Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019309.t1 | XP_003611088.1 | 99.1 | 444 | 4 | 0 | 1 | 444 | 1 | 444 | 7.20E-244 | 853.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019309.t1 | O04658 | 81.5 | 444 | 82 | 0 | 1 | 444 | 1 | 444 | 1.6e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019309.t1 | G7KC30 | 99.1 | 444 | 4 | 0 | 1 | 444 | 1 | 444 | 5.2e-244 | 853.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019309.t1 | MTR_5g010260 | 97.487 | 597 | 8 | 2 | 1 | 597 | 1 | 590 | 0.0 | 1165 |
| MS.gene019309.t1 | MTR_4g070910 | 90.693 | 462 | 43 | 0 | 1 | 462 | 1 | 462 | 0.0 | 853 |
| MS.gene019309.t1 | MTR_4g103790 | 43.137 | 408 | 215 | 5 | 1 | 393 | 3 | 408 | 1.82e-101 | 318 |
| MS.gene019309.t1 | MTR_5g010290 | 77.536 | 138 | 29 | 1 | 26 | 161 | 9 | 146 | 1.43e-66 | 214 |
| MS.gene019309.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 34 | 256 | 1.29e-29 | 122 |
| MS.gene019309.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 95 | 317 | 1.62e-29 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019309.t1 | AT5G27120 | 81.532 | 444 | 82 | 0 | 1 | 444 | 1 | 444 | 0.0 | 766 |
| MS.gene019309.t1 | AT3G05060 | 80.313 | 447 | 88 | 0 | 1 | 447 | 2 | 448 | 0.0 | 761 |
| MS.gene019309.t1 | AT5G27140 | 63.146 | 426 | 121 | 3 | 1 | 425 | 1 | 391 | 0.0 | 521 |
| MS.gene019309.t1 | AT5G27140 | 57.959 | 490 | 142 | 6 | 1 | 485 | 1 | 431 | 0.0 | 518 |
| MS.gene019309.t1 | AT1G56110 | 44.390 | 410 | 207 | 6 | 1 | 393 | 3 | 408 | 5.02e-111 | 342 |
| MS.gene019309.t1 | AT3G12860 | 43.171 | 410 | 212 | 6 | 1 | 393 | 3 | 408 | 9.71e-107 | 330 |
| MS.gene019309.t1 | AT1G60170 | 28.972 | 214 | 152 | 0 | 159 | 372 | 95 | 308 | 5.53e-22 | 100 |
Find 122 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATATATAAGACCATATT+TGG | 0.164834 | 5.4:+4604482 | None:intergenic |
| ACTTCTTTACACAGGATTTA+TGG | 0.208613 | 5.4:-4606301 | MS.gene019309:intron |
| AAAGAAGGAAAAGAAGAAAA+AGG | 0.214928 | 5.4:-4603936 | MS.gene019309:CDS |
| AAAGAAAGAAAAGAAGAAAA+AGG | 0.230780 | 5.4:-4603816 | MS.gene019309:CDS |
| CCCAACCATAGCAGTCAAAT+TGG | 0.271023 | 5.4:+4604638 | None:intergenic |
| CTGATATATTCTCAAACTTC+TGG | 0.278126 | 5.4:+4606059 | None:intergenic |
| CAAAGACAGCATTGGCTATC+AGG | 0.281768 | 5.4:-4604398 | MS.gene019309:CDS |
| TGAAATTGGTGAACTAGATT+TGG | 0.330351 | 5.4:-4604757 | MS.gene019309:CDS |
| GAGCTGAGAAGGCTCTCTTT+AGG | 0.330425 | 5.4:-4604530 | MS.gene019309:CDS |
| AGAAGCAGCTGTGATATCTA+TGG | 0.331075 | 5.4:-4604784 | MS.gene019309:CDS |
| AGCTGAGAAGGCTCTCTTTA+GGG | 0.345329 | 5.4:-4604529 | MS.gene019309:CDS |
| GGCATATCAGCAGCATCTTC+AGG | 0.352795 | 5.4:+4603605 | None:intergenic |
| GGTAGTACCGTGCAGATTCT+TGG | 0.357226 | 5.4:-4604552 | MS.gene019309:CDS |
| TTATCATATGCCTCTATCTT+GGG | 0.358705 | 5.4:+4604176 | None:intergenic |
| AGGAAAGCTTTCTGAAGTTC+AGG | 0.363092 | 5.4:-4607134 | MS.gene019309:intron |
| ATATCTATGGGTACTGAAAT+TGG | 0.363730 | 5.4:-4604771 | MS.gene019309:CDS |
| ACCATGATCGTCCAGGCTAT+TGG | 0.367547 | 5.4:-4605489 | MS.gene019309:CDS |
| GCAGCTAGTTTGTTGATTGA+TGG | 0.370776 | 5.4:-4606025 | MS.gene019309:CDS |
| CTTATCATATGCCTCTATCT+TGG | 0.380405 | 5.4:+4604175 | None:intergenic |
| CAACTTCATGTTCTGGCTCC+TGG | 0.380541 | 5.4:+4603744 | None:intergenic |
| CAGTTGACGGAACTCATAAC+TGG | 0.386655 | 5.4:-4605756 | MS.gene019309:CDS |
| AATCTCGAAGGCAAAGAATT+AGG | 0.387421 | 5.4:-4604227 | MS.gene019309:CDS |
| AGAACTTACTAAAATCATTC+AGG | 0.388638 | 5.4:-4605391 | MS.gene019309:CDS |
| AAACATGCTACTCCCAAATA+TGG | 0.397940 | 5.4:-4604495 | MS.gene019309:CDS |
| ATATATCATGCATCATTGAT+TGG | 0.403489 | 5.4:-4604468 | MS.gene019309:CDS |
| CGCAAGGTCTGTCAAGTTGA+TGG | 0.404405 | 5.4:-4605355 | MS.gene019309:CDS |
| CTTCATTGAGCACTTTGAAA+AGG | 0.407262 | 5.4:+4607155 | None:intergenic |
| CGATTTGCGGGTTCTGCTAA+AGG | 0.412920 | 5.4:-4604203 | MS.gene019309:CDS |
| CCAATTTGACTGCTATGGTT+GGG | 0.414603 | 5.4:-4604638 | MS.gene019309:CDS |
| GCTATGGTTGGGGAGCTTGT+TGG | 0.416805 | 5.4:-4604627 | MS.gene019309:CDS |
| AAAGAATTAGGTCGATTTGC+GGG | 0.418834 | 5.4:-4604215 | MS.gene019309:CDS |
| TGTTCACAGCAATGCTGTTA+TGG | 0.427112 | 5.4:-4605802 | MS.gene019309:CDS |
| ACTTGACAGACCTTGCGTAT+TGG | 0.437943 | 5.4:+4605361 | None:intergenic |
| AAGGATAGAAAGAAGGGAGC+TGG | 0.441375 | 5.4:-4604155 | MS.gene019309:CDS |
| AGACATGGCTCCGATGAGCC+TGG | 0.442031 | 5.4:-4605721 | MS.gene019309:CDS |
| GCTGTAGCTGATACGAAGTT+GGG | 0.449844 | 5.4:-4605944 | MS.gene019309:CDS |
