Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072782.t1 | XP_003611088.1 | 99.3 | 444 | 3 | 0 | 1 | 444 | 1 | 444 | 2.50E-244 | 854.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072782.t1 | O04658 | 81.5 | 444 | 82 | 0 | 1 | 444 | 1 | 444 | 1.6e-207 | 723.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072782.t1 | G7KC30 | 99.3 | 444 | 3 | 0 | 1 | 444 | 1 | 444 | 1.8e-244 | 854.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene072782 | 0.816752 | 4.70E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene072782 | 0.823344 | 1.46E-53 | -1.69E-46 |
| MS.gene049825 | MS.gene072782 | 0.83688 | 7.22E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene072782 | 0.83175 | 1.40E-55 | -1.69E-46 |
| MS.gene050277 | MS.gene072782 | 0.845088 | 5.05E-59 | -1.69E-46 |
| MS.gene050303 | MS.gene072782 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene072782 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene051330 | MS.gene072782 | 0.815545 | 8.75E-52 | -1.69E-46 |
| MS.gene05134 | MS.gene072782 | 0.822176 | 2.72E-53 | -1.69E-46 |
| MS.gene051451 | MS.gene072782 | 0.859215 | 4.83E-63 | -1.69E-46 |
| MS.gene051700 | MS.gene072782 | 0.82529 | 5.08E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene072782 | 0.878308 | 3.12E-69 | -1.69E-46 |
| MS.gene051903 | MS.gene072782 | 0.807512 | 4.88E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene072782 | 0.849844 | 2.49E-60 | -1.69E-46 |
| MS.gene052947 | MS.gene072782 | 0.824845 | 6.47E-54 | -1.69E-46 |
| MS.gene053058 | MS.gene072782 | 0.817626 | 2.99E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene072782 | 0.815404 | 9.41E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene072782 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene072782 | 0.832277 | 1.04E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene072782 | 0.827992 | 1.15E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene072782 | 0.808363 | 3.21E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene072782 | 0.811602 | 6.45E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene072782 | 0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene072782 | 0.845576 | 3.73E-59 | -1.69E-46 |
| MS.gene056091 | MS.gene072782 | 0.855055 | 8.15E-62 | -1.69E-46 |
| MS.gene056215 | MS.gene072782 | 0.82462 | 7.31E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene072782 | 0.868368 | 6.88E-66 | -1.69E-46 |
| MS.gene056605 | MS.gene072782 | 0.862488 | 4.89E-64 | -1.69E-46 |
| MS.gene056631 | MS.gene072782 | 0.858057 | 1.07E-62 | -1.69E-46 |
| MS.gene05689 | MS.gene072782 | 0.829949 | 3.87E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene072782 | 0.837365 | 5.43E-57 | -1.69E-46 |
| MS.gene057094 | MS.gene072782 | 0.832685 | 8.21E-56 | -1.69E-46 |
| MS.gene057705 | MS.gene072782 | 0.840619 | 7.80E-58 | -1.69E-46 |
| MS.gene059146 | MS.gene072782 | 0.803119 | 4.06E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene072782 | 0.825765 | 3.92E-54 | -1.69E-46 |
| MS.gene059830 | MS.gene072782 | 0.825515 | 4.49E-54 | -1.69E-46 |
| MS.gene059935 | MS.gene072782 | 0.834552 | 2.81E-56 | -1.69E-46 |
| MS.gene06001 | MS.gene072782 | 0.875482 | 2.98E-68 | -1.69E-46 |
| MS.gene06011 | MS.gene072782 | 0.842169 | 3.05E-58 | -1.69E-46 |
| MS.gene060365 | MS.gene072782 | 0.804592 | 2.01E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene072782 | 0.860159 | 2.51E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene072782 | 0.838252 | 3.21E-57 | -1.69E-46 |
| MS.gene060763 | MS.gene072782 | 0.845694 | 3.46E-59 | -1.69E-46 |
| MS.gene060830 | MS.gene072782 | 0.909651 | 4.50E-82 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072782.t1 | MTR_5g010260 | 97.655 | 597 | 7 | 2 | 1 | 597 | 1 | 590 | 0.0 | 1166 |
| MS.gene072782.t1 | MTR_4g070910 | 90.909 | 462 | 42 | 0 | 1 | 462 | 1 | 462 | 0.0 | 855 |
| MS.gene072782.t1 | MTR_4g103790 | 43.137 | 408 | 215 | 5 | 1 | 393 | 3 | 408 | 9.51e-102 | 318 |
| MS.gene072782.t1 | MTR_5g010290 | 78.261 | 138 | 28 | 1 | 26 | 161 | 9 | 146 | 3.21e-67 | 215 |
| MS.gene072782.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 34 | 256 | 1.19e-29 | 122 |
| MS.gene072782.t1 | MTR_7g037560 | 31.839 | 223 | 151 | 1 | 159 | 380 | 95 | 317 | 1.55e-29 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072782.t1 | AT5G27120 | 81.532 | 444 | 82 | 0 | 1 | 444 | 1 | 444 | 0.0 | 766 |
| MS.gene072782.t1 | AT3G05060 | 80.313 | 447 | 88 | 0 | 1 | 447 | 2 | 448 | 0.0 | 761 |
| MS.gene072782.t1 | AT5G27140 | 63.146 | 426 | 121 | 3 | 1 | 425 | 1 | 391 | 0.0 | 522 |
| MS.gene072782.t1 | AT5G27140 | 57.959 | 490 | 142 | 6 | 1 | 485 | 1 | 431 | 0.0 | 519 |
| MS.gene072782.t1 | AT1G56110 | 44.390 | 410 | 207 | 6 | 1 | 393 | 3 | 408 | 2.58e-111 | 343 |
