AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45937


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45937.t1 MTR_7g066730 96.047 759 8 9 1 750 1 746 0.0 1443
MS.gene45937.t1 MTR_3g462680 31.892 740 296 27 31 747 6 560 2.61e-66 230
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45937.t1 AT3G09070 42.529 783 266 29 30 750 25 685 8.30e-131 404
MS.gene45937.t1 AT2G38070 40.972 720 243 24 33 731 35 593 1.30e-115 362
MS.gene45937.t1 AT5G01170 45.532 470 172 20 28 487 21 416 1.26e-77 261
MS.gene45937.t1 AT5G58930 30.368 517 199 20 252 736 130 517 1.89e-33 135
MS.gene45937.t1 AT3G46990 27.374 716 298 29 45 736 26 543 2.30e-30 127

Find 245 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAGCTGCTTGGAGTATT+TGG 0.106015 7.2:-45149989 MS.gene45937:CDS
TCTGGTTCTGGTATAATTTC+TGG 0.171310 7.2:+45151007 None:intergenic
AAGAAATCGCCGGAAGTTTC+TGG 0.181907 7.2:-45150895 MS.gene45937:CDS
CCAAGCAGCTTTCCATTTAC+TGG 0.185204 7.2:+45149998 None:intergenic
TGAGCTTGAGCTTGAGGTTT+AGG 0.189703 7.2:+45151235 None:intergenic
AACCAATCGGTCGGCAATTC+CGG 0.193474 7.2:-45150754 MS.gene45937:CDS
CCACGAAACGGTAGCGTTTC+GGG 0.208183 7.2:-45150803 MS.gene45937:CDS
CAGTCGGAGATCGCGGATTA+TGG 0.260342 7.2:-45150725 MS.gene45937:CDS
TTGTGGCGGTTGTGGTTGAT+TGG 0.266945 7.2:+45151702 None:intergenic
GAAAGCTGCTTGGAGTATTT+GGG 0.274489 7.2:-45149988 MS.gene45937:CDS
ATGGGTGGAGGCGGAGGAGG+AGG 0.283550 7.2:-45149720 MS.gene45937:CDS
AAGAAGATTCAGACGAAATC+AGG 0.287803 7.2:-45151114 MS.gene45937:CDS
TGTGGCGGTTGTGGTTGATT+GGG 0.289617 7.2:+45151703 None:intergenic
GGAATTGGTGGTGGTGGTAA+TGG 0.298531 7.2:-45149807 MS.gene45937:CDS
CGAAGAAGAGTTCCAGTAAA+TGG 0.302023 7.2:-45150010 MS.gene45937:CDS
GAGGTGGTGGAGGTGTTGTT+TGG 0.306382 7.2:+45151532 None:intergenic
GAGCTTGAGCTTGAGGTTTA+GGG 0.306686 7.2:+45151236 None:intergenic
GGAGGTGGAGGGACGGAAAA+TGG 0.326674 7.2:+45151459 None:intergenic
TCCACGAAACGGTAGCGTTT+CGG 0.333538 7.2:-45150804 MS.gene45937:CDS
CCTTCTCCTCGTCGATGAAT+CGG 0.340273 7.2:+45150397 None:intergenic
GGAGGATGAGGTGGCGGTGT+TGG 0.340712 7.2:+45151417 None:intergenic
GATTTAGTGCGGCGGAGTTC+AGG 0.345251 7.2:+45151388 None:intergenic
TTGAGGAAGTAGGAGGTTTA+CGG 0.349555 7.2:+45151503 None:intergenic
GTTAGAGGTGGTGTTGGAAT+TGG 0.352840 7.2:-45149822 MS.gene45937:CDS
TTTACGGGTGGAGGAGGTGG+TGG 0.359124 7.2:+45151519 None:intergenic
ATGGGAATGGGTGGAGGCGG+AGG 0.360541 7.2:-45149726 MS.gene45937:CDS
AGGTTTACGGGTGGAGGAGG+TGG 0.361398 7.2:+45151516 None:intergenic
CATGCTAGTGCTAGTGTTAA+TGG 0.361695 7.2:-45150242 MS.gene45937:CDS
AGTTTGTGTTGGAGAGGAAC+AGG 0.362327 7.2:-45149629 MS.gene45937:CDS
GGAATGGGTGGAGGCGGAGG+AGG 0.362698 7.2:-45149723 MS.gene45937:CDS
ACCAATCGGTCGGCAATTCC+GGG 0.366503 7.2:-45150753 MS.gene45937:CDS
AGGACGGCGTTGGGAGGTGG+AGG 0.367503 7.2:+45151447 None:intergenic
TTCAGGAAAGAGGGAGGATG+AGG 0.370618 7.2:+45151405 None:intergenic
AGTTTAGAGGCGAGAGGAAT+GGG 0.374247 7.2:-45149848 MS.gene45937:CDS
TCGTGGGATGGTTACTTGAT+TGG 0.374779 7.2:-45150599 MS.gene45937:CDS
AGTTGTGGATAGGGATTTGA+GGG 0.380130 7.2:-45150171 MS.gene45937:CDS
CGATCTCCGACTGTGTTTCC+CGG 0.384422 7.2:+45150735 None:intergenic
GAGATAATGGTTCTGTTGTC+GGG 0.384767 7.2:-45150067 MS.gene45937:CDS
GGCACCGTTTCTCCGGCCAC+TGG 0.385742 7.2:+45149542 None:intergenic
GGTGGTTGTGGTTGAATTTG+TGG 0.386323 7.2:+45151685 None:intergenic
CTGATTGGACCTTCCTTTCG+AGG 0.389614 7.2:+45149521 None:intergenic
GGAAGTTGGAGGACGGCGTT+GGG 0.391399 7.2:+45151438 None:intergenic
TGGAGGACGGCGTTGGGAGG+TGG 0.392544 7.2:+45151444 None:intergenic
TTGATAGGTCTAGTTCTATC+AGG 0.394622 7.2:-45150367 MS.gene45937:CDS
CTGAAGCTTCTTGCTGAAAA+CGG 0.394810 7.2:+45150862 None:intergenic
CAGGAGGTTGAGGGACGGTT+TGG 0.398834 7.2:+45151628 None:intergenic
CCTACCAACAGCATGGATAA+TGG 0.399873 7.2:-45149591 MS.gene45937:CDS
TGAGGAAGTAGGAGGTTTAC+GGG 0.400500 7.2:+45151504 None:intergenic
GAGAGGAATGGGGATGTTAG+AGG 0.402867 7.2:-45149837 MS.gene45937:CDS
TTCGTCTGCGTTTGATTCCC+CGG 0.403080 7.2:+45150431 None:intergenic
TTCTTGAGGGTGAGTTTCGC+AGG 0.405118 7.2:+45151609 None:intergenic
AGTAGGAGGTTTACGGGTGG+AGG 0.406152 7.2:+45151510 None:intergenic
AAGAGCAGCAGCGGCGGTTG+AGG 0.406485 7.2:+45151486 None:intergenic
GAGATCGCGGATTATGGCTT+TGG 0.407582 7.2:-45150719 MS.gene45937:CDS
AGTAGAGGTGGAAATGGTAA+TGG 0.408117 7.2:-45149903 MS.gene45937:CDS
GTAGAGGTGGAAATGGTAAT+GGG 0.412732 7.2:-45149902 MS.gene45937:CDS
AGCAATAGAATGAGCCTGAT+TGG 0.414209 7.2:+45149506 None:intergenic
GAGGTGGCGGTGTTGGAAGT+TGG 0.415426 7.2:+45151424 None:intergenic
AGAGGTGGTGTTGGAATTGG+TGG 0.418218 7.2:-45149819 MS.gene45937:CDS
GTGGCGGTTGTGGTTGATTG+GGG 0.420595 7.2:+45151704 None:intergenic
GGTGTTGGAATTGGTGGTGG+TGG 0.422144 7.2:-45149813 MS.gene45937:CDS
AGAGATAATGGTTCTGTTGT+CGG 0.429136 7.2:-45150068 MS.gene45937:CDS
CGGTTTGGTTGGAGAATTAG+TGG 0.429969 7.2:+45151643 None:intergenic
ATAAAGAGGAGGAGGATGAT+AGG 0.432933 7.2:-45149932 MS.gene45937:CDS
GGCGGTTGTTGCGGTGGTGG+TGG 0.435346 7.2:+45151664 None:intergenic
TATAGTAGTAGAGGTGGAAA+TGG 0.439820 7.2:-45149909 MS.gene45937:CDS
AAAACCGGTGGCTCCTCAAC+GGG 0.441650 7.2:+45150488 None:intergenic
TCGGTCCTTTGAACATGAAC+AGG 0.442021 7.2:+45150521 None:intergenic
GAGTCGTGGCAGGAGTTTAG+AGG 0.443100 7.2:-45149861 MS.gene45937:CDS
