Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26465.t1 | XP_003607925.1 | 91.6 | 845 | 71 | 0 | 1 | 845 | 1 | 845 | 0.00E+00 | 1333.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26465.t1 | Q9SLN1 | 29.9 | 736 | 437 | 15 | 1 | 696 | 1 | 697 | 9.2e-68 | 260.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26465.t1 | G7JK12 | 91.6 | 845 | 71 | 0 | 1 | 845 | 1 | 845 | 0.0e+00 | 1333.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene26465 | 0.825896 | 3.65E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene26465 | 0.808408 | 3.14E-50 | -1.69E-46 |
| MS.gene049418 | MS.gene26465 | 0.820182 | 7.85E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene26465 | 0.821985 | 3.02E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene26465 | 0.838417 | 2.91E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene26465 | 0.812475 | 4.16E-51 | -1.69E-46 |
| MS.gene050310 | MS.gene26465 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene051018 | MS.gene26465 | 0.821438 | 4.04E-53 | -1.69E-46 |
| MS.gene051067 | MS.gene26465 | 0.83854 | 2.71E-57 | -1.69E-46 |
| MS.gene051478 | MS.gene26465 | 0.81611 | 6.55E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene26465 | 0.870441 | 1.46E-66 | -1.69E-46 |
| MS.gene051660 | MS.gene26465 | 0.835751 | 1.40E-56 | -1.69E-46 |
| MS.gene051664 | MS.gene26465 | 0.816799 | 4.59E-52 | -1.69E-46 |
| MS.gene052000 | MS.gene26465 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene052150 | MS.gene26465 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene052151 | MS.gene26465 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene26465 | -0.817521 | 3.16E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene26465 | 0.862846 | 3.79E-64 | -1.69E-46 |
| MS.gene053536 | MS.gene26465 | 0.972951 | 1.30E-135 | -1.69E-46 |
| MS.gene053538 | MS.gene26465 | 0.974699 | 1.28E-138 | -1.69E-46 |
| MS.gene053540 | MS.gene26465 | 0.85476 | 9.93E-62 | -1.69E-46 |
| MS.gene053945 | MS.gene26465 | 0.834678 | 2.61E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene26465 | 0.845382 | 4.21E-59 | -1.69E-46 |
| MS.gene054999 | MS.gene26465 | 0.811402 | 7.13E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene26465 | 0.857651 | 1.41E-62 | -1.69E-46 |
| MS.gene055580 | MS.gene26465 | -0.812783 | 3.56E-51 | -1.69E-46 |
| MS.gene055764 | MS.gene26465 | 0.878882 | 1.96E-69 | -1.69E-46 |
| MS.gene056169 | MS.gene26465 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene057082 | MS.gene26465 | 0.825681 | 4.11E-54 | -1.69E-46 |
| MS.gene05894 | MS.gene26465 | 0.870262 | 1.67E-66 | -1.69E-46 |
| MS.gene059300 | MS.gene26465 | 0.803916 | 2.77E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene26465 | 0.963391 | 5.00E-122 | -1.69E-46 |
| MS.gene059425 | MS.gene26465 | 0.854782 | 9.79E-62 | -1.69E-46 |
| MS.gene059426 | MS.gene26465 | 0.845465 | 3.99E-59 | -1.69E-46 |
| MS.gene05970 | MS.gene26465 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene05971 | MS.gene26465 | 0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene26465 | 0.824823 | 6.55E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26465.t1 | MTR_4g085570 | 93.491 | 845 | 55 | 0 | 1 | 845 | 1 | 845 | 0.0 | 1627 |
| MS.gene26465.t1 | MTR_4g085570 | 93.491 | 845 | 55 | 0 | 1 | 845 | 1 | 845 | 0.0 | 1622 |
| MS.gene26465.t1 | MTR_4g094848 | 34.093 | 921 | 489 | 18 | 1 | 831 | 1 | 893 | 6.87e-115 | 375 |
| MS.gene26465.t1 | MTR_4g094848 | 35.000 | 800 | 440 | 14 | 93 | 831 | 1 | 781 | 2.18e-108 | 355 |
| MS.gene26465.t1 | MTR_3g113290 | 31.053 | 380 | 240 | 8 | 73 | 436 | 148 | 521 | 5.63e-34 | 141 |
| MS.gene26465.t1 | MTR_1g024095 | 28.684 | 509 | 287 | 12 | 6 | 442 | 5 | 509 | 5.72e-30 | 128 |
| MS.gene26465.t1 | MTR_1g024095 | 28.684 | 509 | 287 | 12 | 6 | 442 | 5 | 509 | 6.59e-30 | 128 |
| MS.gene26465.t1 | MTR_5g016830 | 26.354 | 554 | 297 | 18 | 309 | 835 | 219 | 688 | 1.03e-29 | 127 |
