Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50744.t1 | XP_024637950.1 | 98.7 | 456 | 6 | 0 | 1 | 456 | 1 | 456 | 1.10E-247 | 865.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50744.t1 | O04658 | 81.8 | 444 | 81 | 0 | 1 | 444 | 1 | 444 | 3.6e-207 | 722.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50744.t1 | G7JIJ7 | 98.7 | 456 | 6 | 0 | 1 | 456 | 1 | 456 | 7.9e-248 | 865.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049361 | MS.gene50744 | 0.862186 | 6.05E-64 | -1.69E-46 |
| MS.gene057157 | MS.gene50744 | 0.805634 | 1.21E-49 | -1.69E-46 |
| MS.gene060483 | MS.gene50744 | 0.849477 | 3.15E-60 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50744.t1 | MTR_4g070910 | 98.696 | 460 | 6 | 0 | 1 | 460 | 1 | 460 | 0.0 | 933 |
| MS.gene50744.t1 | MTR_5g010260 | 91.904 | 457 | 37 | 0 | 1 | 457 | 1 | 457 | 0.0 | 867 |
| MS.gene50744.t1 | MTR_4g103790 | 44.608 | 408 | 209 | 6 | 1 | 393 | 3 | 408 | 4.56e-109 | 333 |
| MS.gene50744.t1 | MTR_5g010290 | 71.014 | 138 | 38 | 1 | 26 | 161 | 9 | 146 | 1.06e-59 | 192 |
| MS.gene50744.t1 | MTR_7g037560 | 32.287 | 223 | 150 | 1 | 159 | 380 | 34 | 256 | 1.50e-29 | 120 |
| MS.gene50744.t1 | MTR_7g037560 | 32.287 | 223 | 150 | 1 | 159 | 380 | 95 | 317 | 4.41e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50744.t1 | AT5G27120 | 81.757 | 444 | 81 | 0 | 1 | 444 | 1 | 444 | 0.0 | 758 |
| MS.gene50744.t1 | AT3G05060 | 81.038 | 443 | 84 | 0 | 1 | 443 | 2 | 444 | 0.0 | 753 |
| MS.gene50744.t1 | AT5G27140 | 62.676 | 426 | 123 | 3 | 1 | 425 | 1 | 391 | 0.0 | 514 |
| MS.gene50744.t1 | AT5G27140 | 62.441 | 426 | 122 | 4 | 1 | 425 | 1 | 389 | 3.83e-179 | 509 |
| MS.gene50744.t1 | AT1G56110 | 45.742 | 411 | 200 | 7 | 1 | 393 | 3 | 408 | 8.05e-115 | 348 |
| MS.gene50744.t1 | AT3G12860 | 44.335 | 406 | 213 | 4 | 1 | 393 | 3 | 408 | 7.82e-112 | 339 |
| MS.gene50744.t1 | AT1G60170 | 27.615 | 239 | 170 | 1 | 159 | 397 | 95 | 330 | 1.19e-21 | 97.8 |
Find 112 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAATCCTTATTTATTTAA+TGG | 0.209120 | 4.3:-34269082 | None:intergenic |
| CTTATCCCATTAAATAAATA+AGG | 0.229729 | 4.3:+34269076 | None:intergenic |
| GGCTATCAGGTGTGATGCAC+TGG | 0.262961 | 4.3:-34269924 | MS.gene50744:CDS |
| CAAAGACTGCTTTGGCTATC+AGG | 0.264189 | 4.3:-34269937 | MS.gene50744:CDS |
| CCCAACCATAGCAGTCAAAT+TGG | 0.271023 | 4.3:+34270177 | None:intergenic |
| GAATATTATTAAGGAGAAAT+TGG | 0.271601 | 4.3:-34272019 | MS.gene50744:intron |
| AAAGCTTGGGAATATTATTA+AGG | 0.301937 | 4.3:-34272028 | MS.gene50744:CDS |
| TTGTCATATGCTTCGATCTT+GGG | 0.331868 | 4.3:+34269715 | None:intergenic |
| GGTAGTACCGTGCAGATTCT+TGG | 0.334079 | 4.3:-34270091 | MS.gene50744:CDS |
| CTTGTCATATGCTTCGATCT+TGG | 0.340268 | 4.3:+34269714 | None:intergenic |
| ACTTGACAGACCTTGCATAT+TGG | 0.347594 | 4.3:+34270614 | None:intergenic |
| GATGTTGTCAACTATGATTT+TGG | 0.347858 | 4.3:+34270636 | None:intergenic |
| GCTAAACTTCAGCTTGTATC+TGG | 0.349651 | 4.3:+34271779 | None:intergenic |
| CGCTTTGCCGGTTCTGCTAA+AGG | 0.358145 | 4.3:-34269742 | MS.gene50744:CDS |
| ACTATGATCGTTCAGGCTAT+TGG | 0.363794 | 4.3:-34270742 | MS.gene50744:CDS |
| ATATCAATGGGAACTGAAAT+TGG | 0.371359 | 4.3:-34270310 | MS.gene50744:CDS |
| GGCCTAGTTCTTTGCCTTCA+AGG | 0.381274 | 4.3:+34269764 | None:intergenic |
| ATTTACCATGCATCCTTGAT+TGG | 0.385846 | 4.3:-34270007 | MS.gene50744:CDS |
| GTCAGAGGAGGTTGAGGCAG+AGG | 0.395543 | 4.3:-34270350 | MS.gene50744:CDS |
| CCATGCATCCTTGATTGGTC+AGG | 0.410857 | 4.3:-34270002 | MS.gene50744:CDS |
| GCAGCTACTTTGCTAATTGA+TGG | 0.411124 | 4.3:-34272123 | MS.gene50744:CDS |
| TGTTCATAACAATGCTGTTA+TGG | 0.413565 | 4.3:-34271901 | MS.gene50744:CDS |
| AAAGAACTAGGCCGCTTTGC+CGG | 0.414173 | 4.3:-34269754 | MS.gene50744:CDS |
| CCAATTTGACTGCTATGGTT+GGG | 0.414603 | 4.3:-34270177 | MS.gene50744:CDS |
| GCTATGGTTGGGGAGCTTGT+TGG | 0.416805 | 4.3:-34270166 | MS.gene50744:CDS |
| TGAGACAAACCCAAGCTCAT+AGG | 0.424290 | 4.3:+34271810 | None:intergenic |
| TTGTCAGTAACAGGAGGCTC+TGG | 0.426836 | 4.3:+34269506 | None:intergenic |
| TATTAGAGAGCTCTGTGATC+AGG | 0.429227 | 4.3:-34270269 | MS.gene50744:CDS |
| GGGCTTCCCTTTAGCAGAAC+CGG | 0.437955 | 4.3:+34269735 | None:intergenic |
