG | - | chr5.1:3744479-3744498 | MS.gene015586:CDS | 25.0% |
| ! | TATGATAAGGATAGAAAGAA+GGG | - | chr5.1:3745470-3745489 | MS.gene015586:intron | 25.0% |
| ! | TCAAACATCAAAAGTTTCTT+AGG | + | chr5.1:3743751-3743770 | None:intergenic | 25.0% |
| ! | TGATAAAAAGAAAGCAAAGA+AGG | - | chr5.1:3745680-3745699 | MS.gene015586:intron | 25.0% |
| ! | TGTGATGAAAAAAGATCAAA+TGG | + | chr5.1:3744746-3744765 | None:intergenic | 25.0% |
| !! | AGGTATATCTTTTGTTCATT+TGG | - | chr5.1:3745519-3745538 | MS.gene015586:intron | 25.0% |
| !! | TTGCATTTTCAGCTTATTTA+AGG | - | chr5.1:3742632-3742651 | MS.gene015586:CDS | 25.0% |
| !!! | GAACACTGTTTTTTTTTGTA+AGG | - | chr5.1:3742715-3742734 | MS.gene015586:intron | 25.0% |
| !!! | TGAATGATTTTAGTAAGTTC+TGG | + | chr5.1:3744239-3744258 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTTTCAATTGCAA+TGG | - | chr5.1:3742564-3742583 | MS.gene015586:CDS | 25.0% |
| !!! | TTTGTTCATTTGGTATTGAT+TGG | - | chr5.1:3745529-3745548 | MS.gene015586:intron | 25.0% |
| !!! | TTTTTTTTTCTTCTGATGTC+TGG | - | chr5.1:3744054-3744073 | MS.gene015586:CDS | 25.0% |
| AAAAAAAGGGTTGTGTTAAC+CGG | + | chr5.1:3742948-3742967 | None:intergenic | 30.0% | |
| AACAAAAGATATACCTTAGC+AGG | + | chr5.1:3745515-3745534 | None:intergenic | 30.0% | |
| AACATCAAAAGTTTCTTAGG+GGG | + | chr5.1:3743748-3743767 | None:intergenic | 30.0% | |
| AACCATTCGAAAAGATTTAG+AGG | + | chr5.1:3744671-3744690 | None:intergenic | 30.0% | |
| AAGTTTGGTATAACAACCAT+AGG | + | chr5.1:3745342-3745361 | None:intergenic | 30.0% | |
| AATTAGGTGGTCAAATTGAA+AGG | - | chr5.1:3743544-3743563 | MS.gene015586:intron | 30.0% | |
| ACTTCTTTACACAGGATTTA+TGG | - | chr5.1:3743328-3743347 | MS.gene015586:CDS | 30.0% | |
| AGTTTGGTATAACAACCATA+GGG | + | chr5.1:3745341-3745360 | None:intergenic | 30.0% | |
| ATGTAGGTAAAGAAAGAGTA+CGG | + | chr5.1:3744468-3744487 | None:intergenic | 30.0% | |
| ATGTATTCAACTCTTTATCG+AGG | + | chr5.1:3744178-3744197 | None:intergenic | 30.0% | |
| ATGTTGGCAATATTATGATG+GGG | - | chr5.1:3743437-3743456 | MS.gene015586:CDS | 30.0% | |
| ATTCCGAAAGAGATAAAACT+TGG | + | chr5.1:3744920-3744939 | None:intergenic | 30.0% | |
| ATTTGCAAACTTCTTTACAC+AGG | - | chr5.1:3743320-3743339 | MS.gene015586:CDS | 30.0% | |
| CTGATATATTCTCAAACTTC+TGG | + | chr5.1:3743573-3743592 | None:intergenic | 30.0% | |
| GACTATCATTAAGGAAAAAC+TGG | - | chr5.1:3743708-3743727 | MS.gene015586:intron | 30.0% | |
| GATGAAAAAAGATCAAATGG+AGG | + | chr5.1:3744743-3744762 | None:intergenic | 30.0% | |
| GATGTTGGCAATATTATGAT+GGG | - | chr5.1:3743436-3743455 | MS.gene015586:CDS | 30.0% | |
| GTTCATATTATAGTGAACTG+TGG | - | chr5.1:3743240-3743259 | MS.gene015586:CDS | 30.0% | |