| MS.gene26465.t1 | MTR_5g016830 | 31.667 | 240 | 131 | 6 | 1 | 210 | 1 | 237 | 3.65e-16 | 83.6 |
| MS.gene26465.t1 | MTR_5g021810 | 28.723 | 376 | 233 | 6 | 73 | 436 | 130 | 482 | 1.10e-21 | 101 |
| MS.gene26465.t1 | MTR_5g021810 | 28.723 | 376 | 233 | 6 | 73 | 436 | 129 | 481 | 1.24e-21 | 101 |
| MS.gene26465.t1 | MTR_8g094760 | 34.969 | 163 | 81 | 3 | 82 | 243 | 123 | 261 | 3.61e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26465.t1 | AT2G23360 | 30.892 | 751 | 410 | 19 | 1 | 696 | 1 | 697 | 6.80e-74 | 260 |
| MS.gene26465.t1 | AT3G19370 | 29.795 | 537 | 246 | 17 | 1 | 513 | 1 | 430 | 2.60e-39 | 156 |
| MS.gene26465.t1 | AT3G19370 | 46.667 | 105 | 55 | 1 | 729 | 833 | 480 | 583 | 2.07e-17 | 87.4 |
| MS.gene26465.t1 | AT3G19370 | 29.795 | 537 | 246 | 17 | 1 | 513 | 1 | 430 | 2.60e-39 | 156 |
| MS.gene26465.t1 | AT3G19370 | 46.667 | 105 | 55 | 1 | 729 | 833 | 480 | 583 | 2.07e-17 | 87.4 |
| MS.gene26465.t1 | AT3G19370 | 29.795 | 537 | 246 | 17 | 1 | 513 | 1 | 430 | 2.60e-39 | 156 |
| MS.gene26465.t1 | AT3G19370 | 46.667 | 105 | 55 | 1 | 729 | 833 | 480 | 583 | 2.07e-17 | 87.4 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G19835 | 28.273 | 527 | 294 | 14 | 1 | 455 | 1 | 515 | 5.46e-34 | 141 |
| MS.gene26465.t1 | AT1G47900 | 29.275 | 386 | 236 | 6 | 111 | 464 | 192 | 572 | 8.47e-29 | 124 |
| MS.gene26465.t1 | AT1G47900 | 29.275 | 386 | 236 | 6 | 111 | 464 | 192 | 572 | 9.25e-29 | 124 |
| MS.gene26465.t1 | AT1G47900 | 29.275 | 386 | 236 | 6 | 111 | 464 | 192 | 572 | 9.25e-29 | 124 |
| MS.gene26465.t1 | AT4G36120 | 26.902 | 368 | 255 | 5 | 73 | 428 | 129 | 494 | 1.08e-25 | 114 |
| MS.gene26465.t1 | AT4G36120 | 26.902 | 368 | 255 | 5 | 73 | 428 | 129 | 494 | 1.08e-25 | 114 |
Find 129 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAGTAATCTTTGGATTT+AGG | 0.164446 | 4.3:+27267608 | None:intergenic |
| GGACCATTGTTGCAGATAAA+TGG | 0.241008 | 4.3:+27267680 | None:intergenic |
| GAAAGAAGCTAAATCCTAAT+AGG | 0.269721 | 4.3:-27268558 | MS.gene26465:CDS |
| TTGTAAAGCATGTCCCTATT+AGG | 0.272328 | 4.3:+27268544 | None:intergenic |
| AAAAGATCTCCTGGTCTTGC+AGG | 0.287322 | 4.3:-27268637 | MS.gene26465:CDS |
| GATCAAACATATACAGGATA+TGG | 0.287467 | 4.3:-27268467 | MS.gene26465:CDS |
| AACATGAACAAAGTAATCTT+TGG | 0.287719 | 4.3:+27267601 | None:intergenic |
| TCATCAAGCCGATACTCTTC+TGG | 0.292806 | 4.3:+27268488 | None:intergenic |
| CTGCTCTTCAACCATGGCTT+TGG | 0.293744 | 4.3:+27267088 | None:intergenic |
| ACATGTGAAACTCATATCTT+AGG | 0.305333 | 4.3:+27268803 | None:intergenic |
| TCTTCTTCAACACAGCTTAG+AGG | 0.308629 | 4.3:+27269081 | None:intergenic |
| GTGAATAGGAAGAATGAAAT+TGG | 0.309218 | 4.3:-27268610 | MS.gene26465:CDS |
| GATGATGAGGCTATCTCTTC+TGG | 0.311197 | 4.3:-27268232 | MS.gene26465:CDS |
| CAAATCAACACCAATTTGAT+TGG | 0.312196 | 4.3:-27267949 | MS.gene26465:CDS |
| CAATGAGCTTGATAATTCTA+TGG | 0.316924 | 4.3:+27267720 | None:intergenic |
| CTGGGCAAATGCTCTTATTT+CGG | 0.322833 | 4.3:-27268206 | MS.gene26465:CDS |
| AGTTTCAGCAGACACTTCTT+TGG | 0.327000 | 4.3:+27269143 | None:intergenic |
| CAATCTGAAGCCAATCAAAT+TGG | 0.327825 | 4.3:+27267939 | None:intergenic |
| CTTCTTGTTTACATCTTACT+AGG | 0.332606 | 4.3:+27268887 | None:intergenic |
| GTACATGTCCTGAGCTTCTA+TGG | 0.340264 | 4.3:+27268132 | None:intergenic |
| AGGCTATCTCTTCTGGATCC+TGG | 0.342477 | 4.3:-27268225 | MS.gene26465:CDS |
| CTCTCCAAAGAGGAATCTAT+TGG | 0.349267 | 4.3:-27268913 | MS.gene26465:CDS |
| AGATGTTATTTAACTTTGCC+TGG | 0.349712 | 4.3:+27267012 | None:intergenic |
| TGTTTCGGAGGCTAAAATTC+AGG | 0.351476 | 4.3:-27268167 | MS.gene26465:CDS |
| ACTTGAACATTTACGTGTTT+CGG | 0.357826 | 4.3:-27268182 | MS.gene26465:CDS |
| CGAGGAAGTTGCATTTGCTT+TGG | 0.363685 | 4.3:-27267480 | MS.gene26465:CDS |
| CCTTGCCATTGATGCATTTG+TGG | 0.366291 | 4.3:+27267430 | None:intergenic |