| AAGCATGCTACTCCAAAGTA+TGG | 0.441688 | 4.3:-34270034 | MS.gene50744:CDS |
| CTTTGGTTCAATAACTGAAT+CGG | 0.444467 | 4.3:+34269556 | None:intergenic |
| AGCTAATAATATACCTTAGC+TGG | 0.444788 | 4.3:+34269658 | None:intergenic |
| CACTGCAGATGCTGCTAGAA+AGG | 0.446366 | 4.3:-34272365 | MS.gene50744:intron |
| TCCATTGCAGAATTAGACTT+TGG | 0.447306 | 4.3:+34269539 | None:intergenic |
| TGCAGCTTGAAGCACGTTTG+AGG | 0.448590 | 4.3:-34269789 | MS.gene50744:intron |
| GGTGGATACTATGATCGTTC+AGG | 0.449376 | 4.3:-34270749 | MS.gene50744:CDS |
| GACATGGCCCCTATGAGCTT+GGG | 0.453354 | 4.3:-34271819 | MS.gene50744:CDS |
| ACTTGCTGCAAAGACTGCTT+TGG | 0.456044 | 4.3:-34269945 | MS.gene50744:CDS |
| AGACATGGCCCCTATGAGCT+TGG | 0.460296 | 4.3:-34271820 | MS.gene50744:CDS |
| GCAAGATAACACCATGGGAT+TGG | 0.463401 | 4.3:-34269894 | MS.gene50744:CDS |
| GCTTTGCCGGTTCTGCTAAA+GGG | 0.467457 | 4.3:-34269741 | MS.gene50744:CDS |
| GAGACAAACCCAAGCTCATA+GGG | 0.467946 | 4.3:+34271811 | None:intergenic |
| AGTTCAAGGGGAAAATTTCT+CGG | 0.473372 | 4.3:-34269970 | MS.gene50744:CDS |
| TATGACAAGGATAGAAAGAA+AGG | 0.477667 | 4.3:-34269700 | MS.gene50744:CDS |
| AGCTGGAGTTATCAGTCCTC+CGG | 0.492874 | 4.3:+34269675 | None:intergenic |
| GGAGGTTGAGGCAGAGGTGA+AGG | 0.493001 | 4.3:-34270344 | MS.gene50744:CDS |
| CCAACCATAGCAGTCAAATT+GGG | 0.494028 | 4.3:+34270178 | None:intergenic |
| CAATTTGACTGCTATGGTTG+GGG | 0.494927 | 4.3:-34270176 | MS.gene50744:CDS |
| GGTGTTGCTGAGTCAAAGCT+TGG | 0.496488 | 4.3:-34272042 | MS.gene50744:CDS |
| TGCAAGGTCTGTCAAGTTGA+TGG | 0.498706 | 4.3:-34270608 | MS.gene50744:CDS |
| CCCAATTTGACTGCTATGGT+TGG | 0.502179 | 4.3:-34270178 | MS.gene50744:CDS |
| ATTTATTAAGCTTCCTCCAT+GGG | 0.503415 | 4.3:+34270129 | None:intergenic |
| AGTAGCTGCCTCTAGAGCTT+CGG | 0.504643 | 4.3:+34272137 | None:intergenic |
| TGCACCCAATTTGACTGCTA+TGG | 0.506074 | 4.3:-34270182 | MS.gene50744:CDS |
| TGGAGCGGCCTGACCAATCA+AGG | 0.509639 | 4.3:+34269994 | None:intergenic |
| GAAGCTTCAGTGATATCAAT+GGG | 0.510808 | 4.3:-34270322 | MS.gene50744:CDS |
| CACTTTGAAAATAGCAAACC+CGG | 0.515199 | 4.3:+34272857 | None:intergenic |
| TACTGTTTGAAACACCGGCC+GGG | 0.515816 | 4.3:-34272875 | MS.gene50744:CDS |
| CATTGTGAAAATGAAACGTT+AGG | 0.525745 | 4.3:-34272063 | MS.gene50744:CDS |
| GGAAGCTTCAGTGATATCAA+TGG | 0.526035 | 4.3:-34270323 | MS.gene50744:CDS |
| AATTGATGGCAAAGCTAGCA+AGG | 0.527868 | 4.3:-34272109 | MS.gene50744:CDS |
| GATTTATTAAGCTTCCTCCA+TGG | 0.528986 | 4.3:+34270128 | None:intergenic |
| AGCAGTCAAATTGGGTGCAA+TGG | 0.533807 | 4.3:+34270186 | None:intergenic |
| ATGCCATGAGGGTTCGTGAA+TGG | 0.538629 | 4.3:-34270684 | MS.gene50744:CDS |
| GCACGTTTGAGGAACCTTGA+AGG | 0.539843 | 4.3:-34269778 | MS.gene50744:CDS |
| ATAAATCTTGCAAAGCAGCC+TGG | 0.545223 | 4.3:-34270112 | MS.gene50744:CDS |
| AACCTTGAAGGCAAAGAACT+AGG | 0.547172 | 4.3:-34269766 | MS.gene50744:CDS |
| GGTGTGATGCACTGGGTGAC+GGG | 0.547776 | 4.3:-34269916 | MS.gene50744:CDS |
| GCTTCTACTGTTTGAAACAC+CGG | 0.548474 | 4.3:-34272880 | MS.gene50744:CDS |
| TCAGGCCGCTCCAAAGTTCA+AGG | 0.553933 | 4.3:-34269984 | MS.gene50744:CDS |
| AGGAAAGCTTTCTAAAGTTG+AGG | 0.554316 | 4.3:-34272826 | MS.gene50744:intron |
| AGGTGTGATGCACTGGGTGA+CGG | 0.555737 | 4.3:-34269917 | MS.gene50744:CDS |
| GTGTTGCTGAGTCAAAGCTT+GGG | 0.558313 | 4.3:-34272041 | MS.gene50744:CDS |
| AAGGATAGAAAGAAAGGAGC+CGG | 0.559519 | 4.3:-34269694 | MS.gene50744:CDS |
| CTACTGTTTGAAACACCGGC+CGG | 0.563221 | 4.3:-34272876 | MS.gene50744:CDS |
| AGAATCTGCACGGTACTACC+AGG | 0.563552 | 4.3:+34270094 | None:intergenic |
| TCTATGATTATCTCAAGAGT+AGG | 0.573998 | 4.3:-34270216 | MS.gene50744:CDS |
| GGTGCTCGCCTCATTGCCCA+TGG | 0.577178 | 4.3:-34270145 | MS.gene50744:CDS |
| CAATTGAATGAACTCATAGC+AGG | 0.584388 | 4.3:-34271855 | MS.gene50744:CDS |
| ACCAAAGTCTAATTCTGCAA+TGG | 0.590650 | 4.3:-34269540 | MS.gene50744:CDS |
| GCTATCAGGTGTGATGCACT+GGG | 0.592574 | 4.3:-34269923 | MS.gene50744:CDS |
| GAATACTTCCGAAGCTCTAG+AGG | 0.594176 | 4.3:-34272145 | MS.gene50744:CDS |
| AGCTTCCTCCATGGGCAATG+AGG | 0.595189 | 4.3:+34270137 | None:intergenic |
| TGGTAAATGAGACCATACTT+TGG | 0.597333 | 4.3:+34270022 | None:intergenic |
| ATGAGGGTTCGTGAATGGTA+TGG | 0.601117 | 4.3:-34270679 | MS.gene50744:CDS |