| AACAAAAGATATACCTTAGC+AGG | 0.456722 | 5.4:+4604119 | None:intergenic |
| TTCATTGAGCACTTTGAAAA+GGG | 0.457174 | 5.4:+4607156 | None:intergenic |
| GAAGTTGGGGACTATCATTA+AGG | 0.458948 | 5.4:-4605930 | MS.gene019309:CDS |
| AGTTCAAGGGCAAAATTTCT+CGG | 0.467618 | 5.4:-4604431 | MS.gene019309:CDS |
| CAGTGCGGATGCTGCAAGAA+AGG | 0.471034 | 5.4:-4606267 | MS.gene019309:intron |
| AGAAAAGAAGAAGAAAAGGA+AGG | 0.475695 | 5.4:-4603714 | MS.gene019309:CDS |
| GGCTCTGTTCTCCAATCCCA+TGG | 0.476474 | 5.4:+4604344 | None:intergenic |
| CTTTCTTGCAGCATCCGCAC+TGG | 0.482863 | 5.4:+4606268 | None:intergenic |
| AGCTGTAGCTGATACGAAGT+TGG | 0.485755 | 5.4:-4605945 | MS.gene019309:CDS |
| TTGAAAAGGGCGAAACCCGC+AGG | 0.486202 | 5.4:+4607169 | None:intergenic |
| CAAGATAGAGGCATATGATA+AGG | 0.489790 | 5.4:-4604174 | MS.gene019309:CDS |
| GTGCTCGCCTCATTGCCCAT+GGG | 0.492711 | 5.4:-4604605 | MS.gene019309:CDS |
| ATATGATAAGGATAGAAAGA+AGG | 0.493507 | 5.4:-4604162 | MS.gene019309:CDS |
| CCAACCATAGCAGTCAAATT+GGG | 0.494028 | 5.4:+4604639 | None:intergenic |
| CAATTTGACTGCTATGGTTG+GGG | 0.494927 | 5.4:-4604637 | MS.gene019309:CDS |
| GATTTGCGGGTTCTGCTAAA+GGG | 0.495464 | 5.4:-4604202 | MS.gene019309:CDS |
| TGATATATAAGACCATATTT+GGG | 0.499043 | 5.4:+4604483 | None:intergenic |
| TGAAGACAACACCATGGGAT+TGG | 0.499977 | 5.4:-4604355 | MS.gene019309:CDS |
| CCCAATTTGACTGCTATGGT+TGG | 0.502179 | 5.4:-4604639 | MS.gene019309:CDS |
| TGCACCCAATTTGACTGCTA+TGG | 0.506074 | 5.4:-4604643 | MS.gene019309:CDS |
| GGTGCTCGCCTCATTGCCCA+TGG | 0.506735 | 5.4:-4604606 | MS.gene019309:CDS |
| TCTATGATTATCTAAAGAGC+AGG | 0.507685 | 5.4:-4604677 | MS.gene019309:CDS |
| AATTAGGTGGTCAAATTGAA+AGG | 0.512138 | 5.4:-4606085 | MS.gene019309:intron |
| CAAAGAATTAGGTCGATTTG+CGG | 0.513905 | 5.4:-4604216 | MS.gene019309:CDS |
| ACCAATAGCCTGGACGATCA+TGG | 0.522254 | 5.4:+4605488 | None:intergenic |
| GCAGATTCTTGGAGCTGAGA+AGG | 0.524438 | 5.4:-4604541 | MS.gene019309:CDS |
| AGCAGTCAAATTGGGTGCAA+TGG | 0.533807 | 5.4:+4604647 | None:intergenic |
| AGAGACACAGATTTGAATGC+AGG | 0.535080 | 5.4:-4603662 | MS.gene019309:CDS |
| TAAAGGGAAGCCCAAGATAG+AGG | 0.536666 | 5.4:-4604186 | MS.gene019309:CDS |
| GACATGGCTCCGATGAGCCT+GGG | 0.541122 | 5.4:-4605720 | MS.gene019309:CDS |
| ATAAATCTTGCAAAGCAGCC+TGG | 0.545223 | 5.4:-4604573 | MS.gene019309:CDS |
| GGGTTCGAGAATGGTATGGC+TGG | 0.545668 | 5.4:-4605422 | MS.gene019309:CDS |
| ATGCCATGAGGGTTCGAGAA+TGG | 0.547091 | 5.4:-4605431 | MS.gene019309:CDS |
| TCAAGCAGCTCCAAAGTTCA+AGG | 0.549296 | 5.4:-4604445 | MS.gene019309:CDS |
| ATTCCGAAAGAGATAAAACT+TGG | 0.550920 | 5.4:+4604712 | None:intergenic |
| AGGTATTCGATTTCAGTTGA+CGG | 0.556860 | 5.4:-4605769 | MS.gene019309:CDS |
| CGTCGAGTAAACCAATAGCC+TGG | 0.559795 | 5.4:+4605478 | None:intergenic |
| TATGATAAGGATAGAAAGAA+GGG | 0.562992 | 5.4:-4604161 | MS.gene019309:CDS |
| AGAATCTGCACGGTACTACC+AGG | 0.563552 | 5.4:+4604555 | None:intergenic |
| GAAGCAGCTGTGATATCTAT+GGG | 0.568328 | 5.4:-4604783 | MS.gene019309:CDS |
| GCTATCAGGTGTGATGCACT+TGG | 0.570354 | 5.4:-4604384 | MS.gene019309:CDS |
| TGCAGCTTGAAGCGCGATTG+AGG | 0.572330 | 5.4:-4604250 | MS.gene019309:intron |
| GCAAGGTCTGTCAAGTTGAT+GGG | 0.574951 | 5.4:-4605354 | MS.gene019309:CDS |
| CTTTACACAGGATTTATGGA+AGG | 0.579685 | 5.4:-4606297 | MS.gene019309:intron |
| TGAAAAGGGCGAAACCCGCA+GGG | 0.581689 | 5.4:+4607170 | None:intergenic |
| GCTTGCTGCAAAGACAGCAT+TGG | 0.582410 | 5.4:-4604406 | MS.gene019309:CDS |
| TGCTCGCCTCATTGCCCATG+GGG | 0.582657 | 5.4:-4604604 | MS.gene019309:CDS |
| TGAGACAAACCCAGGCTCAT+CGG | 0.584661 | 5.4:+4605711 | None:intergenic |
| ACTTTGCAAGCTGATGTAGA+TGG | 0.587306 | 5.4:-4603770 | MS.gene019309:CDS |
| ATACCATTCTCGAACCCTCA+TGG | 0.587900 | 5.4:+4605428 | None:intergenic |
| GATTGATGGAAAAGCTAGCA+AGG | 0.589549 | 5.4:-4606011 | MS.gene019309:CDS |
| ATGTTCCATTCCGCTCTAGT+CGG | 0.590834 | 5.4:+4603547 | None:intergenic |
| GATAGAAAGAAGGGAGCTGG+AGG | 0.601173 | 5.4:-4604152 | MS.gene019309:CDS |
| AGCTGATGTAGATGGTGACC+AGG | 0.610256 | 5.4:-4603762 | MS.gene019309:CDS |
| TCCACCTCAGTATTCTCAGT+AGG | 0.610509 | 5.4:+4603689 | None:intergenic |
| GGTTGACACCATGATCGTCC+AGG | 0.612729 | 5.4:-4605496 | MS.gene019309:CDS |
| AGGTGTGATGCACTTGGAGA+TGG | 0.614670 | 5.4:-4604378 | MS.gene019309:CDS |
| ATGTATTCAACTCTTTATCG+AGG | 0.616968 | 5.4:+4605454 | None:intergenic |
| GTTGAATACATATGCCATGA+GGG | 0.622022 | 5.4:-4605442 | MS.gene019309:CDS |
| CTCAGCTCCAAGAATCTGCA+CGG | 0.622477 | 5.4:+4604545 | None:intergenic |