| MS.gene072782.t1 | AT3G12860 | 43.171 | 410 | 212 | 6 | 1 | 393 | 3 | 408 | 4.79e-107 | 331 |
| MS.gene072782.t1 | AT1G60170 | 28.972 | 214 | 152 | 0 | 159 | 372 | 95 | 308 | 5.34e-22 | 100 |
Find 122 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATATATAAGACCATATT+TGG | 0.164834 | 5.3:+3932981 | None:intergenic |
| ACTTCTTTACACAGGATTTA+TGG | 0.208613 | 5.3:-3934798 | MS.gene072782:intron |
| AAAGAAGGAAAAGAAGAAAA+AGG | 0.214928 | 5.3:-3932433 | MS.gene072782:CDS |
| AAAGAAAGAAAAGAAGAAAA+AGG | 0.230780 | 5.3:-3932313 | MS.gene072782:CDS |
| CCCAACCATAGCAGTCAAAT+TGG | 0.271023 | 5.3:+3933137 | None:intergenic |
| CTGATATATTCTCAAACTTC+TGG | 0.278126 | 5.3:+3934556 | None:intergenic |
| CAAAGACAGCATTGGCTATC+AGG | 0.281768 | 5.3:-3932897 | MS.gene072782:CDS |
| TGAAATTGGTGAACTAGATT+TGG | 0.330351 | 5.3:-3933256 | MS.gene072782:CDS |
| GAGCTGAGAAGGCTCTCTTT+AGG | 0.330425 | 5.3:-3933029 | MS.gene072782:CDS |
| AGAAGCAGCTGTGATATCTA+TGG | 0.331075 | 5.3:-3933283 | MS.gene072782:CDS |
| AGCTGAGAAGGCTCTCTTTA+GGG | 0.345329 | 5.3:-3933028 | MS.gene072782:CDS |
| GGCATATCAGCAGCATCTTC+AGG | 0.352795 | 5.3:+3932102 | None:intergenic |
| GGTAGTACCGTGCAGATTCT+TGG | 0.357226 | 5.3:-3933051 | MS.gene072782:CDS |
| TTATCATATGCCTCTATCTT+GGG | 0.358705 | 5.3:+3932673 | None:intergenic |
| AGGAAAGCTTTCTGAAGTTC+AGG | 0.363092 | 5.3:-3935605 | MS.gene072782:intron |
| ATATCTATGGGTACTGAAAT+TGG | 0.363730 | 5.3:-3933270 | MS.gene072782:CDS |
| ACCATGATCGTCCAGGCTAT+TGG | 0.367547 | 5.3:-3933985 | MS.gene072782:CDS |
| GCAGCTAGTTTGTTGATTGA+TGG | 0.370776 | 5.3:-3934522 | MS.gene072782:CDS |
| CTTATCATATGCCTCTATCT+TGG | 0.380405 | 5.3:+3932672 | None:intergenic |
| CAACTTCATGTTCTGGCTCC+TGG | 0.380541 | 5.3:+3932241 | None:intergenic |
| AATCTCGAAGGCAAAGAATT+AGG | 0.387421 | 5.3:-3932724 | MS.gene072782:CDS |
| AGAACTTACTAAAATCATTC+AGG | 0.388638 | 5.3:-3933887 | MS.gene072782:CDS |
| AAACATGCTACTCCCAAATA+TGG | 0.397940 | 5.3:-3932994 | MS.gene072782:CDS |
| ATATATCATGCATCATTGAT+TGG | 0.403489 | 5.3:-3932967 | MS.gene072782:CDS |
| CGCAAGGTCTGTCAAGTTGA+TGG | 0.404405 | 5.3:-3933851 | MS.gene072782:CDS |
| CTTCATTGAGCACTTTGAAA+AGG | 0.407262 | 5.3:+3935626 | None:intergenic |
| CGATTTGCGGGTTCTGCTAA+AGG | 0.412920 | 5.3:-3932700 | MS.gene072782:CDS |
| CCAATTTGACTGCTATGGTT+GGG | 0.414603 | 5.3:-3933137 | MS.gene072782:CDS |
| GCTATGGTTGGGGAGCTTGT+TGG | 0.416805 | 5.3:-3933126 | MS.gene072782:CDS |
| AAAGAATTAGGTCGATTTGC+GGG | 0.418834 | 5.3:-3932712 | MS.gene072782:CDS |
| TGTTCACAGCAATGCTGTTA+TGG | 0.427112 | 5.3:-3934299 | MS.gene072782:CDS |
| ACTTGACAGACCTTGCGTAT+TGG | 0.437943 | 5.3:+3933857 | None:intergenic |
| CAGTTGACGGAACTCATAAC+TGG | 0.440734 | 5.3:-3934253 | MS.gene072782:CDS |
| AAGGATAGAAAGAAGGGAGC+TGG | 0.441375 | 5.3:-3932652 | MS.gene072782:CDS |
| AGACATGGCTCCGATGAGCC+TGG | 0.442031 | 5.3:-3934218 | MS.gene072782:CDS |
| GCTGTAGCTGATACGAAGTT+GGG | 0.449844 | 5.3:-3934441 | MS.gene072782:CDS |
| AACAAAAGATATACCTTAGC+AGG | 0.456722 | 5.3:+3932616 | None:intergenic |
| TTCATTGAGCACTTTGAAAA+GGG | 0.457174 | 5.3:+3935627 | None:intergenic |
| GAAGTTGGGGACTATCATTA+AGG | 0.458948 | 5.3:-3934427 | MS.gene072782:CDS |
| AGTTCAAGGGCAAAATTTCT+CGG | 0.467618 | 5.3:-3932930 | MS.gene072782:CDS |
| CAGTGCGGATGCTGCAAGAA+AGG | 0.471034 | 5.3:-3934764 | MS.gene072782:intron |
| AGAAAAGAAGAAGAAAAGGA+AGG | 0.475695 | 5.3:-3932211 | MS.gene072782:CDS |
| GGCTCTGTTCTCCAATCCCA+TGG | 0.476474 | 5.3:+3932843 | None:intergenic |
| CTTTCTTGCAGCATCCGCAC+TGG | 0.482863 | 5.3:+3934765 | None:intergenic |
| AGCTGTAGCTGATACGAAGT+TGG | 0.485755 | 5.3:-3934442 | MS.gene072782:CDS |
| TTGAAAAGGGCGAAACCCGC+AGG | 0.486202 | 5.3:+3935640 | None:intergenic |
| CAAGATAGAGGCATATGATA+AGG | 0.489790 | 5.3:-3932671 | MS.gene072782:CDS |
| GTGCTCGCCTCATTGCCCAT+GGG | 0.492711 | 5.3:-3933104 | MS.gene072782:CDS |
| ATATGATAAGGATAGAAAGA+AGG | 0.493507 | 5.3:-3932659 | MS.gene072782:CDS |
| CCAACCATAGCAGTCAAATT+GGG | 0.494028 | 5.3:+3933138 | None:intergenic |
| CAATTTGACTGCTATGGTTG+GGG | 0.494927 | 5.3:-3933136 | MS.gene072782:CDS |
| GATTTGCGGGTTCTGCTAAA+GGG | 0.495464 | 5.3:-3932699 | MS.gene072782:CDS |
| TGATATATAAGACCATATTT+GGG | 0.499043 | 5.3:+3932982 | None:intergenic |
| TGAAGACAACACCATGGGAT+TGG | 0.499977 | 5.3:-3932854 | MS.gene072782:CDS |
| CCCAATTTGACTGCTATGGT+TGG | 0.502179 | 5.3:-3933138 | MS.gene072782:CDS |
| TGCACCCAATTTGACTGCTA+TGG | 0.506074 | 5.3:-3933142 | MS.gene072782:CDS |
| GGTGCTCGCCTCATTGCCCA+TGG | 0.506735 | 5.3:-3933105 | MS.gene072782:CDS |
| TCTATGATTATCTAAAGAGC+AGG | 0.507685 | 5.3:-3933176 | MS.gene072782:CDS |
| AATTAGGTGGTCAAATTGAA+AGG | 0.512138 | 5.3:-3934582 | MS.gene072782:intron |
| CAAAGAATTAGGTCGATTTG+CGG | 0.513905 | 5.3:-3932713 | MS.gene072782:CDS |