| CAGGCCGCTCCAAAGTTCAA+GGG | 0.602064 | 4.3:-34269983 | MS.gene50744:CDS |
| ATACCATTCACGAACCCTCA+TGG | 0.603195 | 4.3:+34270681 | None:intergenic |
| GCTGAAGTTTAGCGCTGACA+AGG | 0.610350 | 4.3:-34271769 | MS.gene50744:intron |
| GGGATTGGAAAACAGAGCTA+AGG | 0.614620 | 4.3:-34269879 | MS.gene50744:intron |
| TTGAAAATAGCAAACCCGGC+CGG | 0.617400 | 4.3:+34272861 | None:intergenic |
| GCTGAACACGTATGCCATGA+GGG | 0.618620 | 4.3:-34270695 | MS.gene50744:CDS |
| CCTGACCAATCAAGGATGCA+TGG | 0.619510 | 4.3:+34270002 | None:intergenic |
| AGGACTGATAACTCCAGCTA+AGG | 0.620619 | 4.3:-34269671 | MS.gene50744:intron |
| GCAAGGTCTGTCAAGTTGAT+GGG | 0.626398 | 4.3:-34270607 | MS.gene50744:CDS |
| CTCGGCACCAAGAATCTGCA+CGG | 0.631244 | 4.3:+34270084 | None:intergenic |
| AGGTCTAGCTGTTCAAGACA+TGG | 0.637643 | 4.3:-34271835 | MS.gene50744:CDS |
| GACGGGCAAGATAACACCAT+GGG | 0.638389 | 4.3:-34269899 | MS.gene50744:CDS |
| AGGCCGCTCCAAAGTTCAAG+GGG | 0.639325 | 4.3:-34269982 | MS.gene50744:CDS |
| TTGACAACATCCAATATGCA+AGG | 0.639726 | 4.3:-34270624 | MS.gene50744:CDS |
| TTTCCCCTTGAACTTTGGAG+CGG | 0.639830 | 4.3:+34269979 | None:intergenic |
| CAAGATCGAAGCATATGACA+AGG | 0.641584 | 4.3:-34269713 | MS.gene50744:CDS |
| AGCTGAACACGTATGCCATG+AGG | 0.646581 | 4.3:-34270696 | MS.gene50744:CDS |
| CTTTCTAGCAGCATCTGCAG+TGG | 0.650736 | 4.3:+34272366 | None:intergenic |
| ATTGATGGCAAAGCTAGCAA+GGG | 0.654528 | 4.3:-34272108 | MS.gene50744:CDS |
| GGGTTCGTGAATGGTATGGT+TGG | 0.660131 | 4.3:-34270675 | MS.gene50744:CDS |
| GCTCGCCTCATTGCCCATGG+AGG | 0.662199 | 4.3:-34270142 | MS.gene50744:CDS |
| GATAGAAAGAAAGGAGCCGG+AGG | 0.682277 | 4.3:-34269691 | MS.gene50744:CDS |
| TGCAAAGCTTGATTTCTCTG+AGG | 0.684043 | 4.3:-34270569 | MS.gene50744:intron |
| AGACAAACCCAAGCTCATAG+GGG | 0.697188 | 4.3:+34271812 | None:intergenic |
| CTTTAGCAGAACCGGCAAAG+CGG | 0.708275 | 4.3:+34269743 | None:intergenic |
| TGACGGGCAAGATAACACCA+TGG | 0.727962 | 4.3:-34269900 | MS.gene50744:CDS |
| GCTGTTATGGAGTTGATGAG+AGG | 0.738756 | 4.3:-34271888 | MS.gene50744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACTAAATAATCAAATTT+AGG | - | chr4.3:34269768-34269787 | MS.gene50744:CDS | 15.0% |
| !!! | TCAAATAGCTAATTTTTTAT+CGG | - | chr4.3:34270021-34270040 | MS.gene50744:CDS | 15.0% |
| !!! | TTTTCAAATTCAAAATGTAT+AGG | - | chr4.3:34269446-34269465 | MS.gene50744:intron | 15.0% |
| !! | AAAGAAAGAAAAGAAGAAAA+AGG | - | chr4.3:34272502-34272521 | MS.gene50744:intron | 20.0% |
| !! | ACAACAAAATTGGAAATTTA+AGG | + | chr4.3:34271082-34271101 | None:intergenic | 20.0% |
| !! | ACTAAATAATCAAATTTAGG+TGG | - | chr4.3:34269771-34269790 | MS.gene50744:CDS | 20.0% |
| !! | CTTGAAATGAAAAGAAAAAA+TGG | + | chr4.3:34269421-34269440 | None:intergenic | 20.0% |
| !! | GAATATTATTAAGGAGAAAT+TGG | - | chr4.3:34269948-34269967 | MS.gene50744:CDS | 20.0% |
| !! | GTTAAACAAAGAGTAAATAT+TGG | + | chr4.3:34271482-34271501 | None:intergenic | 20.0% |
| !! | TATGCAATGAGTAAATTAAT+TGG | + | chr4.3:34271452-34271471 | None:intergenic | 20.0% |
| !! | TGGTAAAATATAAATTGGTT+AGG | + | chr4.3:34269548-34269567 | None:intergenic | 20.0% |
| !! | TGTAAGTTAACTAAAAATCA+AGG | - | chr4.3:34270479-34270498 | MS.gene50744:intron | 20.0% |
| !! | TTAACTAAAAATCAACTGTT+CGG | - | chr4.3:34270485-34270504 | MS.gene50744:intron | 20.0% |
| !!! | ACTTTATGATGCTTTTTATT+AGG | - | chr4.3:34271197-34271216 | MS.gene50744:intron | 20.0% |
| !!! | ATCATAAAGACAGTTTTATT+CGG | - | chr4.3:34270875-34270894 | MS.gene50744:intron | 20.0% |
| !!! | ATTTTGTTTAAGAGTAACTT+AGG | + | chr4.3:34269981-34270000 | None:intergenic | 20.0% |
| !!! | GAAGTTGGTAAAATATAAAT+TGG | + | chr4.3:34269553-34269572 | None:intergenic | 20.0% |
| !!! | GATTTTATCATTTTTTAACC+TGG | - | chr4.3:34270743-34270762 | MS.gene50744:CDS | 20.0% |
| !!! | GGTGTTATTTAATTTTCTAT+TGG | - | chr4.3:34272338-34272357 | MS.gene50744:intron | 20.0% |
| !!! | TTTTTATCTTTCTTTTTGCT+CGG | + | chr4.3:34272722-34272741 | None:intergenic | 20.0% |
| ! | AAAGAAGAAAAAGGAGAAAA+AGG | - | chr4.3:34272511-34272530 | MS.gene50744:intron | 25.0% |
| ! | AAAGCTTGGGAATATTATTA+AGG | - | chr4.3:34269939-34269958 | MS.gene50744:CDS | 25.0% |