| TCTATGATTATCTAAAGAGC+AGG | - | chr5.1:3744952-3744971 | MS.gene015586:CDS | 30.0% | |
| TGATGTTGGCAATATTATGA+TGG | - | chr5.1:3743435-3743454 | MS.gene015586:CDS | 30.0% | |
| TTATCATATGCCTCTATCTT+GGG | + | chr5.1:3745458-3745477 | None:intergenic | 30.0% | |
| TTTGTTTAAAGAGGAATCAC+AGG | + | chr5.1:3744514-3744533 | None:intergenic | 30.0% | |
| ! | AACCGTATTTTCAATCATGT+AGG | + | chr5.1:3744484-3744503 | None:intergenic | 30.0% |
| ! | CTGGATAAGGTATCTAAAAA+AGG | + | chr5.1:3742905-3742924 | None:intergenic | 30.0% |
| ! | GACAAATTGTATTTCTACCT+CGG | + | chr5.1:3744333-3744352 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.1:3744688-3744707 | MS.gene015586:CDS | 30.0% |
| ! | TCTAGTTTGTAATCTATCAG+AGG | - | chr5.1:3743072-3743091 | MS.gene015586:CDS | 30.0% |
| ! | TGGTTTTTGATAGAACACAA+TGG | + | chr5.1:3744627-3744646 | None:intergenic | 30.0% |
| ! | TTCATTGAGCACTTTGAAAA+GGG | + | chr5.1:3742470-3742489 | None:intergenic | 30.0% |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr5.1:3744678-3744697 | MS.gene015586:CDS | 30.0% |
| !! | CATATTACAGATTTTGACAG+AGG | - | chr5.1:3744803-3744822 | MS.gene015586:intron | 30.0% |
| !! | TGACCAAGTTTTATCTCTTT+CGG | - | chr5.1:3744914-3744933 | MS.gene015586:intron | 30.0% |
| AAACATGCTACTCCCAAATA+TGG | - | chr5.1:3745134-3745153 | MS.gene015586:intron | 35.0% | |
| AAAGGACAAAAAGGAAGAAG+AGG | - | chr5.1:3745713-3745732 | MS.gene015586:intron | 35.0% | |
| AAAGGAGAAAAAGGAAGAAG+AGG | - | chr5.1:3745833-3745852 | MS.gene015586:CDS | 35.0% | |
| AATCTCGAAGGCAAAGAATT+AGG | - | chr5.1:3745404-3745423 | MS.gene015586:intron | 35.0% | |
| AATTGCGTGTTTACTGATGT+TGG | - | chr5.1:3743421-3743440 | MS.gene015586:CDS | 35.0% | |
| ACCTAATTATGCATCACTTG+GGG | + | chr5.1:3743532-3743551 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr5.1:3744659-3744678 | None:intergenic | 35.0% | |
| AGGATAATATCCAATACGCA+AGG | - | chr5.1:3744258-3744277 | MS.gene015586:intron | 35.0% | |
| AGGTATTCGATTTCAGTTGA+CGG | - | chr5.1:3743860-3743879 | MS.gene015586:intron | 35.0% | |
| AGTTCAAGGGCAAAATTTCT+CGG | - | chr5.1:3745198-3745217 | MS.gene015586:intron | 35.0% | |
| AGTTGAATACATATGCCATG+AGG | - | chr5.1:3744186-3744205 | MS.gene015586:intron | 35.0% | |
| ATCAGATCATGAAAGAACGT+AGG | + | chr5.1:3743286-3743305 | None:intergenic | 35.0% | |
| ATCAGTAAACACGCAATTGA+AGG | + | chr5.1:3743419-3743438 | None:intergenic | 35.0% | |
| ATGATGTCTGATTCATGACT+TGG | - | chr5.1:3742609-3742628 | MS.gene015586:CDS | 35.0% | |
| ATTGATGGAAAAGCTAGCAA+GGG | - | chr5.1:3743619-3743638 | MS.gene015586:intron | 35.0% | |