| TAGCATCACAAGTTTCGAAT+TGG | 0.366961 | 4.3:-27267132 | MS.gene26465:CDS |
| ATAAGTCTGAAACTGAATTC+TGG | 0.376949 | 4.3:+27267639 | None:intergenic |
| TGAGAAGATTCAGAAAGAAT+TGG | 0.379364 | 4.3:-27269010 | MS.gene26465:CDS |
| GTCCCCAATAGATTCCTCTT+TGG | 0.385065 | 4.3:+27268909 | None:intergenic |
| ACTTCACATCTGCCATTTGT+TGG | 0.392167 | 4.3:+27266756 | None:intergenic |
| AGCTCAGGACATGTACTCTA+TGG | 0.392566 | 4.3:-27268125 | MS.gene26465:CDS |
| TGACCTTGGTGAGACAAATC+AGG | 0.409256 | 4.3:-27267993 | MS.gene26465:CDS |
| ATTTCATTCTTCCTATTCAC+TGG | 0.410631 | 4.3:+27268613 | None:intergenic |
| CATTGATGCATTTGTGGAGT+TGG | 0.410907 | 4.3:+27267436 | None:intergenic |
| AAAGAAGCTAAATCCTAATA+GGG | 0.411652 | 4.3:-27268557 | MS.gene26465:CDS |
| TCAGACAAGTATCCTTCTTT+CGG | 0.418317 | 4.3:+27268055 | None:intergenic |
| AGGTCAAAATCTTGTTCAAT+TGG | 0.421045 | 4.3:+27268010 | None:intergenic |
| TCCTACAGATGAAACATTGC+AGG | 0.421971 | 4.3:-27269115 | MS.gene26465:CDS |
| CTTGATGATCAAACATATAC+AGG | 0.424199 | 4.3:-27268473 | MS.gene26465:CDS |
| TCTCCAAAGAGGAATCTATT+GGG | 0.425490 | 4.3:-27268912 | MS.gene26465:CDS |
| TGCCAACAGCATTGCAAAGA+AGG | 0.425740 | 4.3:-27266784 | MS.gene26465:intron |
| CTCTCACCGGACTTATCATC+TGG | 0.430602 | 4.3:+27267302 | None:intergenic |
| TTCAATGATTTGAGAAGGAC+TGG | 0.431507 | 4.3:+27269495 | None:intergenic |
| TCTTGAGCTTCAACTTCAGT+TGG | 0.432549 | 4.3:-27266916 | MS.gene26465:CDS |
| TTCAATCTGCTCTTCAACCA+TGG | 0.435146 | 4.3:+27267082 | None:intergenic |
| ATGTCAAAATTTGACATTGA+AGG | 0.437532 | 4.3:+27268262 | None:intergenic |
| TGGTTCTCCTCTAAGCAATC+TGG | 0.438639 | 4.3:+27267659 | None:intergenic |
| GTCCTCATTGATTCTCCTGT+TGG | 0.449643 | 4.3:-27269189 | MS.gene26465:CDS |
| AGAATTATCAAGCTCATTGA+AGG | 0.449959 | 4.3:-27267716 | MS.gene26465:CDS |
| GAAGGAAGTTCATTTGATGT+AGG | 0.454421 | 4.3:+27268280 | None:intergenic |
| GTCATTAGAATTTGAGTTGG+AGG | 0.455095 | 4.3:-27266976 | MS.gene26465:CDS |
| CAACTCCACAAATGCATCAA+TGG | 0.455154 | 4.3:-27267435 | MS.gene26465:CDS |
| GGCTATCTCTTCTGGATCCT+GGG | 0.459636 | 4.3:-27268224 | MS.gene26465:CDS |
| CAATGGTCCAGATTGCTTAG+AGG | 0.461387 | 4.3:-27267666 | MS.gene26465:CDS |
| AAGTTGCATTTGCTTTGGAC+TGG | 0.461839 | 4.3:-27267475 | MS.gene26465:CDS |
| TTGTTGCAGATAAATGGCTT+TGG | 0.464343 | 4.3:+27267686 | None:intergenic |
| GATTCTTCAAGATTTATGTA+TGG | 0.466740 | 4.3:-27268391 | MS.gene26465:CDS |
| TAATCTTTGGATTTAGGTGA+TGG | 0.468399 | 4.3:+27267614 | None:intergenic |
| AAGATATGAGTTTCACATGT+TGG | 0.471283 | 4.3:-27268800 | MS.gene26465:CDS |
| CATCAAGCCGATACTCTTCT+GGG | 0.472421 | 4.3:+27268489 | None:intergenic |
| CAATAAAGCCATAGAAGCTC+AGG | 0.475405 | 4.3:-27268140 | MS.gene26465:CDS |
| TTCTGAAAATTACAAGTCCA+TGG | 0.477001 | 4.3:-27268320 | MS.gene26465:CDS |
| GTCTTGCAGGTCCAGTGAAT+AGG | 0.487275 | 4.3:-27268624 | MS.gene26465:CDS |
| AAGGTTAGATTCCACAGAAA+AGG | 0.487764 | 4.3:-27268836 | MS.gene26465:CDS |
| AATCTCAGCCTGTGACAACC+TGG | 0.488184 | 4.3:+27268357 | None:intergenic |
| AAGAAGGAATCTCCAACAAA+TGG | 0.494663 | 4.3:-27266768 | MS.gene26465:CDS |
| ATCACAAGCCATGGCATTGG+AGG | 0.496530 | 4.3:-27269561 | MS.gene26465:CDS |
| TCTGTTAATACACCGAAAGA+AGG | 0.498028 | 4.3:-27268067 | MS.gene26465:CDS |
| AAAATCTGCTAAGGAAGACT+TGG | 0.499892 | 4.3:-27267222 | MS.gene26465:CDS |
| AGCTTCAACTTCAGTTGGAA+AGG | 0.508715 | 4.3:-27266911 | MS.gene26465:intron |
| CTTTCAACAGATAAGGAAAG+TGG | 0.514488 | 4.3:-27269255 | MS.gene26465:CDS |
| TCAAGTCTGAAACCTTCCAT+TGG | 0.517758 | 4.3:+27267576 | None:intergenic |
| GAGAAGTCTAAACGAGAAGT+TGG | 0.518791 | 4.3:-27269217 | MS.gene26465:CDS |
| TTCGTCATTAGAATTTGAGT+TGG | 0.520970 | 4.3:-27266979 | MS.gene26465:CDS |
| GGATACTTGTCTGATGTAAG+TGG | 0.524220 | 4.3:-27268046 | MS.gene26465:CDS |
| TGAATCACAAGCCATGGCAT+TGG | 0.526460 | 4.3:-27269564 | MS.gene26465:CDS |
| GAGGAATACAAAATCTGCTA+AGG | 0.530722 | 4.3:-27267231 | MS.gene26465:CDS |