| ! | AAGACAAAGTATAAATACAG+TGG | + | chr4.3:34269522-34269541 | None:intergenic | 25.0% |
| ! | AAGTTAACTAAAAATCAAGG+TGG | - | chr4.3:34270535-34270554 | MS.gene50744:intron | 25.0% |
| ! | AGAAAAGAAGAAGAAAAAGA+AGG | - | chr4.3:34272586-34272605 | MS.gene50744:intron | 25.0% |
| ! | CAAACAAATCACAACAAAAT+TGG | + | chr4.3:34271092-34271111 | None:intergenic | 25.0% |
| ! | CTCTCTAAATATATATATCC+AGG | + | chr4.3:34270764-34270783 | None:intergenic | 25.0% |
| ! | CTGTATTTATACTTTGTCTT+CGG | - | chr4.3:34269522-34269541 | MS.gene50744:CDS | 25.0% |
| ! | GATACACATAATTAAAGAGT+TGG | + | chr4.3:34270858-34270877 | None:intergenic | 25.0% |
| ! | TAAATCCTGTATAAAGAAGT+TGG | + | chr4.3:34269568-34269587 | None:intergenic | 25.0% |
| ! | TAACGTGAGAAAAATTAAAG+TGG | + | chr4.3:34270314-34270333 | None:intergenic | 25.0% |
| ! | TATGTATCAGCTAATCAATA+TGG | - | chr4.3:34272770-34272789 | MS.gene50744:intron | 25.0% |
| ! | TCATGCAATCTTAAGAATAA+AGG | + | chr4.3:34270427-34270446 | None:intergenic | 25.0% |
| ! | TGACAAAAAGAAAGAAAAGA+AGG | - | chr4.3:34272478-34272497 | MS.gene50744:intron | 25.0% |
| ! | TGCATTATTTCACTTTGATA+AGG | + | chr4.3:34270676-34270695 | None:intergenic | 25.0% |
| ! | TTCATGTTAATGCAATTTGT+AGG | - | chr4.3:34272859-34272878 | MS.gene50744:CDS | 25.0% |
| ! | TTGAAAACATAGTACAACAA+CGG | + | chr4.3:34270272-34270291 | None:intergenic | 25.0% |
| !! | CAAAATCTGAAATTCATTTC+AGG | + | chr4.3:34271598-34271617 | None:intergenic | 25.0% |
| !! | CTGAATCTTTTAACATTTCT+AGG | - | chr4.3:34271020-34271039 | MS.gene50744:intron | 25.0% |
| !! | GGTATATTATTAGCTTCATT+TGG | - | chr4.3:34272317-34272336 | MS.gene50744:intron | 25.0% |
| !! | TTTTACCAACTTCTTTATAC+AGG | - | chr4.3:34269560-34269579 | MS.gene50744:CDS | 25.0% |
| !!! | ATAAAAAGCATCATAAAGTC+AGG | + | chr4.3:34271196-34271215 | None:intergenic | 25.0% |
| !!! | TAACCATTTTTGTATACTTC+TGG | - | chr4.3:34272800-34272819 | MS.gene50744:intron | 25.0% |
| !!! | TCATAAAGACAGTTTTATTC+GGG | - | chr4.3:34270876-34270895 | MS.gene50744:intron | 25.0% |
| !!! | TTATGATGCTTTTTATTAGG+TGG | - | chr4.3:34271200-34271219 | MS.gene50744:intron | 25.0% |
| !!! | TTTGTTGTGATTTGTTTGTA+TGG | - | chr4.3:34271094-34271113 | MS.gene50744:intron | 25.0% |
| AAAGAAGGAATCTACTGAAA+AGG | - | chr4.3:34272601-34272620 | MS.gene50744:intron | 30.0% | |
| AAAGAAGTTAGGCACAAATA+TGG | - | chr4.3:34270362-34270381 | MS.gene50744:intron | 30.0% | |
| AACATGAAATTGAGAGGATA+AGG | + | chr4.3:34269652-34269671 | None:intergenic | 30.0% | |
| ACATGAAATTGAGAGGATAA+GGG | + | chr4.3:34269651-34269670 | None:intergenic | 30.0% | |
| AGCTAATAATATACCTTAGC+TGG | + | chr4.3:34272312-34272331 | None:intergenic | 30.0% | |
| ATATCAATGGGAACTGAAAT+TGG | - | chr4.3:34271657-34271676 | MS.gene50744:intron | 30.0% | |
| ATTTATTAAGCTTCCTCCAT+GGG | + | chr4.3:34271841-34271860 | None:intergenic | 30.0% | |
| CAAGTCTTAAGCTACTATTT+CGG | + | chr4.3:34270975-34270994 | None:intergenic | 30.0% | |
| CATTGTGAAAATGAAACGTT+AGG | - | chr4.3:34269904-34269923 | MS.gene50744:CDS | 30.0% | |
| TACATATATTTCGCTCTAGT+CGG | + | chr4.3:34272756-34272775 | None:intergenic | 30.0% | |
| TATGACAAGGATAGAAAGAA+AGG | - | chr4.3:34272267-34272286 | MS.gene50744:intron | 30.0% | |
| TCTATGATTATCTCAAGAGT+AGG | - | chr4.3:34271751-34271770 | MS.gene50744:intron | 30.0% | |
| TGTTCATAACAATGCTGTTA+TGG | - | chr4.3:34270066-34270085 | MS.gene50744:CDS | 30.0% | |
| TTCTCTCAGCAATATGATAA+TGG | - | chr4.3:34269675-34269694 | MS.gene50744:CDS | 30.0% | |
| TTTCTAGGCAAATATGCATA+TGG | - | chr4.3:34271035-34271054 | MS.gene50744:intron | 30.0% | |
| ! | CTTTGGTTCAATAACTGAAT+CGG | + | chr4.3:34272414-34272433 | None:intergenic | 30.0% |
| ! | GATGTTGTCAACTATGATTT+TGG | + | chr4.3:34271334-34271353 | None:intergenic | 30.0% |
| ! | TATATTTTTCACCGAACAGT+TGG | - | chr4.3:34270593-34270612 | MS.gene50744:CDS | 30.0% |
| ! | TCTTTCTTTTTGTCAGTAAC+AGG | + | chr4.3:34272473-34272492 | None:intergenic | 30.0% |
| ! | TGAATTTCAGATTTTGTCAG+AGG | - | chr4.3:34271602-34271621 | MS.gene50744:intron | 30.0% |
| !! | ACTATGATTTTGGTAAGTTC+TGG | + | chr4.3:34271324-34271343 | None:intergenic | 30.0% |
| !! | ATTTTCAAAGTGCTTGATGA+AGG | - | chr4.3:34269121-34269140 | MS.gene50744:intron | 30.0% |