| ATTTATTAAGCTACCCCCAT+GGG | + | chr5.1:3745042-3745061 | None:intergenic | 35.0% | |
| CACCTAATTATGCATCACTT+GGG | + | chr5.1:3743533-3743552 | None:intergenic | 35.0% | |
| CTTATCATATGCCTCTATCT+TGG | + | chr5.1:3745459-3745478 | None:intergenic | 35.0% | |
| CTTTACACAGGATTTATGGA+AGG | - | chr5.1:3743332-3743351 | MS.gene015586:CDS | 35.0% | |
| GAATATATCAGAAGCTACAG+AGG | - | chr5.1:3743582-3743601 | MS.gene015586:intron | 35.0% | |
| GAGTAAAACAATTGGCAACA+CGG | + | chr5.1:3744359-3744378 | None:intergenic | 35.0% | |
| GTTGAATACATATGCCATGA+GGG | - | chr5.1:3744187-3744206 | MS.gene015586:intron | 35.0% | |
| TCAAAGTACAACAAGTACCT+TGG | + | chr5.1:3745309-3745328 | None:intergenic | 35.0% | |
| TCTGGTACATTCTGATTCTT+TGG | - | chr5.1:3744072-3744091 | MS.gene015586:CDS | 35.0% | |
| ! | ACACTTTCGATTAGAAGTGT+CGG | - | chr5.1:3743209-3743228 | MS.gene015586:CDS | 35.0% |
| ! | CAAGATAGAGGCATATGATA+AGG | - | chr5.1:3745457-3745476 | MS.gene015586:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.1:3744647-3744666 | None:intergenic | 35.0% |
| ! | CTTCATTGAGCACTTTGAAA+AGG | + | chr5.1:3742471-3742490 | None:intergenic | 35.0% |
| ! | CTTTGAGTTATATGTCCCTA+TGG | - | chr5.1:3745323-3745342 | MS.gene015586:intron | 35.0% |
| ! | GAAATTTTGCCCTTGAACTT+TGG | + | chr5.1:3745197-3745216 | None:intergenic | 35.0% |
| ! | GACCTCTAAATCTTTTCGAA+TGG | - | chr5.1:3744666-3744685 | MS.gene015586:CDS | 35.0% |
| ! | TGTAGGTAAAGAAAGAGTAC+GGG | + | chr5.1:3744467-3744486 | None:intergenic | 35.0% |
| ! | TTCTTTTTATCAGCAGCAGA+AGG | + | chr5.1:3745672-3745691 | None:intergenic | 35.0% |
| !! | AAAGAATTAGGTCGATTTGC+GGG | - | chr5.1:3745416-3745435 | MS.gene015586:intron | 35.0% |
| !! | ACCTGGTAAAAAGCATCTTA+AGG | + | chr5.1:3744116-3744135 | None:intergenic | 35.0% |
| !! | ACCTTAAGATGCTTTTTACC+AGG | - | chr5.1:3744112-3744131 | MS.gene015586:CDS | 35.0% |
| !! | ATATCTATGGGTACTGAAGT+TGG | - | chr5.1:3744858-3744877 | MS.gene015586:intron | 35.0% |
| !! | CAAAGAATTAGGTCGATTTG+CGG | - | chr5.1:3745415-3745434 | MS.gene015586:intron | 35.0% |
| !! | CTTTTCAAAGTGCTCAATGA+AGG | - | chr5.1:3742469-3742488 | MS.gene015586:CDS | 35.0% |
| !! | GTAAAAAGCATCTTAAGGTC+AGG | + | chr5.1:3744111-3744130 | None:intergenic | 35.0% |
| !! | TGAAGTTGGTGAACTAGATT+TGG | - | chr5.1:3744872-3744891 | MS.gene015586:intron | 35.0% |
| !! | TTAAGGGTAATAAAGCACTG+TGG | + | chr5.1:3743030-3743049 | None:intergenic | 35.0% |
| AAAATGTTAACCTGTTCCCC+CGG | - | chr5.1:3742780-3742799 | MS.gene015586:intron | 40.0% | |
| ACCCCAAGTGATGCATAATT+AGG | - | chr5.1:3743528-3743547 | MS.gene015586:intron | 40.0% | |