AACTCTTGAGCTTGAGCTTG+AGG 0.443403 7.2:+45151229 None:intergenic
AATAGCAGTAATGGGTATCT+TGG 0.444044 7.2:-45149669 MS.gene45937:CDS
CGACCGATTGGTTTCTCCAC+CGG 0.444145 7.2:+45150764 None:intergenic
GGTTGTTGCGGTGGTGGTGG+TGG 0.444381 7.2:+45151667 None:intergenic
ACGGGTGGAGGAGGTGGTGG+AGG 0.444949 7.2:+45151522 None:intergenic
GTGAGTTTCGCAGGAGGTTG+AGG 0.446447 7.2:+45151618 None:intergenic
AGGAGGTTTACGGGTGGAGG+AGG 0.448026 7.2:+45151513 None:intergenic
GGTTGAATTTGTGGCGGTTG+TGG 0.451862 7.2:+45151694 None:intergenic
TTCAAACGAGCCGGAGAAGC+CGG 0.453524 7.2:+45151336 None:intergenic
TCACCATTCTCATTCAAAAC+CGG 0.453891 7.2:+45150473 None:intergenic
TCTGTTGTCGGGAGTAATAA+TGG 0.455392 7.2:-45150056 MS.gene45937:CDS
CTCGAAAGGAAGGTCCAATC+AGG 0.455417 7.2:-45149520 MS.gene45937:CDS
TCAGCAAGAAGCTTCAGAAA+TGG 0.459266 7.2:-45150856 MS.gene45937:CDS
GTAACCTTAGCATTAGAAAC+CGG 0.462641 7.2:+45150302 None:intergenic
AGTGATGTTAATAGCAGTAA+TGG 0.463161 7.2:-45149678 MS.gene45937:CDS
CGCCGCCGACCAGAAACTTC+CGG 0.464680 7.2:+45150886 None:intergenic
AGCTGCTGTTGTTGCTGAGA+TGG 0.466880 7.2:-45150336 MS.gene45937:CDS
GAAGGATTCTCCGGCTTCTC+CGG 0.467759 7.2:-45151346 MS.gene45937:CDS
GTGATGTTAATAGCAGTAAT+GGG 0.468047 7.2:-45149677 MS.gene45937:CDS
CCGATTCATCGACGAGGAGA+AGG 0.468564 7.2:-45150397 MS.gene45937:CDS
ACGCCCAGTGGCCGGAGAAA+CGG 0.468591 7.2:-45149546 MS.gene45937:CDS
CCGAGCATGGGAATGGGTGG+AGG 0.468607 7.2:-45149732 MS.gene45937:CDS
CTTTCGAGGCACCGTTTCTC+CGG 0.469423 7.2:+45149535 None:intergenic
GAAGAAGAGGAAGAAGAAGA+AGG 0.472054 7.2:-45151151 MS.gene45937:CDS
GGGGATGTTAGAGGTGGTGT+TGG 0.474545 7.2:-45149828 MS.gene45937:CDS
AGCATGGGAATGGGTGGAGG+CGG 0.475408 7.2:-45149729 MS.gene45937:CDS
GATGATAGGTATAGTAGTAG+AGG 0.476171 7.2:-45149918 MS.gene45937:CDS
CCCGAAACGCTACCGTTTCG+TGG 0.476435 7.2:+45150803 None:intergenic
TCAACCACAGATAGCATAGT+AGG 0.477773 7.2:+45150551 None:intergenic
CTATTGCTAGAAGTGTACTT+AGG 0.477905 7.2:-45149491 MS.gene45937:CDS
TCCCGGAATTGCCGACCGAT+TGG 0.478109 7.2:+45150752 None:intergenic
TGGGTGGAGGCGGAGGAGGA+GGG 0.479086 7.2:-45149719 MS.gene45937:CDS
TGGAAGTTGGAGGACGGCGT+TGG 0.480914 7.2:+45151437 None:intergenic
TGGTCAGAAAGTTGTGGATA+GGG 0.481641 7.2:-45150180 MS.gene45937:CDS
TTCTTACTCGGAGTCGTGGC+AGG 0.483069 7.2:-45149871 MS.gene45937:CDS
GAGTTTAGAGGCGAGAGGAA+TGG 0.484276 7.2:-45149849 MS.gene45937:CDS
AGTGGCGGTTGTTGCGGTGG+TGG 0.485328 7.2:+45151661 None:intergenic
AAGTTGTGGATAGGGATTTG+AGG 0.487072 7.2:-45150172 MS.gene45937:CDS
GCAGCGGCGGTTGAGGAAGT+AGG 0.494543 7.2:+45151493 None:intergenic
AGGAAGGGATGAGTTTGTGT+TGG 0.494812 7.2:-45149640 MS.gene45937:CDS
TGGCGGTTGTGGTTGATTGG+GGG 0.495058 7.2:+45151705 None:intergenic
GAATGCACCGAGCATGGGAA+TGG 0.495277 7.2:-45149739 MS.gene45937:CDS
CCTCCACCCATTCCCATGCT+CGG 0.495888 7.2:+45149732 None:intergenic
TTGGAGGAATGCACCGAGCA+TGG 0.498605 7.2:-45149745 MS.gene45937:CDS
AATGGGTATCTTGGCAGAAA+AGG 0.499659 7.2:-45149660 MS.gene45937:CDS
TGATAGAACTAGACCTATCA+AGG 0.502474 7.2:+45150369 None:intergenic
TAATTCGAATAATTCGTTGA+GGG 0.502690 7.2:-45150126 MS.gene45937:CDS
TCTACTTAACGCCCAGTGGC+CGG 0.503962 7.2:-45149554 MS.gene45937:CDS
ATGGTCAGAAAGTTGTGGAT+AGG 0.504205 7.2:-45150181 MS.gene45937:CDS
TCGCGGATTATGGCTTTGGC+AGG 0.506259 7.2:-45150715 MS.gene45937:CDS
GGAGAAGGAAAAGCCTTGAT+AGG 0.506954 7.2:-45150382 MS.gene45937:CDS
TGCGGCGGAGTTCAGGAAAG+AGG 0.508872 7.2:+45151395 None:intergenic
GCTACGACCACGAACGTCAC+AGG 0.508883 7.2:+45151300 None:intergenic
GGTGGTGTTGGAATTGGTGG+TGG 0.509746 7.2:-45149816 MS.gene45937:CDS
TTGTCGGGAGTAATAATGGC+GGG 0.511399 7.2:-45150052 MS.gene45937:CDS
TGAGTTTCGCAGGAGGTTGA+GGG 0.515738 7.2:+45151619 None:intergenic
TCGACGAGCCACGAGCTTCG+TGG 0.516431 7.2:-45150616 MS.gene45937:CDS
GCACCGTTTCTCCGGCCACT+GGG 0.516795 7.2:+45149543 None:intergenic
AGGCGTTCGCAGAGGCATGA+AGG 0.516818 7.2:+45151568 None:intergenic
TGAAGAAGAAAACGAAGAAG+AGG 0.518990 7.2:-45151164 MS.gene45937:CDS
AAAGCTGCTTGGAGTATTTG+GGG 0.519040 7.2:-45149987 MS.gene45937:CDS
CGAAAATCCTGTGACGTTCG+TGG 0.521358 7.2:-45151307 MS.gene45937:CDS
GAATAATAATAAAGAGGAGG+AGG 0.523240 7.2:-45149940 MS.gene45937:CDS
GGTATTGATTATTTGTTACA+TGG 0.523656 7.2:-45150200 MS.gene45937:CDS
GTTTAGAGGCGAGAGGAATG+GGG 0.524669 7.2:-45149847 MS.gene45937:CDS
CCAGTAAATGGAAAGCTGCT+TGG 0.529264 7.2:-45149998 MS.gene45937:CDS
GATAGGTATAGTAGTAGAGG+TGG 0.531092 7.2:-45149915 MS.gene45937:CDS
CGCTGTGGTTGTTGTATCTG+TGG 0.531128 7.2:+45151082 None:intergenic
CTCAACGGGTATAAGTGAAT+CGG 0.531899 7.2:+45150502 None:intergenic
AGATCCATGTGCTCCTTCAT+CGG 0.534119 7.2:+45150956 None:intergenic
AGGTTGAGGGACGGTTTGGT+TGG 0.534630 7.2:+45151632 None:intergenic
TGGAGGGAATAATAATAAAG+AGG 0.535223 7.2:-45149946 MS.gene45937:CDS
AAGCAGAAAGCAAAGAAAAG+AGG 0.535351 7.2:-45150827 MS.gene45937:CDS
TGAGATGGATGAGCTCAAAC+CGG 0.537135 7.2:-45150321 MS.gene45937:CDS
CGGATTATGGCTTTGGCAGG+AGG 0.537390 7.2:-45150712 MS.gene45937:CDS
TGGGGTGGAGCGTTCTTACT+CGG 0.538075 7.2:-45149883 MS.gene45937:CDS
GAGGCATGAAGGGCAGAAGC+CGG 0.539062 7.2:+45151579 None:intergenic
AATGCACCGAGCATGGGAAT+GGG 0.539420 7.2:-45149738 MS.gene45937:CDS
AAAGAGGGAGGATGAGGTGG+CGG 0.542205 7.2:+45151411 None:intergenic
GGCTTTAAGAGCAGCAGCGG+CGG 0.544384 7.2:+45151480 None:intergenic
GATTTCTTTCAAATCTCGCC+CGG 0.544868 7.2:+45150910 None:intergenic