| CAAGCAGCTCCAAAGTTCAA+GGG | 0.624371 | 5.4:-4604444 | MS.gene019309:CDS |
| ATGAGGGTTCGAGAATGGTA+TGG | 0.625343 | 5.4:-4605426 | MS.gene019309:CDS |
| GTACTGTTTGAAACCCCTGC+GGG | 0.629229 | 5.4:-4607184 | MS.gene019309:CDS |
| GAATATATCAGAAGCTACAG+AGG | 0.630088 | 5.4:-4606047 | MS.gene019309:CDS |
| AGGACTGATAACTCCTGCTA+AGG | 0.630812 | 5.4:-4604132 | MS.gene019309:intron |
| AGCAGCATCTTCAGGCTCTG+AGG | 0.630929 | 5.4:+4603613 | None:intergenic |
| TGGCCTCGCTGTTCAAGACA+TGG | 0.636384 | 5.4:-4605736 | MS.gene019309:CDS |
| GTTGAAGTTCAGTGCAGACA+AGG | 0.637677 | 5.4:-4605670 | MS.gene019309:intron |
| ACCTACTGAGAATACTGAGG+TGG | 0.641535 | 5.4:-4603690 | MS.gene019309:CDS |
| CTGTAGCTGATACGAAGTTG+GGG | 0.642131 | 5.4:-4605943 | MS.gene019309:CDS |
| ATAGACTATGAGACAAACCC+AGG | 0.642701 | 5.4:+4605703 | None:intergenic |
| AGGATAATATCCAATACGCA+AGG | 0.653312 | 5.4:-4605371 | MS.gene019309:CDS |
| GATGGTGAAGACAACACCAT+GGG | 0.656945 | 5.4:-4604360 | MS.gene019309:CDS |
| ATTGATGGAAAAGCTAGCAA+GGG | 0.667037 | 5.4:-4606010 | MS.gene019309:CDS |
| AGTTGAATACATATGCCATG+AGG | 0.670426 | 5.4:-4605443 | MS.gene019309:CDS |
| GGGATTGGAGAACAGAGCCA+AGG | 0.677522 | 5.4:-4604340 | MS.gene019309:intron |
| GCTCGCCTCATTGCCCATGG+GGG | 0.687875 | 5.4:-4604603 | MS.gene019309:CDS |
| GCGCGATTGAGGAATCTCGA+AGG | 0.689896 | 5.4:-4604239 | MS.gene019309:CDS |
| CATTATCACAATGAGCACGC+AGG | 0.694162 | 5.4:+4605975 | None:intergenic |
| AGTACTGTTTGAAACCCCTG+CGG | 0.695414 | 5.4:-4607185 | MS.gene019309:CDS |
| GAAAAGGGCGAAACCCGCAG+GGG | 0.700713 | 5.4:+4607171 | None:intergenic |
| TGCAAAGCTTGATTTCTCCG+AGG | 0.702184 | 5.4:-4605316 | MS.gene019309:intron |
| GCTGTTATGGAGCTAATGCG+AGG | 0.708635 | 5.4:-4605789 | MS.gene019309:CDS |
| AGATGGTGAAGACAACACCA+TGG | 0.721514 | 5.4:-4604361 | MS.gene019309:CDS |
| GGAACCTACTGAGAATACTG+AGG | 0.738690 | 5.4:-4603693 | MS.gene019309:CDS |
| GAGCCATGTCTTGAACAGCG+AGG | 0.799226 | 5.4:+4605733 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAACTAAAAAAAAAAAA+AGG | + | chr5.4:4604083-4604102 | None:intergenic | 10.0% |
| !! | TAAATATTATTTGTTTAAAG+AGG | + | chr5.4:4605646-4605665 | None:intergenic | 10.0% |
| !! | TACAACTAAAAAAAAAAAAA+GGG | + | chr5.4:4604082-4604101 | None:intergenic | 10.0% |
| !! | ACTGAGTAATTAAAATTTAA+GGG | + | chr5.4:4604169-4604188 | None:intergenic | 15.0% |
| !! | TACTGAGTAATTAAAATTTA+AGG | + | chr5.4:4604170-4604189 | None:intergenic | 15.0% |
| !!! | TTAACATTTTCCAAAAAAAA+AGG | + | chr5.4:4603892-4603911 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCGATAATTGAAT+CGG | + | chr5.4:4606737-4606756 | None:intergenic | 15.0% |
| !! | AAAAAGAAAAGAAGAAGAAA+AGG | - | chr5.4:4607034-4607053 | MS.gene019309:intron | 20.0% |
| !! | AAAGAAAGAAAAGAAGAAAA+AGG | - | chr5.4:4606936-4606955 | MS.gene019309:intron | 20.0% |
| !! | ATGATATATAAGACCATATT+TGG | + | chr5.4:4606273-4606292 | None:intergenic | 20.0% |
| !! | ATGTAAAAGAGTAAAACAAT+TGG | + | chr5.4:4605490-4605509 | None:intergenic | 20.0% |
| !! | CAATTGAAGGATTTATAAAT+GGG | + | chr5.4:4604529-4604548 | None:intergenic | 20.0% |
| !! | TATGAATTATAGTGATGTAT+GGG | - | chr5.4:4604113-4604132 | MS.gene019309:intron | 20.0% |
| !! | TGATAAAAAGAAAGAAAAGA+AGG | - | chr5.4:4606912-4606931 | MS.gene019309:intron | 20.0% |
| !! | TGATATATAAGACCATATTT+GGG | + | chr5.4:4606272-4606291 | None:intergenic | 20.0% |
| !! | TTAGAAGATGATAATAACAA+TGG | + | chr5.4:4603648-4603667 | None:intergenic | 20.0% |
| !! | TTCAAATTTCAAATGATCAT+CGG | + | chr5.4:4604251-4604270 | None:intergenic | 20.0% |
| !!! | CAAAATCTGTAATATGTTTT+AGG | + | chr5.4:4605922-4605941 | None:intergenic | 20.0% |
| !!! | TGTAATATGTTTTAGGATAA+AGG | + | chr5.4:4605915-4605934 | None:intergenic | 20.0% |
| !!! | TTGTATCTTGTATGTTTTTA+AGG | - | chr5.4:4603823-4603842 | MS.gene019309:CDS | 20.0% |
| !!! | TTTGATTTACTCTTAAATCT+TGG | - | chr5.4:4605533-4605552 | MS.gene019309:intron | 20.0% |
| ! | AAAAAAATCTGATTCTGCAA+TGG | - | chr5.4:4606750-4606769 | MS.gene019309:intron | 25.0% |
| ! | AAACATCAAAAGTTTCTTAG+GGG | + | chr5.4:4604872-4604891 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAAAGGAGAAAA+AGG | - | chr5.4:4606825-4606844 | MS.gene019309:intron | 25.0% |
| ! | AAAGAAGGAAAAGAAGAAAA+AGG | - | chr5.4:4606816-4606835 | MS.gene019309:intron | 25.0% |
| ! | AAATCGATAAACATTTGCTT+CGG | + | chr5.4:4605159-4605178 | None:intergenic | 25.0% |
| ! | ACAAAAATCTAATACTGCAA+TGG | - | chr5.4:4606861-4606880 | MS.gene019309:intron | 25.0% |