| ACCAATAGCCTGGACGATCA+TGG | 0.522254 | 5.3:+3933984 | None:intergenic |
| GCAGATTCTTGGAGCTGAGA+AGG | 0.524438 | 5.3:-3933040 | MS.gene072782:CDS |
| AGCAGTCAAATTGGGTGCAA+TGG | 0.533807 | 5.3:+3933146 | None:intergenic |
| AGAGACACAGATTTGAATGC+AGG | 0.535080 | 5.3:-3932159 | MS.gene072782:CDS |
| TAAAGGGAAGCCCAAGATAG+AGG | 0.536666 | 5.3:-3932683 | MS.gene072782:CDS |
| GACATGGCTCCGATGAGCCT+GGG | 0.541122 | 5.3:-3934217 | MS.gene072782:CDS |
| ATAAATCTTGCAAAGCAGCC+TGG | 0.545223 | 5.3:-3933072 | MS.gene072782:CDS |
| GGGTTCGAGAATGGTATGGC+TGG | 0.545668 | 5.3:-3933918 | MS.gene072782:CDS |
| ATGCCATGAGGGTTCGAGAA+TGG | 0.547091 | 5.3:-3933927 | MS.gene072782:CDS |
| TCAAGCAGCTCCAAAGTTCA+AGG | 0.549296 | 5.3:-3932944 | MS.gene072782:CDS |
| ATTCCGAAAGAGATAAAACT+TGG | 0.550920 | 5.3:+3933211 | None:intergenic |
| CGTCGAGTAAACCAATAGCC+TGG | 0.559795 | 5.3:+3933974 | None:intergenic |
| TATGATAAGGATAGAAAGAA+GGG | 0.562992 | 5.3:-3932658 | MS.gene072782:CDS |
| AGAATCTGCACGGTACTACC+AGG | 0.563552 | 5.3:+3933054 | None:intergenic |
| GAAGCAGCTGTGATATCTAT+GGG | 0.568328 | 5.3:-3933282 | MS.gene072782:CDS |
| GCTATCAGGTGTGATGCACT+TGG | 0.570354 | 5.3:-3932883 | MS.gene072782:CDS |
| TGCAGCTTGAAGCGCGATTG+AGG | 0.572330 | 5.3:-3932747 | MS.gene072782:intron |
| GCAAGGTCTGTCAAGTTGAT+GGG | 0.574951 | 5.3:-3933850 | MS.gene072782:CDS |
| CTTTACACAGGATTTATGGA+AGG | 0.579685 | 5.3:-3934794 | MS.gene072782:intron |
| TGAAAAGGGCGAAACCCGCA+GGG | 0.581689 | 5.3:+3935641 | None:intergenic |
| GCTTGCTGCAAAGACAGCAT+TGG | 0.582410 | 5.3:-3932905 | MS.gene072782:CDS |
| TGCTCGCCTCATTGCCCATG+GGG | 0.582657 | 5.3:-3933103 | MS.gene072782:CDS |
| TGAGACAAACCCAGGCTCAT+CGG | 0.584661 | 5.3:+3934208 | None:intergenic |
| ACTTTGCAAGCTGATGTAGA+TGG | 0.587306 | 5.3:-3932267 | MS.gene072782:CDS |
| ATACCATTCTCGAACCCTCA+TGG | 0.587900 | 5.3:+3933924 | None:intergenic |
| GATTGATGGAAAAGCTAGCA+AGG | 0.589549 | 5.3:-3934508 | MS.gene072782:CDS |
| ATGTTCCATTCCGCTCTAGT+CGG | 0.590834 | 5.3:+3932044 | None:intergenic |
| GATAGAAAGAAGGGAGCTGG+AGG | 0.601173 | 5.3:-3932649 | MS.gene072782:CDS |
| AGCTGATGTAGATGGTGACC+AGG | 0.610256 | 5.3:-3932259 | MS.gene072782:CDS |
| TCCACCTCAGTATTCTCAGT+AGG | 0.610509 | 5.3:+3932186 | None:intergenic |
| GGTTGACACCATGATCGTCC+AGG | 0.612729 | 5.3:-3933992 | MS.gene072782:CDS |
| AGGTGTGATGCACTTGGAGA+TGG | 0.614670 | 5.3:-3932877 | MS.gene072782:CDS |
| ATGTATTCAACTCTTTATCG+AGG | 0.616968 | 5.3:+3933950 | None:intergenic |
| AGGTATTCGATATCAGTTGA+CGG | 0.617598 | 5.3:-3934266 | MS.gene072782:CDS |
| GTTGAATACATATGCCATGA+GGG | 0.622022 | 5.3:-3933938 | MS.gene072782:CDS |
| CTCAGCTCCAAGAATCTGCA+CGG | 0.622477 | 5.3:+3933044 | None:intergenic |
| CAAGCAGCTCCAAAGTTCAA+GGG | 0.624371 | 5.3:-3932943 | MS.gene072782:CDS |
| ATGAGGGTTCGAGAATGGTA+TGG | 0.625343 | 5.3:-3933922 | MS.gene072782:CDS |
| GTACTGTTTGAAACCCCTGC+GGG | 0.629229 | 5.3:-3935655 | MS.gene072782:CDS |
| GAATATATCAGAAGCTACAG+AGG | 0.630088 | 5.3:-3934544 | MS.gene072782:CDS |
| AGGACTGATAACTCCTGCTA+AGG | 0.630812 | 5.3:-3932629 | MS.gene072782:intron |
| AGCAGCATCTTCAGGCTCTG+AGG | 0.630929 | 5.3:+3932110 | None:intergenic |
| TGGCCTCGCTGTTCAAGACA+TGG | 0.636384 | 5.3:-3934233 | MS.gene072782:CDS |
| GTTGAAGTTCAGTGCAGACA+AGG | 0.637677 | 5.3:-3934167 | MS.gene072782:intron |
| ACCTACTGAGAATACTGAGG+TGG | 0.641535 | 5.3:-3932187 | MS.gene072782:CDS |
| CTGTAGCTGATACGAAGTTG+GGG | 0.642131 | 5.3:-3934440 | MS.gene072782:CDS |
| ATAGACTATGAGACAAACCC+AGG | 0.642701 | 5.3:+3934200 | None:intergenic |
| AGGATAATATCCAATACGCA+AGG | 0.653312 | 5.3:-3933867 | MS.gene072782:CDS |
| GATGGTGAAGACAACACCAT+GGG | 0.656945 | 5.3:-3932859 | MS.gene072782:CDS |
| ATTGATGGAAAAGCTAGCAA+GGG | 0.667037 | 5.3:-3934507 | MS.gene072782:CDS |
| AGTTGAATACATATGCCATG+AGG | 0.670426 | 5.3:-3933939 | MS.gene072782:CDS |
| GGGATTGGAGAACAGAGCCA+AGG | 0.677522 | 5.3:-3932839 | MS.gene072782:intron |
| TGCAAAGCTTGATTTCTCAG+AGG | 0.684043 | 5.3:-3933812 | MS.gene072782:intron |
| GCTCGCCTCATTGCCCATGG+GGG | 0.687875 | 5.3:-3933102 | MS.gene072782:CDS |
| GCGCGATTGAGGAATCTCGA+AGG | 0.689896 | 5.3:-3932736 | MS.gene072782:CDS |
| CATTATCACAATGAGCACGC+AGG | 0.694162 | 5.3:+3934472 | None:intergenic |
| AGTACTGTTTGAAACCCCTG+CGG | 0.695414 | 5.3:-3935656 | MS.gene072782:CDS |
| GAAAAGGGCGAAACCCGCAG+GGG | 0.700713 | 5.3:+3935642 | None:intergenic |
| GCTGTTATGGAGCTAATGCG+AGG | 0.708635 | 5.3:-3934286 | MS.gene072782:CDS |
| AGATGGTGAAGACAACACCA+TGG | 0.721514 | 5.3:-3932860 | MS.gene072782:CDS |
| GGAACCTACTGAGAATACTG+AGG | 0.738690 | 5.3:-3932190 | MS.gene072782:CDS |
| GAGCCATGTCTTGAACAGCG+AGG | 0.799226 | 5.3:+3934230 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAACTAAAAAAAAAAAAAAA+AGG | + | chr5.3:3932551-3932570 | None:intergenic | 10.0% |