TGGAGGAATGCACCGAGCAT+GGG 0.549427 7.2:-45149744 MS.gene45937:CDS
CGACGAGCCACGAGCTTCGT+GGG 0.549545 7.2:-45150615 MS.gene45937:CDS
ATAGTAGGCAAAGGCACCCT+TGG 0.550274 7.2:+45150566 None:intergenic
CGGAGAAACGGTGCCTCGAA+AGG 0.550290 7.2:-45149534 MS.gene45937:CDS
GGCGGTTGTGGTTGATTGGG+GGG 0.551101 7.2:+45151706 None:intergenic
GGCGTTGGGAGGTGGAGGGA+CGG 0.552250 7.2:+45151452 None:intergenic
GGCGTTCGCAGAGGCATGAA+GGG 0.555544 7.2:+45151569 None:intergenic
GGGATGAGTTTGTGTTGGAG+AGG 0.556006 7.2:-45149635 MS.gene45937:CDS
TCGCTGAGGTTCAAACGAGC+CGG 0.557920 7.2:+45151327 None:intergenic
CCATTATCCATGCTGTTGGT+AGG 0.559362 7.2:+45149591 None:intergenic
TTTATACATCGTCGGAGTGG+AGG 0.560754 7.2:-45149963 MS.gene45937:CDS
TGGATAATGGTGGTCTCTTG+AGG 0.561050 7.2:-45149578 MS.gene45937:CDS
TTGCCGGTGGAGAAACCAAT+CGG 0.561738 7.2:-45150767 MS.gene45937:CDS
ATGCTCCTGTTCATGTTCAA+AGG 0.564280 7.2:-45150526 MS.gene45937:CDS
GTTACATGGTCAGAAAGTTG+TGG 0.564393 7.2:-45150186 MS.gene45937:CDS
TTATACATCGTCGGAGTGGA+GGG 0.566386 7.2:-45149962 MS.gene45937:CDS
CAAACCGGTTTCTAATGCTA+AGG 0.567676 7.2:-45150306 MS.gene45937:CDS
ACAGATACAACAACCACAGC+GGG 0.568507 7.2:-45151080 MS.gene45937:CDS
AAGAAAAGAGGTCCACGAAA+CGG 0.569289 7.2:-45150815 MS.gene45937:CDS
CAAAACCGGTGGCTCCTCAA+CGG 0.569831 7.2:+45150487 None:intergenic
GAAACGGTGCCTCGAAAGGA+AGG 0.570868 7.2:-45149530 MS.gene45937:CDS
GCATGAACACTAGCAGTAGC+AGG 0.571142 7.2:+45150278 None:intergenic
AGAATCATTGAAACCGATGA+AGG 0.571416 7.2:-45150969 MS.gene45937:CDS
CGCCGGAAGTTTCTGGTCGG+CGG 0.571430 7.2:-45150888 MS.gene45937:CDS
AAGCCGGTGAAAACTTCTTG+AGG 0.573433 7.2:+45151595 None:intergenic
AGTTGGAGGACGGCGTTGGG+AGG 0.573502 7.2:+45151441 None:intergenic
TATACCCGTTGAGGAGCCAC+CGG 0.576804 7.2:-45150492 MS.gene45937:CDS
GCAATAGTAGTGTCAGTTGG+AGG 0.577464 7.2:-45149761 MS.gene45937:CDS
TCTTCTTCAGACTCAATGAA+CGG 0.579328 7.2:+45151178 None:intergenic
AGGAAAGAGGGAGGATGAGG+TGG 0.581217 7.2:+45151408 None:intergenic
GGTGTTGTTTGGATCGAGAA+CGG 0.581491 7.2:+45151543 None:intergenic
GGTATCTTGGCAGAAAAGGA+AGG 0.581764 7.2:-45149656 MS.gene45937:CDS
GTGGCGGTGTTGGAAGTTGG+AGG 0.581972 7.2:+45151427 None:intergenic
GGAGCAATAGTAGTGTCAGT+TGG 0.584572 7.2:-45149764 MS.gene45937:CDS
TTGAGGGTGAGTTTCGCAGG+AGG 0.584729 7.2:+45151612 None:intergenic
ACCACCATTATCCATGCTGT+TGG 0.585092 7.2:+45149587 None:intergenic
GCGGCGGAGTTCAGGAAAGA+GGG 0.587894 7.2:+45151396 None:intergenic
CTAATTCGAATAATTCGTTG+AGG 0.588242 7.2:-45150127 MS.gene45937:CDS
ATTAGTGGCGGTTGTTGCGG+TGG 0.589849 7.2:+45151658 None:intergenic
AGCCGGTGAAAACTTCTTGA+GGG 0.592647 7.2:+45151596 None:intergenic
CTTTACTCTCTTCAATCAAG+CGG 0.593912 7.2:-45151272 MS.gene45937:CDS
GCAAGAAGCTTCAGAAATGG+AGG 0.595059 7.2:-45150853 MS.gene45937:CDS
AGGTGGAAATGGTAATGGGG+TGG 0.596305 7.2:-45149898 MS.gene45937:CDS
AGAAGATTCAGACGAAATCA+GGG 0.596492 7.2:-45151113 MS.gene45937:CDS
GGTGGTGTTAATGCTAATGC+TGG 0.596698 7.2:-45150221 MS.gene45937:CDS
GTCGGGAGTAATAATGGCGG+GGG 0.597059 7.2:-45150050 MS.gene45937:CDS
TGTCGGGAGTAATAATGGCG+GGG 0.597219 7.2:-45150051 MS.gene45937:CDS
TTTGCCTACTATGCTATCTG+TGG 0.597751 7.2:-45150555 MS.gene45937:CDS
AGAATTAGTGGCGGTTGTTG+CGG 0.598407 7.2:+45151655 None:intergenic
ACATTTGATAATTCCCGCTG+TGG 0.600027 7.2:+45151067 None:intergenic
GCACCGAGCATGGGAATGGG+TGG 0.602722 7.2:-45149735 MS.gene45937:CDS
CGGTGTTGGAAGTTGGAGGA+CGG 0.603473 7.2:+45151431 None:intergenic
GAGCCACGAGCTTCGTGGGA+TGG 0.604745 7.2:-45150611 MS.gene45937:CDS
CGATTCACTTATACCCGTTG+AGG 0.605957 7.2:-45150501 MS.gene45937:CDS
CCATTCTCATTCAAAACCGG+TGG 0.606193 7.2:+45150476 None:intergenic
GCGGCGGTTGAGGAAGTAGG+AGG 0.613689 7.2:+45151496 None:intergenic
ACTAGCATGAACACTAGCAC+TGG 0.618421 7.2:+45150256 None:intergenic
GGACGGCGTTGGGAGGTGGA+GGG 0.619115 7.2:+45151448 None:intergenic
GAAACCGATGAAGGAGCACA+TGG 0.621131 7.2:-45150960 MS.gene45937:CDS
AGCGTTCTTACTCGGAGTCG+TGG 0.621651 7.2:-45149875 MS.gene45937:CDS
GTGGTGGTAATGGTTTCGAT+AGG 0.624227 7.2:-45149797 MS.gene45937:CDS
AGGGAATAATAATAAAGAGG+AGG 0.627615 7.2:-45149943 MS.gene45937:CDS
GGAAACACAGTCGGAGATCG+CGG 0.628056 7.2:-45150732 MS.gene45937:CDS
AATGGCTTTAAGAGCAGCAG+CGG 0.628959 7.2:+45151477 None:intergenic
CGGTGGAGAAACCAATCGGT+CGG 0.630712 7.2:-45150763 MS.gene45937:CDS
TTTCGCAGGAGGTTGAGGGA+CGG 0.635440 7.2:+45151623 None:intergenic
CGAGATTTGAAAGAAATCGC+CGG 0.635652 7.2:-45150905 MS.gene45937:CDS
AGGAATGGGGATGTTAGAGG+TGG 0.639066 7.2:-45149834 MS.gene45937:CDS
ATATTCTCCTACCAACAGCA+TGG 0.640802 7.2:-45149598 MS.gene45937:CDS
GTTTCGATAGGAAGATGTTG+AGG 0.641118 7.2:-45149785 MS.gene45937:CDS
GGAAGTAGGAGGTTTACGGG+TGG 0.642372 7.2:+45151507 None:intergenic
GGTTGTGGTTGAATTTGTGG+CGG 0.653644 7.2:+45151688 None:intergenic
GTATCTTGGCAGAAAAGGAA+GGG 0.654337 7.2:-45149655 MS.gene45937:CDS
GCAATTCCGGGAAACACAGT+CGG 0.656643 7.2:-45150741 MS.gene45937:CDS
TAACCATCCCACGAAGCTCG+TGG 0.657251 7.2:+45150608 None:intergenic
AGGCTCTACTTAACGCCCAG+TGG 0.658591 7.2:-45149558 MS.gene45937:CDS
GCAATATCAAGCGAAAACCT+CGG 0.659790 7.2:+45150674 None:intergenic
GAACGGCGAGGCGTTCGCAG+AGG 0.662076 7.2:+45151560 None:intergenic
GGCAGGAGTTTAGAGGCGAG+AGG 0.664485 7.2:-45149854 MS.gene45937:CDS
ACAGATAGCATAGTAGGCAA+AGG 0.667192 7.2:+45150557 None:intergenic