| AGAAGCAGCTGTGATATCTA+TGG | - | chr5.1:3744845-3744864 | MS.gene015586:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr5.1:3744718-3744737 | None:intergenic | 40.0% | |
| ATAAATCTTGCAAAGCAGCC+TGG | - | chr5.1:3745056-3745075 | MS.gene015586:intron | 40.0% | |
| ATAGACTATGAGACAAACCC+AGG | + | chr5.1:3743929-3743948 | None:intergenic | 40.0% | |
| CAATTTGACTGCTATGGTTG+GGG | - | chr5.1:3744992-3745011 | MS.gene015586:intron | 40.0% | |
| CCAACCATAGCAGTCAAATT+GGG | + | chr5.1:3744993-3745012 | None:intergenic | 40.0% | |
| CCAAGTGATGCATAATTAGG+TGG | - | chr5.1:3743531-3743550 | MS.gene015586:intron | 40.0% | |
| CCAATTTGACTGCTATGGTT+GGG | - | chr5.1:3744991-3745010 | MS.gene015586:intron | 40.0% | |
| CCACCTAATTATGCATCACT+TGG | + | chr5.1:3743534-3743553 | None:intergenic | 40.0% | |
| GAAGCAGCTGTGATATCTAT+GGG | - | chr5.1:3744846-3744865 | MS.gene015586:intron | 40.0% | |
| GAAGTTGGGGACTATCATTA+AGG | - | chr5.1:3743699-3743718 | MS.gene015586:intron | 40.0% | |
| GATTGATGGAAAAGCTAGCA+AGG | - | chr5.1:3743618-3743637 | MS.gene015586:intron | 40.0% | |
| GATTTATTAAGCTACCCCCA+TGG | + | chr5.1:3745043-3745062 | None:intergenic | 40.0% | |
| TCTAAACTTCTCTGCGAACT+TGG | - | chr5.1:3742534-3742553 | MS.gene015586:CDS | 40.0% | |
| TGTTCACAGCAATGCTGTTA+TGG | - | chr5.1:3743827-3743846 | MS.gene015586:intron | 40.0% | |
| ! | TGTAATCACATGTGTCACTC+TGG | - | chr5.1:3743148-3743167 | MS.gene015586:CDS | 40.0% |
| !! | AGGAAAGCTTTCTGAAGTTC+AGG | - | chr5.1:3742489-3742508 | MS.gene015586:CDS | 40.0% |
| !! | GCAGCTAGTTTGTTGATTGA+TGG | - | chr5.1:3743604-3743623 | MS.gene015586:intron | 40.0% |
| AAATGTTAACCTGTTCCCCC+GGG | - | chr5.1:3742781-3742800 | MS.gene015586:intron | 45.0% | |
| AAGGATAGAAAGAAGGGAGC+TGG | - | chr5.1:3745476-3745495 | MS.gene015586:intron | 45.0% | |
| ACTTGACAGACCTTGCGTAT+TGG | + | chr5.1:3744271-3744290 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.1:3744734-3744753 | None:intergenic | 45.0% | |
| AGATGGTGAAGACAACACCA+TGG | - | chr5.1:3745268-3745287 | MS.gene015586:intron | 45.0% | |
| AGCAGTCAAATTGGGTGCAA+TGG | + | chr5.1:3744985-3745004 | None:intergenic | 45.0% | |
| AGCTGAGAAGGCTCTCTTTA+GGG | - | chr5.1:3745100-3745119 | MS.gene015586:intron | 45.0% | |
| AGCTGTAGCTGATACGAAGT+TGG | - | chr5.1:3743684-3743703 | MS.gene015586:intron | 45.0% | |
| AGGACTGATAACTCCTGCTA+AGG | - | chr5.1:3745499-3745518 | MS.gene015586:intron | 45.0% | |
| ATACCATTCTCGAACCCTCA+TGG | + | chr5.1:3744204-3744223 | None:intergenic | 45.0% | |
| ATGAGGGTTCGAGAATGGTA+TGG | - | chr5.1:3744203-3744222 | MS.gene015586:intron | 45.0% | |