| !! | TAAATATTATTTGTTTAAAG+AGG | + | chr5.3:3934118-3934137 | None:intergenic | 10.0% |
| !! | TTTCCAAAAAAAAAAAAAAA+AGG | + | chr5.3:3932391-3932410 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAGGTGTAA+TGG | + | chr5.3:3932383-3932402 | None:intergenic | 15.0% |
| !!! | ACACCTTTTTTTTTTTTTTT+TGG | - | chr5.3:3932385-3932404 | MS.gene072782:CDS | 15.0% |
| !!! | TTTTTTTTCGATAATTGAAT+CGG | + | chr5.3:3935208-3935227 | None:intergenic | 15.0% |
| !! | AAAAAGAAAAGAAGAAGAAA+AGG | - | chr5.3:3935505-3935524 | MS.gene072782:intron | 20.0% |
| !! | AAAGAAAGAAAAGAAGAAAA+AGG | - | chr5.3:3935407-3935426 | MS.gene072782:intron | 20.0% |
| !! | ACCGAGTAATTAAAATTTAA+GGG | + | chr5.3:3932640-3932659 | None:intergenic | 20.0% |
| !! | ATGATATATAAGACCATATT+TGG | + | chr5.3:3934742-3934761 | None:intergenic | 20.0% |
| !! | ATGTAAAAGAGTAAAACAAT+TGG | + | chr5.3:3933962-3933981 | None:intergenic | 20.0% |
| !! | CAATTGAAGGATTTATAAAT+GGG | + | chr5.3:3933000-3933019 | None:intergenic | 20.0% |
| !! | TACCGAGTAATTAAAATTTA+AGG | + | chr5.3:3932641-3932660 | None:intergenic | 20.0% |
| !! | TGATAAAAAGAAAGAAAAGA+AGG | - | chr5.3:3935383-3935402 | MS.gene072782:intron | 20.0% |
| !! | TGATATATAAGACCATATTT+GGG | + | chr5.3:3934741-3934760 | None:intergenic | 20.0% |
| !! | TTCAAATTTCAAATGATCAT+CGG | + | chr5.3:3932722-3932741 | None:intergenic | 20.0% |
| !!! | ACCCTTAAATTTTAATTACT+CGG | - | chr5.3:3932636-3932655 | MS.gene072782:CDS | 20.0% |
| !!! | CAAAATCTGTAATATGTTTT+AGG | + | chr5.3:3934391-3934410 | None:intergenic | 20.0% |
| !!! | TGTAATATGTTTTAGGATAA+AGG | + | chr5.3:3934384-3934403 | None:intergenic | 20.0% |
| !!! | TTGTATCTTGTATGTTTTTA+AGG | - | chr5.3:3932322-3932341 | MS.gene072782:CDS | 20.0% |
| !!! | TTTGATTTACTCTTAAATCT+TGG | - | chr5.3:3934005-3934024 | MS.gene072782:intron | 20.0% |
| !!! | TTTTTTTTTTTGGAAAATCC+CGG | - | chr5.3:3932395-3932414 | MS.gene072782:CDS | 20.0% |
| ! | AAAAAAATCTGATTCTGCAA+TGG | - | chr5.3:3935221-3935240 | MS.gene072782:intron | 25.0% |
| ! | AAAAATGTGTAAGTGAAGTT+TGG | + | chr5.3:3934949-3934968 | None:intergenic | 25.0% |
| ! | AAACATCAAAAGTTTCTTAG+GGG | + | chr5.3:3933343-3933362 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAAAGGAGAAAA+AGG | - | chr5.3:3935296-3935315 | MS.gene072782:intron | 25.0% |
| ! | AAAGAAGGAAAAGAAGAAAA+AGG | - | chr5.3:3935287-3935306 | MS.gene072782:intron | 25.0% |
| ! | AAATGGATAAACATTTGCTT+CGG | + | chr5.3:3933630-3933649 | None:intergenic | 25.0% |
| ! | ACAAAAATCTAATACTGCAA+TGG | - | chr5.3:3935332-3935351 | MS.gene072782:intron | 25.0% |
| ! | AGAACTTACTAAAATCATTC+AGG | - | chr5.3:3933833-3933852 | MS.gene072782:CDS | 25.0% |
| ! | ATATATCATGCATCATTGAT+TGG | - | chr5.3:3934753-3934772 | MS.gene072782:intron | 25.0% |
| ! | ATATGATAAGGATAGAAAGA+AGG | - | chr5.3:3935061-3935080 | MS.gene072782:intron | 25.0% |
| ! | CAAACATCAAAAGTTTCTTA+GGG | + | chr5.3:3933344-3933363 | None:intergenic | 25.0% |
| ! | CAACAGAAGAAGAAAAAAAA+TGG | + | chr5.3:3933647-3933666 | None:intergenic | 25.0% |
| ! | CAAGCAAAAAGAAAGAAAAA+AGG | - | chr5.3:3935640-3935659 | MS.gene072782:CDS | 25.0% |
| ! | GCAATTGAAGGATTTATAAA+TGG | + | chr5.3:3933001-3933020 | None:intergenic | 25.0% |
| ! | TACCTACATGATTGAAAATA+CGG | - | chr5.3:3934074-3934093 | MS.gene072782:intron | 25.0% |
| ! | TATGAATTATAGCGATGTAT+GGG | - | chr5.3:3932584-3932603 | MS.gene072782:intron | 25.0% |
| ! | TATGATAAGGATAGAAAGAA+GGG | - | chr5.3:3935062-3935081 | MS.gene072782:intron | 25.0% |
| ! | TCAAACATCAAAAGTTTCTT+AGG | + | chr5.3:3933345-3933364 | None:intergenic | 25.0% |
| ! | TGATAAAAAGAAAGCAAAGA+AGG | - | chr5.3:3935272-3935291 | MS.gene072782:intron | 25.0% |
| ! | TGTGATGAAAAAAGATCAAA+TGG | + | chr5.3:3934338-3934357 | None:intergenic | 25.0% |
| !! | AGGTATATCTTTTGTTCATT+TGG | - | chr5.3:3935111-3935130 | MS.gene072782:intron | 25.0% |
| !! | TTGCATTTTCAGCTTATTTA+AGG | - | chr5.3:3932258-3932277 | MS.gene072782:CDS | 25.0% |
| !!! | CTTTTTTCTTTCTTTTTGCT+TGG | + | chr5.3:3935642-3935661 | None:intergenic | 25.0% |
| !!! | TGAATGATTTTAGTAAGTTC+TGG | + | chr5.3:3933834-3933853 | None:intergenic | 25.0% |
| !!! | TTCAGTTTTTTCAATTGCAA+TGG | - | chr5.3:3932190-3932209 | MS.gene072782:CDS | 25.0% |
| !!! | TTTGTTCATTTGGTATTGAT+TGG | - | chr5.3:3935121-3935140 | MS.gene072782:intron | 25.0% |
| !!! | TTTTTTTTTTGGAAAATCCC+GGG | - | chr5.3:3932396-3932415 | MS.gene072782:CDS | 25.0% |
| AAAAAAAGGGTTGTGTTAAC+CGG | + | chr5.3:3932537-3932556 | None:intergenic | 30.0% | |
| AACAAAAGATATACCTTAGC+AGG | + | chr5.3:3935107-3935126 | None:intergenic | 30.0% | |
| AACATCAAAAGTTTCTTAGG+GGG | + | chr5.3:3933342-3933361 | None:intergenic | 30.0% | |
| AACCATTCGAAAAGATTTAG+AGG | + | chr5.3:3934263-3934282 | None:intergenic | 30.0% | |