TAGAGGTGGAAATGGTAATG+GGG 0.670255 7.2:-45149901 MS.gene45937:CDS
ACCAACAGCATGGATAATGG+TGG 0.681176 7.2:-45149588 MS.gene45937:CDS
CACAGATACAACAACCACAG+CGG 0.687620 7.2:-45151081 MS.gene45937:CDS
GCTAGTGCTAGTGTTAATGG+TGG 0.688223 7.2:-45150239 MS.gene45937:CDS
GTTGTCGGGAGTAATAATGG+CGG 0.688552 7.2:-45150053 MS.gene45937:CDS
AATCGCCGGAAGTTTCTGGT+CGG 0.693087 7.2:-45150891 MS.gene45937:CDS
GGCTCGTCGAAAGAATACCT+CGG 0.695013 7.2:+45150629 None:intergenic
GCGGAGTTCAGGAAAGAGGG+AGG 0.701130 7.2:+45151399 None:intergenic
CGGAGAAGGATTTAGTGCGG+CGG 0.706003 7.2:+45151380 None:intergenic
AGGCGGAGAAGGATTTAGTG+CGG 0.708493 7.2:+45151377 None:intergenic
TTTGGTTGGAGAATTAGTGG+CGG 0.711921 7.2:+45151646 None:intergenic
GGTCATGTGATACTGATCCG+AGG 0.726181 7.2:-45150691 MS.gene45937:CDS
TGTCGTTCGATAATGATCCG+AGG 0.727327 7.2:-45150646 MS.gene45937:CDS
TGTTTGGATCGAGAACGGCG+AGG 0.735915 7.2:+45151548 None:intergenic
ATTATTCCGATTCATCGACG+AGG 0.756080 7.2:-45150403 MS.gene45937:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TAATTCGAATAATTCGTTGA+GGG - chr7.2:45151068-45151087 MS.gene45937:CDS 25.0%
!! AGAGATTAATGTGAATTTTC+CGG - chr7.2:45150744-45150763 MS.gene45937:CDS 25.0%
!!! GGTATTGATTATTTGTTACA+TGG - chr7.2:45150994-45151013 MS.gene45937:CDS 25.0%
AGGGAATAATAATAAAGAGG+AGG - chr7.2:45151251-45151270 MS.gene45937:CDS 30.0%
AGTGATGTTAATAGCAGTAA+TGG - chr7.2:45151516-45151535 MS.gene45937:CDS 30.0%
CTAATTCGAATAATTCGTTG+AGG - chr7.2:45151067-45151086 MS.gene45937:CDS 30.0%
GAATAATAATAAAGAGGAGG+AGG - chr7.2:45151254-45151273 MS.gene45937:CDS 30.0%
GTGATGTTAATAGCAGTAAT+GGG - chr7.2:45151517-45151536 MS.gene45937:CDS 30.0%
TGGAGGGAATAATAATAAAG+AGG - chr7.2:45151248-45151267 MS.gene45937:CDS 30.0%
! AGATTAATGTGAATTTTCCG+GGG - chr7.2:45150746-45150765 MS.gene45937:CDS 30.0%
! GAGATTAATGTGAATTTTCC+GGG - chr7.2:45150745-45150764 MS.gene45937:CDS 30.0%
AAGAAGATTCAGACGAAATC+AGG - chr7.2:45150080-45150099 MS.gene45937:CDS 35.0%
AAGCAGAAAGCAAAGAAAAG+AGG - chr7.2:45150367-45150386 MS.gene45937:CDS 35.0%
AGAAGATTCAGACGAAATCA+GGG - chr7.2:45150081-45150100 MS.gene45937:CDS 35.0%
AGAATCATTGAAACCGATGA+AGG - chr7.2:45150225-45150244 MS.gene45937:CDS 35.0%
CTTTACTCTCTTCAATCAAG+CGG - chr7.2:45149922-45149941 MS.gene45937:CDS 35.0%
GATGATAGGTATAGTAGTAG+AGG - chr7.2:45151276-45151295 MS.gene45937:CDS 35.0%
GATTGGAAAAACGTTTCCAA+GGG - chr7.2:45150612-45150631 MS.gene45937:CDS 35.0%
GTAACCTTAGCATTAGAAAC+CGG + chr7.2:45150895-45150914 None:intergenic 35.0%
TATAGTAGTAGAGGTGGAAA+TGG - chr7.2:45151285-45151304 MS.gene45937:CDS 35.0%
TCACCATTCTCATTCAAAAC+CGG + chr7.2:45150724-45150743 None:intergenic 35.0%
TCTTCTGTAAAAACAAGCTC+TGG + chr7.2:45150208-45150227 None:intergenic 35.0%
TCTTCTTCAGACTCAATGAA+CGG + chr7.2:45150019-45150038 None:intergenic 35.0%
TGAAGAAGAAAACGAAGAAG+AGG - chr7.2:45150030-45150049 MS.gene45937:CDS 35.0%
TGATAGAACTAGACCTATCA+AGG + chr7.2:45150828-45150847 None:intergenic 35.0%
TGATTGGAAAAACGTTTCCA+AGG - chr7.2:45150611-45150630 MS.gene45937:CDS 35.0%
! AGAGATAATGGTTCTGTTGT+CGG - chr7.2:45151126-45151145 MS.gene45937:CDS 35.0%
! CTATTGCTAGAAGTGTACTT+AGG - chr7.2:45151703-45151722 MS.gene45937:CDS 35.0%
! TTTTCACGAGATTGTTGAAG+AGG - chr7.2:45150162-45150181 MS.gene45937:CDS 35.0%
!! AATAGCAGTAATGGGTATCT+TGG - chr7.2:45151525-45151544 MS.gene45937:CDS 35.0%
!! TCTGGTTCTGGTATAATTTC+TGG + chr7.2:45150190-45150209 None:intergenic 35.0%
!! TTGATAGGTCTAGTTCTATC+AGG - chr7.2:45150827-45150846 MS.gene45937:CDS 35.0%
!! TTTGGGGTTTTATACATCGT+CGG - chr7.2:45151223-45151242 MS.gene45937:CDS 35.0%
!!! TGTTCCGAGAGTTTTGAATT+GGG - chr7.2:45151096-45151115 MS.gene45937:CDS 35.0%
!!! TTGTTCCGAGAGTTTTGAAT+TGG - chr7.2:45151095-45151114 MS.gene45937:CDS 35.0%
AAGAAAAGAGGTCCACGAAA+CGG - chr7.2:45150379-45150398 MS.gene45937:CDS 40.0%
AAGTTGTGGATAGGGATTTG+AGG - chr7.2:45151022-45151041 MS.gene45937:CDS 40.0%
AATGGGTATCTTGGCAGAAA+AGG - chr7.2:45151534-45151553 MS.gene45937:CDS 40.0%
ACAGATAGCATAGTAGGCAA+AGG + chr7.2:45150640-45150659 None:intergenic 40.0%
AGCAATAGAATGAGCCTGAT+TGG + chr7.2:45151691-45151710 None:intergenic 40.0%
AGTAGAGGTGGAAATGGTAA+TGG - chr7.2:45151291-45151310 MS.gene45937:CDS 40.0%
AGTTGTGGATAGGGATTTGA+GGG - chr7.2:45151023-45151042 MS.gene45937:CDS 40.0%
ATAAAGAGGAGGAGGATGAT+AGG - chr7.2:45151262-45151281 MS.gene45937:CDS 40.0%
ATATTCTCCTACCAACAGCA+TGG - chr7.2:45151596-45151615 MS.gene45937:CDS 40.0%
ATGCTCCTGTTCATGTTCAA+AGG - chr7.2:45150668-45150687 MS.gene45937:CDS 40.0%
ATGGTCAGAAAGTTGTGGAT+AGG - chr7.2:45151013-45151032 MS.gene45937:CDS 40.0%
ATTATTCCGATTCATCGACG+AGG - chr7.2:45150791-45150810 MS.gene45937:CDS 40.0%
CATGCTAGTGCTAGTGTTAA+TGG - chr7.2:45150952-45150971 MS.gene45937:CDS 40.0%
CGAAGAAGAGTTCCAGTAAA+TGG - chr7.2:45151184-45151203 MS.gene45937:CDS 40.0%
CGAGATTTGAAAGAAATCGC+CGG - chr7.2:45150289-45150308 MS.gene45937:CDS 40.0%
CTCAACGGGTATAAGTGAAT+CGG + chr7.2:45150695-45150714 None:intergenic 40.0%
CTGAAGCTTCTTGCTGAAAA+CGG + chr7.2:45150335-45150354 None:intergenic 40.0%
GAAGAAGAGGAAGAAGAAGA+AGG - chr7.2:45150043-45150062 MS.gene45937:CDS 40.0%
GATAGGTATAGTAGTAGAGG+TGG - chr7.2:45151279-45151298 MS.gene45937:CDS 40.0%
GATTTCTTTCAAATCTCGCC+CGG + chr7.2:45150287-45150306 None:intergenic 40.0%