| !!! | TCAAAACCTTCTGGTTTTAA+TGG | + | chr4.3:34270651-34270670 | None:intergenic | 30.0% |
| AAAGTGAAATAATGCAGCGA+GGG | - | chr4.3:34270680-34270699 | MS.gene50744:CDS | 35.0% | |
| ACCAAAGTCTAATTCTGCAA+TGG | - | chr4.3:34272427-34272446 | MS.gene50744:intron | 35.0% | |
| AGTTCAAGGGGAAAATTTCT+CGG | - | chr4.3:34271997-34272016 | MS.gene50744:intron | 35.0% | |
| ATGACTAGCAAAGCAGAATA+TGG | + | chr4.3:34270341-34270360 | None:intergenic | 35.0% | |
| ATGTATAGGAGTTCTCAATC+CGG | - | chr4.3:34269460-34269479 | MS.gene50744:intron | 35.0% | |
| ATTTACCATGCATCCTTGAT+TGG | - | chr4.3:34271960-34271979 | MS.gene50744:intron | 35.0% | |
| ATTTCGGTTACCATTTACTC+TGG | + | chr4.3:34270959-34270978 | None:intergenic | 35.0% | |
| CAATTGAATGAACTCATAGC+AGG | - | chr4.3:34270112-34270131 | MS.gene50744:CDS | 35.0% | |
| CACCATTAGAACGTTAGTTA+AGG | + | chr4.3:34270903-34270922 | None:intergenic | 35.0% | |
| CACTGTGTTTAATACCACTA+AGG | - | chr4.3:34269357-34269376 | MS.gene50744:intron | 35.0% | |
| CTTAACTAACGTTCTAATGG+TGG | - | chr4.3:34270901-34270920 | MS.gene50744:intron | 35.0% | |
| CTTAGTGGTATTAAACACAG+TGG | + | chr4.3:34269359-34269378 | None:intergenic | 35.0% | |
| CTTGCAATTCAATGTTCTTG+AGG | - | chr4.3:34270991-34271010 | MS.gene50744:intron | 35.0% | |
| GAAAAAGGAGAAAAAGGAAG+AGG | - | chr4.3:34272517-34272536 | MS.gene50744:intron | 35.0% | |
| GAAGCAAACATGAAATTGAG+AGG | + | chr4.3:34269658-34269677 | None:intergenic | 35.0% | |
| GAAGCTTCAGTGATATCAAT+GGG | - | chr4.3:34271645-34271664 | MS.gene50744:intron | 35.0% | |
| GACCTTAACTAACGTTCTAA+TGG | - | chr4.3:34270898-34270917 | MS.gene50744:intron | 35.0% | |
| GAGGAGAAAAGAAGAAAAAG+AGG | - | chr4.3:34272657-34272676 | MS.gene50744:intron | 35.0% | |
| GATTTATTAAGCTTCCTCCA+TGG | + | chr4.3:34271842-34271861 | None:intergenic | 35.0% | |
| GTGGCTTCAATATATTGATC+AGG | + | chr4.3:34270295-34270314 | None:intergenic | 35.0% | |
| TCCATTGCAGAATTAGACTT+TGG | + | chr4.3:34272431-34272450 | None:intergenic | 35.0% | |
| TGAGTAAATTAATTGGCAGC+AGG | + | chr4.3:34271445-34271464 | None:intergenic | 35.0% | |
| TGCTAGTCATCAAAGAAGTT+AGG | - | chr4.3:34270351-34270370 | MS.gene50744:CDS | 35.0% | |
| TGGTAAATGAGACCATACTT+TGG | + | chr4.3:34271948-34271967 | None:intergenic | 35.0% | |
| TTCTAATGTGCCAGAGTAAA+TGG | - | chr4.3:34270946-34270965 | MS.gene50744:intron | 35.0% | |
| TTCTTAACAACTTCCTCTTC+TGG | + | chr4.3:34272566-34272585 | None:intergenic | 35.0% | |
| TTGACAACATCCAATATGCA+AGG | - | chr4.3:34271343-34271362 | MS.gene50744:intron | 35.0% | |
| TTGTCATATGCTTCGATCTT+GGG | + | chr4.3:34272255-34272274 | None:intergenic | 35.0% | |
| ! | ATTTCAGATTTTGTCAGAGG+AGG | - | chr4.3:34271605-34271624 | MS.gene50744:intron | 35.0% |
| ! | CACTTTGAAAATAGCAAACC+CGG | + | chr4.3:34269113-34269132 | None:intergenic | 35.0% |
| ! | GAAATTTTCCCCTTGAACTT+TGG | + | chr4.3:34271996-34272015 | None:intergenic | 35.0% |
| ! | GCTCCAGAAGTATACAAAAA+TGG | + | chr4.3:34272806-34272825 | None:intergenic | 35.0% |
| ! | TTATCTTTCTTTTTGCTCGG+CGG | + | chr4.3:34272719-34272738 | None:intergenic | 35.0% |
| ! | TTCTTTTTGTCAGTAACAGG+AGG | + | chr4.3:34272470-34272489 | None:intergenic | 35.0% |
| !! | AGGAAAGCTTTCTAAAGTTG+AGG | - | chr4.3:34269141-34269160 | MS.gene50744:intron | 35.0% |
| !! | GTTGTGATTTGTTTGTATGG+TGG | - | chr4.3:34271097-34271116 | MS.gene50744:intron | 35.0% |
| !! | TGCTCTAAAAAGAGCTTTCT+CGG | + | chr4.3:34271904-34271923 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTCTTCAGCTAGC+TGG | - | chr4.3:34271146-34271165 | MS.gene50744:intron | 35.0% |
| AAAGGAGAAAAAGGAAGAGG+TGG | - | chr4.3:34272520-34272539 | MS.gene50744:intron | 40.0% | |
| AAATTGAGAGGATAAGGGTG+TGG | + | chr4.3:34269646-34269665 | None:intergenic | 40.0% | |
| AACCTTGAAGGCAAAGAACT+AGG | - | chr4.3:34272201-34272220 | MS.gene50744:intron | 40.0% | |
| AAGCATGCTACTCCAAAGTA+TGG | - | chr4.3:34271933-34271952 | MS.gene50744:intron | 40.0% | |
| AAGGATAGAAAGAAAGGAGC+CGG | - | chr4.3:34272273-34272292 | MS.gene50744:intron | 40.0% | |
| AATGGAGACCATACTTCGAA+TGG | - | chr4.3:34272635-34272654 | MS.gene50744:intron | 40.0% | |
| ACTATGATCGTTCAGGCTAT+TGG | - | chr4.3:34271225-34271244 | MS.gene50744:intron | 40.0% | |