| GATGTTATTTAACTTTGCCT+GGG | 0.533839 | 4.3:+27267013 | None:intergenic |
| TCCTGCAATGTTTCATCTGT+AGG | 0.538907 | 4.3:+27269114 | None:intergenic |
| AACAGCATCCAGGTTGTCAC+AGG | 0.541203 | 4.3:-27268365 | MS.gene26465:CDS |
| ACTCAAAAGTCAATGCATCA+TGG | 0.543731 | 4.3:-27267794 | MS.gene26465:CDS |
| ACACGATCTTTCAACAGATA+AGG | 0.544615 | 4.3:-27269262 | MS.gene26465:CDS |
| AAGCCATTTATCTGCAACAA+TGG | 0.546251 | 4.3:-27267683 | MS.gene26465:CDS |
| TGACATTTCTAGTGATGATG+AGG | 0.554232 | 4.3:-27268245 | MS.gene26465:CDS |
| TGAACAAGTTGATGCAAAAG+TGG | 0.555671 | 4.3:+27267551 | None:intergenic |
| TTCACTGGACCTGCAAGACC+AGG | 0.555921 | 4.3:+27268628 | None:intergenic |
| AACAAATGGCAGATGTGAAG+TGG | 0.557612 | 4.3:-27266754 | MS.gene26465:CDS |
| TGAGTTTCACATGTTGGAGA+AGG | 0.560544 | 4.3:-27268794 | MS.gene26465:CDS |
| CAAAGCAAATGCAACTTCCT+CGG | 0.561491 | 4.3:+27267481 | None:intergenic |
| CCACAAATGCATCAATGGCA+AGG | 0.563550 | 4.3:-27267430 | MS.gene26465:CDS |
| ACAAGTCCATGGAGCTAGCA+AGG | 0.566040 | 4.3:-27268309 | MS.gene26465:CDS |
| CGAGTATCCCAGAAGAGTAT+CGG | 0.566639 | 4.3:-27268496 | MS.gene26465:CDS |
| GCATATCCAGATGATAAGTC+CGG | 0.568294 | 4.3:-27267308 | MS.gene26465:CDS |
| TAATGCTTTGCTCTCCAAAG+AGG | 0.568551 | 4.3:-27268923 | MS.gene26465:CDS |
| ACATATACAGGATATGGATG+AGG | 0.569404 | 4.3:-27268461 | MS.gene26465:CDS |
| TGTATGGTGAAACAGCATCC+AGG | 0.570417 | 4.3:-27268375 | MS.gene26465:CDS |
| GATACTTGTCTGATGTAAGT+GGG | 0.571105 | 4.3:-27268045 | MS.gene26465:CDS |
| GAAAATTAAAAGATGATCTG+AGG | 0.571396 | 4.3:-27267250 | MS.gene26465:CDS |
| ATAACACCTTGCTAGCTCCA+TGG | 0.573593 | 4.3:+27268303 | None:intergenic |
| AAATCATGAATCACAAGCCA+TGG | 0.580266 | 4.3:-27269570 | None:intergenic |
| CGAAATAAGAGCATTTGCCC+AGG | 0.583249 | 4.3:+27268207 | None:intergenic |
| ACACAGCTTAGAGGCTGCAA+AGG | 0.587987 | 4.3:+27269090 | None:intergenic |
| TCATCTGGATATGCAACTGA+AGG | 0.589538 | 4.3:+27267317 | None:intergenic |
| TGGTGAGACAAATCAGGAGA+TGG | 0.590809 | 4.3:-27267987 | MS.gene26465:CDS |
| TGAGATACGAAAGGAGGAGA+TGG | 0.598393 | 4.3:-27268767 | MS.gene26465:CDS |
| ATTGAAAGAATCCAAAGCCA+TGG | 0.602912 | 4.3:-27267099 | MS.gene26465:CDS |
| GGAACGGTGAGAAAAGAGAC+AGG | 0.607224 | 4.3:-27268589 | MS.gene26465:CDS |
| CACAAATGCATCAATGGCAA+GGG | 0.609965 | 4.3:-27267429 | MS.gene26465:CDS |
| TGAACATTTACGTGTTTCGG+AGG | 0.617084 | 4.3:-27268179 | MS.gene26465:CDS |
| TAGGAAGAATGAAATTGGAA+CGG | 0.620367 | 4.3:-27268605 | MS.gene26465:CDS |
| CACACAACTTACAATAGCCC+AGG | 0.622098 | 4.3:-27267030 | MS.gene26465:CDS |
| CTCCAAAGAGGAATCTATTG+GGG | 0.623459 | 4.3:-27268911 | MS.gene26465:CDS |
| GGATATGGATGAGGAAAACA+AGG | 0.627279 | 4.3:-27268452 | MS.gene26465:CDS |
| AGTTTAAGACTCTGATGACA+AGG | 0.628274 | 4.3:-27268855 | MS.gene26465:CDS |
| GTCATGCTGATTACTCTCAC+CGG | 0.628866 | 4.3:+27267289 | None:intergenic |
| CTTGTCTGATGTAAGTGGGA+GGG | 0.633717 | 4.3:-27268041 | MS.gene26465:CDS |
| GGTGAGAAAAGAGACAGGTA+TGG | 0.641333 | 4.3:-27268584 | MS.gene26465:CDS |
| GTGATGCATCTGCATACTGA+CGG | 0.648407 | 4.3:+27268737 | None:intergenic |
| GAAGGAACTTGAGATACGAA+AGG | 0.655634 | 4.3:-27268776 | MS.gene26465:CDS |
| ACTTGTCTGATGTAAGTGGG+AGG | 0.659831 | 4.3:-27268042 | MS.gene26465:CDS |
| CTCCAACAGGAGAATCAATG+AGG | 0.661990 | 4.3:+27269187 | None:intergenic |
| ATATTTGGAATGATAACGCA+CGG | 0.662032 | 4.3:+27269045 | None:intergenic |
| TATGCGTTTCTCCTTCAACA+TGG | 0.665654 | 4.3:+27267907 | None:intergenic |
| GGAACTTGAGATACGAAAGG+AGG | 0.667469 | 4.3:-27268773 | MS.gene26465:CDS |
| TCTCCTGATTTGTCTCACCA+AGG | 0.680783 | 4.3:+27267990 | None:intergenic |
| GAAACGGAGTCTCTGACACT+CGG | 0.691954 | 4.3:+27268669 | None:intergenic |
| GATATGCAACTGAAGGTGTG+CGG | 0.755785 | 4.3:+27267324 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTACAAAAATAATGATGT+TGG | - | chr4.3:27267773-27267792 | MS.gene26465:CDS | 20.0% |