GCAATATCAAGCGAAAACCT+CGG + chr7.2:45150523-45150542 None:intergenic 40.0%
GTAGAGGTGGAAATGGTAAT+GGG - chr7.2:45151292-45151311 MS.gene45937:CDS 40.0%
GTATCTTGGCAGAAAAGGAA+GGG - chr7.2:45151539-45151558 MS.gene45937:CDS 40.0%
GTTACATGGTCAGAAAGTTG+TGG - chr7.2:45151008-45151027 MS.gene45937:CDS 40.0%
GTTTCGATAGGAAGATGTTG+AGG - chr7.2:45151409-45151428 MS.gene45937:CDS 40.0%
TCAACCACAGATAGCATAGT+AGG + chr7.2:45150646-45150665 None:intergenic 40.0%
TCACAACCGAAGAAAAACTC+CGG - chr7.2:45150265-45150284 MS.gene45937:CDS 40.0%
TCAGCAAGAAGCTTCAGAAA+TGG - chr7.2:45150338-45150357 MS.gene45937:CDS 40.0%
TCCAAAAACGAAGGATTCTC+CGG - chr7.2:45149839-45149858 MS.gene45937:CDS 40.0%
TCTGTTGTCGGGAGTAATAA+TGG - chr7.2:45151138-45151157 MS.gene45937:CDS 40.0%
TGGTCAGAAAGTTGTGGATA+GGG - chr7.2:45151014-45151033 MS.gene45937:CDS 40.0%
TTGAGGAAGTAGGAGGTTTA+CGG + chr7.2:45149694-45149713 None:intergenic 40.0%
TTTGCCTACTATGCTATCTG+TGG - chr7.2:45150639-45150658 MS.gene45937:CDS 40.0%
TTTGGTTGGAGAATTAGTGG+CGG + chr7.2:45149551-45149570 None:intergenic 40.0%
! AAAGCTGCTTGGAGTATTTG+GGG - chr7.2:45151207-45151226 MS.gene45937:CDS 40.0%
! ACATTTGATAATTCCCGCTG+TGG + chr7.2:45150130-45150149 None:intergenic 40.0%
! CAAACCGGTTTCTAATGCTA+AGG - chr7.2:45150888-45150907 MS.gene45937:CDS 40.0%
! GAAAGCTGCTTGGAGTATTT+GGG - chr7.2:45151206-45151225 MS.gene45937:CDS 40.0%
! GAGATAATGGTTCTGTTGTC+GGG - chr7.2:45151127-45151146 MS.gene45937:CDS 40.0%
! GTAAAAACAAGCTCTGGTTC+TGG + chr7.2:45150202-45150221 None:intergenic 40.0%
! TAGAGGTGGAAATGGTAATG+GGG - chr7.2:45151293-45151312 MS.gene45937:CDS 40.0%
!!! GTTCCGAGAGTTTTGAATTG+GGG - chr7.2:45151097-45151116 MS.gene45937:CDS 40.0%
!!! TTCCGAGAGTTTTGAATTGG+GGG - chr7.2:45151098-45151117 MS.gene45937:CDS 40.0%
!!! TTGGGGGGTTTTAGAGATAA+TGG - chr7.2:45151114-45151133 MS.gene45937:CDS 40.0%
AACTCTTGAGCTTGAGCTTG+AGG + chr7.2:45149968-45149987 None:intergenic 45.0%
AAGAAATCGCCGGAAGTTTC+TGG - chr7.2:45150299-45150318 MS.gene45937:CDS 45.0%
AAGCCGGTGAAAACTTCTTG+AGG + chr7.2:45149602-45149621 None:intergenic 45.0%
ACAGATACAACAACCACAGC+GGG - chr7.2:45150114-45150133 MS.gene45937:CDS 45.0%
ACCACCATTATCCATGCTGT+TGG + chr7.2:45151610-45151629 None:intergenic 45.0%
ACCCCCCAATTCAAAACTCT+CGG + chr7.2:45151103-45151122 None:intergenic 45.0%
ACTAGCATGAACACTAGCAC+TGG + chr7.2:45150941-45150960 None:intergenic 45.0%
AGAATTAGTGGCGGTTGTTG+CGG + chr7.2:45149542-45149561 None:intergenic 45.0%
AGATCCATGTGCTCCTTCAT+CGG + chr7.2:45150241-45150260 None:intergenic 45.0%
AGCCGGTGAAAACTTCTTGA+GGG + chr7.2:45149601-45149620 None:intergenic 45.0%
AGGAAGGGATGAGTTTGTGT+TGG - chr7.2:45151554-45151573 MS.gene45937:CDS 45.0%
AGTTTAGAGGCGAGAGGAAT+GGG - chr7.2:45151346-45151365 MS.gene45937:CDS 45.0%
AGTTTGTGTTGGAGAGGAAC+AGG - chr7.2:45151565-45151584 MS.gene45937:CDS 45.0%
CACAACCGAAGAAAAACTCC+GGG - chr7.2:45150266-45150285 MS.gene45937:CDS 45.0%
CACAGATACAACAACCACAG+CGG - chr7.2:45150113-45150132 MS.gene45937:CDS 45.0%
CCAAGCAGCTTTCCATTTAC+TGG + chr7.2:45151199-45151218 None:intergenic 45.0%
CCAGTAAATGGAAAGCTGCT+TGG - chr7.2:45151196-45151215 MS.gene45937:CDS 45.0%
CCATTATCCATGCTGTTGGT+AGG + chr7.2:45151606-45151625 None:intergenic 45.0%
CCATTCTCATTCAAAACCGG+TGG + chr7.2:45150721-45150740 None:intergenic 45.0%
CCTACCAACAGCATGGATAA+TGG - chr7.2:45151603-45151622 MS.gene45937:CDS 45.0%
CGATTCACTTATACCCGTTG+AGG - chr7.2:45150693-45150712 MS.gene45937:CDS 45.0%
GAGCTTGAGCTTGAGGTTTA+GGG + chr7.2:45149961-45149980 None:intergenic 45.0%
GCAAGAAGCTTCAGAAATGG+AGG - chr7.2:45150341-45150360 MS.gene45937:CDS 45.0%
GCAATAGTAGTGTCAGTTGG+AGG - chr7.2:45151433-45151452 MS.gene45937:CDS 45.0%
GCTAGTGCTAGTGTTAATGG+TGG - chr7.2:45150955-45150974 MS.gene45937:CDS 45.0%
GGAGAAGGAAAAGCCTTGAT+AGG - chr7.2:45150812-45150831 MS.gene45937:CDS 45.0%
GGAGCAATAGTAGTGTCAGT+TGG - chr7.2:45151430-45151449 MS.gene45937:CDS 45.0%
GGTATCTTGGCAGAAAAGGA+AGG - chr7.2:45151538-45151557 MS.gene45937:CDS 45.0%
GGTGGTTGTGGTTGAATTTG+TGG + chr7.2:45149512-45149531 None:intergenic 45.0%
GGTTGTGGTTGAATTTGTGG+CGG + chr7.2:45149509-45149528 None:intergenic 45.0%
GTTGTCGGGAGTAATAATGG+CGG - chr7.2:45151141-45151160 MS.gene45937:CDS 45.0%
TCGGTCCTTTGAACATGAAC+AGG + chr7.2:45150676-45150695 None:intergenic 45.0%
TCGTGGGATGGTTACTTGAT+TGG - chr7.2:45150595-45150614 MS.gene45937:CDS 45.0%
TGAGATGGATGAGCTCAAAC+CGG - chr7.2:45150873-45150892 MS.gene45937:CDS 45.0%
TGAGCTTGAGCTTGAGGTTT+AGG + chr7.2:45149962-45149981 None:intergenic 45.0%
TGAGGAAGTAGGAGGTTTAC+GGG + chr7.2:45149693-45149712 None:intergenic 45.0%
TGTCGTTCGATAATGATCCG+AGG - chr7.2:45150548-45150567 MS.gene45937:CDS 45.0%
TTATACATCGTCGGAGTGGA+GGG - chr7.2:45151232-45151251 MS.gene45937:CDS 45.0%
TTGTCGGGAGTAATAATGGC+GGG - chr7.2:45151142-45151161 MS.gene45937:CDS 45.0%
TTTATACATCGTCGGAGTGG+AGG - chr7.2:45151231-45151250 MS.gene45937:CDS 45.0%
! ACCAACAGCATGGATAATGG+TGG - chr7.2:45151606-45151625 MS.gene45937:CDS 45.0%
! CACCCTCAAGAAGTTTTCAC+CGG - chr7.2:45149596-45149615 MS.gene45937:CDS 45.0%
! GGAAAGCTGCTTGGAGTATT+TGG - chr7.2:45151205-45151224 MS.gene45937:CDS 45.0%
! GGTGGTGTTAATGCTAATGC+TGG - chr7.2:45150973-45150992 MS.gene45937:CDS 45.0%
! GTTAGAGGTGGTGTTGGAAT+TGG - chr7.2:45151372-45151391 MS.gene45937:CDS 45.0%