| CAAGCAGCTCCAAAGTTCAA+GGG | - | chr5.1:3745185-3745204 | MS.gene015586:intron | 45.0% | |
| CAGTTGACGGAACTCATAAC+TGG | - | chr5.1:3743873-3743892 | MS.gene015586:intron | 45.0% | |
| CATTATCACAATGAGCACGC+AGG | + | chr5.1:3743657-3743676 | None:intergenic | 45.0% | |
| CCCAACCATAGCAGTCAAAT+TGG | + | chr5.1:3744994-3745013 | None:intergenic | 45.0% | |
| CCCAATTTGACTGCTATGGT+TGG | - | chr5.1:3744990-3745009 | MS.gene015586:intron | 45.0% | |
| CTGTAGCTGATACGAAGTTG+GGG | - | chr5.1:3743686-3743705 | MS.gene015586:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.1:3744724-3744743 | None:intergenic | 45.0% | |
| GATGGTGAAGACAACACCAT+GGG | - | chr5.1:3745269-3745288 | MS.gene015586:intron | 45.0% | |
| GATTTGCGGGTTCTGCTAAA+GGG | - | chr5.1:3745429-3745448 | MS.gene015586:intron | 45.0% | |
| GCTGTAGCTGATACGAAGTT+GGG | - | chr5.1:3743685-3743704 | MS.gene015586:intron | 45.0% | |
| GTTGAAGTTCAGTGCAGACA+AGG | - | chr5.1:3743959-3743978 | MS.gene015586:intron | 45.0% | |
| TAAAGGGAAGCCCAAGATAG+AGG | - | chr5.1:3745445-3745464 | MS.gene015586:intron | 45.0% | |
| TCAAGCAGCTCCAAAGTTCA+AGG | - | chr5.1:3745184-3745203 | MS.gene015586:intron | 45.0% | |
| TGAAGACAACACCATGGGAT+TGG | - | chr5.1:3745274-3745293 | MS.gene015586:intron | 45.0% | |
| TGCAAAGCTTGATTTCTCCG+AGG | - | chr5.1:3744313-3744332 | MS.gene015586:intron | 45.0% | |
| TGCACCCAATTTGACTGCTA+TGG | - | chr5.1:3744986-3745005 | MS.gene015586:intron | 45.0% | |
| TGTCGCACAATGACACATGT+CGG | - | chr5.1:3743177-3743196 | MS.gene015586:CDS | 45.0% | |
| ! | ATGGAAGGAGTTTTCCAGTG+CGG | - | chr5.1:3743347-3743366 | MS.gene015586:CDS | 45.0% |
| !! | CAAAGACAGCATTGGCTATC+AGG | - | chr5.1:3745231-3745250 | MS.gene015586:intron | 45.0% |
| !! | GCAAGGTCTGTCAAGTTGAT+GGG | - | chr5.1:3744275-3744294 | MS.gene015586:intron | 45.0% |
| AATGACACATGTCGGACGCT+GGG | - | chr5.1:3743185-3743204 | MS.gene015586:CDS | 50.0% | |
| AATGTTAACCTGTTCCCCCG+GGG | - | chr5.1:3742782-3742801 | MS.gene015586:intron | 50.0% | |
| ACCAATAGCCTGGACGATCA+TGG | + | chr5.1:3744144-3744163 | None:intergenic | 50.0% | |
| ACCATGATCGTCCAGGCTAT+TGG | - | chr5.1:3744140-3744159 | MS.gene015586:CDS | 50.0% | |
| AGAATCTGCACGGTACTACC+AGG | + | chr5.1:3745077-3745096 | None:intergenic | 50.0% | |
| AGGTGTGATGCACTTGGAGA+TGG | - | chr5.1:3745251-3745270 | MS.gene015586:intron | 50.0% | |
| ATGCCATGAGGGTTCGAGAA+TGG | - | chr5.1:3744198-3744217 | MS.gene015586:intron | 50.0% | |
| CGATTTGCGGGTTCTGCTAA+AGG | - | chr5.1:3745428-3745447 | MS.gene015586:intron | 50.0% | |
| CGTCGAGTAAACCAATAGCC+TGG | + | chr5.1:3744154-3744173 | None:intergenic | 50.0% | |