| !! | TTTCATGTTAAAAATTTCAG+TGG | - | chr4.3:27268544-27268563 | MS.gene26465:CDS | 20.0% |
| !!! | TCATGATCTTTTGATATATT+TGG | + | chr4.3:27267275-27267294 | None:intergenic | 20.0% |
| ! | AAAGAAGCTAAATCCTAATA+GGG | - | chr4.3:27267745-27267764 | MS.gene26465:CDS | 25.0% |
| ! | AACATGAACAAAGTAATCTT+TGG | + | chr4.3:27268704-27268723 | None:intergenic | 25.0% |
| ! | AAGCAAAAGAAAATTGCAAA+AGG | + | chr4.3:27269468-27269487 | None:intergenic | 25.0% |
| ! | ACAAAGTAATCTTTGGATTT+AGG | + | chr4.3:27268697-27268716 | None:intergenic | 25.0% |
| ! | ATGTCAAAATTTGACATTGA+AGG | + | chr4.3:27268043-27268062 | None:intergenic | 25.0% |
| ! | CAAAACTTAGAAGAGAATAA+TGG | + | chr4.3:27266920-27266939 | None:intergenic | 25.0% |
| ! | CTAACAATACTACATTTATC+AGG | - | chr4.3:27267016-27267035 | MS.gene26465:CDS | 25.0% |
| ! | GAAAATTAAAAGATGATCTG+AGG | - | chr4.3:27269052-27269071 | MS.gene26465:CDS | 25.0% |
| ! | GATTCTTCAAGATTTATGTA+TGG | - | chr4.3:27267911-27267930 | MS.gene26465:CDS | 25.0% |
| ! | TTCTCAAATCATTGAAAAAG+AGG | - | chr4.3:27266814-27266833 | MS.gene26465:intron | 25.0% |
| !!! | ATCTTTTTTGAATCACGAAA+CGG | + | chr4.3:27267652-27267671 | None:intergenic | 25.0% |
| !!! | TCTTTTTCAATGATTTGAGA+AGG | + | chr4.3:27266815-27266834 | None:intergenic | 25.0% |
| AAGATATGAGTTTCACATGT+TGG | - | chr4.3:27267502-27267521 | MS.gene26465:CDS | 30.0% | |
| ACATGTGAAACTCATATCTT+AGG | + | chr4.3:27267502-27267521 | None:intergenic | 30.0% | |
| ACCTGCAAAAATTTACTAAC+AGG | - | chr4.3:27268775-27268794 | MS.gene26465:CDS | 30.0% | |
| ACTTGAACATTTACGTGTTT+CGG | - | chr4.3:27268120-27268139 | MS.gene26465:CDS | 30.0% | |
| AGAATTATCAAGCTCATTGA+AGG | - | chr4.3:27268586-27268605 | MS.gene26465:CDS | 30.0% | |
| AGGTCAAAATCTTGTTCAAT+TGG | + | chr4.3:27268295-27268314 | None:intergenic | 30.0% | |
| ATAATGGCTCAATATGTTTC+TGG | + | chr4.3:27266904-27266923 | None:intergenic | 30.0% | |
| ATTTCATTCTTCCTATTCAC+TGG | + | chr4.3:27267692-27267711 | None:intergenic | 30.0% | |
| CAAATCAACACCAATTTGAT+TGG | - | chr4.3:27268353-27268372 | MS.gene26465:CDS | 30.0% | |
| GAAAGAAGCTAAATCCTAAT+AGG | - | chr4.3:27267744-27267763 | MS.gene26465:CDS | 30.0% | |
| GATCAAACATATACAGGATA+TGG | - | chr4.3:27267835-27267854 | MS.gene26465:CDS | 30.0% | |
| GATGACATAAAAATCGCATT+CGG | - | chr4.3:27268445-27268464 | MS.gene26465:CDS | 30.0% | |
| GTGAATAGGAAGAATGAAAT+TGG | - | chr4.3:27267692-27267711 | MS.gene26465:CDS | 30.0% | |
| TAATCTTTGGATTTAGGTGA+TGG | + | chr4.3:27268691-27268710 | None:intergenic | 30.0% | |
| TAGGAAGAATGAAATTGGAA+CGG | - | chr4.3:27267697-27267716 | MS.gene26465:CDS | 30.0% | |
| TGAGAAGATTCAGAAAGAAT+TGG | - | chr4.3:27267292-27267311 | MS.gene26465:CDS | 30.0% | |
| TTCGTCATTAGAATTTGAGT+TGG | - | chr4.3:27269323-27269342 | MS.gene26465:intron | 30.0% | |
| ! | ACCTGTTAGTAAATTTTTGC+AGG | + | chr4.3:27268779-27268798 | None:intergenic | 30.0% |
| ! | ACTTTGTTCATGTTTTCCAA+TGG | - | chr4.3:27268710-27268729 | MS.gene26465:CDS | 30.0% |
| ! | AGATGTTATTTAACTTTGCC+TGG | + | chr4.3:27269293-27269312 | None:intergenic | 30.0% |
| ! | ATAAGTCTGAAACTGAATTC+TGG | + | chr4.3:27268666-27268685 | None:intergenic | 30.0% |
| ! | ATATTTGGAATGATAACGCA+CGG | + | chr4.3:27267260-27267279 | None:intergenic | 30.0% |
| ! | ATTTTGTTGAGATGGAGAAA+AGG | - | chr4.3:27268203-27268222 | MS.gene26465:CDS | 30.0% |
| ! | CAATGAGCTTGATAATTCTA+TGG | + | chr4.3:27268585-27268604 | None:intergenic | 30.0% |
| ! | CTTCTTGTTTACATCTTACT+AGG | + | chr4.3:27267418-27267437 | None:intergenic | 30.0% |
| ! | CTTGATGATCAAACATATAC+AGG | - | chr4.3:27267829-27267848 | MS.gene26465:CDS | 30.0% |
| ! | GATGTTATTTAACTTTGCCT+GGG | + | chr4.3:27269292-27269311 | None:intergenic | 30.0% |
| ! | TATGGATGATTTTGTTGAGA+TGG | - | chr4.3:27268195-27268214 | MS.gene26465:CDS | 30.0% |