! TGGATAATGGTGGTCTCTTG+AGG - chr7.2:45151616-45151635 MS.gene45937:CDS 45.0%
!! AATGGCTTTAAGAGCAGCAG+CGG + chr7.2:45149720-45149739 None:intergenic 45.0%
!! CGGTTTGGTTGGAGAATTAG+TGG + chr7.2:45149554-45149573 None:intergenic 45.0%
!! GAATCCTTCGTTTTTGGAGG+CGG + chr7.2:45149837-45149856 None:intergenic 45.0%
!! GGAGAATCCTTCGTTTTTGG+AGG + chr7.2:45149840-45149859 None:intergenic 45.0%
!! GGTGTTGTTTGGATCGAGAA+CGG + chr7.2:45149654-45149673 None:intergenic 45.0%
!! GGTTTTATACATCGTCGGAG+TGG - chr7.2:45151228-45151247 MS.gene45937:CDS 45.0%
!! GTGGTGGTAATGGTTTCGAT+AGG - chr7.2:45151397-45151416 MS.gene45937:CDS 45.0%
!!! CCACCGGTTTTGAATGAGAA+TGG - chr7.2:45150718-45150737 MS.gene45937:CDS 45.0%
!!! TCCGAGAGTTTTGAATTGGG+GGG - chr7.2:45151099-45151118 MS.gene45937:CDS 45.0%
AACCAATCGGTCGGCAATTC+CGG - chr7.2:45150440-45150459 MS.gene45937:CDS 50.0%
AATGCACCGAGCATGGGAAT+GGG - chr7.2:45151456-45151475 MS.gene45937:CDS 50.0%
AGCTGCTGTTGTTGCTGAGA+TGG - chr7.2:45150858-45150877 MS.gene45937:CDS 50.0%
AGGAATGGGGATGTTAGAGG+TGG - chr7.2:45151360-45151379 MS.gene45937:CDS 50.0%
AGGCGGAGAAGGATTTAGTG+CGG + chr7.2:45149820-45149839 None:intergenic 50.0%
CCTTCTCCTCGTCGATGAAT+CGG + chr7.2:45150800-45150819 None:intergenic 50.0%
CGAAAATCCTGTGACGTTCG+TGG - chr7.2:45149887-45149906 MS.gene45937:CDS 50.0%
CGCTGTGGTTGTTGTATCTG+TGG + chr7.2:45150115-45150134 None:intergenic 50.0%
CTCGAAAGGAAGGTCCAATC+AGG - chr7.2:45151674-45151693 MS.gene45937:CDS 50.0%
CTGATTGGACCTTCCTTTCG+AGG + chr7.2:45151676-45151695 None:intergenic 50.0%
GAGAGGAATGGGGATGTTAG+AGG - chr7.2:45151357-45151376 MS.gene45937:CDS 50.0%
GAGTTTAGAGGCGAGAGGAA+TGG - chr7.2:45151345-45151364 MS.gene45937:CDS 50.0%
GCAATTCCGGGAAACACAGT+CGG - chr7.2:45150453-45150472 MS.gene45937:CDS 50.0%
GCATGAACACTAGCAGTAGC+AGG + chr7.2:45150919-45150938 None:intergenic 50.0%
GGCTCGTCGAAAGAATACCT+CGG + chr7.2:45150568-45150587 None:intergenic 50.0%
GGGATGAGTTTGTGTTGGAG+AGG - chr7.2:45151559-45151578 MS.gene45937:CDS 50.0%
GGTCATGTGATACTGATCCG+AGG - chr7.2:45150503-45150522 MS.gene45937:CDS 50.0%
GGTTGAATTTGTGGCGGTTG+TGG + chr7.2:45149503-45149522 None:intergenic 50.0%
GTTTAGAGGCGAGAGGAATG+GGG - chr7.2:45151347-45151366 MS.gene45937:CDS 50.0%
TCCACGAAACGGTAGCGTTT+CGG - chr7.2:45150390-45150409 MS.gene45937:CDS 50.0%
TGAGTTTCGCAGGAGGTTGA+GGG + chr7.2:45149578-45149597 None:intergenic 50.0%
TGTCGGGAGTAATAATGGCG+GGG - chr7.2:45151143-45151162 MS.gene45937:CDS 50.0%
TGTGGCGGTTGTGGTTGATT+GGG + chr7.2:45149494-45149513 None:intergenic 50.0%
TTCAGGAAAGAGGGAGGATG+AGG + chr7.2:45149792-45149811 None:intergenic 50.0%
TTCGTCTGCGTTTGATTCCC+CGG + chr7.2:45150766-45150785 None:intergenic 50.0%
TTCTCCGCCTCCAAAAACGA+AGG - chr7.2:45149830-45149849 MS.gene45937:CDS 50.0%
TTCTTGAGGGTGAGTTTCGC+AGG + chr7.2:45149588-45149607 None:intergenic 50.0%
TTGCCGGTGGAGAAACCAAT+CGG - chr7.2:45150427-45150446 MS.gene45937:CDS 50.0%
TTGTGGCGGTTGTGGTTGAT+TGG + chr7.2:45149495-45149514 None:intergenic 50.0%
! ACGTCACAGGATTTTCGCTG+AGG + chr7.2:45149884-45149903 None:intergenic 50.0%
! AGAGGTGGTGTTGGAATTGG+TGG - chr7.2:45151375-45151394 MS.gene45937:CDS 50.0%
! GAAACCGATGAAGGAGCACA+TGG - chr7.2:45150234-45150253 MS.gene45937:CDS 50.0%
! GAGATCGCGGATTATGGCTT+TGG - chr7.2:45150475-45150494 MS.gene45937:CDS 50.0%
! GCCGGAGAATCCTTCGTTTT+TGG + chr7.2:45149843-45149862 None:intergenic 50.0%
! GGGTTCTTCAACGCTTTTGC+CGG - chr7.2:45150411-45150430 MS.gene45937:CDS 50.0%
! GTAATAATGGCGGGGGTGAT+CGG - chr7.2:45151151-45151170 MS.gene45937:CDS 50.0%
! TCTCGCCCGGAGTTTTTCTT+CGG + chr7.2:45150274-45150293 None:intergenic 50.0%
! TTCTTCAACGCTTTTGCCGG+TGG - chr7.2:45150414-45150433 MS.gene45937:CDS 50.0%
!! AATCGCCGGAAGTTTCTGGT+CGG - chr7.2:45150303-45150322 MS.gene45937:CDS 50.0%
!! AGGTGGAAATGGTAATGGGG+TGG - chr7.2:45151296-45151315 MS.gene45937:CDS 50.0%
!! ATAGTAGGCAAAGGCACCCT+TGG + chr7.2:45150631-45150650 None:intergenic 50.0%
!! GGAATTGGTGGTGGTGGTAA+TGG - chr7.2:45151387-45151406 MS.gene45937:CDS 50.0%
!! TTCGTTTTTGGAGGCGGAGA+AGG + chr7.2:45149831-45149850 None:intergenic 50.0%
AAAACCGGTGGCTCCTCAAC+GGG + chr7.2:45150709-45150728 None:intergenic 55.0%
AAAGAGGGAGGATGAGGTGG+CGG + chr7.2:45149786-45149805 None:intergenic 55.0%
ACCAATCGGTCGGCAATTCC+GGG - chr7.2:45150441-45150460 MS.gene45937:CDS 55.0%
AGCGTTCTTACTCGGAGTCG+TGG - chr7.2:45151319-45151338 MS.gene45937:CDS 55.0%
AGGAAAGAGGGAGGATGAGG+TGG + chr7.2:45149789-45149808 None:intergenic 55.0%
AGGCTCTACTTAACGCCCAG+TGG - chr7.2:45151636-45151655 MS.gene45937:CDS 55.0%
AGTAGGAGGTTTACGGGTGG+AGG + chr7.2:45149687-45149706 None:intergenic 55.0%
ATTAGTGGCGGTTGTTGCGG+TGG + chr7.2:45149539-45149558 None:intergenic 55.0%
CAAAACCGGTGGCTCCTCAA+CGG + chr7.2:45150710-45150729 None:intergenic 55.0%
CCACGAAACGGTAGCGTTTC+GGG - chr7.2:45150391-45150410 MS.gene45937:CDS 55.0%
CCGATTCATCGACGAGGAGA+AGG - chr7.2:45150797-45150816 MS.gene45937:CDS 55.0%
CGATCTCCGACTGTGTTTCC+CGG + chr7.2:45150462-45150481 None:intergenic 55.0%
CGGAGAAGGATTTAGTGCGG+CGG + chr7.2:45149817-45149836 None:intergenic 55.0%
CGGTGGAGAAACCAATCGGT+CGG - chr7.2:45150431-45150450 MS.gene45937:CDS 55.0%
GAAACGGTGCCTCGAAAGGA+AGG - chr7.2:45151664-45151683 MS.gene45937:CDS 55.0%
GAAGGATTCTCCGGCTTCTC+CGG - chr7.2:45149848-45149867 MS.gene45937:CDS 55.0%