| ! | ACTATAATTCATAGATCATG+AGG | + | chr5.4:4604106-4604125 | None:intergenic | 25.0% |
| ! | AGAACTTACTAAAATCATTC+AGG | - | chr5.4:4605361-4605380 | MS.gene019309:CDS | 25.0% |
| ! | ATATATCATGCATCATTGAT+TGG | - | chr5.4:4606284-4606303 | MS.gene019309:CDS | 25.0% |
| ! | ATATGATAAGGATAGAAAGA+AGG | - | chr5.4:4606590-4606609 | MS.gene019309:intron | 25.0% |
| ! | ATGAATTATAGTGATGTATG+GGG | - | chr5.4:4604114-4604133 | MS.gene019309:intron | 25.0% |
| ! | CAAACATCAAAAGTTTCTTA+GGG | + | chr5.4:4604873-4604892 | None:intergenic | 25.0% |
| ! | CAAGCAAAAAGAAAGAAAAA+AGG | - | chr5.4:4607169-4607188 | MS.gene019309:CDS | 25.0% |
| ! | CTATGAATTATAGTGATGTA+TGG | - | chr5.4:4604112-4604131 | MS.gene019309:intron | 25.0% |
| ! | GCAATTGAAGGATTTATAAA+TGG | + | chr5.4:4604530-4604549 | None:intergenic | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr5.4:4605754-4605773 | MS.gene019309:CDS | 25.0% |
| ! | TACCTACATGATTGAAAATA+CGG | - | chr5.4:4605602-4605621 | MS.gene019309:intron | 25.0% |
| ! | TATGATAAGGATAGAAAGAA+GGG | - | chr5.4:4606591-4606610 | MS.gene019309:intron | 25.0% |
| ! | TCAAACATCAAAAGTTTCTT+AGG | + | chr5.4:4604874-4604893 | None:intergenic | 25.0% |
| ! | TGATAAAAAGAAAGCAAAGA+AGG | - | chr5.4:4606801-4606820 | MS.gene019309:intron | 25.0% |
| ! | TGTGATGAAAAAAGATCAAA+TGG | + | chr5.4:4605869-4605888 | None:intergenic | 25.0% |
| !! | AGGTATATCTTTTGTTCATT+TGG | - | chr5.4:4606640-4606659 | MS.gene019309:intron | 25.0% |
| !! | TTCCAAAAAAAAAGGTGTAA+TGG | + | chr5.4:4603884-4603903 | None:intergenic | 25.0% |
| !! | TTGCATTTTCAGCTTATTTA+AGG | - | chr5.4:4603761-4603780 | MS.gene019309:CDS | 25.0% |
| !!! | AACCATTACACCTTTTTTTT+TGG | - | chr5.4:4603879-4603898 | MS.gene019309:CDS | 25.0% |
| !!! | CTTTTTTCTTTCTTTTTGCT+TGG | + | chr5.4:4607171-4607190 | None:intergenic | 25.0% |
| !!! | TGAATGATTTTAGTAAGTTC+TGG | + | chr5.4:4605362-4605381 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTTTCAATTGCAA+TGG | - | chr5.4:4603693-4603712 | MS.gene019309:CDS | 25.0% |
| !!! | TTTGTTCATTTGGTATTGAT+TGG | - | chr5.4:4606650-4606669 | MS.gene019309:intron | 25.0% |
| !!! | TTTTTTTTTCTTCTGATGTC+TGG | - | chr5.4:4605177-4605196 | MS.gene019309:intron | 25.0% |
| AAAAAAAGGGTTGTGTTAAC+CGG | + | chr5.4:4604069-4604088 | None:intergenic | 30.0% | |
| AACAAAAGATATACCTTAGC+AGG | + | chr5.4:4606636-4606655 | None:intergenic | 30.0% | |
| AACATCAAAAGTTTCTTAGG+GGG | + | chr5.4:4604871-4604890 | None:intergenic | 30.0% | |
| AACCATTCGAAAAGATTTAG+AGG | + | chr5.4:4605794-4605813 | None:intergenic | 30.0% | |
| AAGTTTGGTATAACAACCAT+AGG | + | chr5.4:4606465-4606484 | None:intergenic | 30.0% | |
| AATTAGGTGGTCAAATTGAA+AGG | - | chr5.4:4604667-4604686 | MS.gene019309:CDS | 30.0% | |
| ACTTCTTTACACAGGATTTA+TGG | - | chr5.4:4604451-4604470 | MS.gene019309:CDS | 30.0% | |
| AGAAAAGAAGAAGAAAAGGA+AGG | - | chr5.4:4607038-4607057 | MS.gene019309:intron | 30.0% | |
| AGTTTGGTATAACAACCATA+GGG | + | chr5.4:4606464-4606483 | None:intergenic | 30.0% | |
| ATGATTTCTGATTCATGACT+TGG | - | chr5.4:4603738-4603757 | MS.gene019309:CDS | 30.0% | |
| ATGTAGGTAAAGAAAGAGTA+CGG | + | chr5.4:4605591-4605610 | None:intergenic | 30.0% | |
| ATGTATTCAACTCTTTATCG+AGG | + | chr5.4:4605301-4605320 | None:intergenic | 30.0% | |
| ATGTTGGCAATATTATGATG+GGG | - | chr5.4:4604560-4604579 | MS.gene019309:CDS | 30.0% | |
| ATTCCGAAAGAGATAAAACT+TGG | + | chr5.4:4606043-4606062 | None:intergenic | 30.0% | |
| ATTTGCAAACTTCTTTACAC+AGG | - | chr5.4:4604443-4604462 | MS.gene019309:CDS | 30.0% | |
| CAAAATGTGTAAGTGAAGTT+TGG | + | chr5.4:4606480-4606499 | None:intergenic | 30.0% | |
| CTGATATATTCTCAAACTTC+TGG | + | chr5.4:4604696-4604715 | None:intergenic | 30.0% | |
| GACTATCATTAAGGAAAAAC+TGG | - | chr5.4:4604831-4604850 | MS.gene019309:intron | 30.0% | |
| GATGAAAAAAGATCAAATGG+AGG | + | chr5.4:4605866-4605885 | None:intergenic | 30.0% | |
| GATGTTGGCAATATTATGAT+GGG | - | chr5.4:4604559-4604578 | MS.gene019309:CDS | 30.0% | |
| TCTATGATTATCTAAAGAGC+AGG | - | chr5.4:4606075-4606094 | MS.gene019309:CDS | 30.0% | |
| TGAAATTGGTGAACTAGATT+TGG | - | chr5.4:4605995-4606014 | MS.gene019309:CDS | 30.0% | |
| TGATGTTGGCAATATTATGA+TGG | - | chr5.4:4604558-4604577 | MS.gene019309:CDS | 30.0% | |
| TTATCATATGCCTCTATCTT+GGG | + | chr5.4:4606579-4606598 | None:intergenic | 30.0% | |
| TTTGTTTAAAGAGGAATCAC+AGG | + | chr5.4:4605637-4605656 | None:intergenic | 30.0% | |
| ! | AACCGTATTTTCAATCATGT+AGG | + | chr5.4:4605607-4605626 | None:intergenic | 30.0% |