| AAGTTTGGTATAACAACCAT+AGG | + | chr5.3:3934934-3934953 | None:intergenic | 30.0% | |
| AATTAGGTGGTCAAATTGAA+AGG | - | chr5.3:3933138-3933157 | MS.gene072782:CDS | 30.0% | |
| ACTTCTTTACACAGGATTTA+TGG | - | chr5.3:3932922-3932941 | MS.gene072782:CDS | 30.0% | |
| AGAAAAGAAGAAGAAAAGGA+AGG | - | chr5.3:3935509-3935528 | MS.gene072782:intron | 30.0% | |
| AGTTTGGTATAACAACCATA+GGG | + | chr5.3:3934933-3934952 | None:intergenic | 30.0% | |
| ATGAATTATAGCGATGTATG+GGG | - | chr5.3:3932585-3932604 | MS.gene072782:intron | 30.0% | |
| ATGTAGGTAAAGAAAGAGTA+CGG | + | chr5.3:3934063-3934082 | None:intergenic | 30.0% | |
| ATGTATTCAACTCTTTATCG+AGG | + | chr5.3:3933773-3933792 | None:intergenic | 30.0% | |
| ATGTTGGCAATATTATGATG+GGG | - | chr5.3:3933031-3933050 | MS.gene072782:CDS | 30.0% | |
| ATTCCGAAAGAGATAAAACT+TGG | + | chr5.3:3934512-3934531 | None:intergenic | 30.0% | |
| ATTTGCAAACTTCTTTACAC+AGG | - | chr5.3:3932914-3932933 | MS.gene072782:CDS | 30.0% | |
| CTATGAATTATAGCGATGTA+TGG | - | chr5.3:3932583-3932602 | MS.gene072782:intron | 30.0% | |
| CTGATATATTCTCAAACTTC+TGG | + | chr5.3:3933167-3933186 | None:intergenic | 30.0% | |
| GACTATCATTAAGGAAAAAC+TGG | - | chr5.3:3933302-3933321 | MS.gene072782:CDS | 30.0% | |
| GATGAAAAAAGATCAAATGG+AGG | + | chr5.3:3934335-3934354 | None:intergenic | 30.0% | |
| GATGTTGGCAATATTATGAT+GGG | - | chr5.3:3933030-3933049 | MS.gene072782:CDS | 30.0% | |
| TCTATGATTATCTAAAGAGC+AGG | - | chr5.3:3934544-3934563 | MS.gene072782:CDS | 30.0% | |
| TGAAATTGGTGAACTAGATT+TGG | - | chr5.3:3934464-3934483 | MS.gene072782:CDS | 30.0% | |
| TGATGTTGGCAATATTATGA+TGG | - | chr5.3:3933029-3933048 | MS.gene072782:CDS | 30.0% | |
| TGTGTTCTATCAACCATATT+TGG | - | chr5.3:3934223-3934242 | MS.gene072782:CDS | 30.0% | |
| TTATCATATGCCTCTATCTT+GGG | + | chr5.3:3935050-3935069 | None:intergenic | 30.0% | |
| TTTGTTTAAAGAGGAATCAC+AGG | + | chr5.3:3934109-3934128 | None:intergenic | 30.0% | |
| ! | AACCGTATTTTCAATCATGT+AGG | + | chr5.3:3934079-3934098 | None:intergenic | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr5.3:3934280-3934299 | MS.gene072782:CDS | 30.0% |
| ! | TCTAGTTTGTAATCTATCAG+AGG | - | chr5.3:3932666-3932685 | MS.gene072782:CDS | 30.0% |
| ! | TTCATTGAGCACTTTGAAAA+GGG | + | chr5.3:3932096-3932115 | None:intergenic | 30.0% |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | - | chr5.3:3934270-3934289 | MS.gene072782:CDS | 30.0% |
| ! | TTTTTCACAACTTCATGTTC+TGG | + | chr5.3:3935489-3935508 | None:intergenic | 30.0% |
| !! | ATATCTATGGGTACTGAAAT+TGG | - | chr5.3:3934450-3934469 | MS.gene072782:CDS | 30.0% |
| !! | ATATGGTTGATAGAACACAA+TGG | + | chr5.3:3934222-3934241 | None:intergenic | 30.0% |
| !! | CATATTACAGATTTTGACAG+AGG | - | chr5.3:3934395-3934414 | MS.gene072782:intron | 30.0% |
| !! | TGACCAAGTTTTATCTCTTT+CGG | - | chr5.3:3934506-3934525 | MS.gene072782:CDS | 30.0% |
| !!! | AGGAACACTGTTTTTTTGTA+AGG | - | chr5.3:3932342-3932361 | MS.gene072782:CDS | 30.0% |
| !!! | TTTTTTCTTCTTCTGTTGTC+TGG | - | chr5.3:3933649-3933668 | MS.gene072782:intron | 30.0% |
| AAACATGCTACTCCCAAATA+TGG | - | chr5.3:3934726-3934745 | MS.gene072782:intron | 35.0% | |
| AAAGGAGAAAAAGGAAGAAG+AGG | - | chr5.3:3935305-3935324 | MS.gene072782:intron | 35.0% | |
| AATCTCGAAGGCAAAGAATT+AGG | - | chr5.3:3934996-3935015 | MS.gene072782:intron | 35.0% | |
| AATTGCGTGTTTACTGATGT+TGG | - | chr5.3:3933015-3933034 | MS.gene072782:CDS | 35.0% | |
| ACCTAATTATGCATCACTTG+GGG | + | chr5.3:3933126-3933145 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr5.3:3934251-3934270 | None:intergenic | 35.0% | |
| AGGATAATATCCAATACGCA+AGG | - | chr5.3:3933853-3933872 | MS.gene072782:CDS | 35.0% | |
| AGGTATTCGATATCAGTTGA+CGG | - | chr5.3:3933454-3933473 | MS.gene072782:intron | 35.0% | |
| AGTTCAAGGGCAAAATTTCT+CGG | - | chr5.3:3934790-3934809 | MS.gene072782:intron | 35.0% | |
| AGTTGAATACATATGCCATG+AGG | - | chr5.3:3933781-3933800 | MS.gene072782:intron | 35.0% | |
| ATCAGATCATGAAAGAACGT+AGG | + | chr5.3:3932880-3932899 | None:intergenic | 35.0% | |
| ATCAGTAAACACGCAATTGA+AGG | + | chr5.3:3933013-3933032 | None:intergenic | 35.0% | |
| ATGATGTCTGATTCATGACT+TGG | - | chr5.3:3932235-3932254 | MS.gene072782:CDS | 35.0% | |
| ATTGATGGAAAAGCTAGCAA+GGG | - | chr5.3:3933213-3933232 | MS.gene072782:CDS | 35.0% | |
| ATTTATTAAGCTACCCCCAT+GGG | + | chr5.3:3934634-3934653 | None:intergenic | 35.0% | |
| CACCTAATTATGCATCACTT+GGG | + | chr5.3:3933127-3933146 | None:intergenic | 35.0% | |
| CAGGAGAAAAGAAGAAAAAG+AGG | - | chr5.3:3935580-3935599 | MS.gene072782:intron | 35.0% | |
| CTTATCATATGCCTCTATCT+TGG | + | chr5.3:3935051-3935070 | None:intergenic | 35.0% | |
| CTTTACACAGGATTTATGGA+AGG | - | chr5.3:3932926-3932945 | MS.gene072782:CDS | 35.0% | |
| GAATATATCAGAAGCTACAG+AGG | - | chr5.3:3933176-3933195 | MS.gene072782:CDS | 35.0% | |