GAATGCACCGAGCATGGGAA+TGG - chr7.2:45151455-45151474 MS.gene45937:CDS 55.0%
GAGTCGTGGCAGGAGTTTAG+AGG - chr7.2:45151333-45151352 MS.gene45937:CDS 55.0%
GATTTAGTGCGGCGGAGTTC+AGG + chr7.2:45149809-45149828 None:intergenic 55.0%
GGAAACACAGTCGGAGATCG+CGG - chr7.2:45150462-45150481 MS.gene45937:CDS 55.0%
GGAAGTAGGAGGTTTACGGG+TGG + chr7.2:45149690-45149709 None:intergenic 55.0%
GGGGATGTTAGAGGTGGTGT+TGG - chr7.2:45151366-45151385 MS.gene45937:CDS 55.0%
GTCGGGAGTAATAATGGCGG+GGG - chr7.2:45151144-45151163 MS.gene45937:CDS 55.0%
GTGAGTTTCGCAGGAGGTTG+AGG + chr7.2:45149579-45149598 None:intergenic 55.0%
GTGGCGGTTGTGGTTGATTG+GGG + chr7.2:45149493-45149512 None:intergenic 55.0%
TAACCATCCCACGAAGCTCG+TGG + chr7.2:45150589-45150608 None:intergenic 55.0%
TATACCCGTTGAGGAGCCAC+CGG - chr7.2:45150702-45150721 MS.gene45937:CDS 55.0%
TCGCTGAGGTTCAAACGAGC+CGG + chr7.2:45149870-45149889 None:intergenic 55.0%
TCTACTTAACGCCCAGTGGC+CGG - chr7.2:45151640-45151659 MS.gene45937:CDS 55.0%
TGGAGGAATGCACCGAGCAT+GGG - chr7.2:45151450-45151469 MS.gene45937:CDS 55.0%
TGGCGGTTGTGGTTGATTGG+GGG + chr7.2:45149492-45149511 None:intergenic 55.0%
TGTTTGGATCGAGAACGGCG+AGG + chr7.2:45149649-45149668 None:intergenic 55.0%
TTCAAACGAGCCGGAGAAGC+CGG + chr7.2:45149861-45149880 None:intergenic 55.0%
TTCTTACTCGGAGTCGTGGC+AGG - chr7.2:45151323-45151342 MS.gene45937:CDS 55.0%
TTGAGGGTGAGTTTCGCAGG+AGG + chr7.2:45149585-45149604 None:intergenic 55.0%
TTGGAGGAATGCACCGAGCA+TGG - chr7.2:45151449-45151468 MS.gene45937:CDS 55.0%
TTTCGCAGGAGGTTGAGGGA+CGG + chr7.2:45149574-45149593 None:intergenic 55.0%
! CAGTCGGAGATCGCGGATTA+TGG - chr7.2:45150469-45150488 MS.gene45937:CDS 55.0%
! CGGTGTTGGAAGTTGGAGGA+CGG + chr7.2:45149766-45149785 None:intergenic 55.0%
! GGTGGTGTTGGAATTGGTGG+TGG - chr7.2:45151378-45151397 MS.gene45937:CDS 55.0%
! TGGGGTGGAGCGTTCTTACT+CGG - chr7.2:45151311-45151330 MS.gene45937:CDS 55.0%
!! AGGTTGAGGGACGGTTTGGT+TGG + chr7.2:45149565-45149584 None:intergenic 55.0%
!! CGACCGATTGGTTTCTCCAC+CGG + chr7.2:45150433-45150452 None:intergenic 55.0%
!! CGGATTATGGCTTTGGCAGG+AGG - chr7.2:45150482-45150501 MS.gene45937:CDS 55.0%
!! CTTTCGAGGCACCGTTTCTC+CGG + chr7.2:45151662-45151681 None:intergenic 55.0%
!! GAGGTGGTGGAGGTGTTGTT+TGG + chr7.2:45149665-45149684 None:intergenic 55.0%
!! GGAGGAGGAGGGATTTTTGG+CGG - chr7.2:45151486-45151505 MS.gene45937:CDS 55.0%
!! GGTGTTGGAATTGGTGGTGG+TGG - chr7.2:45151381-45151400 MS.gene45937:CDS 55.0%
!! TCGCGGATTATGGCTTTGGC+AGG - chr7.2:45150479-45150498 MS.gene45937:CDS 55.0%
!!! GAGGAGGAGGGATTTTTGGC+GGG - chr7.2:45151487-45151506 MS.gene45937:CDS 55.0%
AGCATGGGAATGGGTGGAGG+CGG - chr7.2:45151465-45151484 MS.gene45937:CDS 60.0%
AGGAGGTTTACGGGTGGAGG+AGG + chr7.2:45149684-45149703 None:intergenic 60.0%
AGGTTTACGGGTGGAGGAGG+TGG + chr7.2:45149681-45149700 None:intergenic 60.0%
CAGGAGGTTGAGGGACGGTT+TGG + chr7.2:45149569-45149588 None:intergenic 60.0%
CCCGAAACGCTACCGTTTCG+TGG + chr7.2:45150394-45150413 None:intergenic 60.0%
CCTCCACCCATTCCCATGCT+CGG + chr7.2:45151465-45151484 None:intergenic 60.0%
CGGAGAAACGGTGCCTCGAA+AGG - chr7.2:45151660-45151679 MS.gene45937:CDS 60.0%
GAGGCATGAAGGGCAGAAGC+CGG + chr7.2:45149618-45149637 None:intergenic 60.0%
GCGGAGTTCAGGAAAGAGGG+AGG + chr7.2:45149798-45149817 None:intergenic 60.0%
GCGGCGGAGTTCAGGAAAGA+GGG + chr7.2:45149801-45149820 None:intergenic 60.0%
GCTACGACCACGAACGTCAC+AGG + chr7.2:45149897-45149916 None:intergenic 60.0%
GGAAGTTGGAGGACGGCGTT+GGG + chr7.2:45149759-45149778 None:intergenic 60.0%
GGAGGTGGAGGGACGGAAAA+TGG + chr7.2:45149738-45149757 None:intergenic 60.0%
GGCAGGAGTTTAGAGGCGAG+AGG - chr7.2:45151340-45151359 MS.gene45937:CDS 60.0%
GGCGGTTGTGGTTGATTGGG+GGG + chr7.2:45149491-45149510 None:intergenic 60.0%
TCCCGGAATTGCCGACCGAT+TGG + chr7.2:45150445-45150464 None:intergenic 60.0%
TGCGGCGGAGTTCAGGAAAG+AGG + chr7.2:45149802-45149821 None:intergenic 60.0%
TGGAAGTTGGAGGACGGCGT+TGG + chr7.2:45149760-45149779 None:intergenic 60.0%
TTTACGGGTGGAGGAGGTGG+TGG + chr7.2:45149678-45149697 None:intergenic 60.0%
! AATGGCGGGGGTGATCGGAA+AGG - chr7.2:45151156-45151175 MS.gene45937:CDS 60.0%
! AGGCGTTCGCAGAGGCATGA+AGG + chr7.2:45149629-45149648 None:intergenic 60.0%
! GAGGTGGCGGTGTTGGAAGT+TGG + chr7.2:45149773-45149792 None:intergenic 60.0%
! GGCGGAGGAGGAGGGATTTT+TGG - chr7.2:45151483-45151502 MS.gene45937:CDS 60.0%
! GGCGTTCGCAGAGGCATGAA+GGG + chr7.2:45149628-45149647 None:intergenic 60.0%
! GTGGCGGTGTTGGAAGTTGG+AGG + chr7.2:45149770-45149789 None:intergenic 60.0%
!! GGCTTTAAGAGCAGCAGCGG+CGG + chr7.2:45149717-45149736 None:intergenic 60.0%
!!! GAGGAGGGATTTTTGGCGGG+AGG - chr7.2:45151490-45151509 MS.gene45937:CDS 60.0%
AAGAGCAGCAGCGGCGGTTG+AGG + chr7.2:45149711-45149730 None:intergenic 65.0%
ACGCCCAGTGGCCGGAGAAA+CGG - chr7.2:45151648-45151667 MS.gene45937:CDS 65.0%
AGTGGCGGTTGTTGCGGTGG+TGG + chr7.2:45149536-45149555 None:intergenic 65.0%
ATGGGAATGGGTGGAGGCGG+AGG - chr7.2:45151468-45151487 MS.gene45937:CDS 65.0%
CCGAGCATGGGAATGGGTGG+AGG - chr7.2:45151462-45151481 MS.gene45937:CDS 65.0%
CGACGAGCCACGAGCTTCGT+GGG - chr7.2:45150579-45150598 MS.gene45937:CDS 65.0%
CGCCGCCGACCAGAAACTTC+CGG + chr7.2:45150311-45150330 None:intergenic 65.0%
GAGCCACGAGCTTCGTGGGA+TGG - chr7.2:45150583-45150602 MS.gene45937:CDS 65.0%