| ! | CTGGTTAAGGTATCTAAAAA+AGG | + | chr5.4:4604026-4604045 | None:intergenic | 30.0% |
| ! | GACAAATTGTATTTCTACCT+CGG | + | chr5.4:4605456-4605475 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.4:4605811-4605830 | MS.gene019309:CDS | 30.0% |
| ! | TCTAGTTTGTAATCTATCAG+AGG | - | chr5.4:4604195-4604214 | MS.gene019309:CDS | 30.0% |
| ! | TGGTTTTTGATAGAACACAA+TGG | + | chr5.4:4605750-4605769 | None:intergenic | 30.0% |
| ! | TTCATTGAGCACTTTGAAAA+GGG | + | chr5.4:4603599-4603618 | None:intergenic | 30.0% |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr5.4:4605801-4605820 | MS.gene019309:CDS | 30.0% |
| ! | TTTTTCACAACTTCATGTTC+TGG | + | chr5.4:4607018-4607037 | None:intergenic | 30.0% |
| !! | ATATCTATGGGTACTGAAAT+TGG | - | chr5.4:4605981-4606000 | MS.gene019309:CDS | 30.0% |
| !! | CATATTACAGATTTTGACAG+AGG | - | chr5.4:4605926-4605945 | MS.gene019309:CDS | 30.0% |
| !! | TGACCAAGTTTTATCTCTTT+CGG | - | chr5.4:4606037-4606056 | MS.gene019309:CDS | 30.0% |
| !!! | AGGAACACTGTTTTTTTGTA+AGG | - | chr5.4:4603843-4603862 | MS.gene019309:CDS | 30.0% |
| AAACATGCTACTCCCAAATA+TGG | - | chr5.4:4606257-4606276 | MS.gene019309:intron | 35.0% | |
| AAAGGAGAAAAAGGAAGAAG+AGG | - | chr5.4:4606834-4606853 | MS.gene019309:intron | 35.0% | |
| AATCTCGAAGGCAAAGAATT+AGG | - | chr5.4:4606525-4606544 | MS.gene019309:intron | 35.0% | |
| AATTGCGTGTTTACTGATGT+TGG | - | chr5.4:4604544-4604563 | MS.gene019309:CDS | 35.0% | |
| ACCTAATTATGCATCACTTG+GGG | + | chr5.4:4604655-4604674 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr5.4:4605782-4605801 | None:intergenic | 35.0% | |
| AGGATAATATCCAATACGCA+AGG | - | chr5.4:4605381-4605400 | MS.gene019309:CDS | 35.0% | |
| AGGTATTCGATTTCAGTTGA+CGG | - | chr5.4:4604983-4605002 | MS.gene019309:intron | 35.0% | |
| AGTTCAAGGGCAAAATTTCT+CGG | - | chr5.4:4606321-4606340 | MS.gene019309:intron | 35.0% | |
| AGTTGAATACATATGCCATG+AGG | - | chr5.4:4605309-4605328 | MS.gene019309:intron | 35.0% | |
| ATCAGATCATGAAAGAACGT+AGG | + | chr5.4:4604409-4604428 | None:intergenic | 35.0% | |
| ATCAGTAAACACGCAATTGA+AGG | + | chr5.4:4604542-4604561 | None:intergenic | 35.0% | |
| ATTGATGGAAAAGCTAGCAA+GGG | - | chr5.4:4604742-4604761 | MS.gene019309:CDS | 35.0% | |
| ATTTATTAAGCTACCCCCAT+GGG | + | chr5.4:4606165-4606184 | None:intergenic | 35.0% | |
| CACCTAATTATGCATCACTT+GGG | + | chr5.4:4604656-4604675 | None:intergenic | 35.0% | |
| CAGGAGAAAAGAAGAAAAAG+AGG | - | chr5.4:4607109-4607128 | MS.gene019309:intron | 35.0% | |
| CTTATCATATGCCTCTATCT+TGG | + | chr5.4:4606580-4606599 | None:intergenic | 35.0% | |
| CTTTACACAGGATTTATGGA+AGG | - | chr5.4:4604455-4604474 | MS.gene019309:CDS | 35.0% | |
| GAATATATCAGAAGCTACAG+AGG | - | chr5.4:4604705-4604724 | MS.gene019309:CDS | 35.0% | |
| GAGTAAAACAATTGGCAACA+CGG | + | chr5.4:4605482-4605501 | None:intergenic | 35.0% | |
| GTTCATATTACAGTGAACTG+TGG | - | chr5.4:4604363-4604382 | MS.gene019309:CDS | 35.0% | |
| GTTGAATACATATGCCATGA+GGG | - | chr5.4:4605310-4605329 | MS.gene019309:intron | 35.0% | |
| TCAAAGTACAACAAGTACCT+TGG | + | chr5.4:4606432-4606451 | None:intergenic | 35.0% | |
| TCTGGTACATTCTGATTCTT+TGG | - | chr5.4:4605195-4605214 | MS.gene019309:intron | 35.0% | |
| ! | ACACTTTCGATTAGAAGTGT+CGG | - | chr5.4:4604332-4604351 | MS.gene019309:intron | 35.0% |
| ! | CAAGATAGAGGCATATGATA+AGG | - | chr5.4:4606578-4606597 | MS.gene019309:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.4:4605770-4605789 | None:intergenic | 35.0% |
| ! | CTTCATTGAGCACTTTGAAA+AGG | + | chr5.4:4603600-4603619 | None:intergenic | 35.0% |
| ! | CTTTGAGTTATATGTCCCTA+TGG | - | chr5.4:4606446-4606465 | MS.gene019309:intron | 35.0% |
| ! | GAAATTTTGCCCTTGAACTT+TGG | + | chr5.4:4606320-4606339 | None:intergenic | 35.0% |
| ! | GACCTCTAAATCTTTTCGAA+TGG | - | chr5.4:4605789-4605808 | MS.gene019309:CDS | 35.0% |
| ! | TGTAGGTAAAGAAAGAGTAC+GGG | + | chr5.4:4605590-4605609 | None:intergenic | 35.0% |
| ! | TTCTTTTTATCAGCAGCAGA+AGG | + | chr5.4:4606793-4606812 | None:intergenic | 35.0% |
| !! | AAAGAATTAGGTCGATTTGC+GGG | - | chr5.4:4606537-4606556 | MS.gene019309:intron | 35.0% |
| !! | ACCTGGTAAAAAGCATCTTA+AGG | + | chr5.4:4605239-4605258 | None:intergenic | 35.0% |
| !! | ACCTTAAGATGCTTTTTACC+AGG | - | chr5.4:4605235-4605254 | MS.gene019309:intron | 35.0% |
| !! | CAAAGAATTAGGTCGATTTG+CGG | - | chr5.4:4606536-4606555 | MS.gene019309:intron | 35.0% |
| !! | CTTTTCAAAGTGCTCAATGA+AGG | - | chr5.4:4603598-4603617 | MS.gene019309:CDS | 35.0% |
| !! | GTAAAAAGCATCTTAAGGTC+AGG | + | chr5.4:4605234-4605253 | None:intergenic | 35.0% |