| GAGTAAAACAATTGGCAACA+CGG | + | chr5.3:3933954-3933973 | None:intergenic | 35.0% | |
| GTTCATATTACAGTGAACTG+TGG | - | chr5.3:3932834-3932853 | MS.gene072782:intron | 35.0% | |
| GTTGAATACATATGCCATGA+GGG | - | chr5.3:3933782-3933801 | MS.gene072782:intron | 35.0% | |
| TCAAAGTACAACAAGTACCT+TGG | + | chr5.3:3934901-3934920 | None:intergenic | 35.0% | |
| TCTGGTACATTCTGATTCTT+TGG | - | chr5.3:3933667-3933686 | MS.gene072782:intron | 35.0% | |
| ! | ACACATTCGATTAGAAGTGT+CGG | - | chr5.3:3932803-3932822 | MS.gene072782:intron | 35.0% |
| ! | CAAGATAGAGGCATATGATA+AGG | - | chr5.3:3935049-3935068 | MS.gene072782:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.3:3934239-3934258 | None:intergenic | 35.0% |
| ! | CTTCATTGAGCACTTTGAAA+AGG | + | chr5.3:3932097-3932116 | None:intergenic | 35.0% |
| ! | CTTTGAGTTATATGTCCCTA+TGG | - | chr5.3:3934915-3934934 | MS.gene072782:intron | 35.0% |
| ! | GAAATTTTGCCCTTGAACTT+TGG | + | chr5.3:3934789-3934808 | None:intergenic | 35.0% |
| ! | GACCTCTAAATCTTTTCGAA+TGG | - | chr5.3:3934258-3934277 | MS.gene072782:CDS | 35.0% |
| ! | TGTAGGTAAAGAAAGAGTAC+GGG | + | chr5.3:3934062-3934081 | None:intergenic | 35.0% |
| ! | TTCTTTTTATCAGCAGCAGA+AGG | + | chr5.3:3935264-3935283 | None:intergenic | 35.0% |
| !! | AAAGAATTAGGTCGATTTGC+GGG | - | chr5.3:3935008-3935027 | MS.gene072782:intron | 35.0% |
| !! | ACCTGGTAAAAAGCATCTTA+AGG | + | chr5.3:3933711-3933730 | None:intergenic | 35.0% |
| !! | ACCTTAAGATGCTTTTTACC+AGG | - | chr5.3:3933707-3933726 | MS.gene072782:intron | 35.0% |
| !! | CAAAGAATTAGGTCGATTTG+CGG | - | chr5.3:3935007-3935026 | MS.gene072782:intron | 35.0% |
| !! | CTTTTCAAAGTGCTCAATGA+AGG | - | chr5.3:3932095-3932114 | MS.gene072782:CDS | 35.0% |
| !! | GTAAAAAGCATCTTAAGGTC+AGG | + | chr5.3:3933706-3933725 | None:intergenic | 35.0% |
| !! | TTAAGGGTAATAAAGCACTG+TGG | + | chr5.3:3932624-3932643 | None:intergenic | 35.0% |
| !!! | TCCTTTTTTAGATACCTCAC+CGG | - | chr5.3:3932515-3932534 | MS.gene072782:CDS | 35.0% |
| ACCCCAAGTGATGCATAATT+AGG | - | chr5.3:3933122-3933141 | MS.gene072782:CDS | 40.0% | |
| ACTTTGCAAGCTGATGTAGA+TGG | - | chr5.3:3935453-3935472 | MS.gene072782:intron | 40.0% | |
| AGAAGCAGCTGTGATATCTA+TGG | - | chr5.3:3934437-3934456 | MS.gene072782:CDS | 40.0% | |
| AGAGACACAGATTTGAATGC+AGG | - | chr5.3:3935561-3935580 | MS.gene072782:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr5.3:3934310-3934329 | None:intergenic | 40.0% | |
| ATAAATCTTGCAAAGCAGCC+TGG | - | chr5.3:3934648-3934667 | MS.gene072782:intron | 40.0% | |
| ATAGACTATGAGACAAACCC+AGG | + | chr5.3:3933523-3933542 | None:intergenic | 40.0% | |
| CAATTTGACTGCTATGGTTG+GGG | - | chr5.3:3934584-3934603 | MS.gene072782:intron | 40.0% | |
| CCAACCATAGCAGTCAAATT+GGG | + | chr5.3:3934585-3934604 | None:intergenic | 40.0% | |
| CCAAGTGATGCATAATTAGG+TGG | - | chr5.3:3933125-3933144 | MS.gene072782:CDS | 40.0% | |
| CCAATTTGACTGCTATGGTT+GGG | - | chr5.3:3934583-3934602 | MS.gene072782:intron | 40.0% | |
| CCACCTAATTATGCATCACT+TGG | + | chr5.3:3933128-3933147 | None:intergenic | 40.0% | |
| GAAGCAGCTGTGATATCTAT+GGG | - | chr5.3:3934438-3934457 | MS.gene072782:CDS | 40.0% | |
| GAAGTTGGGGACTATCATTA+AGG | - | chr5.3:3933293-3933312 | MS.gene072782:CDS | 40.0% | |
| GATTGATGGAAAAGCTAGCA+AGG | - | chr5.3:3933212-3933231 | MS.gene072782:CDS | 40.0% | |
| GATTTATTAAGCTACCCCCA+TGG | + | chr5.3:3934635-3934654 | None:intergenic | 40.0% | |
| TCTAAACTTCTCTGCGAACT+TGG | - | chr5.3:3932160-3932179 | MS.gene072782:CDS | 40.0% | |
| TGCAAAGCTTGATTTCTCAG+AGG | - | chr5.3:3933908-3933927 | MS.gene072782:CDS | 40.0% | |
| TGTTCACAGCAATGCTGTTA+TGG | - | chr5.3:3933421-3933440 | MS.gene072782:intron | 40.0% | |
| ! | ACCGGTGAGGTATCTAAAAA+AGG | + | chr5.3:3932519-3932538 | None:intergenic | 40.0% |
| ! | TGTAATCACATGTGTCACTC+TGG | - | chr5.3:3932742-3932761 | MS.gene072782:CDS | 40.0% |
| !! | AGGAAAGCTTTCTGAAGTTC+AGG | - | chr5.3:3932115-3932134 | MS.gene072782:CDS | 40.0% |
| !! | GCAGCTAGTTTGTTGATTGA+TGG | - | chr5.3:3933198-3933217 | MS.gene072782:CDS | 40.0% |
| AAAATCCCGGGAACTGGTTA+AGG | - | chr5.3:3932408-3932427 | MS.gene072782:CDS | 45.0% | |
| AAGGATAGAAAGAAGGGAGC+TGG | - | chr5.3:3935068-3935087 | MS.gene072782:intron | 45.0% | |
| ACCTACTGAGAATACTGAGG+TGG | - | chr5.3:3935533-3935552 | MS.gene072782:intron | 45.0% | |
| ACTTGACAGACCTTGCGTAT+TGG | + | chr5.3:3933866-3933885 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr5.3:3934326-3934345 | None:intergenic | 45.0% | |
| AGATGGTGAAGACAACACCA+TGG | - | chr5.3:3934860-3934879 | MS.gene072782:intron | 45.0% | |
| AGCAGTCAAATTGGGTGCAA+TGG | + | chr5.3:3934577-3934596 | None:intergenic | 45.0% | |
| AGCTGAGAAGGCTCTCTTTA+GGG | - | chr5.3:3934692-3934711 | MS.gene072782:intron | 45.0% | |