| CTCAGCTCCAAGAATCTGCA+CGG | + | chr5.1:3745087-3745106 | None:intergenic | 50.0% | |
| GAGCTGAGAAGGCTCTCTTT+AGG | - | chr5.1:3745099-3745118 | MS.gene015586:intron | 50.0% | |
| GATAGAAAGAAGGGAGCTGG+AGG | - | chr5.1:3745479-3745498 | MS.gene015586:intron | 50.0% | |
| GCAGATTCTTGGAGCTGAGA+AGG | - | chr5.1:3745088-3745107 | MS.gene015586:intron | 50.0% | |
| GCTATCAGGTGTGATGCACT+TGG | - | chr5.1:3745245-3745264 | MS.gene015586:intron | 50.0% | |
| GCTGTTATGGAGCTAATGCG+AGG | - | chr5.1:3743840-3743859 | MS.gene015586:intron | 50.0% | |
| GGTAGTACCGTGCAGATTCT+TGG | - | chr5.1:3745077-3745096 | MS.gene015586:intron | 50.0% | |
| TGAGACAAACCCAGGCTCAT+CGG | + | chr5.1:3743921-3743940 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | - | chr5.1:3744578-3744597 | MS.gene015586:intron | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | - | chr5.1:3744577-3744596 | MS.gene015586:intron | 50.0% |
| ! | CACATGTGTCACTCTGGTGT+TGG | - | chr5.1:3743154-3743173 | MS.gene015586:CDS | 50.0% |
| ! | GAAAGAGTACGGGCTTTGTG+TGG | + | chr5.1:3744457-3744476 | None:intergenic | 50.0% |
| ! | GCTTGCTGCAAAGACAGCAT+TGG | - | chr5.1:3745223-3745242 | MS.gene015586:intron | 50.0% |
| ! | GGTACTGTTTGAAACCCCTG+CGG | - | chr5.1:3742438-3742457 | MS.gene015586:CDS | 50.0% |
| ! | GTACTGTTTGAAACCCCTGC+GGG | - | chr5.1:3742439-3742458 | MS.gene015586:CDS | 50.0% |
| !! | CGCAAGGTCTGTCAAGTTGA+TGG | - | chr5.1:3744274-3744293 | MS.gene015586:intron | 50.0% |
| CAATGACACATGTCGGACGC+TGG | - | chr5.1:3743184-3743203 | MS.gene015586:CDS | 55.0% | |
| CAGTGCGGATGCTGCAAGAA+AGG | - | chr5.1:3743362-3743381 | MS.gene015586:CDS | 55.0% | |
| CTTATCCCACCAAGTGGGGT+CGG | - | chr5.1:3744582-3744601 | MS.gene015586:intron | 55.0% | |
| CTTGGTGGGATAAGGCTTGG+TGG | + | chr5.1:3744576-3744595 | None:intergenic | 55.0% | |
| CTTTCTTGCAGCATCCGCAC+TGG | + | chr5.1:3743364-3743383 | None:intergenic | 55.0% | |
| GAGCCATGTCTTGAACAGCG+AGG | + | chr5.1:3743899-3743918 | None:intergenic | 55.0% | |
| GCGCGATTGAGGAATCTCGA+AGG | - | chr5.1:3745392-3745411 | MS.gene015586:intron | 55.0% | |
| GCTATGGTTGGGGAGCTTGT+TGG | - | chr5.1:3745002-3745021 | MS.gene015586:intron | 55.0% | |
| GGCTCTGTTCTCCAATCCCA+TGG | + | chr5.1:3745288-3745307 | None:intergenic | 55.0% | |
| GGGATTGGAGAACAGAGCCA+AGG | - | chr5.1:3745289-3745308 | MS.gene015586:intron | 55.0% | |
| GGGTTCGAGAATGGTATGGC+TGG | - | chr5.1:3744207-3744226 | MS.gene015586:intron | 55.0% | |
| GGTTGACACCATGATCGTCC+AGG | - | chr5.1:3744133-3744152 | MS.gene015586:CDS | 55.0% | |
| TGAAAAGGGCGAAACCCGCA+GGG | + | chr5.1:3742456-3742475 | None:intergenic | 55.0% | |