| ! | TTCTGAAAATTACAAGTCCA+TGG | - | chr4.3:27267982-27268001 | MS.gene26465:CDS | 30.0% |
| ! | TTTTGTTGAGATGGAGAAAA+GGG | - | chr4.3:27268204-27268223 | MS.gene26465:CDS | 30.0% |
| !! | ATTGAACAAGATTTTGACCT+TGG | - | chr4.3:27268295-27268314 | MS.gene26465:CDS | 30.0% |
| !! | GCAATTTTCTTTTGCTTTTC+TGG | - | chr4.3:27269471-27269490 | MS.gene26465:intron | 30.0% |
| !! | TGATTTTGAAAATTTTGCCG+AGG | - | chr4.3:27268804-27268823 | MS.gene26465:CDS | 30.0% |
| AAAAGGCTAGAAACCGAAAA+GGG | + | chr4.3:27269451-27269470 | None:intergenic | 35.0% | |
| AAAATCTGCTAAGGAAGACT+TGG | - | chr4.3:27269080-27269099 | MS.gene26465:CDS | 35.0% | |
| AAGAAGGAATCTCCAACAAA+TGG | - | chr4.3:27269534-27269553 | MS.gene26465:CDS | 35.0% | |
| AAGCCATTTATCTGCAACAA+TGG | - | chr4.3:27268619-27268638 | MS.gene26465:CDS | 35.0% | |
| AAGGTTAGATTCCACAGAAA+AGG | - | chr4.3:27267466-27267485 | MS.gene26465:CDS | 35.0% | |
| ACACGATCTTTCAACAGATA+AGG | - | chr4.3:27267040-27267059 | MS.gene26465:CDS | 35.0% | |
| ACATATACAGGATATGGATG+AGG | - | chr4.3:27267841-27267860 | MS.gene26465:CDS | 35.0% | |
| ACTCAAAAGTCAATGCATCA+TGG | - | chr4.3:27268508-27268527 | MS.gene26465:CDS | 35.0% | |
| ATTGAAAGAATCCAAAGCCA+TGG | - | chr4.3:27269203-27269222 | MS.gene26465:CDS | 35.0% | |
| CTTTCAACAGATAAGGAAAG+TGG | - | chr4.3:27267047-27267066 | MS.gene26465:CDS | 35.0% | |
| GAAGGAAGTTCATTTGATGT+AGG | + | chr4.3:27268025-27268044 | None:intergenic | 35.0% | |
| GAGGAATACAAAATCTGCTA+AGG | - | chr4.3:27269071-27269090 | MS.gene26465:CDS | 35.0% | |
| GATACTTGTCTGATGTAAGT+GGG | - | chr4.3:27268257-27268276 | MS.gene26465:CDS | 35.0% | |
| GTGATTCAAAAAAGATCTCC+TGG | - | chr4.3:27267656-27267675 | MS.gene26465:CDS | 35.0% | |
| TAGCATCACAAGTTTCGAAT+TGG | - | chr4.3:27269170-27269189 | MS.gene26465:CDS | 35.0% | |
| TCAGACAAGTATCCTTCTTT+CGG | + | chr4.3:27268250-27268269 | None:intergenic | 35.0% | |
| TCTCCAAAGAGGAATCTATT+GGG | - | chr4.3:27267390-27267409 | MS.gene26465:CDS | 35.0% | |
| TCTGTTAATACACCGAAAGA+AGG | - | chr4.3:27268235-27268254 | MS.gene26465:CDS | 35.0% | |
| TTCAATGATTTGAGAAGGAC+TGG | + | chr4.3:27266810-27266829 | None:intergenic | 35.0% | |
| TTGTAAAGCATGTCCCTATT+AGG | + | chr4.3:27267761-27267780 | None:intergenic | 35.0% | |
| TTGTTGCAGATAAATGGCTT+TGG | + | chr4.3:27268619-27268638 | None:intergenic | 35.0% | |
| ! | AGTTTAAGACTCTGATGACA+AGG | - | chr4.3:27267447-27267466 | MS.gene26465:CDS | 35.0% |
| ! | CAATCTGAAGCCAATCAAAT+TGG | + | chr4.3:27268366-27268385 | None:intergenic | 35.0% |
| ! | TCATCAGATTTTACTCCAAC+AGG | + | chr4.3:27267131-27267150 | None:intergenic | 35.0% |
| ! | TGTTCATGTTTTCCAATGGA+AGG | - | chr4.3:27268714-27268733 | MS.gene26465:CDS | 35.0% |
| !! | CTAGTGAATTCAGCTCTAAA+AGG | + | chr4.3:27266969-27266988 | None:intergenic | 35.0% |
| !! | GTCATTAGAATTTGAGTTGG+AGG | - | chr4.3:27269326-27269345 | MS.gene26465:intron | 35.0% |
| !! | TGAACAAGTTGATGCAAAAG+TGG | + | chr4.3:27268754-27268773 | None:intergenic | 35.0% |
| !! | TGACATTTCTAGTGATGATG+AGG | - | chr4.3:27268057-27268076 | MS.gene26465:CDS | 35.0% |
| !! | TGTTTTGAATGCCATGTTGA+AGG | - | chr4.3:27268384-27268403 | MS.gene26465:CDS | 35.0% |
| AACAAATGGCAGATGTGAAG+TGG | - | chr4.3:27269548-27269567 | MS.gene26465:CDS | 40.0% | |
| AGCTTCAACTTCAGTTGGAA+AGG | - | chr4.3:27269391-27269410 | MS.gene26465:intron | 40.0% | |
| AGTTTCAGCAGACACTTCTT+TGG | + | chr4.3:27267162-27267181 | None:intergenic | 40.0% | |
| CAAAAGGCTAGAAACCGAAA+AGG | + | chr4.3:27269452-27269471 | None:intergenic | 40.0% | |
| CAAAGCAAATGCAACTTCCT+CGG | + | chr4.3:27268824-27268843 | None:intergenic | 40.0% | |
| CAACTCCACAAATGCATCAA+TGG | - | chr4.3:27268867-27268886 | MS.gene26465:CDS | 40.0% | |
| CAATAAAGCCATAGAAGCTC+AGG | - | chr4.3:27268162-27268181 | MS.gene26465:CDS | 40.0% | |
| CACAAATGCATCAATGGCAA+GGG | - | chr4.3:27268873-27268892 | MS.gene26465:CDS | 40.0% | |