| ACTTGACAGACCTTGCATAT+TGG | + | chr4.3:34271356-34271375 | None:intergenic | 40.0% | |
| AGGAGACCATTAAAACCAGA+AGG | - | chr4.3:34270642-34270661 | MS.gene50744:CDS | 40.0% | |
| AGTCTTCTTTGTATCACAGC+TGG | + | chr4.3:34270815-34270834 | None:intergenic | 40.0% | |
| ATAAATCTTGCAAAGCAGCC+TGG | - | chr4.3:34271855-34271874 | MS.gene50744:CDS | 40.0% | |
| CAAAGTGAAATAATGCAGCG+AGG | - | chr4.3:34270679-34270698 | MS.gene50744:CDS | 40.0% | |
| CAAGATCGAAGCATATGACA+AGG | - | chr4.3:34272254-34272273 | MS.gene50744:intron | 40.0% | |
| CAATTTGACTGCTATGGTTG+GGG | - | chr4.3:34271791-34271810 | MS.gene50744:CDS | 40.0% | |
| CAGCTAATCAATATGGTGAC+TGG | - | chr4.3:34272777-34272796 | MS.gene50744:intron | 40.0% | |
| CCAACCATAGCAGTCAAATT+GGG | + | chr4.3:34271792-34271811 | None:intergenic | 40.0% | |
| CCAATTTGACTGCTATGGTT+GGG | - | chr4.3:34271790-34271809 | MS.gene50744:CDS | 40.0% | |
| CTAACGTTCTAATGGTGGTA+AGG | - | chr4.3:34270906-34270925 | MS.gene50744:intron | 40.0% | |
| CTTGTCATATGCTTCGATCT+TGG | + | chr4.3:34272256-34272275 | None:intergenic | 40.0% | |
| GAAGAAAAAGAGGAAGAAGC+AGG | - | chr4.3:34272667-34272686 | MS.gene50744:intron | 40.0% | |
| GACTATATCCCTGTAGTGTT+AGG | - | chr4.3:34270831-34270850 | MS.gene50744:intron | 40.0% | |
| GCTAAACTTCAGCTTGTATC+TGG | + | chr4.3:34270191-34270210 | None:intergenic | 40.0% | |
| GGAAGCTTCAGTGATATCAA+TGG | - | chr4.3:34271644-34271663 | MS.gene50744:intron | 40.0% | |
| TAAAAATCAAGGTGGAGCTC+TGG | - | chr4.3:34270543-34270562 | MS.gene50744:intron | 40.0% | |
| TAGATTCTGCACTTCCTTAG+TGG | + | chr4.3:34269374-34269393 | None:intergenic | 40.0% | |
| TATTAGAGAGCTCTGTGATC+AGG | - | chr4.3:34271698-34271717 | MS.gene50744:intron | 40.0% | |
| TGCAAAGCTTGATTTCTCTG+AGG | - | chr4.3:34271398-34271417 | MS.gene50744:intron | 40.0% | |
| TTTCTCCTCCATTCGAAGTA+TGG | + | chr4.3:34272646-34272665 | None:intergenic | 40.0% | |
| ! | AATTGAGAGGATAAGGGTGT+GGG | + | chr4.3:34269645-34269664 | None:intergenic | 40.0% |
| ! | AATTGATGGCAAAGCTAGCA+AGG | - | chr4.3:34269858-34269877 | MS.gene50744:intron | 40.0% |
| ! | ATTGATGGCAAAGCTAGCAA+GGG | - | chr4.3:34269859-34269878 | MS.gene50744:intron | 40.0% |
| ! | GATAAGGCATCAAAACCTTC+TGG | + | chr4.3:34270660-34270679 | None:intergenic | 40.0% |
| ! | GCAGCTACTTTGCTAATTGA+TGG | - | chr4.3:34269844-34269863 | MS.gene50744:intron | 40.0% |
| ! | GCTTCTACTGTTTGAAACAC+CGG | - | chr4.3:34269087-34269106 | MS.gene50744:CDS | 40.0% |
| AGACAAACCCAAGCTCATAG+GGG | + | chr4.3:34270158-34270177 | None:intergenic | 45.0% | |
| AGAGTTGGACCTAACACTAC+AGG | + | chr4.3:34270843-34270862 | None:intergenic | 45.0% | |
| AGCAGTCAAATTGGGTGCAA+TGG | + | chr4.3:34271784-34271803 | None:intergenic | 45.0% | |
| AGGACTGATAACTCCAGCTA+AGG | - | chr4.3:34272296-34272315 | MS.gene50744:intron | 45.0% | |
| AGGTCTAGCTGTTCAAGACA+TGG | - | chr4.3:34270132-34270151 | MS.gene50744:CDS | 45.0% | |
| ATACCATTCACGAACCCTCA+TGG | + | chr4.3:34271289-34271308 | None:intergenic | 45.0% | |
| ATGAGGGTTCGTGAATGGTA+TGG | - | chr4.3:34271288-34271307 | MS.gene50744:intron | 45.0% | |
| CAAAGACTGCTTTGGCTATC+AGG | - | chr4.3:34272030-34272049 | MS.gene50744:CDS | 45.0% | |
| CCCAACCATAGCAGTCAAAT+TGG | + | chr4.3:34271793-34271812 | None:intergenic | 45.0% | |
| CCCAATTTGACTGCTATGGT+TGG | - | chr4.3:34271789-34271808 | MS.gene50744:CDS | 45.0% | |
| GAAATAATGCAGCGAGGGAT+AGG | - | chr4.3:34270685-34270704 | MS.gene50744:CDS | 45.0% | |
| GACAGTACATAACGCTTCAC+CGG | + | chr4.3:34269482-34269501 | None:intergenic | 45.0% | |
| GAGACAAACCCAAGCTCATA+GGG | + | chr4.3:34270159-34270178 | None:intergenic | 45.0% | |
| GAGTTGGACCTAACACTACA+GGG | + | chr4.3:34270842-34270861 | None:intergenic | 45.0% | |
| GCAAGATAACACCATGGGAT+TGG | - | chr4.3:34272073-34272092 | MS.gene50744:CDS | 45.0% | |
| GGAATCTACTGAAAAGGCAG+AGG | - | chr4.3:34272607-34272626 | MS.gene50744:intron | 45.0% | |
| GGGATTGGAAAACAGAGCTA+AGG | - | chr4.3:34272088-34272107 | MS.gene50744:CDS | 45.0% | |
| GGTGGATACTATGATCGTTC+AGG | - | chr4.3:34271218-34271237 | MS.gene50744:intron | 45.0% | |
| GGTGGTTGAAGATGTTGTTG+AGG | - | chr4.3:34272538-34272557 | MS.gene50744:intron | 45.0% | |