| !! | TTAAGGGTAATAAAGCACTG+TGG | + | chr5.4:4604153-4604172 | None:intergenic | 35.0% |
| AAAATGTTAACCTGTTCCCC+GGG | - | chr5.4:4603902-4603921 | MS.gene019309:CDS | 40.0% | |
| ACCCCAAGTGATGCATAATT+AGG | - | chr5.4:4604651-4604670 | MS.gene019309:CDS | 40.0% | |
| ACTTTGCAAGCTGATGTAGA+TGG | - | chr5.4:4606982-4607001 | MS.gene019309:intron | 40.0% | |
| AGAAGCAGCTGTGATATCTA+TGG | - | chr5.4:4605968-4605987 | MS.gene019309:CDS | 40.0% | |
| AGAGACACAGATTTGAATGC+AGG | - | chr5.4:4607090-4607109 | MS.gene019309:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr5.4:4605841-4605860 | None:intergenic | 40.0% | |
| ATAAATCTTGCAAAGCAGCC+TGG | - | chr5.4:4606179-4606198 | MS.gene019309:intron | 40.0% | |
| ATAGACTATGAGACAAACCC+AGG | + | chr5.4:4605052-4605071 | None:intergenic | 40.0% | |
| CAATTTGACTGCTATGGTTG+GGG | - | chr5.4:4606115-4606134 | MS.gene019309:intron | 40.0% | |
| CCAACCATAGCAGTCAAATT+GGG | + | chr5.4:4606116-4606135 | None:intergenic | 40.0% | |
| CCAAGTGATGCATAATTAGG+TGG | - | chr5.4:4604654-4604673 | MS.gene019309:CDS | 40.0% | |
| CCAATTTGACTGCTATGGTT+GGG | - | chr5.4:4606114-4606133 | MS.gene019309:intron | 40.0% | |
| CCACCTAATTATGCATCACT+TGG | + | chr5.4:4604657-4604676 | None:intergenic | 40.0% | |
| GAAAATGTTAACCTGTTCCC+CGG | - | chr5.4:4603901-4603920 | MS.gene019309:CDS | 40.0% | |
| GAAGCAGCTGTGATATCTAT+GGG | - | chr5.4:4605969-4605988 | MS.gene019309:CDS | 40.0% | |
| GAAGTTGGGGACTATCATTA+AGG | - | chr5.4:4604822-4604841 | MS.gene019309:intron | 40.0% | |
| GATTGATGGAAAAGCTAGCA+AGG | - | chr5.4:4604741-4604760 | MS.gene019309:CDS | 40.0% | |
| GATTTATTAAGCTACCCCCA+TGG | + | chr5.4:4606166-4606185 | None:intergenic | 40.0% | |
| TCTAAACTTCTCTGCGAACT+TGG | - | chr5.4:4603663-4603682 | MS.gene019309:CDS | 40.0% | |
| TGTTCACAGCAATGCTGTTA+TGG | - | chr5.4:4604950-4604969 | MS.gene019309:intron | 40.0% | |
| ! | TGTAATCACATGTGTCACTC+TGG | - | chr5.4:4604271-4604290 | MS.gene019309:intron | 40.0% |
| !! | AGGAAAGCTTTCTGAAGTTC+AGG | - | chr5.4:4603618-4603637 | MS.gene019309:CDS | 40.0% |
| !! | GCAGCTAGTTTGTTGATTGA+TGG | - | chr5.4:4604727-4604746 | MS.gene019309:CDS | 40.0% |
| AAATGTTAACCTGTTCCCCG+GGG | - | chr5.4:4603903-4603922 | MS.gene019309:CDS | 45.0% | |
| AAGGATAGAAAGAAGGGAGC+TGG | - | chr5.4:4606597-4606616 | MS.gene019309:intron | 45.0% | |
| ACCTACTGAGAATACTGAGG+TGG | - | chr5.4:4607062-4607081 | MS.gene019309:intron | 45.0% | |
| ACTTGACAGACCTTGCGTAT+TGG | + | chr5.4:4605394-4605413 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.4:4605857-4605876 | None:intergenic | 45.0% | |
| AGATGGTGAAGACAACACCA+TGG | - | chr5.4:4606391-4606410 | MS.gene019309:intron | 45.0% | |
| AGCAGTCAAATTGGGTGCAA+TGG | + | chr5.4:4606108-4606127 | None:intergenic | 45.0% | |
| AGCTGAGAAGGCTCTCTTTA+GGG | - | chr5.4:4606223-4606242 | MS.gene019309:intron | 45.0% | |
| AGCTGTAGCTGATACGAAGT+TGG | - | chr5.4:4604807-4604826 | MS.gene019309:CDS | 45.0% | |
| AGGACTGATAACTCCTGCTA+AGG | - | chr5.4:4606620-4606639 | MS.gene019309:intron | 45.0% | |
| ATACCATTCTCGAACCCTCA+TGG | + | chr5.4:4605327-4605346 | None:intergenic | 45.0% | |
| ATGAGGGTTCGAGAATGGTA+TGG | - | chr5.4:4605326-4605345 | MS.gene019309:CDS | 45.0% | |
| CAAGCAGCTCCAAAGTTCAA+GGG | - | chr5.4:4606308-4606327 | MS.gene019309:intron | 45.0% | |
| CAGTTGACGGAACTCATAAC+TGG | - | chr5.4:4604996-4605015 | MS.gene019309:intron | 45.0% | |
| CATTATCACAATGAGCACGC+AGG | + | chr5.4:4604780-4604799 | None:intergenic | 45.0% | |
| CCCAACCATAGCAGTCAAAT+TGG | + | chr5.4:4606117-4606136 | None:intergenic | 45.0% | |
| CCCAATTTGACTGCTATGGT+TGG | - | chr5.4:4606113-4606132 | MS.gene019309:intron | 45.0% | |
| CTGTAGCTGATACGAAGTTG+GGG | - | chr5.4:4604809-4604828 | MS.gene019309:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.4:4605847-4605866 | None:intergenic | 45.0% | |
| GATGGTGAAGACAACACCAT+GGG | - | chr5.4:4606392-4606411 | MS.gene019309:intron | 45.0% | |
| GATTTGCGGGTTCTGCTAAA+GGG | - | chr5.4:4606550-4606569 | MS.gene019309:intron | 45.0% | |
| GCTGTAGCTGATACGAAGTT+GGG | - | chr5.4:4604808-4604827 | MS.gene019309:CDS | 45.0% | |
| GGAACCTACTGAGAATACTG+AGG | - | chr5.4:4607059-4607078 | MS.gene019309:intron | 45.0% | |
| GTTGAAGTTCAGTGCAGACA+AGG | - | chr5.4:4605082-4605101 | MS.gene019309:intron | 45.0% | |
| TAAAGGGAAGCCCAAGATAG+AGG | - | chr5.4:4606566-4606585 | MS.gene019309:intron | 45.0% | |
| TCAAGCAGCTCCAAAGTTCA+AGG | - | chr5.4:4606307-4606326 | MS.gene019309:intron | 45.0% | |