| CATTGATGCATTTGTGGAGT+TGG | + | chr4.3:27268869-27268888 | None:intergenic | 40.0% | |
| CTCCAAAGAGGAATCTATTG+GGG | - | chr4.3:27267391-27267410 | MS.gene26465:CDS | 40.0% | |
| CTCTCCAAAGAGGAATCTAT+TGG | - | chr4.3:27267389-27267408 | MS.gene26465:CDS | 40.0% | |
| CTTCAGTTGGAAAGGTAAAC+AGG | - | chr4.3:27269399-27269418 | MS.gene26465:intron | 40.0% | |
| GAAGGAACTTGAGATACGAA+AGG | - | chr4.3:27267526-27267545 | MS.gene26465:CDS | 40.0% | |
| GAGAAGTCTAAACGAGAAGT+TGG | - | chr4.3:27267085-27267104 | MS.gene26465:CDS | 40.0% | |
| GCATATCCAGATGATAAGTC+CGG | - | chr4.3:27268994-27269013 | MS.gene26465:CDS | 40.0% | |
| GGACCATTGTTGCAGATAAA+TGG | + | chr4.3:27268625-27268644 | None:intergenic | 40.0% | |
| GGATACTTGTCTGATGTAAG+TGG | - | chr4.3:27268256-27268275 | MS.gene26465:CDS | 40.0% | |
| GGATATGGATGAGGAAAACA+AGG | - | chr4.3:27267850-27267869 | MS.gene26465:CDS | 40.0% | |
| TAATGCTTTGCTCTCCAAAG+AGG | - | chr4.3:27267379-27267398 | MS.gene26465:CDS | 40.0% | |
| TAGAAACCGAAAAGGGAGAA+GGG | + | chr4.3:27269444-27269463 | None:intergenic | 40.0% | |
| TATGCGTTTCTCCTTCAACA+TGG | + | chr4.3:27268398-27268417 | None:intergenic | 40.0% | |
| TCATCTGGATATGCAACTGA+AGG | + | chr4.3:27268988-27269007 | None:intergenic | 40.0% | |
| TCCTACAGATGAAACATTGC+AGG | - | chr4.3:27267187-27267206 | MS.gene26465:CDS | 40.0% | |
| TCCTGCAATGTTTCATCTGT+AGG | + | chr4.3:27267191-27267210 | None:intergenic | 40.0% | |
| TCTTCTTCAACACAGCTTAG+AGG | + | chr4.3:27267224-27267243 | None:intergenic | 40.0% | |
| TCTTGAGCTTCAACTTCAGT+TGG | - | chr4.3:27269386-27269405 | MS.gene26465:intron | 40.0% | |
| TGAACATTTACGTGTTTCGG+AGG | - | chr4.3:27268123-27268142 | MS.gene26465:CDS | 40.0% | |
| TGAGTTTCACATGTTGGAGA+AGG | - | chr4.3:27267508-27267527 | MS.gene26465:CDS | 40.0% | |
| TGTTTCGGAGGCTAAAATTC+AGG | - | chr4.3:27268135-27268154 | MS.gene26465:CDS | 40.0% | |
| TTCAATCTGCTCTTCAACCA+TGG | + | chr4.3:27269223-27269242 | None:intergenic | 40.0% | |
| TTCCTTCTTTGCAATGCTGT+TGG | + | chr4.3:27269523-27269542 | None:intergenic | 40.0% | |
| ! | AAGTTGCATTTGCTTTGGAC+TGG | - | chr4.3:27268827-27268846 | MS.gene26465:CDS | 40.0% |
| ! | ACTTCACATCTGCCATTTGT+TGG | + | chr4.3:27269549-27269568 | None:intergenic | 40.0% |
| ! | CTGGGCAAATGCTCTTATTT+CGG | - | chr4.3:27268096-27268115 | MS.gene26465:CDS | 40.0% |
| ! | GAATGCATTCTCCTTTTCTG+TGG | + | chr4.3:27267480-27267499 | None:intergenic | 40.0% |
| ! | TCAAGTCTGAAACCTTCCAT+TGG | + | chr4.3:27268729-27268748 | None:intergenic | 40.0% |
| ! | TTTTCACCCTTCTCCCTTTT+CGG | - | chr4.3:27269435-27269454 | MS.gene26465:intron | 40.0% |
| !!! | GATTTTTTCCTCCAATGCCA+TGG | + | chr4.3:27266752-27266771 | None:intergenic | 40.0% |
| ACTTGTCTGATGTAAGTGGG+AGG | - | chr4.3:27268260-27268279 | MS.gene26465:CDS | 45.0% | |
| AGCTCAGGACATGTACTCTA+TGG | - | chr4.3:27268177-27268196 | MS.gene26465:CDS | 45.0% | |
| ATAACACCTTGCTAGCTCCA+TGG | + | chr4.3:27268002-27268021 | None:intergenic | 45.0% | |
| CAATGGTCCAGATTGCTTAG+AGG | - | chr4.3:27268636-27268655 | MS.gene26465:CDS | 45.0% | |
| CACACAACTTACAATAGCCC+AGG | - | chr4.3:27269272-27269291 | MS.gene26465:intron | 45.0% | |
| CATCAAGCCGATACTCTTCT+GGG | + | chr4.3:27267816-27267835 | None:intergenic | 45.0% | |
| CCACAAATGCATCAATGGCA+AGG | - | chr4.3:27268872-27268891 | MS.gene26465:CDS | 45.0% | |
| CCTTGCCATTGATGCATTTG+TGG | + | chr4.3:27268875-27268894 | None:intergenic | 45.0% | |
| CGAGGAAGTTGCATTTGCTT+TGG | - | chr4.3:27268822-27268841 | MS.gene26465:CDS | 45.0% | |
| CTAGAAACCGAAAAGGGAGA+AGG | + | chr4.3:27269445-27269464 | None:intergenic | 45.0% | |
| CTCCAACAGGAGAATCAATG+AGG | + | chr4.3:27267118-27267137 | None:intergenic | 45.0% | |
| CTTGTCTGATGTAAGTGGGA+GGG | - | chr4.3:27268261-27268280 | MS.gene26465:CDS | 45.0% | |
| GATGATGAGGCTATCTCTTC+TGG | - | chr4.3:27268070-27268089 | MS.gene26465:CDS | 45.0% | |