| AGCTGTAGCTGATACGAAGT+TGG | - | chr5.3:3933278-3933297 | MS.gene072782:CDS | 45.0% | |
| AGGACTGATAACTCCTGCTA+AGG | - | chr5.3:3935091-3935110 | MS.gene072782:intron | 45.0% | |
| ATACCATTCTCGAACCCTCA+TGG | + | chr5.3:3933799-3933818 | None:intergenic | 45.0% | |
| ATGAGGGTTCGAGAATGGTA+TGG | - | chr5.3:3933798-3933817 | MS.gene072782:intron | 45.0% | |
| CAAGCAGCTCCAAAGTTCAA+GGG | - | chr5.3:3934777-3934796 | MS.gene072782:CDS | 45.0% | |
| CAGTTGACGGAACTCATAAC+TGG | - | chr5.3:3933467-3933486 | MS.gene072782:intron | 45.0% | |
| CATTATCACAATGAGCACGC+AGG | + | chr5.3:3933251-3933270 | None:intergenic | 45.0% | |
| CCCAACCATAGCAGTCAAAT+TGG | + | chr5.3:3934586-3934605 | None:intergenic | 45.0% | |
| CCCAATTTGACTGCTATGGT+TGG | - | chr5.3:3934582-3934601 | MS.gene072782:intron | 45.0% | |
| CTGTAGCTGATACGAAGTTG+GGG | - | chr5.3:3933280-3933299 | MS.gene072782:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr5.3:3934316-3934335 | None:intergenic | 45.0% | |
| GATGGTGAAGACAACACCAT+GGG | - | chr5.3:3934861-3934880 | MS.gene072782:intron | 45.0% | |
| GATTTGCGGGTTCTGCTAAA+GGG | - | chr5.3:3935021-3935040 | MS.gene072782:intron | 45.0% | |
| GCTGTAGCTGATACGAAGTT+GGG | - | chr5.3:3933279-3933298 | MS.gene072782:CDS | 45.0% | |
| GGAACCTACTGAGAATACTG+AGG | - | chr5.3:3935530-3935549 | MS.gene072782:intron | 45.0% | |
| GTTGAAGTTCAGTGCAGACA+AGG | - | chr5.3:3933553-3933572 | MS.gene072782:intron | 45.0% | |
| TAAAGGGAAGCCCAAGATAG+AGG | - | chr5.3:3935037-3935056 | MS.gene072782:intron | 45.0% | |
| TCAAGCAGCTCCAAAGTTCA+AGG | - | chr5.3:3934776-3934795 | MS.gene072782:CDS | 45.0% | |
| TCCACCTCAGTATTCTCAGT+AGG | + | chr5.3:3935537-3935556 | None:intergenic | 45.0% | |
| TGAAGACAACACCATGGGAT+TGG | - | chr5.3:3934866-3934885 | MS.gene072782:intron | 45.0% | |
| TGCACCCAATTTGACTGCTA+TGG | - | chr5.3:3934578-3934597 | MS.gene072782:CDS | 45.0% | |
| TGTCGCACAATGACACATGT+CGG | - | chr5.3:3932771-3932790 | MS.gene072782:intron | 45.0% | |
| TTGCTTCCTTAACCAGTTCC+CGG | + | chr5.3:3932417-3932436 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.3:3934173-3934192 | MS.gene072782:CDS | 45.0% |
| ! | AGTACTGTTTGAAACCCCTG+CGG | - | chr5.3:3932064-3932083 | MS.gene072782:CDS | 45.0% |
| ! | ATGGAAGGAGTTTTCCAGTG+CGG | - | chr5.3:3932941-3932960 | MS.gene072782:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.3:3934172-3934191 | MS.gene072782:CDS | 45.0% |
| !! | CAAAGACAGCATTGGCTATC+AGG | - | chr5.3:3934823-3934842 | MS.gene072782:intron | 45.0% |
| !! | GCAAGGTCTGTCAAGTTGAT+GGG | - | chr5.3:3933870-3933889 | MS.gene072782:CDS | 45.0% |
| !! | TTTTGGAAAATCCCGGGAAC+TGG | - | chr5.3:3932402-3932421 | MS.gene072782:CDS | 45.0% |
| !! | AACTAAAAAAAAAAAAAAAA+GGG | + | chr5.3:3932550-3932569 | None:intergenic | 5.0% |
| AAGGGTTGTGTTAACCGGTG+AGG | + | chr5.3:3932532-3932551 | None:intergenic | 50.0% | |
| ACCAATAGCCTGGACGATCA+TGG | + | chr5.3:3933739-3933758 | None:intergenic | 50.0% | |
| ACCATGATCGTCCAGGCTAT+TGG | - | chr5.3:3933735-3933754 | MS.gene072782:intron | 50.0% | |
| AGAATCTGCACGGTACTACC+AGG | + | chr5.3:3934669-3934688 | None:intergenic | 50.0% | |
| AGCTGATGTAGATGGTGACC+AGG | - | chr5.3:3935461-3935480 | MS.gene072782:intron | 50.0% | |
| AGGTGTGATGCACTTGGAGA+TGG | - | chr5.3:3934843-3934862 | MS.gene072782:intron | 50.0% | |
| ATGCCATGAGGGTTCGAGAA+TGG | - | chr5.3:3933793-3933812 | MS.gene072782:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.3:3934174-3934193 | None:intergenic | 50.0% | |
| CGATTTGCGGGTTCTGCTAA+AGG | - | chr5.3:3935020-3935039 | MS.gene072782:intron | 50.0% | |
| CGTCGAGTAAACCAATAGCC+TGG | + | chr5.3:3933749-3933768 | None:intergenic | 50.0% | |
| CTCAGCTCCAAGAATCTGCA+CGG | + | chr5.3:3934679-3934698 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.3:3934177-3934196 | MS.gene072782:CDS | 50.0% | |
| GAGCTGAGAAGGCTCTCTTT+AGG | - | chr5.3:3934691-3934710 | MS.gene072782:intron | 50.0% | |
| GATAGAAAGAAGGGAGCTGG+AGG | - | chr5.3:3935071-3935090 | MS.gene072782:intron | 50.0% | |
| GCAGATTCTTGGAGCTGAGA+AGG | - | chr5.3:3934680-3934699 | MS.gene072782:intron | 50.0% | |
| GCTATCAGGTGTGATGCACT+TGG | - | chr5.3:3934837-3934856 | MS.gene072782:intron | 50.0% | |
| GCTGTTATGGAGCTAATGCG+AGG | - | chr5.3:3933434-3933453 | MS.gene072782:intron | 50.0% | |
| GGCATATCAGCAGCATCTTC+AGG | + | chr5.3:3935621-3935640 | None:intergenic | 50.0% | |
| GGTAGTACCGTGCAGATTCT+TGG | - | chr5.3:3934669-3934688 | MS.gene072782:intron | 50.0% | |
| TGAGACAAACCCAGGCTCAT+CGG | + | chr5.3:3933515-3933534 | None:intergenic | 50.0% | |
| TGCTTCCTTAACCAGTTCCC+GGG | + | chr5.3:3932416-3932435 | None:intergenic | 50.0% | |
| ! | CACATGTGTCACTCTGGTGT+TGG | - | chr5.3:3932748-3932767 | MS.gene072782:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.3:3934171-3934190 | MS.gene072782:CDS | 50.0% |