| TGAGACAAACCCAAGCTCAT+AGG | + | chr4.3:34270160-34270179 | None:intergenic | 45.0% | |
| TGCACCCAATTTGACTGCTA+TGG | - | chr4.3:34271785-34271804 | MS.gene50744:CDS | 45.0% | |
| TGTTGTTGAGGAACCAGAAG+AGG | - | chr4.3:34272550-34272569 | MS.gene50744:intron | 45.0% | |
| TTGAAAATAGCAAACCCGGC+CGG | + | chr4.3:34269109-34269128 | None:intergenic | 45.0% | |
| TTTCACCGAACAGTTGGTTG+TGG | - | chr4.3:34270599-34270618 | MS.gene50744:CDS | 45.0% | |
| ! | ACTTGCTGCAAAGACTGCTT+TGG | - | chr4.3:34272022-34272041 | MS.gene50744:CDS | 45.0% |
| ! | AGCTCTGTTTTCCAATCCCA+TGG | + | chr4.3:34272087-34272106 | None:intergenic | 45.0% |
| ! | GAATACTTCCGAAGCTCTAG+AGG | - | chr4.3:34269822-34269841 | MS.gene50744:intron | 45.0% |
| ! | GATTTTGTCAGAGGAGGTTG+AGG | - | chr4.3:34271611-34271630 | MS.gene50744:intron | 45.0% |
| ! | GTGTTGCTGAGTCAAAGCTT+GGG | - | chr4.3:34269926-34269945 | MS.gene50744:CDS | 45.0% |
| ! | TTTCCCCTTGAACTTTGGAG+CGG | + | chr4.3:34271991-34272010 | None:intergenic | 45.0% |
| !! | GCAAGGTCTGTCAAGTTGAT+GGG | - | chr4.3:34271360-34271379 | MS.gene50744:intron | 45.0% |
| !! | GCTGTTATGGAGTTGATGAG+AGG | - | chr4.3:34270079-34270098 | MS.gene50744:CDS | 45.0% |
| !! | TGCAAGGTCTGTCAAGTTGA+TGG | - | chr4.3:34271359-34271378 | MS.gene50744:intron | 45.0% |
| AAAGAGGAAGAAGCAGGCAG+AGG | - | chr4.3:34272673-34272692 | MS.gene50744:intron | 50.0% | |
| AGAATCTGCACGGTACTACC+AGG | + | chr4.3:34271876-34271895 | None:intergenic | 50.0% | |
| AGCGAGGGATAGGAGAATAG+AGG | - | chr4.3:34270695-34270714 | MS.gene50744:CDS | 50.0% | |
| AGCTGAACACGTATGCCATG+AGG | - | chr4.3:34271271-34271290 | MS.gene50744:intron | 50.0% | |
| AGCTGGAGTTATCAGTCCTC+CGG | + | chr4.3:34272295-34272314 | None:intergenic | 50.0% | |
| ATGCCATGAGGGTTCGTGAA+TGG | - | chr4.3:34271283-34271302 | MS.gene50744:intron | 50.0% | |
| CACTGCAGATGCTGCTAGAA+AGG | - | chr4.3:34269602-34269621 | MS.gene50744:intron | 50.0% | |
| CCTGACCAATCAAGGATGCA+TGG | + | chr4.3:34271968-34271987 | None:intergenic | 50.0% | |
| CTGGCACATTAGAAAGCAGC+TGG | + | chr4.3:34270940-34270959 | None:intergenic | 50.0% | |
| CTTTAGCAGAACCGGCAAAG+CGG | + | chr4.3:34272227-34272246 | None:intergenic | 50.0% | |
| GACGGGCAAGATAACACCAT+GGG | - | chr4.3:34272068-34272087 | MS.gene50744:CDS | 50.0% | |
| GATAGAAAGAAAGGAGCCGG+AGG | - | chr4.3:34272276-34272295 | MS.gene50744:intron | 50.0% | |
| GCACGTTTGAGGAACCTTGA+AGG | - | chr4.3:34272189-34272208 | MS.gene50744:intron | 50.0% | |
| GCGAGGGATAGGAGAATAGA+GGG | - | chr4.3:34270696-34270715 | MS.gene50744:CDS | 50.0% | |
| GCTATCAGGTGTGATGCACT+GGG | - | chr4.3:34272044-34272063 | MS.gene50744:CDS | 50.0% | |
| GCTGAACACGTATGCCATGA+GGG | - | chr4.3:34271272-34271291 | MS.gene50744:intron | 50.0% | |
| GGAGACCATACTTCGAATGG+AGG | - | chr4.3:34272638-34272657 | MS.gene50744:intron | 50.0% | |
| GGGTTCGTGAATGGTATGGT+TGG | - | chr4.3:34271292-34271311 | MS.gene50744:intron | 50.0% | |
| GGTAGTACCGTGCAGATTCT+TGG | - | chr4.3:34271876-34271895 | MS.gene50744:CDS | 50.0% | |
| TGCAGCTTGAAGCACGTTTG+AGG | - | chr4.3:34272178-34272197 | MS.gene50744:CDS | 50.0% | |
| TTGTCAGTAACAGGAGGCTC+TGG | + | chr4.3:34272464-34272483 | None:intergenic | 50.0% | |
| ! | AAAGAACTAGGCCGCTTTGC+CGG | - | chr4.3:34272213-34272232 | MS.gene50744:intron | 50.0% |
| ! | CCATGCATCCTTGATTGGTC+AGG | - | chr4.3:34271965-34271984 | MS.gene50744:intron | 50.0% |
| ! | CGGTGCAGGAGTATGAGTTT+AGG | - | chr4.3:34270622-34270641 | MS.gene50744:CDS | 50.0% |
| ! | CTACTGTTTGAAACACCGGC+CGG | - | chr4.3:34269091-34269110 | MS.gene50744:intron | 50.0% |
| ! | CTTTCTAGCAGCATCTGCAG+TGG | + | chr4.3:34269604-34269623 | None:intergenic | 50.0% |
| ! | GAAAAGGCAGAGGTGCAGAA+TGG | - | chr4.3:34272617-34272636 | MS.gene50744:intron | 50.0% |
| ! | GGCCTAGTTCTTTGCCTTCA+AGG | + | chr4.3:34272206-34272225 | None:intergenic | 50.0% |
| ! | TACTGTTTGAAACACCGGCC+GGG | - | chr4.3:34269092-34269111 | MS.gene50744:intron | 50.0% |
| ! | TGACGGGCAAGATAACACCA+TGG | - | chr4.3:34272067-34272086 | MS.gene50744:CDS | 50.0% |
| !! | AGTAGCTGCCTCTAGAGCTT+CGG | + | chr4.3:34269833-34269852 | None:intergenic | 50.0% |
| !! | GCTGAAGTTTAGCGCTGACA+AGG | - | chr4.3:34270198-34270217 | MS.gene50744:CDS | 50.0% |