GCACCGAGCATGGGAATGGG+TGG - chr7.2:45151459-45151478 MS.gene45937:CDS 65.0%
GCACCGTTTCTCCGGCCACT+GGG + chr7.2:45151654-45151673 None:intergenic 65.0%
GCAGCGGCGGTTGAGGAAGT+AGG + chr7.2:45149704-45149723 None:intergenic 65.0%
GCGGCGGTTGAGGAAGTAGG+AGG + chr7.2:45149701-45149720 None:intergenic 65.0%
GCGGGGGTGATCGGAAAGGA+GGG - chr7.2:45151160-45151179 MS.gene45937:CDS 65.0%
TCGACGAGCCACGAGCTTCG+TGG - chr7.2:45150578-45150597 MS.gene45937:CDS 65.0%
! AGTTGGAGGACGGCGTTGGG+AGG + chr7.2:45149756-45149775 None:intergenic 65.0%
! GGAGGATGAGGTGGCGGTGT+TGG + chr7.2:45149780-45149799 None:intergenic 65.0%
!! CGCCGGAAGTTTCTGGTCGG+CGG - chr7.2:45150306-45150325 MS.gene45937:CDS 65.0%
!! GGTTGTTGCGGTGGTGGTGG+TGG + chr7.2:45149530-45149549 None:intergenic 65.0%
!! TGCGGTGGTGGTGGTGGTTG+TGG + chr7.2:45149524-45149543 None:intergenic 65.0%
ATGGGTGGAGGCGGAGGAGG+AGG - chr7.2:45151474-45151493 MS.gene45937:CDS 70.0%
GGAATGGGTGGAGGCGGAGG+AGG - chr7.2:45151471-45151490 MS.gene45937:CDS 70.0%
GGCACCGTTTCTCCGGCCAC+TGG + chr7.2:45151655-45151674 None:intergenic 70.0%
GGCGGGGGTGATCGGAAAGG+AGG - chr7.2:45151159-45151178 MS.gene45937:CDS 70.0%
TGGGTGGAGGCGGAGGAGGA+GGG - chr7.2:45151475-45151494 MS.gene45937:CDS 70.0%
! ACGGGTGGAGGAGGTGGTGG+AGG + chr7.2:45149675-45149694 None:intergenic 70.0%
! AGGACGGCGTTGGGAGGTGG+AGG + chr7.2:45149750-45149769 None:intergenic 70.0%
! GAACGGCGAGGCGTTCGCAG+AGG + chr7.2:45149637-45149656 None:intergenic 70.0%
! GGACGGCGTTGGGAGGTGGA+GGG + chr7.2:45149749-45149768 None:intergenic 70.0%
! GGCGGTTGTTGCGGTGGTGG+TGG + chr7.2:45149533-45149552 None:intergenic 70.0%
! GGCGTTGGGAGGTGGAGGGA+CGG + chr7.2:45149745-45149764 None:intergenic 70.0%
! TGGAGGACGGCGTTGGGAGG+TGG + chr7.2:45149753-45149772 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 45149482 45151734 45149482 ID=MS.gene45937
chr7.2 mRNA 45149482 45151734 45149482 ID=MS.gene45937.t1;Parent=MS.gene45937
chr7.2 exon 45149482 45151734 45149482 ID=MS.gene45937.t1.exon1;Parent=MS.gene45937.t1
chr7.2 CDS 45149482 45151734 45149482 ID=cds.MS.gene45937.t1;Parent=MS.gene45937.t1
Gene Sequence

>MS.gene45937

ATGAATCCCCCCAATCAACCACAACCGCCACAAATTCAACCACAACCACCACCACCACCGCAACAACCGCCACTAATTCTCCAACCAAACCGTCCCTCAACCTCCTGCGAAACTCACCCTCAAGAAGTTTTCACCGGCTTCTGCCCTTCATGCCTCTGCGAACGCCTCGCCGTTCTCGATCCAAACAACACCTCCACCACCTCCTCCACCCGTAAACCTCCTACTTCCTCAACCGCCGCTGCTGCTCTTAAAGCCATTTTCCGTCCCTCCACCTCCCAACGCCGTCCTCCAACTTCCAACACCGCCACCTCATCCTCCCTCTTTCCTGAACTCCGCCGCACTAAATCCTTCTCCGCCTCCAAAAACGAAGGATTCTCCGGCTTCTCCGGCTCGTTTGAACCTCAGCGAAAATCCTGTGACGTTCGTGGTCGTAGCACTCTCTTTACTCTCTTCAATCAAGCGGACGAACGCAAAATCCCTAAACCTCAAGCTCAAGCTCAAGAGTTTGAAGCTTCATCTTCAACTGTTCAGAAACCGTTCATTGAGTCTGAAGAAGAAAACGAAGAAGAGGAAGAAGAAGAAGGTAACATTGTTGTTGAAGAAGATTCAGACGAAATCAGGGTTATTGAGCCACAGATACAACAACCACAGCGGGAATTATCAAATGTGATTGAAGAAACTTTTCACGAGATTGTTGAAGAGGAACCAGAAATTATACCAGAACCAGAGCTTGTTTTTACAGAAGAATCATTGAAACCGATGAAGGAGCACATGGATCTAGATTCACAACCGAAGAAAAACTCCGGGCGAGATTTGAAAGAAATCGCCGGAAGTTTCTGGTCGGCGGCGTCCGTTTTCAGCAAGAAGCTTCAGAAATGGAGGCAGAAGCAGAAAGCAAAGAAAAGAGGTCCACGAAACGGTAGCGTTTCGGGTTCTTCAACGCTTTTGCCGGTGGAGAAACCAATCGGTCGGCAATTCCGGGAAACACAGTCGGAGATCGCGGATTATGGCTTTGGCAGGAGGTCATGTGATACTGATCCGAGGTTTTCGCTTGATATTGCTCGAATGTCGTTCGATAATGATCCGAGGTATTCTTTCGACGAGCCACGAGCTTCGTGGGATGGTTACTTGATTGGAAAAACGTTTCCAAGGGTGCCTTTGCCTACTATGCTATCTGTGGTTGAAGATGCTCCTGTTCATGTTCAAAGGACCGATTCACTTATACCCGTTGAGGAGCCACCGGTTTTGAATGAGAATGGTGAAGAGATTAATGTGAATTTTCCGGGGAATCAAACGCAGACGAAAGAGTATTATTCCGATTCATCGACGAGGAGAAGGAAAAGCCTTGATAGGTCTAGTTCTATCAGGAAAACTGCAGCTGCTGTTGTTGCTGAGATGGATGAGCTCAAACCGGTTTCTAATGCTAAGGTTACTCCTGCTACTGCTAGTGTTCATGCCAGTGCTAGTGTTCATGCTAGTGCTAGTGTTAATGGTGGTGTTAATGCTAATGCTGGTATTGATTATTTGTTACATGGTCAGAAAGTTGTGGATAGGGATTTGAGGGATTATTCAAATAATTCGAATTCTAATTCGAATAATTCGTTGAGGGATGATTGTTCCGAGAGTTTTGAATTGGGGGGTTTTAGAGATAATGGTTCTGTTGTCGGGAGTAATAATGGCGGGGGTGATCGGAAAGGAGGGTCGAAGAAGAGTTCCAGTAAATGGAAAGCTGCTTGGAGTATTTGGGGTTTTATACATCGTCGGAGTGGAGGGAATAATAATAAAGAGGAGGAGGATGATAGGTATAGTAGTAGAGGTGGAAATGGTAATGGGGTGGAGCGTTCTTACTCGGAGTCGTGGCAGGAGTTTAGAGGCGAGAGGAATGGGGATGTTAGAGGTGGTGTTGGAATTGGTGGTGGTGGTAATGGTTTCGATAGGAAGATGTTGAGGAGCAATAGTAGTGTCAGTTGGAGGAATGCACCGAGCATGGGAATGGGTGGAGGCGGAGGAGGAGGGATTTTTGGCGGGAGGAAGAGTGATGTTAATAGCAGTAATGGGTATCTTGGCAGAAAAGGAAGGGATGAGTTTGTGTTGGAGAGGAACAGGAGTGCGAGATATTCTCCTACCAACAGCATGGATAATGGTGGTCTCTTGAGGCTCTACTTAACGCCCAGTGGCCGGAGAAACGGTGCCTCGAAAGGAAGGTCCAATCAGGCTCATTCTATTGCTAGAAGTGTACTTAGGTTGTATTGA

Protein sequence

>MS.gene45937.t1

MNPPNQPQPPQIQPQPPPPPQQPPLILQPNRPSTSCETHPQEVFTGFCPSCLCERLAVLDPNNTSTTSSTRKPPTSSTAAAALKAIFRPSTSQRRPPTSNTATSSSLFPELRRTKSFSASKNEGFSGFSGSFEPQRKSCDVRGRSTLFTLFNQADERKIPKPQAQAQEFEASSSTVQKPFIESEEENEEEEEEEGNIVVEEDSDEIRVIEPQIQQPQRELSNVIEETFHEIVEEEPEIIPEPELVFTEESLKPMKEHMDLDSQPKKNSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKAKKRGPRNGSVSGSSTLLPVEKPIGRQFRETQSEIADYGFGRRSCDTDPRFSLDIARMSFDNDPRYSFDEPRASWDGYLIGKTFPRVPLPTMLSVVEDAPVHVQRTDSLIPVEEPPVLNENGEEINVNFPGNQTQTKEYYSDSSTRRRKSLDRSSSIRKTAAAVVAEMDELKPVSNAKVTPATASVHASASVHASASVNGGVNANAGIDYLLHGQKVVDRDLRDYSNNSNSNSNNSLRDDCSESFELGGFRDNGSVVGSNNGGGDRKGGSKKSSSKWKAAWSIWGFIHRRSGGNNNKEEEDDRYSSRGGNGNGVERSYSESWQEFRGERNGDVRGGVGIGGGGNGFDRKMLRSNSSVSWRNAPSMGMGGGGGGGIFGGRKSDVNSSNGYLGRKGRDEFVLERNRSARYSPTNSMDNGGLLRLYLTPSGRRNGASKGRSNQAHSIARSVLRLY