| ! | GAAAGAGTACGGGCTTTGTG+TGG | + | chr5.3:3934052-3934071 | None:intergenic | 50.0% |
| ! | GCTTGCTGCAAAGACAGCAT+TGG | - | chr5.3:3934815-3934834 | MS.gene072782:intron | 50.0% |
| ! | GTACTGTTTGAAACCCCTGC+GGG | - | chr5.3:3932065-3932084 | MS.gene072782:CDS | 50.0% |
| !! | CAACTTCATGTTCTGGCTCC+TGG | + | chr5.3:3935482-3935501 | None:intergenic | 50.0% |
| !! | CGCAAGGTCTGTCAAGTTGA+TGG | - | chr5.3:3933869-3933888 | MS.gene072782:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.3:3934185-3934204 | MS.gene072782:CDS | 55.0% | |
| AGCAGCATCTTCAGGCTCTG+AGG | + | chr5.3:3935613-3935632 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.3:3934186-3934205 | None:intergenic | 55.0% | |
| CAATGACACATGTCGGACGC+TGG | - | chr5.3:3932778-3932797 | MS.gene072782:intron | 55.0% | |
| CAGTGCGGATGCTGCAAGAA+AGG | - | chr5.3:3932956-3932975 | MS.gene072782:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.3:3934179-3934198 | None:intergenic | 55.0% | |
| CTTTCTTGCAGCATCCGCAC+TGG | + | chr5.3:3932958-3932977 | None:intergenic | 55.0% | |
| GAGCCATGTCTTGAACAGCG+AGG | + | chr5.3:3933493-3933512 | None:intergenic | 55.0% | |
| GCGCGATTGAGGAATCTCGA+AGG | - | chr5.3:3934984-3935003 | MS.gene072782:intron | 55.0% | |
| GCTATGGTTGGGGAGCTTGT+TGG | - | chr5.3:3934594-3934613 | MS.gene072782:intron | 55.0% | |
| GGCTCTGTTCTCCAATCCCA+TGG | + | chr5.3:3934880-3934899 | None:intergenic | 55.0% | |
| GGGATTGGAGAACAGAGCCA+AGG | - | chr5.3:3934881-3934900 | MS.gene072782:intron | 55.0% | |
| GGGTTCGAGAATGGTATGGC+TGG | - | chr5.3:3933802-3933821 | MS.gene072782:intron | 55.0% | |
| GGTTGACACCATGATCGTCC+AGG | - | chr5.3:3933728-3933747 | MS.gene072782:intron | 55.0% | |
| TGAAAAGGGCGAAACCCGCA+GGG | + | chr5.3:3932082-3932101 | None:intergenic | 55.0% | |
| TGCAGCTTGAAGCGCGATTG+AGG | - | chr5.3:3934973-3934992 | MS.gene072782:intron | 55.0% | |
| TGGCCTCGCTGTTCAAGACA+TGG | - | chr5.3:3933487-3933506 | MS.gene072782:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.3:3934185-3934204 | None:intergenic | 55.0% | |
| TTGAAAAGGGCGAAACCCGC+AGG | + | chr5.3:3932083-3932102 | None:intergenic | 55.0% | |
| ! | GGACGATCATGGTGTCAACC+TGG | + | chr5.3:3933728-3933747 | None:intergenic | 55.0% |
| AGACATGGCTCCGATGAGCC+TGG | - | chr5.3:3933502-3933521 | MS.gene072782:intron | 60.0% | |
| AGCTACCCCCATGGGCAATG+AGG | + | chr5.3:3934626-3934645 | None:intergenic | 60.0% | |
| GAAAAGGGCGAAACCCGCAG+GGG | + | chr5.3:3932081-3932100 | None:intergenic | 60.0% | |
| GACATGGCTCCGATGAGCCT+GGG | - | chr5.3:3933503-3933522 | MS.gene072782:intron | 60.0% | |
| GTGCTCGCCTCATTGCCCAT+GGG | - | chr5.3:3934616-3934635 | MS.gene072782:intron | 60.0% | |
| TGCTCGCCTCATTGCCCATG+GGG | - | chr5.3:3934617-3934636 | MS.gene072782:intron | 60.0% | |
| GCTCGCCTCATTGCCCATGG+GGG | - | chr5.3:3934618-3934637 | MS.gene072782:intron | 65.0% | |
| GGTGCTCGCCTCATTGCCCA+TGG | - | chr5.3:3934615-3934634 | MS.gene072782:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3932059 | 3935683 | 3932059 | ID=MS.gene072782 |
| chr5.3 | mRNA | 3932059 | 3935683 | 3932059 | ID=MS.gene072782.t1;Parent=MS.gene072782 |
| chr5.3 | exon | 3935606 | 3935683 | 3935606 | ID=MS.gene072782.t1.exon1;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3935606 | 3935683 | 3935606 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3934765 | 3934806 | 3934765 | ID=MS.gene072782.t1.exon2;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3934765 | 3934806 | 3934765 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3934419 | 3934598 | 3934419 | ID=MS.gene072782.t1.exon3;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3934419 | 3934598 | 3934419 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3934168 | 3934332 | 3934168 | ID=MS.gene072782.t1.exon4;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3934168 | 3934332 | 3934168 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3933813 | 3934013 | 3933813 | ID=MS.gene072782.t1.exon5;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3933813 | 3934013 | 3933813 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3932840 | 3933337 | 3932840 | ID=MS.gene072782.t1.exon6;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3932840 | 3933337 | 3932840 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3932630 | 3932764 | 3932630 | ID=MS.gene072782.t1.exon7;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3932630 | 3932764 | 3932630 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| chr5.3 | exon | 3932059 | 3932553 | 3932059 | ID=MS.gene072782.t1.exon8;Parent=MS.gene072782.t1 |
| chr5.3 | CDS | 3932059 | 3932553 | 3932059 | ID=cds.MS.gene072782.t1;Parent=MS.gene072782.t1 |
| Gene Sequence |
| Protein sequence |