| GGAACTTGAGATACGAAAGG+AGG | - | chr4.3:27267529-27267548 | MS.gene26465:CDS | 45.0% | |
| GGACAAAAAGAACTCGTGTG+AGG | - | chr4.3:27269347-27269366 | MS.gene26465:intron | 45.0% | |
| GGTGAGAAAAGAGACAGGTA+TGG | - | chr4.3:27267718-27267737 | MS.gene26465:CDS | 45.0% | |
| GTACATGTCCTGAGCTTCTA+TGG | + | chr4.3:27268173-27268192 | None:intergenic | 45.0% | |
| GTCCCCAATAGATTCCTCTT+TGG | + | chr4.3:27267396-27267415 | None:intergenic | 45.0% | |
| GTGATGCATCTGCATACTGA+CGG | + | chr4.3:27267568-27267587 | None:intergenic | 45.0% | |
| TCATCAAGCCGATACTCTTC+TGG | + | chr4.3:27267817-27267836 | None:intergenic | 45.0% | |
| TGAATCACAAGCCATGGCAT+TGG | - | chr4.3:27266738-27266757 | MS.gene26465:CDS | 45.0% | |
| TGACCTTGGTGAGACAAATC+AGG | - | chr4.3:27268309-27268328 | MS.gene26465:CDS | 45.0% | |
| TGAGATACGAAAGGAGGAGA+TGG | - | chr4.3:27267535-27267554 | MS.gene26465:CDS | 45.0% | |
| TGCCAACAGCATTGCAAAGA+AGG | - | chr4.3:27269518-27269537 | MS.gene26465:CDS | 45.0% | |
| TGGTGAGACAAATCAGGAGA+TGG | - | chr4.3:27268315-27268334 | MS.gene26465:CDS | 45.0% | |
| TGGTTCTCCTCTAAGCAATC+TGG | + | chr4.3:27268646-27268665 | None:intergenic | 45.0% | |
| TGTATGGTGAAACAGCATCC+AGG | - | chr4.3:27267927-27267946 | MS.gene26465:CDS | 45.0% | |
| ! | CGAGTATCCCAGAAGAGTAT+CGG | - | chr4.3:27267806-27267825 | MS.gene26465:CDS | 45.0% |
| ! | GATATGCAACTGAAGGTGTG+CGG | + | chr4.3:27268981-27269000 | None:intergenic | 45.0% |
| ! | GTCATGCTGATTACTCTCAC+CGG | + | chr4.3:27269016-27269035 | None:intergenic | 45.0% |
| ! | TCTCCTGATTTGTCTCACCA+AGG | + | chr4.3:27268315-27268334 | None:intergenic | 45.0% |
| !! | AAAAGATCTCCTGGTCTTGC+AGG | - | chr4.3:27267665-27267684 | MS.gene26465:CDS | 45.0% |
| !! | CGAAATAAGAGCATTTGCCC+AGG | + | chr4.3:27268098-27268117 | None:intergenic | 45.0% |
| !! | GTCCTCATTGATTCTCCTGT+TGG | - | chr4.3:27267113-27267132 | MS.gene26465:CDS | 45.0% |
| AACAGCATCCAGGTTGTCAC+AGG | - | chr4.3:27267937-27267956 | MS.gene26465:CDS | 50.0% | |
| AATCTCAGCCTGTGACAACC+TGG | + | chr4.3:27267948-27267967 | None:intergenic | 50.0% | |
| ACAAGTCCATGGAGCTAGCA+AGG | - | chr4.3:27267993-27268012 | MS.gene26465:CDS | 50.0% | |
| ACACAGCTTAGAGGCTGCAA+AGG | + | chr4.3:27267215-27267234 | None:intergenic | 50.0% | |
| AGGCTATCTCTTCTGGATCC+TGG | - | chr4.3:27268077-27268096 | MS.gene26465:CDS | 50.0% | |
| CTCTCACCGGACTTATCATC+TGG | + | chr4.3:27269003-27269022 | None:intergenic | 50.0% | |
| CTGCTCTTCAACCATGGCTT+TGG | + | chr4.3:27269217-27269236 | None:intergenic | 50.0% | |
| GAAACGGAGTCTCTGACACT+CGG | + | chr4.3:27267636-27267655 | None:intergenic | 50.0% | |
| GGAACGGTGAGAAAAGAGAC+AGG | - | chr4.3:27267713-27267732 | MS.gene26465:CDS | 50.0% | |
| GGCTATCTCTTCTGGATCCT+GGG | - | chr4.3:27268078-27268097 | MS.gene26465:CDS | 50.0% | |
| GTCTTGCAGGTCCAGTGAAT+AGG | - | chr4.3:27267678-27267697 | MS.gene26465:CDS | 50.0% | |
| ! | ATCACAAGCCATGGCATTGG+AGG | - | chr4.3:27266741-27266760 | MS.gene26465:CDS | 50.0% |
| TTCACTGGACCTGCAAGACC+AGG | + | chr4.3:27267677-27267696 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27266737 | 27269587 | 27266737 | ID=MS.gene26465 |
| chr4.3 | mRNA | 27266737 | 27269587 | 27266737 | ID=MS.gene26465.t1;Parent=MS.gene26465 |
| chr4.3 | exon | 27269489 | 27269587 | 27269489 | ID=MS.gene26465.t1.exon1;Parent=MS.gene26465.t1 |
| chr4.3 | CDS | 27269489 | 27269587 | 27269489 | ID=cds.MS.gene26465.t1;Parent=MS.gene26465.t1 |
| chr4.3 | exon | 27266912 | 27269286 | 27266912 | ID=MS.gene26465.t1.exon2;Parent=MS.gene26465.t1 |
| chr4.3 | CDS | 27266912 | 27269286 | 27266912 | ID=cds.MS.gene26465.t1;Parent=MS.gene26465.t1 |
| chr4.3 | exon | 27266737 | 27266797 | 27266737 | ID=MS.gene26465.t1.exon3;Parent=MS.gene26465.t1 |
| chr4.3 | CDS | 27266737 | 27266797 | 27266737 | ID=cds.MS.gene26465.t1;Parent=MS.gene26465.t1 |
| Gene Sequence |
| Protein sequence |