| TGCAGCTTGAAGCGCGATTG+AGG | - | chr5.1:3745381-3745400 | MS.gene015586:intron | 55.0% | |
| TGCTTCCTTAACCAGTGCCC+CGG | + | chr5.1:3742802-3742821 | None:intergenic | 55.0% | |
| TGGCCTCGCTGTTCAAGACA+TGG | - | chr5.1:3743893-3743912 | MS.gene015586:intron | 55.0% | |
| TTGAAAAGGGCGAAACCCGC+AGG | + | chr5.1:3742457-3742476 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | - | chr5.1:3744576-3744595 | MS.gene015586:intron | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | + | chr5.1:3744579-3744598 | None:intergenic | 55.0% |
| ! | GGACGATCATGGTGTCAACC+TGG | + | chr5.1:3744133-3744152 | None:intergenic | 55.0% |
| ACCAAGTGGGGTCGGCTACA+TGG | - | chr5.1:3744590-3744609 | MS.gene015586:CDS | 60.0% | |
| AGACATGGCTCCGATGAGCC+TGG | - | chr5.1:3743908-3743927 | MS.gene015586:intron | 60.0% | |
| AGCTACCCCCATGGGCAATG+AGG | + | chr5.1:3745034-3745053 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | + | chr5.1:3744591-3744610 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | + | chr5.1:3742800-3742819 | None:intergenic | 60.0% | |
| GAAAAGGGCGAAACCCGCAG+GGG | + | chr5.1:3742455-3742474 | None:intergenic | 60.0% | |
| GACATGGCTCCGATGAGCCT+GGG | - | chr5.1:3743909-3743928 | MS.gene015586:intron | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | + | chr5.1:3742801-3742820 | None:intergenic | 60.0% | |
| GTGCTCGCCTCATTGCCCAT+GGG | - | chr5.1:3745024-3745043 | MS.gene015586:intron | 60.0% | |
| GTTGTGTTAACCGGTGCCCC+CGG | + | chr5.1:3742939-3742958 | None:intergenic | 60.0% | |
| TCCATGTAGCCGACCCCACT+TGG | + | chr5.1:3744594-3744613 | None:intergenic | 60.0% | |
| TGCTCGCCTCATTGCCCATG+GGG | - | chr5.1:3745025-3745044 | MS.gene015586:intron | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | + | chr5.1:3744590-3744609 | None:intergenic | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr5.1:3742799-3742818 | None:intergenic | 60.0% | |
| TTGTGTTAACCGGTGCCCCC+GGG | + | chr5.1:3742938-3742957 | None:intergenic | 60.0% | |
| ! | CGACCCCACTTGGTGGGATA+AGG | + | chr5.1:3744584-3744603 | None:intergenic | 60.0% |
| GCTCGCCTCATTGCCCATGG+GGG | - | chr5.1:3745026-3745045 | MS.gene015586:intron | 65.0% | |
| GGTGCTCGCCTCATTGCCCA+TGG | - | chr5.1:3745023-3745042 | MS.gene015586:intron | 65.0% | |
| TGTGTTAACCGGTGCCCCCG+GGG | + | chr5.1:3742937-3742956 | None:intergenic | 65.0% | |
| TTATCCAGTGCCCCGTGCCC+CGG | - | chr5.1:3742917-3742936 | MS.gene015586:intron | 65.0% | |
| !! | TTCCCCCGGGGCACTGGTTA+AGG | - | chr5.1:3742794-3742813 | MS.gene015586:intron | 65.0% |
| AACCAGTGCCCCGGGGGAAC+AGG | + | chr5.1:3742793-3742812 | None:intergenic | 70.0% | |
| AACCTGTTCCCCCGGGGCAC+TGG | - | chr5.1:3742788-3742807 | MS.gene015586:intron | 70.0% | |