| !! | GCTTTGCCGGTTCTGCTAAA+GGG | - | chr4.3:34272226-34272245 | MS.gene50744:intron | 50.0% |
| !! | GGTGTTGCTGAGTCAAAGCT+TGG | - | chr4.3:34269925-34269944 | MS.gene50744:CDS | 50.0% |
| AGACATGGCCCCTATGAGCT+TGG | - | chr4.3:34270147-34270166 | MS.gene50744:CDS | 55.0% | |
| AGCTTCCTCCATGGGCAATG+AGG | + | chr4.3:34271833-34271852 | None:intergenic | 55.0% | |
| AGGCCGCTCCAAAGTTCAAG+GGG | - | chr4.3:34271985-34272004 | MS.gene50744:intron | 55.0% | |
| AGGTGTGATGCACTGGGTGA+CGG | - | chr4.3:34272050-34272069 | MS.gene50744:CDS | 55.0% | |
| CACCGAACAGTTGGTTGTGG+CGG | - | chr4.3:34270602-34270621 | MS.gene50744:CDS | 55.0% | |
| CACCGCCACAACCAACTGTT+CGG | + | chr4.3:34270607-34270626 | None:intergenic | 55.0% | |
| CAGGCCGCTCCAAAGTTCAA+GGG | - | chr4.3:34271984-34272003 | MS.gene50744:intron | 55.0% | |
| CTCGGCACCAAGAATCTGCA+CGG | + | chr4.3:34271886-34271905 | None:intergenic | 55.0% | |
| GACATGGCCCCTATGAGCTT+GGG | - | chr4.3:34270148-34270167 | MS.gene50744:CDS | 55.0% | |
| GCTATGGTTGGGGAGCTTGT+TGG | - | chr4.3:34271801-34271820 | MS.gene50744:CDS | 55.0% | |
| GGCTATCAGGTGTGATGCAC+TGG | - | chr4.3:34272043-34272062 | MS.gene50744:CDS | 55.0% | |
| GGGCTTCCCTTTAGCAGAAC+CGG | + | chr4.3:34272235-34272254 | None:intergenic | 55.0% | |
| TCAGGCCGCTCCAAAGTTCA+AGG | - | chr4.3:34271983-34272002 | MS.gene50744:intron | 55.0% | |
| !! | CGCTTTGCCGGTTCTGCTAA+AGG | - | chr4.3:34272225-34272244 | MS.gene50744:intron | 55.0% |
| ACAGTTGGTTGTGGCGGTGC+AGG | - | chr4.3:34270608-34270627 | MS.gene50744:CDS | 60.0% | |
| GAGGAAGAAGCAGGCAGAGG+AGG | - | chr4.3:34272676-34272695 | MS.gene50744:intron | 60.0% | |
| GGAGGTTGAGGCAGAGGTGA+AGG | - | chr4.3:34271623-34271642 | MS.gene50744:intron | 60.0% | |
| GGTGTGATGCACTGGGTGAC+GGG | - | chr4.3:34272051-34272070 | MS.gene50744:CDS | 60.0% | |
| GTCAGAGGAGGTTGAGGCAG+AGG | - | chr4.3:34271617-34271636 | MS.gene50744:intron | 60.0% | |
| TGGAGCGGCCTGACCAATCA+AGG | + | chr4.3:34271976-34271995 | None:intergenic | 60.0% | |
| GCTCGCCTCATTGCCCATGG+AGG | - | chr4.3:34271825-34271844 | MS.gene50744:CDS | 65.0% | |
| GGTGCTCGCCTCATTGCCCA+TGG | - | chr4.3:34271822-34271841 | MS.gene50744:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 34269085 | 34272904 | 34269085 | ID=MS.gene50744 |
| chr4.3 | mRNA | 34269085 | 34272904 | 34269085 | ID=MS.gene50744.t1;Parent=MS.gene50744 |
| chr4.3 | exon | 34272827 | 34272904 | 34272827 | ID=MS.gene50744.t1.exon1;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34272827 | 34272904 | 34272827 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34272366 | 34272407 | 34272366 | ID=MS.gene50744.t1.exon2;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34272366 | 34272407 | 34272366 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34272020 | 34272199 | 34272020 | ID=MS.gene50744.t1.exon3;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34272020 | 34272199 | 34272020 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34271770 | 34271934 | 34271770 | ID=MS.gene50744.t1.exon4;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34271770 | 34271934 | 34271770 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34270570 | 34270770 | 34270570 | ID=MS.gene50744.t1.exon5;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34270570 | 34270770 | 34270570 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34269880 | 34270377 | 34269880 | ID=MS.gene50744.t1.exon6;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34269880 | 34270377 | 34269880 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34269672 | 34269806 | 34269672 | ID=MS.gene50744.t1.exon7;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34269672 | 34269806 | 34269672 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34269517 | 34269594 | 34269517 | ID=MS.gene50744.t1.exon8;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34269517 | 34269594 | 34269517 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| chr4.3 | exon | 34269085 | 34269108 | 34269085 | ID=MS.gene50744.t1.exon9;Parent=MS.gene50744.t1 |
| chr4.3 | CDS | 34269085 | 34269108 | 34269085 | ID=cds.MS.gene50744.t1;Parent=MS.gene50744.t1 |
| Gene Sequence |
| Protein sequence |