| TCCACCTCAGTATTCTCAGT+AGG | + | chr5.4:4607066-4607085 | None:intergenic | 45.0% | |
| TGAAGACAACACCATGGGAT+TGG | - | chr5.4:4606397-4606416 | MS.gene019309:intron | 45.0% | |
| TGCAAAGCTTGATTTCTCCG+AGG | - | chr5.4:4605436-4605455 | MS.gene019309:CDS | 45.0% | |
| TGCACCCAATTTGACTGCTA+TGG | - | chr5.4:4606109-4606128 | MS.gene019309:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.4:4605701-4605720 | MS.gene019309:CDS | 45.0% |
| ! | AGTACTGTTTGAAACCCCTG+CGG | - | chr5.4:4603567-4603586 | MS.gene019309:CDS | 45.0% |
| ! | ATGGAAGGAGTTTTCCAGTG+CGG | - | chr5.4:4604470-4604489 | MS.gene019309:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.4:4605700-4605719 | MS.gene019309:CDS | 45.0% |
| !! | CAAAGACAGCATTGGCTATC+AGG | - | chr5.4:4606354-4606373 | MS.gene019309:intron | 45.0% |
| !! | GCAAGGTCTGTCAAGTTGAT+GGG | - | chr5.4:4605398-4605417 | MS.gene019309:CDS | 45.0% |
| ACCAATAGCCTGGACGATCA+TGG | + | chr5.4:4605267-4605286 | None:intergenic | 50.0% | |
| ACCATGATCGTCCAGGCTAT+TGG | - | chr5.4:4605263-4605282 | MS.gene019309:intron | 50.0% | |
| AGAATCTGCACGGTACTACC+AGG | + | chr5.4:4606200-4606219 | None:intergenic | 50.0% | |
| AGCTGATGTAGATGGTGACC+AGG | - | chr5.4:4606990-4607009 | MS.gene019309:intron | 50.0% | |
| AGGTGTGATGCACTTGGAGA+TGG | - | chr5.4:4606374-4606393 | MS.gene019309:intron | 50.0% | |
| ATGCCATGAGGGTTCGAGAA+TGG | - | chr5.4:4605321-4605340 | MS.gene019309:CDS | 50.0% | |
| CAATGACACATGTCAGACGC+TGG | - | chr5.4:4604307-4604326 | MS.gene019309:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.4:4605702-4605721 | None:intergenic | 50.0% | |
| CGATTTGCGGGTTCTGCTAA+AGG | - | chr5.4:4606549-4606568 | MS.gene019309:intron | 50.0% | |
| CGTCGAGTAAACCAATAGCC+TGG | + | chr5.4:4605277-4605296 | None:intergenic | 50.0% | |
| CTCAGCTCCAAGAATCTGCA+CGG | + | chr5.4:4606210-4606229 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.4:4605705-4605724 | MS.gene019309:CDS | 50.0% | |
| GAGCTGAGAAGGCTCTCTTT+AGG | - | chr5.4:4606222-4606241 | MS.gene019309:intron | 50.0% | |
| GATAGAAAGAAGGGAGCTGG+AGG | - | chr5.4:4606600-4606619 | MS.gene019309:intron | 50.0% | |
| GCAGATTCTTGGAGCTGAGA+AGG | - | chr5.4:4606211-4606230 | MS.gene019309:intron | 50.0% | |
| GCTATCAGGTGTGATGCACT+TGG | - | chr5.4:4606368-4606387 | MS.gene019309:intron | 50.0% | |
| GCTGTTATGGAGCTAATGCG+AGG | - | chr5.4:4604963-4604982 | MS.gene019309:intron | 50.0% | |
| GGCATATCAGCAGCATCTTC+AGG | + | chr5.4:4607150-4607169 | None:intergenic | 50.0% | |
| GGTAGTACCGTGCAGATTCT+TGG | - | chr5.4:4606200-4606219 | MS.gene019309:intron | 50.0% | |
| TGAGACAAACCCAGGCTCAT+CGG | + | chr5.4:4605044-4605063 | None:intergenic | 50.0% | |
| ! | CACATGTGTCACTCTGGTGT+TGG | - | chr5.4:4604277-4604296 | MS.gene019309:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.4:4605699-4605718 | MS.gene019309:CDS | 50.0% |
| ! | GAAAGAGTACGGGCTTTGTG+TGG | + | chr5.4:4605580-4605599 | None:intergenic | 50.0% |
| ! | GCTTGCTGCAAAGACAGCAT+TGG | - | chr5.4:4606346-4606365 | MS.gene019309:intron | 50.0% |
| ! | GTACTGTTTGAAACCCCTGC+GGG | - | chr5.4:4603568-4603587 | MS.gene019309:CDS | 50.0% |
| !! | CAACTTCATGTTCTGGCTCC+TGG | + | chr5.4:4607011-4607030 | None:intergenic | 50.0% |
| !! | CGCAAGGTCTGTCAAGTTGA+TGG | - | chr5.4:4605397-4605416 | MS.gene019309:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.4:4605713-4605732 | MS.gene019309:CDS | 55.0% | |
| AGCAGCATCTTCAGGCTCTG+AGG | + | chr5.4:4607142-4607161 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.4:4605714-4605733 | None:intergenic | 55.0% | |
| CAGTGCGGATGCTGCAAGAA+AGG | - | chr5.4:4604485-4604504 | MS.gene019309:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.4:4605707-4605726 | None:intergenic | 55.0% | |
| CTTTCTTGCAGCATCCGCAC+TGG | + | chr5.4:4604487-4604506 | None:intergenic | 55.0% | |
| GAGCCATGTCTTGAACAGCG+AGG | + | chr5.4:4605022-4605041 | None:intergenic | 55.0% | |
| GCGCGATTGAGGAATCTCGA+AGG | - | chr5.4:4606513-4606532 | MS.gene019309:intron | 55.0% | |
| GCTATGGTTGGGGAGCTTGT+TGG | - | chr5.4:4606125-4606144 | MS.gene019309:intron | 55.0% | |
| GGCTCTGTTCTCCAATCCCA+TGG | + | chr5.4:4606411-4606430 | None:intergenic | 55.0% | |
| GGGATTGGAGAACAGAGCCA+AGG | - | chr5.4:4606412-4606431 | MS.gene019309:intron | 55.0% | |
| GGGTTCGAGAATGGTATGGC+TGG | - | chr5.4:4605330-4605349 | MS.gene019309:CDS | 55.0% | |
| GGTTGACACCATGATCGTCC+AGG | - | chr5.4:4605256-4605275 | MS.gene019309:intron | 55.0% | |
| GTTGTGTTAACCGGTGCCTC+CGG | + | chr5.4:4604060-4604079 | None:intergenic | 55.0% | |