| TATCCAGTGCCCCGTGCCCC+GGG | - | chr5.1:3742918-3742937 | MS.gene015586:intron | 70.0% | |
| !! | GGGGCACGGGGCACTGGATA+AGG | + | chr5.1:3742918-3742937 | None:intergenic | 70.0% |
| ATCCAGTGCCCCGTGCCCCG+GGG | - | chr5.1:3742919-3742938 | MS.gene015586:intron | 75.0% | |
| TAACCGGTGCCCCCGGGGCA+CGG | + | chr5.1:3742932-3742951 | None:intergenic | 75.0% | |
| ! | AACCGGTGCCCCCGGGGCAC+GGG | + | chr5.1:3742931-3742950 | None:intergenic | 80.0% |
| ! | TCCAGTGCCCCGTGCCCCGG+GGG | - | chr5.1:3742920-3742939 | MS.gene015586:intron | 80.0% |
| ! | ACCGGTGCCCCCGGGGCACG+GGG | + | chr5.1:3742930-3742949 | None:intergenic | 85.0% |
| ! | GCCCCCGGGGCACGGGGCAC+TGG | + | chr5.1:3742924-3742943 | None:intergenic | 90.0% |
| !! | GCCCCGTGCCCCGGGGGCAC+CGG | - | chr5.1:3742926-3742945 | MS.gene015586:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 3742433 | 3745882 | 3742433 | ID=MS.gene015586 |
| chr5.1 | mRNA | 3742433 | 3745882 | 3742433 | ID=MS.gene015586.t1;Parent=MS.gene015586 |
| chr5.1 | exon | 3745805 | 3745882 | 3745805 | ID=MS.gene015586.t1.exon1;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3745805 | 3745882 | 3745805 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3744932 | 3744973 | 3744932 | ID=MS.gene015586.t1.exon2;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3744932 | 3744973 | 3744932 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3744586 | 3744765 | 3744586 | ID=MS.gene015586.t1.exon3;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3744586 | 3744765 | 3744586 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3744335 | 3744499 | 3744335 | ID=MS.gene015586.t1.exon4;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3744335 | 3744499 | 3744335 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3743981 | 3744181 | 3743981 | ID=MS.gene015586.t1.exon5;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3743981 | 3744181 | 3743981 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3743005 | 3743502 | 3743005 | ID=MS.gene015586.t1.exon6;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3743005 | 3743502 | 3743005 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3742795 | 3742929 | 3742795 | ID=MS.gene015586.t1.exon7;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3742795 | 3742929 | 3742795 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| chr5.1 | exon | 3742433 | 3742718 | 3742433 | ID=MS.gene015586.t1.exon8;Parent=MS.gene015586.t1 |
| chr5.1 | CDS | 3742433 | 3742718 | 3742433 | ID=cds.MS.gene015586.t1;Parent=MS.gene015586.t1 |
| Gene Sequence |
| Protein sequence |