| TGAAAAGGGCGAAACCCGCA+GGG | + | chr5.4:4603585-4603604 | None:intergenic | 55.0% | |
| TGCAGCTTGAAGCGCGATTG+AGG | - | chr5.4:4606502-4606521 | MS.gene019309:intron | 55.0% | |
| TGCTTCCTTAACCAGTGCCC+CGG | + | chr5.4:4603923-4603942 | None:intergenic | 55.0% | |
| TGGCCTCGCTGTTCAAGACA+TGG | - | chr5.4:4605016-4605035 | MS.gene019309:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.4:4605713-4605732 | None:intergenic | 55.0% | |
| TTGAAAAGGGCGAAACCCGC+AGG | + | chr5.4:4603586-4603605 | None:intergenic | 55.0% | |
| TTGTGTTAACCGGTGCCTCC+GGG | + | chr5.4:4604059-4604078 | None:intergenic | 55.0% | |
| ! | GGACGATCATGGTGTCAACC+TGG | + | chr5.4:4605256-4605275 | None:intergenic | 55.0% |
| AGACATGGCTCCGATGAGCC+TGG | - | chr5.4:4605031-4605050 | MS.gene019309:intron | 60.0% | |
| AGCTACCCCCATGGGCAATG+AGG | + | chr5.4:4606157-4606176 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | + | chr5.4:4603921-4603940 | None:intergenic | 60.0% | |
| GAAAAGGGCGAAACCCGCAG+GGG | + | chr5.4:4603584-4603603 | None:intergenic | 60.0% | |
| GACATGGCTCCGATGAGCCT+GGG | - | chr5.4:4605032-4605051 | MS.gene019309:intron | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | + | chr5.4:4603922-4603941 | None:intergenic | 60.0% | |
| GTGCTCGCCTCATTGCCCAT+GGG | - | chr5.4:4606147-4606166 | MS.gene019309:intron | 60.0% | |
| TGCTCGCCTCATTGCCCATG+GGG | - | chr5.4:4606148-4606167 | MS.gene019309:intron | 60.0% | |
| TGTGTTAACCGGTGCCTCCG+GGG | + | chr5.4:4604058-4604077 | None:intergenic | 60.0% | |
| GCTCGCCTCATTGCCCATGG+GGG | - | chr5.4:4606149-4606168 | MS.gene019309:intron | 65.0% | |
| GGTGCTCGCCTCATTGCCCA+TGG | - | chr5.4:4606146-4606165 | MS.gene019309:intron | 65.0% | |
| TAACCAGTGCCCCGGGGAAC+AGG | + | chr5.4:4603915-4603934 | None:intergenic | 65.0% | |
| TAACCTGTTCCCCGGGGCAC+TGG | - | chr5.4:4603909-4603928 | MS.gene019309:CDS | 65.0% | |
| TTAACCAGTGCCCCGTGCCC+CGG | - | chr5.4:4604038-4604057 | MS.gene019309:intron | 65.0% | |
| !! | GTTCCCCGGGGCACTGGTTA+AGG | - | chr5.4:4603915-4603934 | MS.gene019309:CDS | 65.0% |
| TAACCGGTGCCTCCGGGGCA+CGG | + | chr5.4:4604053-4604072 | None:intergenic | 70.0% | |
| !! | GGGGCACGGGGCACTGGTTA+AGG | + | chr5.4:4604039-4604058 | None:intergenic | 70.0% |
| AACCGGTGCCTCCGGGGCAC+GGG | + | chr5.4:4604052-4604071 | None:intergenic | 75.0% | |
| ! | ACCAGTGCCCCGTGCCCCGG+AGG | - | chr5.4:4604041-4604060 | MS.gene019309:intron | 80.0% |
| ! | ACCGGTGCCTCCGGGGCACG+GGG | + | chr5.4:4604051-4604070 | None:intergenic | 80.0% |
| ! | GCCTCCGGGGCACGGGGCAC+TGG | + | chr5.4:4604045-4604064 | None:intergenic | 85.0% |
| !! | GCCCCGTGCCCCGGAGGCAC+CGG | - | chr5.4:4604047-4604066 | MS.gene019309:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 4603562 | 4607212 | 4603562 | ID=MS.gene019309 |
| chr5.4 | mRNA | 4603562 | 4607212 | 4603562 | ID=MS.gene019309.t1;Parent=MS.gene019309 |
| chr5.4 | exon | 4607135 | 4607212 | 4607135 | ID=MS.gene019309.t1.exon1;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4607135 | 4607212 | 4607135 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4606268 | 4606309 | 4606268 | ID=MS.gene019309.t1.exon2;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4606268 | 4606309 | 4606268 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4605922 | 4606101 | 4605922 | ID=MS.gene019309.t1.exon3;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4605922 | 4606101 | 4605922 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4605671 | 4605835 | 4605671 | ID=MS.gene019309.t1.exon4;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4605671 | 4605835 | 4605671 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4605317 | 4605517 | 4605317 | ID=MS.gene019309.t1.exon5;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4605317 | 4605517 | 4605317 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4604341 | 4604838 | 4604341 | ID=MS.gene019309.t1.exon6;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4604341 | 4604838 | 4604341 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4604133 | 4604267 | 4604133 | ID=MS.gene019309.t1.exon7;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4604133 | 4604267 | 4604133 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| chr5.4 | exon | 4603562 | 4604056 | 4603562 | ID=MS.gene019309.t1.exon8;Parent=MS.gene019309.t1 |
| chr5.4 | CDS | 4603562 | 4604056 | 4603562 | ID=cds.MS.gene019309.t1;Parent=MS.gene019309.t1 |
| Gene Sequence |
| Protein sequence |
